View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9077_low_53 (Length: 355)

Name: NF9077_low_53
Description: NF9077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9077_low_53
NF9077_low_53
[»] chr8 (22 HSPs)
chr8 (18-344)||(27764481-27764807)
chr8 (166-231)||(10934684-10934749)
chr8 (157-230)||(17986266-17986339)
chr8 (166-218)||(27976807-27976859)
chr8 (166-218)||(28034076-28034128)
chr8 (166-224)||(27502902-27502960)
chr8 (141-194)||(2561681-2561734)
chr8 (153-218)||(5888343-5888408)
chr8 (151-230)||(17871758-17871837)
chr8 (143-218)||(17871821-17871896)
chr8 (181-235)||(13964409-13964463)
chr8 (188-226)||(28882767-28882805)
chr8 (143-193)||(32904468-32904518)
chr8 (175-225)||(44319521-44319571)
chr8 (153-223)||(44319597-44319667)
chr8 (166-223)||(11295666-11295723)
chr8 (201-230)||(11322677-11322706)
chr8 (201-230)||(45145559-45145588)
chr8 (153-225)||(2296474-2296546)
chr8 (166-214)||(7484698-7484746)
chr8 (146-226)||(24471183-24471263)
chr8 (181-225)||(24471273-24471317)
[»] chr6 (17 HSPs)
chr6 (145-230)||(16121025-16121110)
chr6 (146-226)||(26527189-26527269)
chr6 (166-225)||(26527271-26527330)
chr6 (153-224)||(31996567-31996638)
chr6 (166-231)||(32254902-32254967)
chr6 (166-218)||(34379816-34379868)
chr6 (179-230)||(7055652-7055703)
chr6 (156-230)||(3203666-3203740)
chr6 (166-231)||(5069934-5069999)
chr6 (166-223)||(12104747-12104804)
chr6 (153-230)||(26388259-26388336)
chr6 (181-225)||(8449672-8449716)
chr6 (181-225)||(8458476-8458520)
chr6 (174-218)||(16199212-16199256)
chr6 (153-225)||(32254821-32254893)
chr6 (153-225)||(33689297-33689368)
chr6 (166-218)||(34170085-34170137)
[»] chr3 (30 HSPs)
chr3 (156-230)||(39579564-39579638)
chr3 (166-226)||(331879-331939)
chr3 (166-226)||(7882280-7882340)
chr3 (166-228)||(34327589-34327651)
chr3 (153-230)||(37897750-37897827)
chr3 (166-231)||(41254012-41254077)
chr3 (153-226)||(52215948-52216021)
chr3 (153-218)||(54783384-54783449)
chr3 (182-226)||(7829140-7829184)
chr3 (156-232)||(39964288-39964364)
chr3 (166-226)||(40639790-40639850)
chr3 (166-218)||(54595797-54595849)
chr3 (182-225)||(7823964-7824007)
chr3 (166-225)||(21217166-21217225)
chr3 (166-225)||(48191715-48191774)
chr3 (175-225)||(24075447-24075497)
chr3 (153-223)||(29497362-29497432)
chr3 (182-223)||(7826820-7826861)
chr3 (151-232)||(8036529-8036610)
chr3 (181-226)||(8504849-8504894)
chr3 (153-218)||(12744969-12745034)
chr3 (166-223)||(24694230-24694287)
chr3 (153-218)||(24722694-24722759)
chr3 (153-225)||(331799-331870)
chr3 (166-218)||(22496958-22497010)
chr3 (182-226)||(23642854-23642898)
chr3 (166-226)||(27224579-27224639)
chr3 (166-218)||(30519679-30519731)
chr3 (153-193)||(35239685-35239725)
chr3 (146-218)||(44382873-44382945)
[»] chr1 (31 HSPs)
chr1 (143-229)||(28038885-28038971)
chr1 (143-230)||(28038820-28038909)
chr1 (166-225)||(24981922-24981981)
chr1 (146-228)||(39940548-39940629)
chr1 (181-230)||(6156629-6156678)
chr1 (166-219)||(14967306-14967359)
chr1 (181-229)||(1409145-1409193)
chr1 (166-226)||(3013691-3013751)
chr1 (166-226)||(23398418-23398478)
chr1 (175-223)||(46412705-46412753)
chr1 (143-231)||(50308622-50308710)
chr1 (166-226)||(50550200-50550260)
chr1 (151-230)||(9675961-9676040)
chr1 (179-230)||(24419528-24419579)
chr1 (147-218)||(24981848-24981919)
chr1 (181-228)||(32796842-32796889)
chr1 (179-225)||(15057657-15057703)
chr1 (156-230)||(29043449-29043523)
chr1 (156-230)||(38834606-38834680)
chr1 (143-193)||(50155360-50155410)
chr1 (181-230)||(5431436-5431485)
chr1 (181-226)||(8338674-8338719)
chr1 (181-230)||(10256776-10256825)
chr1 (181-226)||(34953992-34954037)
chr1 (143-212)||(38737993-38738062)
chr1 (181-226)||(45115266-45115311)
chr1 (165-230)||(50308708-50308773)
chr1 (179-223)||(748743-748787)
chr1 (166-230)||(5368855-5368919)
chr1 (153-213)||(33765855-33765915)
chr1 (181-221)||(34597524-34597564)
[»] chr5 (25 HSPs)
chr5 (153-226)||(10437705-10437778)
chr5 (143-230)||(22227039-22227126)
chr5 (153-219)||(3100411-3100477)
chr5 (181-230)||(8717803-8717852)
