View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9077_low_33 (Length: 479)

Name: NF9077_low_33
Description: NF9077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9077_low_33
NF9077_low_33
[»] chr7 (41 HSPs)
chr7 (118-461)||(32853507-32853850)
chr7 (15-117)||(7389389-7389491)
chr7 (15-118)||(38267039-38267142)
chr7 (15-117)||(8080381-8080483)
chr7 (15-117)||(36361911-36362013)
chr7 (15-118)||(19329841-19329944)
chr7 (15-118)||(35137532-35137635)
chr7 (15-117)||(3434562-3434664)
chr7 (15-117)||(36362026-36362128)
chr7 (15-117)||(38837217-38837319)
chr7 (15-117)||(40957707-40957809)
chr7 (15-114)||(3783998-3784097)
chr7 (15-117)||(4999512-4999614)
chr7 (15-117)||(19436185-19436287)
chr7 (15-116)||(32951491-32951592)
chr7 (15-118)||(8238211-8238315)
chr7 (15-114)||(3694370-3694469)
chr7 (15-117)||(36208173-36208275)
chr7 (15-118)||(21234400-21234503)
chr7 (15-117)||(38044197-38044299)
chr7 (23-117)||(46374808-46374902)
chr7 (15-117)||(11044188-11044280)
chr7 (15-117)||(22343361-22343463)
chr7 (15-117)||(41915741-41915843)
chr7 (15-112)||(35522881-35522978)
chr7 (51-117)||(10343597-10343663)
chr7 (15-117)||(18207180-18207281)
chr7 (61-118)||(31735883-31735940)
chr7 (15-118)||(39255922-39256024)
chr7 (15-117)||(40846111-40846213)
chr7 (15-117)||(46033799-46033901)
chr7 (15-118)||(32564424-32564527)
chr7 (17-117)||(7727906-7728006)
chr7 (15-117)||(26296644-26296746)
chr7 (15-117)||(35468853-35468955)
chr7 (48-117)||(45223042-45223111)
chr7 (49-91)||(32029751-32029792)
chr7 (15-112)||(2318241-2318338)
chr7 (15-76)||(16374822-16374883)
chr7 (49-118)||(42538338-42538406)
chr7 (49-117)||(24000920-24000987)
[»] chr6 (24 HSPs)
chr6 (15-114)||(22880656-22880755)
chr6 (15-118)||(32869677-32869780)
chr6 (15-118)||(17598553-17598656)
chr6 (15-117)||(6209463-6209565)
chr6 (15-117)||(11427616-11427720)
chr6 (15-118)||(31109398-31109501)
chr6 (15-117)||(29857827-29857929)
chr6 (15-117)||(31976248-31976350)
chr6 (15-118)||(15508022-15508125)
chr6 (15-114)||(23128125-23128224)
chr6 (15-117)||(15990040-15990142)
chr6 (15-117)||(30341358-30341460)
chr6 (15-113)||(28536486-28536582)
chr6 (15-117)||(31110759-31110859)
chr6 (15-118)||(31953028-31953131)
chr6 (15-117)||(15832577-15832679)
chr6 (15-118)||(4231547-4231650)
chr6 (15-116)||(946377-946478)
chr6 (49-117)||(12732482-12732550)
chr6 (52-117)||(22422053-22422118)
chr6 (49-91)||(7273269-7273310)
chr6 (49-91)||(7367674-7367715)
chr6 (49-91)||(26669943-26669984)
chr6 (49-117)||(9698241-9698308)
[»] chr3 (40 HSPs)
chr3 (15-118)||(53982010-53982113)
chr3 (15-118)||(33644199-33644302)
chr3 (15-117)||(49607414-49607516)
chr3 (15-112)||(52629305-52629402)
chr3 (15-117)||(8076393-8076495)
chr3 (15-117)||(27714889-27714991)
chr3 (15-117)||(54868893-54868995)
chr3 (15-116)||(31456690-31456791)
chr3 (15-117)||(17470405-17470507)
chr3 (15-117)||(11095353-11095453)
chr3 (15-118)||(26141530-26141633)
chr3 (15-113)||(48587089-48587187)
chr3 (15-117)||(33118849-33118951)
chr3 (15-118)||(20764913-20765016)
chr3 (15-112)||(26754700-26754797)
chr3 (15-117)||(14623837-14623939)
chr3 (32-117)||(36707439-36707524)
chr3 (15-118)||(30801731-30801834)
chr3 (15-117)||(11347920-11348022)
chr3 (15-117)||(24699952-24700054)
chr3 (15-117)||(41189762-41189864)
chr3 (15-117)||(51419358-51419460)
chr3 (15-116)||(13898053-13898154)
chr3 (15-117)||(9562999-9563101)
chr3 (15-117)||(11907371-11907473)
chr3 (15-117)||(35536626-35536728)
chr3 (15-117)||(8956762-8956864)
chr3 (15-117)||(47531865-47531967)
chr3 (15-118)||(45058551-45058653)
chr3 (48-117)||(21746212-21746283)
chr3 (15-95)||(36331327-36331407)
chr3 (15-117)||(41080709-41080809)
chr3 (15-117)||(48375704-48375806)
chr3 (49-117)||(35965806-35965874)
chr3 (47-91)||(52629951-52629994)
chr3 (49-91)||(46941178-46941219)
chr3 (49-91)||(53581792-53581833)
chr3 (15-119)||(25407145-25407250)
chr3 (15-112)||(42823116-42823213)
chr3 (49-89)||(40480874-40480913)
[»] chr1 (37 HSPs)
chr1 (17-117)||(2581915-2582015)
chr1 (15-118)||(9474874-9474977)
chr1 (15-117)||(3000319-3000421)
chr1 (15-118)||(27564733-27564836)
chr1 (15-118)||(47452318-47452421)
chr1 (19-118)||(48716284-48716383)
chr1 (15-117)||(38595154-38595256)
chr1 (17-117)||(51898683-51898783)
chr1 (15-117)||(8346386-8346488)
chr1 (19-117)||(38632323-38632421)
chr1 (15-117)||(50630458-50630560)
chr1 (15-114)||(44548374-44548473)
chr1 (15-117)||(32813247-32813349)
chr1 (18-118)||(37649197-37649297)
chr1 (15-117)||(43132-43234)
chr1 (15-117)||(41758805-41758907)
chr1 (17-116)||(11152378-11152476)
chr1 (15-118)||(50590998-50591101)
chr1 (15-117)||(5958998-5959100)
chr1 (19-117)||(23597093-23597191)
chr1 (15-87)||(13414791-13414863)
chr1 (19-114)||(26274435-26274530)
chr1 (15-117)||(49811525-49811627)
chr1 (17-118)||(3302533-3302634)
chr1 (15-110)||(26440741-26440836)
chr1 (15-118)||(41608491-41608594)
chr1 (15-97)||(45044558-45044640)
chr1 (19-112)||(44453984-44454077)
chr1 (15-117)||(37926436-37926538)
chr1 (28-91)||(750239-750301)
chr1 (15-118)||(47748442-47748544)
chr1 (49-91)||(4401453-4401494)
chr1 (49-91)||(7447950-7447991)
chr1 (49-91)||(24769433-24769474)
chr1 (22-92)||(44334175-44334245)
chr1 (49-91)||(50448194-50448235)
chr1 (17-74)||(48489343-48489400)
[»] chr8 (38 HSPs)
chr8 (15-118)||(15197332-15197435)
chr8 (15-117)||(12831047-12831149)
chr8 (15-118)||(504119-504222)
chr8 (15-117)||(14547922-14548024)
chr8 (15-118)||(23122595-23122698)
chr8 (15-118)||(34012294-34012397)
chr8 (15-118)||(40423941-40424044)
chr8 (15-117)||(10284629-10284731)
chr8 (15-117)||(44507085-44507187)
chr8 (17-117)||(37038479-37038579)
chr8 (15-117)||(1179938-1180040)
chr8 (15-116)||(5957831-5957932)
chr8 (15-118)||(15048180-15048282)
chr8 (15-98)||(8841430-8841513)
chr8 (15-112)||(10621085-10621182)
chr8 (15-118)||(43414579-43414682)
chr8 (15-117)||(16383377-16383479)
chr8 (15-118)||(20074940-20075035)
chr8 (15-117)||(4854861-4854963)
chr8 (15-116)||(9122196-9122287)
chr8 (15-117)||(34307216-34307318)
chr8 (15-117)||(42221515-42221617)
chr8 (34-117)||(14055609-14055692)
chr8 (15-117)||(17443825-17443927)
chr8 (15-117)||(24307791-24307893)
chr8 (15-117)||(30479472-30479574)
chr8 (54-117)||(24307629-24307692)
chr8 (15-117)||(15258927-15259029)
chr8 (15-117)||(16056399-16056501)
chr8 (15-117)||(32032725-32032826)
chr8 (15-118)||(38229428-38229530)
chr8 (49-91)||(30912496-30912537)
chr8 (62-117)||(25838197-25838252)
chr8 (28-91)||(29705466-29705528)
chr8 (49-91)||(2547121-2547162)
chr8 (48-118)||(30183906-30183976)
chr8 (49-98)||(42668905-42668953)
chr8 (49-117)||(11582891-11582958)
[»] chr5 (32 HSPs)
chr5 (15-114)||(18520882-18520981)
chr5 (15-118)||(40145406-40145509)
chr5 (15-117)||(2740274-2740376)
chr5 (15-117)||(36732940-36733042)
chr5 (15-118)||(33149636-33149739)
chr5 (15-117)||(13811652-13811754)
chr5 (17-118)||(14831813-14831914)
chr5 (15-118)||(35785198-35785301)
chr5 (19-118)||(42414304-42414403)
chr5 (15-118)||(28177774-28177877)
chr5 (15-117)||(15409608-15409710)
chr5 (15-117)||(35943890-35943992)
chr5 (17-117)||(31008988-31009088)
chr5 (15-117)||(6679698-6679800)
chr5 (15-119)||(26720514-26720618)
chr5 (15-119)||(26990263-26990367)
chr5 (15-117)||(3921263-3921365)
chr5 (15-116)||(36875610-36875702)
chr5 (15-117)||(2252166-2252268)
chr5 (15-117)||(33825322-33825424)
chr5 (26-117)||(41470425-41470516)
chr5 (15-118)||(6259999-6260102)
chr5 (15-117)||(9603813-9603915)
chr5 (15-117)||(39688895-39688997)
chr5 (17-117)||(20073516-20073616)
chr5 (54-112)||(10356639-10356698)
chr5 (19-69)||(31132392-31132442)
chr5 (49-91)||(33801594-33801635)
chr5 (19-116)||(16327902-16327999)
chr5 (15-73)||(21370048-21370106)
chr5 (16-117)||(38296203-38296304)
chr5 (49-117)||(2614557-2614624)
[»] chr4 (37 HSPs)
chr4 (15-118)||(11511460-11511563)
chr4 (15-117)||(48183047-48183149)
chr4 (15-117)||(50052426-50052528)
chr4 (15-118)||(3481653-3481756)
chr4 (15-118)||(6034043-6034146)
chr4 (15-117)||(480445-480547)
chr4 (15-117)||(41236347-41236449)
chr4 (15-117)||(42044365-42044467)
chr4 (19-118)||(54473535-54473634)
chr4 (15-117)||(29234243-29234345)
chr4 (15-117)||(29239886-29239988)
chr4 (15-118)||(31910191-31910294)
chr4 (15-117)||(24995105-24995207)
chr4 (17-118)||(50526171-50526272)
chr4 (15-117)||(23608235-23608337)
chr4 (15-112)||(53352564-53352660)
chr4 (15-117)||(29977885-29977987)
chr4 (15-118)||(40574778-40574881)
chr4 (15-117)||(19670714-19670816)
chr4 (15-78)||(41823921-41823984)
chr4 (15-117)||(47986208-47986310)
chr4 (15-117)||(50813890-50813992)
chr4 (15-117)||(55475191-55475293)
chr4 (16-109)||(28480267-28480360)
chr4 (16-109)||(28481142-28481235)
chr4 (16-109)||(28482017-28482110)
chr4 (15-99)||(17983741-17983825)
chr4 (15-117)||(32766958-32767060)
chr4 (52-117)||(29547994-29548059)
chr4 (52-117)||(55079749-55079814)
chr4 (49-117)||(47104544-47104612)
chr4 (15-117)||(8343161-8343263)
chr4 (15-117)||(48647724-48647826)
chr4 (52-118)||(18924530-18924596)
chr4 (15-109)||(29589738-29589831)
chr4 (15-117)||(44536744-44536845)
chr4 (49-90)||(33703266-33703306)
[»] chr2 (36 HSPs)
chr2 (15-114)||(28863458-28863557)
chr2 (15-117)||(9058480-9058582)
chr2 (15-117)||(33436098-33436200)
chr2 (15-118)||(13438342-13438445)
chr2 (15-117)||(7465733-7465835)
chr2 (15-117)||(10249380-10249482)
chr2 (15-117)||(17473020-17473122)
chr2 (17-117)||(32505648-32505748)
chr2 (15-118)||(40701477-40701580)
chr2 (15-117)||(5574486-5574588)
chr2 (15-117)||(30915463-30915565)
chr2 (15-114)||(19930818-19930917)
chr2 (15-118)||(27864703-27864806)
chr2 (15-118)||(28381653-28381756)
chr2 (15-118)||(40613900-40614003)
chr2 (15-117)||(20700815-20700917)
chr2 (17-118)||(4060684-4060785)
chr2 (15-117)||(38882809-38882913)
chr2 (15-117)||(38273140-38273242)
chr2 (15-117)||(26891502-26891604)
chr2 (15-117)||(42257193-42257295)
chr2 (15-111)||(3439985-3440081)
chr2 (19-117)||(2533124-2533221)
chr2 (15-118)||(17820002-17820105)
chr2 (19-118)||(43490120-43490219)
chr2 (15-117)||(33436211-33436313)
chr2 (15-117)||(38732354-38732456)
chr2 (15-99)||(2997485-2997569)
chr2 (15-117)||(36168836-36168938)
chr2 (15-116)||(41575138-41575240)
chr2 (15-117)||(45097733-45097835)
chr2 (48-117)||(17823784-17823853)
chr2 (15-101)||(13365369-13365455)
chr2 (17-74)||(3737986-3738043)
chr2 (49-91)||(16096873-16096914)
chr2 (49-91)||(42849793-42849834)
[»] scaffold1268 (1 HSPs)
scaffold1268 (15-118)||(927-1030)
[»] scaffold1267 (1 HSPs)
scaffold1267 (15-118)||(927-1030)
[»] scaffold0321 (1 HSPs)
scaffold0321 (15-117)||(10107-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (15-117)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-101)||(152514-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (15-74)||(17097-17156)
[»] scaffold0119 (1 HSPs)
scaffold0119 (49-91)||(810-851)
[»] scaffold0385 (1 HSPs)
scaffold0385 (47-91)||(11374-11417)


Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 118 - 461
Target Start/End: Complemental strand, 32853850 - 32853507
Alignment:
Q  118 agttctaaatgggaaaggcaagacaaatcaataaacaaataaatgaacaggtattttatttagtctaaagttcattcaacaagagaaaaatacatcaaaa 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32853850 agttctaaataggaaaggcaagacaaatcaataaacaaataaataaacaggtattttatttagtctaaagttcattcaacaacagaaaaatacatcaaaa 32853751  T
Q  218 agtttgattgaactcaccaaaactgcaaaggtagaaaactaagaactcattgtgaaaatctcaatgaacccatcaaacattacctgcatatatttcaaaa 317  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32853750 agtttgattgaactcaccaaaactgcaaaggtagaaaactcagaactcattgtgaaaatctcaatgaacccatccaacattacctgcatatatttcaaaa 32853651  T