chr5 (147-220)||(17625702-17625775)
chr5 (156-229)||(25694186-25694259)
chr5 (181-226)||(43117385-43117430)
chr5 (165-216)||(892560-892611)
chr5 (143-230)||(13391589-13391676)
chr5 (175-226)||(14772547-14772598)
chr5 (165-223)||(4297277-4297335)
chr5 (153-231)||(5240220-5240298)
chr5 (166-228)||(25792927-25792989)
chr5 (153-218)||(32911560-32911626)
chr5 (189-226)||(71365-71402)
chr5 (201-230)||(7604183-7604212)
chr5 (143-224)||(7613359-7613440)
chr5 (181-226)||(11795735-11795780)
chr5 (181-226)||(15549421-15549466)
chr5 (153-218)||(21032539-21032604)
chr5 (143-216)||(25694124-25694197)
chr5 (181-230)||(40100082-40100131)
chr5 (166-218)||(18652846-18652898)
chr5 (159-231)||(29486572-29486644)
chr5 (151-214)||(32911480-32911544)
[»] chr7 (22 HSPs)
chr7 (166-234)||(10095710-10095778)
chr7 (166-226)||(25245224-25245284)
chr7 (179-230)||(2456331-2456382)
chr7 (181-230)||(47535066-47535116)
chr7 (181-226)||(6455548-6455593)
chr7 (153-218)||(23818431-23818496)
chr7 (166-218)||(2943219-2943271)
chr7 (166-226)||(5950275-5950335)
chr7 (166-226)||(43103071-43103131)
chr7 (179-230)||(3967700-3967751)
chr7 (166-225)||(41404015-41404074)
chr7 (147-217)||(7701250-7701320)
chr7 (181-231)||(8127923-8127973)
chr7 (181-231)||(38940214-38940264)
chr7 (166-223)||(7701190-7701247)
chr7 (181-226)||(12274905-12274950)
chr7 (201-230)||(24155577-24155606)
chr7 (153-218)||(25774250-25774315)
chr7 (153-218)||(31115677-31115742)
chr7 (166-226)||(7295137-7295197)
chr7 (166-230)||(21857064-21857128)
chr7 (181-225)||(28228988-28229032)
[»] chr4 (37 HSPs)
chr4 (153-230)||(22720574-22720651)
chr4 (147-223)||(34616277-34616353)
chr4 (166-225)||(38381976-38382035)
chr4 (143-193)||(45828477-45828527)
chr4 (181-226)||(14450956-14451001)
chr4 (166-230)||(2198043-2198107)
chr4 (166-230)||(22235341-22235405)
chr4 (166-226)||(23568461-23568521)
chr4 (166-230)||(24100758-24100822)
chr4 (146-218)||(38382037-38382109)
chr4 (166-226)||(40575838-40575898)
chr4 (166-226)||(53176307-53176367)
chr4 (153-224)||(2582809-2582880)
chr4 (175-226)||(19878146-19878197)
chr4 (153-223)||(16170978-16171048)
chr4 (156-230)||(43616216-43616290)
chr4 (156-230)||(51313462-51313536)
chr4 (181-226)||(19934734-19934779)
chr4 (153-218)||(21142097-21142162)
chr4 (181-226)||(47308113-47308158)
chr4 (153-218)||(52914066-52914131)
chr4 (181-226)||(54713097-54713142)
chr4 (165-230)||(56257415-56257480)
chr4 (166-230)||(2253949-2254013)
chr4 (153-225)||(6975001-6975073)
chr4 (175-219)||(19878292-19878336)
chr4 (179-219)||(19936501-19936541)
chr4 (166-230)||(22923654-22923718)
chr4 (166-230)||(22928307-22928371)
chr4 (166-230)||(22984586-22984650)
chr4 (166-230)||(22998174-22998238)
chr4 (175-223)||(40952350-40952398)
chr4 (147-215)||(47181621-47181689)
chr4 (147-215)||(48402421-48402489)
chr4 (175-223)||(48603680-48603728)
chr4 (166-218)||(55936068-55936120)
chr4 (147-215)||(56364336-56364404)
[»] scaffold0018 (1 HSPs)
scaffold0018 (143-230)||(135834-135921)
[»] scaffold0149 (1 HSPs)
scaffold0149 (153-226)||(24674-24747)
[»] chr2 (32 HSPs)
chr2 (153-218)||(1961377-1961442)
chr2 (157-230)||(5559501-5559574)
chr2 (166-223)||(13333528-13333585)
chr2 (153-218)||(15119784-15119849)
chr2 (153-230)||(20218614-20218691)
chr2 (181-226)||(32308355-32308400)
chr2 (166-226)||(3121421-3121481)
chr2 (166-218)||(11726576-11726628)
chr2 (181-225)||(27331855-27331899)
chr2 (166-218)||(31024178-31024230)
chr2 (166-226)||(38465788-38465848)
chr2 (146-226)||(44089425-44089505)
chr2 (166-225)||(3098207-3098266)
chr2 (175-230)||(5559424-5559479)
chr2 (182-225)||(7079370-7079413)
chr2 (166-225)||(21183408-21183467)
chr2 (188-231)||(23143589-23143632)
chr2 (188-231)||(23555379-23555422)
chr2 (147-218)||(25270863-25270934)
chr2 (166-225)||(25270937-25270996)
chr2 (166-220)||(13333452-13333506)
chr2 (185-226)||(1961308-1961349)
chr2 (165-230)||(7650185-7650250)
chr2 (181-226)||(11726495-11726539)
chr2 (147-220)||(41056893-41056966)
chr2 (175-224)||(42530582-42530631)
chr2 (166-226)||(8510586-8510646)
chr2 (166-226)||(13994271-13994330)
chr2 (166-226)||(23378023-23378083)
chr2 (179-215)||(38112507-38112543)
chr2 (166-218)||(41056969-41057021)
chr2 (143-230)||(41153173-41153260)
[»] scaffold0009 (1 HSPs)
scaffold0009 (166-226)||(145967-146027)


Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 344
Target Start/End: Complemental strand, 27764807 - 27764481
Alignment:
Q  18 agttcttctagtagagattaattcattttatagtatactcctagatagagttgaaatataattagagatactctctccggtcactattataagcnnnnnn 117  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  27764807 agttcttctaatagagattaattcattttatagtatactcctagatagagttgaaatataattagagatactctctccggtcactattataagcaaaaaa 27764708  T
Q  118 nnnttaggtatgtgtttggtctataatttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtg 217  Q
       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  27764707 aaattaggtatgtgtttggtctataatttggtttatattatagacctaatacatgaattaagcaatgaatctaaaaggttcatttttgcttataatggtg 27764608  T
Q  218 atcggagggagtagagtagaagtacaatcagagataccaaattagagatagaaatataattactatcatatcaaataaaggatcaatataattgcatacc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27764607 atcggagggagtagagtagaagtacaatcagagataccaaattagagatagaaatataattactatcatatcaaataaaggatcaatataattgcatacc 27764508  T
Q  318 ttggcactgatagagtagaacaccaaa 344  Q
    |||||||||||||||||||||||||||    
T  27764507 ttggcactgatagagtagaacaccaaa 27764481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 10934684 - 10934749
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  10934684 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtag 10934749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 17986266 - 17986339
Alignment:
Q  157 atagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||| ||||||| | ||||| |||||| |||||| ||| |||||| ||||||||||||||||||| |||||    
T  17986266 atagactaaatacatcatttaatgaatgaacctaaaaagttgatttttacttataatagtgatcggagagagta 17986339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27976807 - 27976859
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||||||||    
T  27976807 atacattaattattcaatgaatctaaaaagatcatttttgcttataatagtga 27976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 28034076 - 28034128
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||||||||    
T  28034076 atacattaattattcaatgaatctaaaaagatcatttttgcttataatagtga 28034128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 27502960 - 27502902
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggag 224  Q
    |||||| | ||||| ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  27502960 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgatcggag 27502902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 2561681 - 2561734
Alignment:
Q  141 taatttggtttatattatagacttaatacatgaattaatcaatgaatctaaaag 194  Q
    ||||||||| ||||||||||||  ||||||||||||||||||| ||| ||||||    
T  2561681 taatttggtctatattatagacgaaatacatgaattaatcaataaatttaaaag 2561734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 5888408 - 5888343
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  5888408 tattatagacaacatacatcatttaatgaatgaatctaaaacgttaatttttgcttataatagtga 5888343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 17871837 - 17871758
Alignment:
Q  151 tatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| |||  ||||||| | ||||| |||||| |||||| ||| |||||||||||||||| ||| | |||||||||    
T  17871837 tatattattgaccaaatacatcatttaatgaatgaacctaaaaagttgatttttgcttataataatgaccagagggagta 17871758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 17871821 - 17871896
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||||  ||| |||||||| ||||||| | ||||| |||||| ||||||  || ||||||||||||||||||||    
T  17871821 atttggtcaataatatagactaaatacatcatttaatgaatgaacctaaaaaattgatttttgcttataatagtga 17871896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 13964463 - 13964409
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtagagta 235  Q
    ||||||| ||||| ||| |||||||||||||||||||| | ||||| ||||||||    
T  13964463 aatgaatttaaaatgttgatttttgcttataatagtgaccagagggtgtagagta 13964409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 28882767 - 28882805