Q  318 tcacaatattttacaataatattagatctattttatttaaaataaaaaacagaaacccctcctactcaatatcaaaatcatgcagggtgtagaagttaga 417  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32853650 tcacaatattttacaataatattagatatattttatttaaaataaaaaacagaaacccctcctactcaatatcaaaatcatgcagggtgtagaagttaga 32853551  T
Q  418 actgtggatcaagaacaaagtacgtacagtggggattgttactg 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32853550 actgtggatcaagaacaaagtacgtacagtggggattgttactg 32853507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 7389491 - 7389389
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7389491 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 7389392  T
Q  115 ctc 117  Q
    |||    
T  7389391 ctc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 38267142 - 38267039
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  38267142 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcatta 38267043  T
Q  115 ctca 118  Q
    ||||    
T  38267042 ctca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 8080381 - 8080483
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  8080381 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 8080480  T
Q  115 ctc 117  Q
    |||    
T  8080481 ctc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 36361911 - 36362013
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  36361911 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatta 36362010  T
Q  115 ctc 117  Q
    |||    
T  36362011 ctc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 19329944 - 19329841
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  19329944 agagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatta 19329845  T
Q  115 ctca 118  Q
    ||||    
T  19329844 ctca 19329841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 35137635 - 35137532
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  35137635 agagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcatta 35137536  T
Q  115 ctca 118  Q
    ||||    
T  35137535 ctca 35137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 3434664 - 3434562
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3434664 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 3434565  T
Q  115 ctc 117  Q
    |||    
T  3434564 ctc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 36362128 - 36362026
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  36362128 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcatta 36362029  T
Q  115 ctc 117  Q
    |||    
T  36362028 ctc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 38837319 - 38837217
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||||||    
T  38837319 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcatta 38837220  T
Q  115 ctc 117  Q
    |||    
T  38837219 ctc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 40957809 - 40957707
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40957809 agagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcatta 40957710  T
Q  115 ctc 117  Q
    |||    
T  40957709 ctc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 3784097 - 3783998
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  3784097 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 4999512 - 4999614
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  4999512 agagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 4999611  T
Q  115 ctc 117  Q
    |||    
T  4999612 ctc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 19436185 - 19436287
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  19436185 agagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcatta 19436284  T
Q  115 ctc 117  Q
    |||    
T  19436285 ctc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 32951491 - 32951592
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||| ||||  ||||||| || ||||| |||||||||||||||||    
T  32951491 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcatta 32951590  T
Q  115 ct 116  Q
    ||    
T  32951591 ct 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 8238315 - 8238211
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccaccta-agggtgtctatgtatcatt 113  Q
    ||||||||||| ||||||||||||||   ||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||     
T  8238315 agagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcata 8238216  T
Q  114 actca 118  Q
    |||||    
T  8238215 actca 8238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 3694469 - 3694370
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||| |||  |||||||| ||||||||||||| ||| ||||||||    
T  3694469 agagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 36208275 - 36208173
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||||| |||||| |||||| || ||||||  ||||||||||||||||| || |||||| ||||||||||||||||||||||||| |    
T  36208275 agagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataa 36208176  T
Q  115 ctc 117  Q
    |||    
T  36208175 ctc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 21234503 - 21234400
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||||||||||||||| |  ||| |||||||||| | ||||||||| ||||||||| |||||||| ||||||||| |||||||||||||| |    
T  21234503 agagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataa 21234404  T
Q  115 ctca 118  Q
    ||||    
T  21234403 ctca 21234400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 38044299 - 38044197
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || |||| ||||||| |||||||||| |||||| | |||||||||||||||||||||| |||||||||| |    
T  38044299 agagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 38044200  T
Q  115 ctc 117  Q
    |||    
T  38044199 ctc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  23 tgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||||  ||| | |||||||||| |||||||||||||| |||| |||| ||||||||||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 11044280 - 11044188
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| |||||||||||||| ||||||||||||||||          |||||||||||  ||||||||||||||||||||||||||||||||||    
T  11044280 agagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatta 11044191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 22343463 - 22343361
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   ||   || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  22343463 agagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 22343364  T
Q  115 ctc 117  Q
    |||    
T  22343363 ctc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 41915843 - 41915741
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| |||||||| |||||||| | |||||||||||||||||||||| |||||||||| |    
T  41915843 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 41915744  T
Q  115 ctc 117  Q
    |||    
T  41915743 ctc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 35522978 - 35522881
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    |||||||||||||||||||||| |||   || | |||||||||| |||||||||||||| |||  |||||||||||| ||||| ||||||||||||||    
T  35522978 agagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  51 gtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||| |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 18207281 - 18207180
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||| | |||| | |||||| ||| |||||| ||||||||||   |||||||||||||||||| |||||||||||||| |    
T  18207281 agagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataa 18207183  T
Q  115 ctc 117  Q
    |||    
T  18207182 ctc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 31735940 - 31735883
Alignment:
Q  61 tttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactca 31735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 39255922 - 39256024
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| |||||| || |||| |||| | |||||||||| |||||| ||||| ||||   |||||||||||||||||| |||||||||||||| |    
T  39255922 agagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataa 39256020  T
Q  115 ctca 118  Q
    ||||    
T  39256021 ctca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 40846111 - 40846213
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||  |||||||||||||   | ||||| ||| ||| |||||||||| |||||| | |||||||||||||||||| ||| |||||||||| |    
T  40846111 agagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataa 40846210  T
Q  115 ctc 117  Q
    |||    
T  40846211 ctc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 46033799 - 46033901
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| | ||||||||||| || |  ||||| |||||||||| |||| ||||||||| |||| |||||||||||||||||  | |||||||||||| |    
T  46033799 agagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataa 46033898  T
Q  115 ctc 117  Q
    |||    
T  46033899 ctc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 32564424 - 32564527
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||  |||||||||||||   |  | || ||||||| ||||||||||||||||| | |||||||||||||||||  ||| |||||||||| |    
T  32564424 agagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataa 32564523  T
Q  115 ctca 118  Q
    ||||    
T  32564524 ctca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7728006 - 7727906
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    ||||||||| ||||||||||||||   |||| || ||||||| |||| ||||  ||||||   ||||||| |||||||||||||| |||||||||| |||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataact 7727907  T
Q  117 c 117  Q
    |    
T  7727906 c 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 26296746 - 26296644
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| || |||||||||||||||   || | |||| ||||| |||| ||||| ||| |||| || ||||| ||||||||| |||||||||||||| |    
T  26296746 agagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataa 26296647  T
Q  115 ctc 117  Q
    |||    
T  26296646 ctc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 35468853 - 35468955
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| |||||| |||||| | ||   || | | ||| |||| |||||||||||||   |||||||||| |||||| ||||||||||||||||    
T  35468853 agagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcatta 35468952  T
Q  115 ctc 117  Q
    |||    
T  35468953 ctc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 45223111 - 45223042
Alignment:
Q  48 tacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||| |||||||| | |||  |||| ||||||||||||||||| ||| ||| |||||||||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactc 45223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 32029792 - 32029751
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  32029792 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 2318241 - 2318338
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||||||| ||||| ||  |||||| |||||| ||  |||||| |||||||||||||||||   |||| |||||||||| || |||  |||||||||    
T  2318241 agagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 16374822 - 16374883
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaa 76  Q
    |||||| ||||||||||| | | ||| |||||| |||||||||| |||||||||| ||||||    
T  16374822 agagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 42538406 - 42538338
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    ||||||||||||||||| ||||||| |||| |||||||||||| | |||  ||  |||||||||||||||    
T  42538406 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactca 42538338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 24000987 - 24000920
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||| ||||||| |||| |||||||||||| | |||  ||  ||||||||||||||    
T  24000987 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactc 24000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 22880656 - 22880755
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22880656 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 32869780 - 32869677
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  32869780 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcttta 32869681  T
Q  115 ctca 118  Q
    ||||    
T  32869680 ctca 32869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 17598656 - 17598553
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  17598656 agagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 17598557  T
Q  115 ctca 118  Q
    ||||    
T  17598556 ctca 17598553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 6209463 - 6209565
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||| ||||||||||| |||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6209463 agagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcatta 6209562  T
Q  115 ctc 117  Q
    |||    
T  6209563 ctc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 11427720 - 11427616
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccaccta--agggtgtctatgtatcat 112  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||    
T  11427720 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcat 11427621  T
Q  113 tactc 117  Q
    |||||    
T  11427620 tactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 31109398 - 31109501
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||| |||||||||  ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||  |||||||    
T  31109398 agagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcatta 31109497  T
Q  115 ctca 118  Q
    ||||    
T  31109498 ctca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 29857929 - 29857827
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||||||| |||  ||||||||||| |||| ||||||||||||||||||    
T  29857929 agagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatta 29857830  T
Q  115 ctc 117  Q
    |||    
T  29857829 ctc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 31976350 - 31976248
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||| |  ||||| |||||||||| |||||||||||||| |||| || ||||||||||||||| |||||||||||||| |    
T  31976350 agagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataa 31976251  T
Q  115 ctc 117  Q
    |||    
T  31976250 ctc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 15508022 - 15508125
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  15508022 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 15508121  T
Q  115 ctca 118  Q
    ||||    
T  15508122 ctca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 23128125 - 23128224
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||  ||||||  ||| ||| ||||||||| ||||||||    
T  23128125 agagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 15990040 - 15990142
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  15990040 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 15990139  T
Q  115 ctc 117  Q
    |||    
T  15990140 ctc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 30341358 - 30341460
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  30341358 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 30341457  T
Q  115 ctc 117  Q
    |||    
T  30341458 ctc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 28536486 - 28536582
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 113  Q
    |||||||||||||||||| ||||||| | ||||  ||||||||| ||||||||||||||||| |  ||||||||||||||||| ||| |||||||||||    
T  28536486 agagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 31110759 - 31110859
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||| ||||||  |||  ||||||||||| ||||||| |  |||||||| |||||||||||||||||| |||||||||||||| |    
T  31110759 agagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataa 31110856  T
Q  115 ctc 117  Q
    |||    
T  31110857 ctc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 31953028 - 31953131
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||| | ||||| | |||  || ||||||| |||| |||||||||||| | |||||||||||||||||| ||||||| ||||||||    
T  31953028 agagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcatta 31953127  T
Q  115 ctca 118  Q
    ||||    
T  31953128 ctca 31953131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 15832679 - 15832577
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||  |||||| || ||| ||||||||||||||| | ||||||||||||||||||   | ||||| ||||||| ||||||||||||||||||    
T  15832679 agagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcatta 15832580  T
Q  115 ctc 117  Q
    |||    
T  15832579 ctc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 4231650 - 4231547
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | |||||||||| ||||||||||||| ||| | |||||||||||||||| | ||| |||| ||||| |    
T  4231650 agagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataa 4231551  T
Q  115 ctca 118  Q
    ||||    
T  4231550 ctca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 946478 - 946377
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||| | ||||| |   |||||||| |||||||| ||||| || |||||||||| |||||||  ||||||||| |||||||||||| |||    
T  946478 agagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgtta 946379  T
Q  115 ct 116  Q
    ||    
T  946378 ct 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 12732550 - 12732482
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||||| ||||||||||||||||| || | ||||||||| ||||  |||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 22422053 - 22422118
Alignment:
Q  52 tgtcagaattttgtgtgggtgtcaaagag-tgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||||||||| || ||||||| ||| | ||||||||||||||| |||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaa-gagatctattgccacctaaggatgtctatgtatcattactc 22422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 7273310 - 7273269
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  7273310 acgtgtcagaattttgtgtgggtgt-aaagagtgtattaccac 7273269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 7367674 - 7367715
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  7367674 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 26669984 - 26669943
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  26669984 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 26669943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 9698308 - 9698241
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||| ||||||| |||| |||||||||||| | |||  ||  ||||||||||||||    
T  9698308 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactc 9698241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 53982113 - 53982010
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53982113 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 53982014  T
Q  115 ctca 118  Q
    ||||    
T  53982013 ctca 53982010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 33644302 - 33644199
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  33644302 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcatta 33644203  T
Q  115 ctca 118  Q
    ||||    
T  33644202 ctca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 49607516 - 49607414
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49607516 agagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 49607417  T
Q  115 ctc 117  Q
    |||    
T  49607416 ctc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 52629402 - 52629305
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52629402 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 8076495 - 8076393
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  8076495 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcatta 8076396  T
Q  115 ctc 117  Q
    |||    
T  8076395 ctc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 27714889 - 27714991
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  27714889 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatta 27714988  T
Q  115 ctc 117  Q
    |||    
T  27714989 ctc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 54868893 - 54868995
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  54868893 agagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 54868992  T
Q  115 ctc 117  Q
    |||    
T  54868993 ctc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 31456791 - 31456690
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  31456791 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcatta 31456692  T
Q  115 ct 116  Q
    ||    
T  31456691 ct 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 17470507 - 17470405
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||||||| ||||||||||||||||||    
T  17470507 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcatta 17470408  T
Q  115 ctc 117  Q
    |||    
T  17470407 ctc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 11095353 - 11095453
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| || |||||||| ||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11095353 agagaaagtgtgtttatgcggggtacg--tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 11095450  T
Q  115 ctc 117  Q
    |||    
T  11095451 ctc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 26141530 - 26141633
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| |||||||  ||||| |||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||| |    
T  26141530 agagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataa 26141629  T
Q  115 ctca 118  Q
    ||||    
T  26141630 ctca 26141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 48587089 - 48587187
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 113  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  48587089 agagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 33118849 - 33118951
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| || || ||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |    
T  33118849 agagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataa 33118948  T
Q  115 ctc 117  Q
    |||    
T  33118949 ctc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 20764913 - 20765016
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| ||||||||  ||| | |||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||| |||| |    
T  20764913 agagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataa 20765012  T
Q  115 ctca 118  Q
    ||||    
T  20765013 ctca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 26754797 - 26754700
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||||| ||||||||||||||||||  ||||| || ||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||| |||||    
T  26754797 agagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 14623837 - 14623939
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| | ||||| | |||  || ||||||| |||| |||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  14623837 agagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcatta 14623936  T
Q  115 ctc 117  Q
    |||    
T  14623937 ctc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 36707439 - 36707524
Alignment:
Q  32 gcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||| ||| ||| ||||||||||||| |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 30801731 - 30801834
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||||||||| |||||||   ||||||| ||||| | |||||||||||| |||||| |||||||  |||||||||||||||||||||||||     
T  30801731 agagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattg 30801830  T
Q  115 ctca 118  Q
    ||||    
T  30801831 ctca 30801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 11347920 - 11348022
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| ||| ||||||  ||| | |||||||||| |||||||||| ||||||||  ||||||| ||||||||| |||||||||||||| |    