Alignment:
Q  188 ctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  28882767 ctaaaaggttgatttttgcttataatagtgaccggaggg 28882805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 32904468 - 32904518
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaa 193  Q
    ||||||| ||||||||||||  ||| ||||||||||||||| |||||||||    
T  32904468 atttggtctatattatagaccaaatgcatgaattaatcaataaatctaaaa 32904518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 44319571 - 44319521
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||| ||||||||||||| ||| | |||||||||||||||||| ||||||    
T  44319571 ttaataaatgaatctaaaatgttaacttttgcttataatagtgaccggagg 44319521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 44319597 - 44319667
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||||||||  |||||| | ||||| ||| | |||||||  || |||||||||||||||||||||||||    
T  44319597 tattatagactacatacatcatttaataaattattctaaaatattaatttttgcttataatagtgatcgga 44319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 11295723 - 11295666
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||| | ||||| |||| |||||||| ||| |||||||||||||||||||| ||||    
T  11295723 atacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtgaccgga 11295666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 11322677 - 11322706
Alignment:
Q  201 ttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||||||||||||||||||||    
T  11322677 ttttgcttataatagtgatcggagggagta 11322706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 45145559 - 45145588
Alignment:
Q  201 ttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||||||||||||||||||||    
T  45145559 ttttgcttataatagtgatcggagggagta 45145588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 2296546 - 2296474
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||||||||   |||||| | ||||| ||||||||||||| ||  | |||||||||||||| ||||||||||    
T  2296546 tattatagaccatatacatcatttaatgaatgaatctaaaatgtaaaattttgcttataataatgatcggagg 2296474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 7484698 - 7484746
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataata 214  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||    
T  7484698 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 7484746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 24471263 - 24471183
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||| || |||||  |||||| | || || |||| || ||||| ||| |||||||||||||||||||| |||||||    
T  24471263 tggtttataataaagactacatacatcattttatgaatgtatttaaaatgttgatttttgcttataatagtgaccggaggg 24471183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 24471273 - 24471317
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  24471273 aatgaatctaaaatgttaatttttgtttataatagtgaccggagg 24471317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 16121025 - 16121110
Alignment:
Q  145 ttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||| |||||||| |||  ||||||| | ||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  16121025 ttggtctatattattgaccaaatacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtgatcggagggagta 16121110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 26527269 - 26527189
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||| || |||||  |||||| | || || |||| |||||||| ||| ||||||||||||||||||||||||||||    
T  26527269 tggtttataataaagactacatacattattttatgaatgtatctaaaatgttgatttttgcttataatagtgatcggaggg 26527189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 26527271 - 26527330
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  26527271 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaacggagg 26527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 31996567 - 31996638
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggag 224  Q
    |||||||||||  |||||| | ||||| |||||| |||||| ||| |||||||||||||||||||| |||||    
T  31996567 tattatagactacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatagtgaccggag 31996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 32254902 - 32254967