T  11347920 agagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataa 11348019  T
Q  115 ctc 117  Q
    |||    
T  11348020 ctc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 24699952 - 24700054
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| |||| | |||||| |||| | ||||| |||| |||| |||||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  24699952 agagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcatta 24700051  T
Q  115 ctc 117  Q
    |||    
T  24700052 ctc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 41189762 - 41189864
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||| | |||||||| | |||| |||||||||||||   ||||||||||||||||| ||| |||||||||| |    
T  41189762 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataa 41189861  T
Q  115 ctc 117  Q
    |||    
T  41189862 ctc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 51419358 - 51419460
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||   ||| | |||||||||| |||||||||||||| ||||  ||||||| || |||||| |||||||||||||| |    
T  51419358 agagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataa 51419457  T
Q  115 ctc 117  Q
    |||    
T  51419458 ctc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 13898053 - 13898154
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| | ||||| | |||  |||||||||| |||| |||||||||||| | |||||||||||||||||| ||| ||| ||||||||    
T  13898053 agagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcatta 13898152  T
Q  115 ct 116  Q
    ||    
T  13898153 ct 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 9563101 - 9562999
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| |||||| || ||| ||||||||||||||||| |||| | ||| ||||||||  ||||||| || |||| ||||| ||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T
Q  115 ctc 117  Q
    |||    
T  9563001 ctc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 11907473 - 11907371
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||||||||||||   |||| || ||||||| ||||||||| ||||  | | |||||||| |||||||||||||||||||||||| |    
T  11907473 agagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataa 11907374  T
Q  115 ctc 117  Q
    |||    
T  11907373 ctc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 35536728 - 35536626
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||| |||||||||||||   ||||| | |||| |||||||| | |||| |||||||||||||  |||||||||||| ||||| ||||||||||||||||    
T  35536728 agaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcatta 35536629  T
Q  115 ctc 117  Q
    |||    
T  35536628 ctc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 8956864 - 8956762
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||| |||||||||||||   ||||| | |||  |||||||| | |||| ||||||||||||||  ||||||||||| ||||| ||||||||||||||||    
T  8956864 agaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcatta 8956765  T
Q  115 ctc 117  Q
    |||    
T  8956764 ctc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 47531967 - 47531865
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||| |   || | |||||||||| | |||||||| ||| |||  ||||||||||| |||||| |||||||||||||| |    
T  47531967 agagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataa 47531868  T
Q  115 ctc 117  Q
    |||    
T  47531867 ctc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 45058551 - 45058653
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||| | ||||||||||||||   ||   || ||||||| |||| |||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  45058551 agagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaagg-gtgtattgccacctaagggtgtttatgtatcataa 45058649  T
Q  115 ctca 118  Q
    ||||    
T  45058650 ctca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 21746212 - 21746283
Alignment:
Q  48 tacgtgtcagaattttgtgtggg--tgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||| |||||||||||  |||| | || ||||||||||||||||| ||| |||||||||||||||    
T  21746212 tacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactc 21746283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 36331327 - 36331407
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaa 95  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | ||| ||||||||||||    
T  36331327 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 41080809 - 41080709
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||||||||| ||| ||| | |||| || | ||||| ||||| ||||||||||||| |||| |||| || ||||| ||||||||||||||||    
T  41080809 agagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcatta 41080712  T
Q  115 ctc 117  Q
    |||    
T  41080711 ctc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 48375704 - 48375806
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||||||||||||  ||||| ||  |||||| |||||| ||| | |  | | |||||||| |||||||||||||||||| ||||| |    
T  48375704 agagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataa 48375803  T
Q  115 ctc 117  Q
    |||    
T  48375804 ctc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||||| |||| ||||||||||||||  ||||||  ||| ||||| ||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 52629951 - 52629994
Alignment:
Q  47 ctacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  52629951 ctacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 46941178 - 46941219
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  46941178 acgtgtcagaattttatgtgggtgt-aaagagtgtattgccac 46941219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 53581833 - 53581792
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  53581833 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 25407145 - 25407250
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaatttt-gtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 113  Q
    |||||||||||| ||||| ||| |||   |||  |||||||||| |||| ||||| ||||||| | || |||||||||||| || ||| |||||||||||    
T  25407145 agagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatt 25407244  T
Q  114 actcag 119  Q
    | ||||    
T  25407245 attcag 25407250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 42823213 - 42823116
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||||||| | ||| ||||||||||   |||| || ||||| | |||| |||||||||||| | ||||||| |||| ||| ||||| ||||||||||    
T  42823213 agagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 40480874 - 40480913
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgcc 89  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  40480874 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcc 40480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 2582015 - 2581915
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  117 c 117  Q
    |    
T  2581915 c 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 9474874 - 9474977
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9474874 agagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 9474973  T
Q  115 ctca 118  Q
    ||||    
T  9474974 ctca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 3000421 - 3000319
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  3000421 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 3000322  T
Q  115 ctc 117  Q
    |||    
T  3000321 ctc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 27564733 - 27564836
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  27564733 agagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatta 27564832  T
Q  115 ctca 118  Q
    ||||    
T  27564833 ctca 27564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 47452318 - 47452421
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  47452318 agagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 47452417  T
Q  115 ctca 118  Q
    ||||    
T  47452418 ctca 47452421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 48716284 - 48716383
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  48716284 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 38595256 - 38595154
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  38595256 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcatta 38595157  T
Q  115 ctc 117  Q
    |||    
T  38595156 ctc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 51898683 - 51898783
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 51898782  T
Q  117 c 117  Q
    |    
T  51898783 c 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 8346386 - 8346488
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||| |||||||||||||    
T  8346386 agagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcatta 8346485  T
Q  115 ctc 117  Q
    |||    
T  8346486 ctc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 38632323 - 38632421
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||    
T  38632323 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 50630560 - 50630458
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||  ||||||||||||||||||| ||||||||||||||    
T  50630560 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcatta 50630461  T
Q  115 ctc 117  Q
    |||    
T  50630460 ctc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 44548374 - 44548473
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||  |||||||||||||||| | ||||||||||||||||    
T  44548374 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 32813349 - 32813247
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||| |    
T  32813349 agagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataa 32813250  T
Q  115 ctc 117  Q
    |||    
T  32813249 ctc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 37649297 - 37649197
Alignment:
Q  18 gaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||||  | | |||||| |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37649297 gaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T
Q  118 a 118  Q
    |    
T  37649197 a 37649197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 43234 - 43132
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||  ||||||| | ||||||  ||||||||||||||||    
T  43234 agagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcatta 43135  T
Q  115 ctc 117  Q
    |||    
T  43134 ctc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 41758907 - 41758805
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| |||||||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||||  ||| ||||||||||||||||||    
T  41758907 agagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcatta 41758808  T
Q  115 ctc 117  Q
    |||    
T  41758807 ctc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 11152378 - 11152476
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||| ||||||||||||||||  | ||||||||||||||| |||||||||| |||| ||| |||||||||||||||| ||||||||||| ||||||||    
T  11152378 agaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 50590998 - 50591101
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  50590998 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 50591097  T
Q  115 ctca 118  Q
    ||||    
T  50591098 ctca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 5958998 - 5959100
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   |||| || ||||||| |||||||||||||||||   |||||||||||| ||||||||| |||||||||| |    
T  5958998 agagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataa 5959097  T
Q  115 ctc 117  Q
    |||    
T  5959098 ctc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 23597093 - 23597191
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||| ||||||  ||||  |||| | |||||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  23597093 aaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 13414863 - 13414791
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattg 87  Q
    ||||||| |||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  13414863 agagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 26274530 - 26274435
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||| || ||| |||||||| |||||||| |||| ||||| |||||||   ||||||||||| ||||||||||||||||||||||    
T  26274530 aaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 49811525 - 49811627
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||| |||    || |||||||||||| |||||||||| |||||||  |||||||| ||||||||| ||||||| |||||| |    
T  49811525 agagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataa 49811624  T
Q  115 ctc 117  Q
    |||    
T  49811625 ctc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 3302533 - 3302634
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||  |||||||   ||| ||||||||||| ||||||||||||||| | || | ||||| ||||||||| ||| ||||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattact 3302632  T
Q  117 ca 118  Q
    ||    
T  3302633 ca 3302634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 26440836 - 26440741
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatc 110  Q
    ||||||||||||||| |||||| |||  ||| | |||||||||| |||||||||||||| |||| |||||||| || |||||| ||||||| ||||    
T  26440836 agagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 41608491 - 41608594
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||| ||||||||   || | || ||||||| ||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| |    
T  41608491 agagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataa 41608590  T
Q  115 ctca 118  Q
    ||||    
T  41608591 ctca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 45044558 - 45044640
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagg 97  Q
    ||||||| |||| |||||||||||||  ||| |||| ||||||| |||||| |||||||||||  ||||||||||||||||||    
T  45044558 agagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 44454077 - 44453984
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaa-agagtgtattgccacctaagggtgtctatgtatcat 112  Q
    |||||||||||||| ||| ||| ||| || || ||||||| |||||||||||| |||| ||| ||||||||||| ||| ||||||||||||||||    
T  44454077 aaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagaga-tgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 37926436 - 37926538
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||| |||| |||  ||| | |||||||||| |||| ||||||||| |||   ||||||||||||||| | | |||||||||||| |    
T  37926436 agagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataa 37926535  T
Q  115 ctc 117  Q
    |||    
T  37926536 ctc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 750301 - 750239
Alignment:
Q  28 ttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||| |||||||  || || ||||||||||||||||||||||||| |||| ||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 47748544 - 47748442
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||| | |||||||||| |||   || | || ||||||| |||| | |||||||||| | |||||||||||||||||||| | |||||||||| |    
T  47748544 agagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaagg-gtgtattgccacctaagggtatttatgtatcataa 47748446  T
Q  115 ctca 118  Q
    ||||    
T  47748445 ctca 47748442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 4401453 - 4401494
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  4401453 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 7447950 - 7447991
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  7447950 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 24769474 - 24769433
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  24769474 acgtgtcagaattttgtgtggatgt-aaagagtgtattgccac 24769433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 44334175 - 44334245
Alignment:
Q  22 gtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacc 92  Q
    ||||| |||||| ||||||  |||||||||||||||  |||||||||| |||||| | ||||||| |||||    
T  44334175 gtgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 50448235 - 50448194
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  50448235 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 48489400 - 48489343
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtc 74  Q
    ||||| |||||||||||||| ||| |||||| || ||||||| |||||||||| ||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 15197435 - 15197332
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  15197435 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 15197336  T
Q  115 ctca 118  Q
    ||||    
T  15197335 ctca 15197332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 12831149 - 12831047
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12831149 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatta 12831050  T
Q  115 ctc 117  Q
    |||    
T  12831049 ctc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 504119 - 504222
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  504119 agagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 504218  T
Q  115 ctca 118  Q
    ||||    
T  504219 ctca 504222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 14548024 - 14547922
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  14548024 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatcttta 14547925  T
Q  115 ctc 117  Q
    |||    
T  14547924 ctc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 23122595 - 23122698
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  23122595 agagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcatta 23122694  T
Q  115 ctca 118  Q
    ||||    
T  23122695 ctca 23122698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 34012294 - 34012397
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  34012294 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 34012393  T
Q  115 ctca 118  Q
    ||||    
T  34012394 ctca 34012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 40423941 - 40424044
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  40423941 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcatta 40424040  T
Q  115 ctca 118  Q
    ||||    
T  40424041 ctca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 10284629 - 10284731
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  10284629 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataa 10284728  T
Q  115 ctc 117  Q
    |||    
T  10284729 ctc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 44507085 - 44507187
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  44507085 agagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcatta 44507184  T
Q  115 ctc 117  Q
    |||    
T  44507185 ctc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 37038579 - 37038479
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 37038480  T
Q  117 c 117  Q
    |    
T  37038479 c 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 1179938 - 1180040
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||  ||| | ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1179938 agagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 1180037  T
Q  115 ctc 117  Q
    |||    
T  1180038 ctc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 5957932 - 5957831
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  5957932 agagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcatta 5957833  T
Q  115 ct 116  Q
    ||    
T  5957832 ct 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 15048180 - 15048282
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||| |    
T  15048180 agagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataa 15048278  T
Q  115 ctca 118  Q
    ||||    
T  15048279 ctca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 8841430 - 8841513
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaaggg 98  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||    
T  8841430 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 10621085 - 10621182
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    |||||||||||||||||||||| ||   ||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  10621085 agagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 43414579 - 43414682
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| |||  ||||| |||||| ||| ||||||||||||||||||| |||| |||||| |||||| |||||||||||||| |    
T  43414579 agagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataa 43414678  T
Q  115 ctca 118  Q
    ||||    
T  43414679 ctca 43414682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 16383479 - 16383377
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  16383479 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 16383380  T
Q  115 ctc 117  Q
    |||    
T  16383379 ctc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 20074940 - 20075035
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||| ||||||        |||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20074940 agagaaagtgtgcttgtgcagggtcc--------acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcatta 20075031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 4854861 - 4854963
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||| ||||||  ||| | || | ||||| |||| ||| ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  4854861 agagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcatta 4854960  T
Q  115 ctc 117  Q
    |||    
T  4854961 ctc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 9122287 - 9122196
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||          |||||||||||||||||||||||||||||||||||    
T  9122287 agagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg----------gtgtattgccacctaagggtgtctatgtatcatta 9122198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 34307318 - 34307216
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| |||||||||||| |   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  34307318 agagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 34307219  T
Q  115 ctc 117  Q
    |||    
T  34307218 ctc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 42221617 - 42221515
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||  |||||||   ||| ||||||||||| ||||||||||||||| | || ||||||| ||||||||| ||| ||||||||||||    
T  42221617 agagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcatta 42221518  T
Q  115 ctc 117  Q
    |||    
T  42221517 ctc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  34 ggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||| ||||||||| ||| ||| |||||||||| |||||| |||||||||| |||||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 17443927 - 17443825
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||  ||||| ||||||| | ||||||| ||||||| ||||||||| |||| ||  ||||||||| ||||||||| |||||||||||||| |    
T  17443927 agagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataa 17443828  T
Q  115 ctc 117  Q
    |||    
T  17443827 ctc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 24307791 - 24307893
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || | ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||||||||| |    
T  24307791 agagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataa 24307890  T
Q  115 ctc 117  Q
    |||    
T  24307891 ctc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 30479472 - 30479574
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| |||||||| |||||   |  | || ||||||| |||| ||||| |||||||| |||||||||||||||||||||| |||||||||| |    
T  30479472 agagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataa 30479571  T
Q  115 ctc 117  Q
    |||    
T  30479572 ctc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 24307692 - 24307629
Alignment:
Q  54 tcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||||||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 15258927 - 15259029
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||||| |||||| |||||| || ||||||| |||| ||||| |||| | |  |||||||||| ||||| || |||||||||||| |    
T  15258927 agagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataa 15259026  T
Q  115 ctc 117  Q
    |||    
T  15259027 ctc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 16056399 - 16056501
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| |  ||||||| ||| ||||| ||| |||||||||| |    
T  16056399 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataa 16056498  T
Q  115 ctc 117  Q
    |||    
T  16056499 ctc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 32032826 - 32032725
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||| || |||   || | || ||||||| |||||||||| |||||| || ||||||||||||||||||||| |||||||||| |    
T  32032826 agagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaagga-tgtattgccacctaagggtgtttatgtatcataa 32032728  T
Q  115 ctc 117  Q
    |||    
T  32032727 ctc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 38229530 - 38229428
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||| | |  ||| |||||| || ||||||| ||||||||||||||| | ||| ||||||||||||||| ||||  ||||||||| |    
T  38229530 agagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcataa 38229432  T
Q  115 ctca 118  Q
    ||||    
T  38229431 ctca 38229428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 30912537 - 30912496
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  30912537 acgtgtcagaattttgtgtgggtgt-aaagagtgtattgccac 30912496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 25838252 - 25838197
Alignment:
Q  62 ttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||| ||||||| ||||||||||||||||||| | ||||| |||||| ||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 29705466 - 29705528
Alignment:
Q  28 ttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    |||||||||||||  ||  | ||||||||||||||||||||||||| |||| ||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 2547121 - 2547162
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  2547121 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 30183906 - 30183976
Alignment:
Q  48 tacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    ||||| ||||| |||||| || ||||| | || ||||||||||| ||||| ||| ||||||||||||||||    
T  30183906 tacgtatcagatttttgtatgagtgtccaggaatgtattgccacgtaaggatgtatatgtatcattactca 30183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 42668905 - 42668953
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaaggg 98  Q
    |||||||| |||| |||||||||||||||| ||||| |||||||||||||    
T  42668905 acgtgtcacaattgtgtgtgggtgtcaaagtgtgta-tgccacctaaggg 42668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 11582891 - 11582958
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||| ||||||| |||| |||||||||||| | |||  ||  ||||||||||||||    
T  11582891 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactc 11582958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 18520882 - 18520981
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18520882 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 40145509 - 40145406
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  40145509 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcatta 40145410  T
Q  115 ctca 118  Q
    ||||    
T  40145409 ctca 40145406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 2740376 - 2740274
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  2740376 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 2740277  T
Q  115 ctc 117  Q
    |||    
T  2740276 ctc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 36732940 - 36733042
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  36732940 agagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcatta 36733039  T
Q  115 ctc 117  Q
    |||    
T  36733040 ctc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 33149636 - 33149739
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  33149636 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatta 33149735  T
Q  115 ctca 118  Q
    ||||    
T  33149736 ctca 33149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 13811754 - 13811652
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  13811754 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttta 13811655  T
Q  115 ctc 117  Q
    |||    
T  13811654 ctc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 14831914 - 14831813
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 14831815  T
Q  117 ca 118  Q
    ||    
T  14831814 ca 14831813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 35785301 - 35785198
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  35785301 agagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 35785202  T
Q  115 ctca 118  Q
    ||||    
T  35785201 ctca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 42414304 - 42414403
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  42414304 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactca 42414403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 28177877 - 28177774
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| |||||||||||||  ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |    
T  28177877 agagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataa 28177778  T
Q  115 ctca 118  Q
    ||||    
T  28177777 ctca 28177774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 15409608 - 15409710
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||| ||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |    
T  15409608 agagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataa 15409707  T
Q  115 ctc 117  Q
    |||    
T  15409708 ctc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 35943890 - 35943992
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||| |    
T  35943890 agagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataa 35943989  T
Q  115 ctc 117  Q
    |||    
T  35943990 ctc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 31009088 - 31008988
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||  |||| ||||||| ||||||||| ||| |||||||||| |||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataact 31008989  T
Q  117 c 117  Q
    |    
T  31008988 c 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 6679800 - 6679698
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||| |||||||||||||  ||||| |||||||||| ||||||||||||||||||  |||||||||||||||| | |||||||||||||| |    
T  6679800 agagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataa 6679701  T
Q  115 ctc 117  Q
    |||    
T  6679700 ctc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 26720618 - 26720514
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| |||  ||| | |||||||||| |||| ||| ||||| |||| |||||||||||||||||| |||||||||||||| |    
T  26720618 agagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataa 26720519  T
Q  115 ctcag 119  Q
    |||||    
T  26720518 ctcag 26720514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 26990367 - 26990263
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| |||  ||| | |||||||||| |||| ||| ||||| |||| |||||||||||||||||| |||||||||||||| |    
T  26990367 agagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataa 26990268  T
Q  115 ctcag 119  Q
    |||||    
T  26990267 ctcag 26990263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 3921263 - 3921365
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||||| |    
T  3921263 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 3921362  T
Q  115 ctc 117  Q
    |||    
T  3921363 ctc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 36875610 - 36875702
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36875610 agagaaagtgtgcttgtgcgggatccacgtgactat---------ttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 36875700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 2252166 - 2252268
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||||||||||||| ||| |||||||||| |    
T  2252166 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataa 2252265  T
Q  115 ctc 117  Q
    |||    
T  2252266 ctc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 33825322 - 33825424
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||   ||| | | |||  |||||||||| |||| |||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  33825322 agagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcatta 33825421  T
Q  115 ctc 117  Q
    |||    
T  33825422 ctc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 41470425 - 41470516
Alignment:
Q  26 gcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||| ||||||||||||||||| |||| | ||  | | ||||  ||||||||||||||| ||||||||||||| |||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 6259999 - 6260102
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| || | |||||  ||||| | |||| ||| ||||| |||||||| |||| |||||||| |||||| || ||| ||||||||||||    
T  6259999 agagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcatta 6260098  T
Q  115 ctca 118  Q
    ||||    
T  6260099 ctca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 9603915 - 9603813
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||  |||||||   |||| | |||||||| |||||||| ||||| || |||||||||  ||||||||| ||| ||||||||||||    
T  9603915 agagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcatta 9603816  T
Q  115 ctc 117  Q
    |||    
T  9603815 ctc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 39688895 - 39688997
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||| |||||||| |   |||| || | ||||| ||||||||||||||||| |  ||||||||||| ||||||||| |||||||||| |    
T  39688895 agagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataa 39688994  T
Q  115 ctc 117  Q
    |||    
T  39688995 ctc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 20073516 - 20073616
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    ||||||||||||||||| |||||| ||||   |||||  ||| |||| |||| ||||||||| |||||||| || |||| | ||||||| ||||||||||    
T  20073516 agaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattact 20073615  T
Q  117 c 117  Q
    |    
T  20073616 c 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  54 tcagaattttgtgtgggtgtcaaagag-tgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 31132442 - 31132392
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgg 69  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||    
T  31132442 aaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 33801594 - 33801635
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  33801594 acgtgtcagaattttgtgtgggtgt-aaagagtgtattgccac 33801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 16327999 - 16327902
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||| | ||| | | |||  |||||||||| |||| |||||||||||| |  ||||||||||||||||| | | ||| ||||||||||    
T  16327999 aaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 21370106 - 21370048
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgt 73  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||| ||||| ||||||||    
T  21370106 agagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 38296304 - 38296203
Alignment:
Q  16 gagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattac 115  Q
    |||||||||||||||||  || ||| |||  ||||||||| || |||||||||||| | ||   |||||||| ||||||||   ||||||||||||| ||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataac 38296205  T
Q  116 tc 117  Q
    ||    
T  38296204 tc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 2614624 - 2614557