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| | ||||| |||||||||||||  || | |||||||||||||||||||||||||| ||||    
T  32254902 atacatcatttaatgaatgaatctaaaatattaacttttgcttataatagtgatcggagggtgtag 32254967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 34379816 - 34379868
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  34379816 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 7055652 - 7055703
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| |||||| || |||||||||||||||  ||||||||||||||||    
T  7055652 tcaatgaacctaaaaagtacatttttgcttataaatgtgatcggagggagta 7055703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 3203740 - 3203666
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||| |||||| | | | | |||||| ||||||  || |||||||||||||||||||| |||||||||||    
T  3203740 tatagacttgatacatcattcattgaatgaacctaaaaaattgatttttgcttataatagtgaccggagggagta 3203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 5069999 - 5069934
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| ||||| |||||| |||||||| |||  |||||||||||||  |||||| ||||||||||    
T  5069999 atacattaattattcaatgtatctaaaaagttgttttttgcttataaatgtgatcagagggagtag 5069934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 12104804 - 12104747
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||| | ||||| ||||||| ||||| ||| |||||||||||||||||||| ||||    
T  12104804 atacatcatttaataaatgaatttaaaatgttgatttttgcttataatagtgaccgga 12104747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 26388259 - 26388336
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||| ||||||| ||||| |||||  || ||||| ||  | |||| ||||||||||||| |||||||||||    
T  26388259 tattatagactgaatacattaattattcaatatatataaaaagtggagtttttcttataatagtgaccggagggagta 26388336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 8449672 - 8449716
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||||  || |||||||||||||||||||| ||||||    
T  8449672 aatgaatctaaaatattaatttttgcttataatagtgaccggagg 8449716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 8458476 - 8458520
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||||  || |||||||||||||||||||| ||||||    
T  8458476 aatgaatctaaaatattaatttttgcttataatagtgaccggagg 8458520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 16199212 - 16199256
Alignment:
Q  174 attaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||    
T  16199212 attaatgaatgtatctaaaacgttgatttttgcttataatagtga 16199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 32254893 - 32254821
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||  |||||| | ||||  ||||| ||||||| ||| |||||| ||||||||||||| ||||||    
T  32254893 tattatagactacatacatcatttaacgaatgattctaaaatgttaatttttccttataatagtgaccggagg 32254821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 33689297 - 33689368
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||  |||||| | ||||| |||||| ||||| | || |||||||||| ||||||||||||||||    
T  33689297 tattatagactacatacatcatttaataaatgaaactaaatg-ttgatttttgcttttaatagtgatcggagg 33689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34170137 - 34170085
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  34170137 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtga 34170085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 39579564 - 39579638
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| ||||||| | ||||  ||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  39579564 tatagactaaatacatcacttaacgaatgaatctaaaaagttgatttttgcttataatagtgatcgaagggagta 39579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 331879 - 331939
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  331879 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggaggg 331939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 7882340 - 7882280
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  7882340 atacatcatttaattaatgaatctaaaatgttaatttttgcttataatagtgaccggaggg 7882280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 34327589 - 34327651