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||||||||| ||||||| |||| |||||||||||| | |||  ||  ||||||||||||||    
T  2614624 acgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactc 2614557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 11511460 - 11511563
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11511460 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 11511559  T
Q  115 ctca 118  Q
    ||||    
T  11511560 ctca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 48183047 - 48183149
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48183047 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcatta 48183146  T
Q  115 ctc 117  Q
    |||    
T  48183147 ctc 48183149  T

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Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 50052426 - 50052528
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  50052426 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatta 50052525  T
Q  115 ctc 117  Q
    |||    
T  50052526 ctc 50052528  T

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Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 3481756 - 3481653
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3481756 agagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcatta 3481657  T
Q  115 ctca 118  Q
    ||||    
T  3481656 ctca 3481653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 6034146 - 6034043
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6034146 agagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 6034047  T
Q  115 ctca 118  Q
    ||||    
T  6034046 ctca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 480445 - 480547
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  480445 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatta 480544  T
Q  115 ctc 117  Q
    |||    
T  480545 ctc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 41236449 - 41236347
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  41236449 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 41236350  T
Q  115 ctc 117  Q
    |||    
T  41236349 ctc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 42044365 - 42044467
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  42044365 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcatta 42044464  T
Q  115 ctc 117  Q
    |||    
T  42044465 ctc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 54473535 - 54473634
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  54473535 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 29234243 - 29234345
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||| |||||| ||||||||||| |||||||||||||||||||||||    
T  29234243 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcatta 29234342  T
Q  115 ctc 117  Q
    |||    
T  29234343 ctc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 29239988 - 29239886
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  29239988 agagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatta 29239889  T
Q  115 ctc 117  Q
    |||    
T  29239888 ctc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 31910294 - 31910191
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |    
T  31910294 agagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataa 31910195  T
Q  115 ctca 118  Q
    ||||    
T  31910194 ctca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 24995105 - 24995207
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||||||||||||||||| ||||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||| || ||||||||    
T  24995105 agagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcatta 24995204  T
Q  115 ctc 117  Q
    |||    
T  24995205 ctc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 50526171 - 50526272
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||| ||||||||||||  ||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  50526171 agaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattact 50526270  T
Q  117 ca 118  Q
    ||    
T  50526271 ca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 23608337 - 23608235
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| || || | ||||||||||||||||| ||||||||||||||||||  |||||||| || |||||||||||||| ||||||||    
T  23608337 agagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcatta 23608238  T
Q  115 ctc 117  Q
    |||    
T  23608237 ctc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 53352564 - 53352660
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 112  Q
    ||||||||| |||||||||||||||| | | ||||||||||||| |||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  53352564 agagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 29977987 - 29977885
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| |||||||   ||||||||||||||| |||||||||||||| || | ||||||||||||||| || | | ||||||||||||    
T  29977987 agagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcatta 29977888  T
Q  115 ctc 117  Q
    |||    
T  29977887 ctc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 40574881 - 40574778
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||| |||  ||  |  ||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||| |    
T  40574881 agagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataa 40574782  T
Q  115 ctca 118  Q
    ||||    
T  40574781 ctca 40574778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 19670714 - 19670816
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||| ||||||| | |||||||||||||||||||||| |||||||||| |    
T  19670714 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataa 19670813  T
Q  115 ctc 117  Q
    |||    
T  19670814 ctc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 41823984 - 41823921
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaag 78  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| ||||    
T  41823984 agagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaag 41823921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 47986310 - 47986208
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| |||||||||| |||||| |  ||||||||||||||||||||| |||||||||| |    
T  47986310 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataa 47986211  T
Q  115 ctc 117  Q
    |||    
T  47986210 ctc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 50813890 - 50813992
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| |||||||||||| |   |||| || ||||||| ||||||||||||||||| | ||||||| ||||||||| |||| |||||||||| |    
T  50813890 agagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataa 50813989  T
Q  115 ctc 117  Q
    |||    
T  50813990 ctc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 55475293 - 55475191
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||| ||| ||||||   || | || ||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||| |    
T  55475293 agagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataa 55475194  T
Q  115 ctc 117  Q
    |||    
T  55475193 ctc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 28480267 - 28480360
Alignment:
Q  16 gagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtat 109  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||||| ||||||||| |||| ||  ||||||||| ||||||||| |||||||||||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 28481142 - 28481235
Alignment:
Q  16 gagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtat 109  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||||| ||||||||| |||| ||  ||||||||| ||||||||| |||||||||||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 28482017 - 28482110
Alignment:
Q  16 gagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtat 109  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||||| ||||||||| |||| ||  ||||||||| ||||||||| |||||||||||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 17983741 - 17983825
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggt 99  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  17983741 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 32767060 - 32766958
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||| ||||||   || | || ||||||| |||||| |||||||||| | ||||||||||||||||| |||| |||||||||| |    
T  32767060 agagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataa 32766961  T
Q  115 ctc 117  Q
    |||    
T  32766960 ctc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  52 tgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||| ||||||||||||||||| |  ||||||||||||||||| ||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  52 tgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||| |||||| ||||||||||   |||||||||||||||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||| | |||||||||||||||| ||||||||||| || |||||  ||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 8343161 - 8343263
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||| | ||| ||||||||||   || | || ||||||| |||| ||| ||||||||||  ||||||||||||||||| ||| |||||||||| |    
T  8343161 agagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataa 8343260  T
Q  115 ctc 117  Q
    |||    
T  8343261 ctc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 48647724 - 48647826
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||||||| |||| |||||| |||||| ||| |||| ||||||||| ||   ||||||||  |||||||| ||| ||||| |||| |    
T  48647724 agagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataa 48647823  T
Q  115 ctc 117  Q
    |||    
T  48647824 ctc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 18924530 - 18924596
Alignment:
Q  52 tgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    ||||||| |||||||||| | |||| | |||||||||||||||||||| | |||| ||||| |||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactca 18924596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 29589738 - 29589831
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtat 109  Q
    ||||||||||| |||||| |||||||   || | || | ||||| ||||||||||||||||| | |||||||| || |||||||||| |||||||    
T  29589738 agagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 44536744 - 44536845
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||| || ||||||    |||| || ||||||| |||||||||| |||||| | ||||||||||||||||  |||| |||||||||| |    
T  44536744 agagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaagg-gtgtattgccacctaaaagtgtttatgtatcataa 44536842  T
Q  115 ctc 117  Q
    |||    
T  44536843 ctc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 33703266 - 33703306
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgcca 90  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  33703266 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 33703306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 28863557 - 28863458
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28863557 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 9058582 - 9058480
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9058582 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 9058483  T
Q  115 ctc 117  Q
    |||    
T  9058482 ctc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 33436098 - 33436200
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33436098 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 33436197  T
Q  115 ctc 117  Q
    |||    
T  33436198 ctc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 13438445 - 13438342
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  13438445 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcatta 13438346  T
Q  115 ctca 118  Q
    ||||    
T  13438345 ctca 13438342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 7465733 - 7465835
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7465733 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatta 7465832  T
Q  115 ctc 117  Q
    |||    
T  7465833 ctc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 10249380 - 10249482
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  10249380 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatta 10249479  T
Q  115 ctc 117  Q
    |||    
T  10249480 ctc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 17473122 - 17473020
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17473122 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatta 17473023  T
Q  115 ctc 117  Q
    |||    
T  17473022 ctc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 32505648 - 32505748
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  117 c 117  Q
    |    
T  32505748 c 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 40701580 - 40701477
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  40701580 agagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatta 40701481  T
Q  115 ctca 118  Q
    ||||    
T  40701480 ctca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 5574486 - 5574588
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5574486 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatta 5574585  T
Q  115 ctc 117  Q
    |||    
T  5574586 ctc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 30915565 - 30915463
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  30915565 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcatta 30915466  T
Q  115 ctc 117  Q
    |||    
T  30915465 ctc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 19930818 - 19930917
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||| ||||||||||||| | ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19930818 agagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 27864806 - 27864703
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  27864806 agagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcatta 27864707  T
Q  115 ctca 118  Q
    ||||    
T  27864706 ctca 27864703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 28381653 - 28381756
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  28381653 agagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcatta 28381752  T
Q  115 ctca 118  Q
    ||||    
T  28381753 ctca 28381756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 40613900 - 40614003
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||| | |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |    
T  40613900 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataa 40613999  T
Q  115 ctca 118  Q
    ||||    
T  40614000 ctca 40614003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 20700917 - 20700815
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||||||| || ||||||| |||||||||||| ||||| ||||||||||||||||    
T  20700917 agagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcatta 20700818  T
Q  115 ctc 117  Q
    |||    
T  20700817 ctc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 4060785 - 4060684
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattact 116  Q
    ||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 4060686  T
Q  117 ca 118  Q
    ||    
T  4060685 ca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 38882809 - 38882913
Alignment:
Q  15 agagaaagtgtgcttgtgcgggg---tccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatca 111  Q
    |||||||||| ||||||||||||   ||| ||||||||||||||||| |||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  38882809 agagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatca 38882907  T
Q  112 ttactc 117  Q
    ||||||    
T  38882908 ttactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 38273140 - 38273242
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||| |||||||||||  ||| |||||||||||| |||||||||||||| |||| ||||||||||| |||||  |||||||||||||| |    
T  38273140 agagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataa 38273239  T
Q  115 ctc 117  Q
    |||    
T  38273240 ctc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 26891502 - 26891604
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| ||||||||| || ||||| |||||| || ||||||| ||||||||||||||| | | ||||||||||||||||||||| ||||||||||| |    
T  26891502 agagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataa 26891601  T
Q  115 ctc 117  Q
    |||    
T  26891602 ctc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 42257295 - 42257193
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||||||||||||  ||| | |||||||||| |||| |||||||||||||   ||||||||||||||| | |||||||||||||| |    
T  42257295 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataa 42257196  T
Q  115 ctc 117  Q
    |||    
T  42257195 ctc 42257193  T

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Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 3440081 - 3439985
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatca 111  Q
    ||||||| |||||||||||||||||| ||| |  || ||| ||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  3440081 agagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 2533221 - 2533124
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    |||||||||||||||||||||   ||| |||||||||||| |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||| ||||    
T  2533221 aaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 17820002 - 17820105
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||| |||| ||||| ||||||| ||| || || ||||||| ||||||||||||||||| | |||||||||||||||  | |||||||||||||| |    
T  17820002 agagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataa 17820101  T
Q  115 ctca 118  Q
    ||||    
T  17820102 ctca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 43490219 - 43490120
Alignment:
Q  19 aaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactca 118  Q
    ||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||    
T  43490219 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactca 43490120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 33436313 - 33436211
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||   |||| | ||   |||||||||| |||| |||||||||||||  ||||||||||| |||||| ||||||||||||||||    
T  33436313 agagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcatta 33436214  T
Q  115 ctc 117  Q
    |||    
T  33436213 ctc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 38732456 - 38732354
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   |||| || ||||||| ||||||||||||||||| |  ||||||| ||| ||||||||| |||||||||| |    
T  38732456 agagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataa 38732357  T
Q  115 ctc 117  Q
    |||    
T  38732356 ctc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 2997485 - 2997569
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggt 99  Q
    ||||||||||| ||||||||||||||   || | || ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  2997485 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 36168938 - 36168836
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||| ||||||||||||||||  ||| | |||||||| | ||||||||||| || ||||  ||||||| || |||||| |||||||||||||| |    
T  36168938 agagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataa 36168839  T
Q  115 ctc 117  Q
    |||    
T  36168838 ctc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 41575240 - 41575138
Alignment:
Q  15 agagaaagtgtgcttgtgc-ggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 113  Q
    ||||||||||||||||||  ||||||| | |||| || ||||| | |||||||||  |||||||| ||||||| ||| |||||| |||||||||||||||    
T  41575240 agagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcatt 41575141  T
Q  114 act 116  Q
    |||    
T  41575140 act 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 45097733 - 45097835
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||| ||||||||||||||   || | || ||||||| |||||| |||||||||| |  ||||||||||||||||| ||| |||||||||| |    
T  45097733 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataa 45097832  T
Q  115 ctc 117  Q
    |||    
T  45097833 ctc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 17823853 - 17823784
Alignment:
Q  48 tacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 117  Q
    ||||||||||| ||||||||||||||  | || ||||||||||||||||| ||| |||||||||||||||    
T  17823853 tacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 13365455 - 13365369
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgt 101  Q
    ||||||||||| ||||||||||||||   ||   || ||||||| ||||||||||||||||| | || |||||||| ||||||||||    
T  13365455 agagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgt 13365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 3738043 - 3737986
Alignment:
Q  17 agaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtc 74  Q
    ||||| |||||||||||||||||| | |||| || ||||||| |||||||||||||||    
T  3738043 agaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 16096873 - 16096914
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  16096873 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 42849834 - 42849793
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  42849834 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 927 - 1030
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| | | ||||||||||||||||  |||||||||| ||| |||| |||||||||||||||| | ||||||||||||||||    
T  927 agagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatta 1026  T
Q  115 ctca 118  Q
    ||||    
T  1027 ctca 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 927 - 1030
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    |||||||||||||||||||||| | | ||||||||||||||||  |||||||||| ||| |||| |||||||||||||||| | ||||||||||||||||    
T  927 agagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatta 1026  T
Q  115 ctca 118  Q
    ||||    
T  1027 ctca 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 10107 - 10209
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||||| || ||||| ||||||||||||||||| |||| ||||| ||||||||  ||||||||||||||| |||||||||||||||| |    
T  10107 agagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataa 10206  T
Q  115 ctc 117  Q
    |||    
T  10207 ctc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 4131 - 4029
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatta 114  Q
    ||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||||||| |||  ||||||||||| |||| ||||||||||||||||||    
T  4131 agagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcatta 4032  T
Q  115 ctc 117  Q
    |||    
T  4031 ctc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 152600 - 152514
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccacctaagggtgt 101  Q
    |||||||||||  ||||||||| |||   |||| || ||||||| ||||||||||||||||| | ||||||||||||| ||||||||    
T  152600 agagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 17156 - 17097
Alignment:
Q  15 agagaaagtgtgcttgtgcggggtccgcgtgactacgtgtcagaattttgtgtgggtgtc 74  Q
    ||||||| ||||||||||||||||||  ||||| || ||||||| |||||||||| ||||    
T  17156 agagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 810 - 851
Alignment:
Q  49 acgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  810 acgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 11374 - 11417
Alignment:
Q  47 ctacgtgtcagaattttgtgtgggtgtcaaagagtgtattgccac 91  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||    
T  11374 ctacgtgtcagaattttgtgtaggtgt-aaatagtgtattgccac 11417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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