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggag 228  Q
    |||||| | ||||| ||||||||||||| ||| ||||||| |||||||| |||||||||||||    
T  34327589 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataataatgatcggagggag 34327651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 37897750 - 37897827
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||   |||||| | ||||| ||||||| ||||| ||| |||||||||||||||||||| | |||||||||    
T  37897750 tattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatagtgaccagagggagta 37897827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 41254012 - 41254077
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| | ||||| |||| |||||||| ||| |||||||||||||||| ||||||||||| ||||    
T  41254012 atacatcatttaataaatgtatctaaaatgttgatttttgcttataataatgatcggagggtgtag 41254077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 52215948 - 52216021
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||   |||||| | ||||| | ||||||||||| ||| |||||||||||||||||||| |||||||    
T  52215948 tattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccggaggg 52216021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 54783449 - 54783384
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| ||||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  54783449 tattatagaccacatacatcaattaattaatgaatctaaaatgttaatttttgtttataatagtga 54783384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 7829140 - 7829184
Alignment:
Q  182 atgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||    
T  7829140 atgaatctaaaatgttaattttagcttataatagtgatcggaggg 7829184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 39964364 - 39964288
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtaga 232  Q
    ||||||||  |||||| | ||| ||||||||||||||| ||   ||||||||||||||| ||| |||||||||||||    
T  39964364 tatagactacatacataatttattcaatgaatctaaaaagtagttttttgcttataataatgaccggagggagtaga 39964288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 40639790 - 40639850
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||| |||||||||||||||||||| |||||||    
T  40639790 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccggaggg 40639850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 54595849 - 54595797
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  54595849 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 7823964 - 7824007
Alignment:
Q  182 atgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||    
T  7823964 atgaatctaaaatgttaattttagcttataatagtgatcggagg 7824007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 21217225 - 21217166
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  21217225 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 21217166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 48191774 - 48191715
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  48191774 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataatagtgaccggagg 48191715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 24075497 - 24075447
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||| ||||||||||||| |||  ||||||||||||||||||| ||||||    
T  24075497 ttaatgaatgaatctaaaatgttgttttttgcttataatagtgaccggagg 24075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 29497432 - 29497362
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||| |||||| ||||||| ||||| |||||| |||||||| ||  | |||||||||||||||| ||||||    
T  29497432 tattgtagactgaatacattaattagtcaatgtatctaaaaagtaaaattttgcttataatagtaatcgga 29497362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 7826820 - 7826861
Alignment:
Q  182 atgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||||||||| ||| ||||| |||||||||||||||||||    
T  7826820 atgaatctaaaatgttaattttagcttataatagtgatcgga 7826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 8036610 - 8036529
Alignment:
Q  151 tatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtaga 232  Q
    ||||||||| ||| ||||||| | ||| |||||||| ||||||  |  || ||||||||||||||||| || ||||||||||    
T  8036610 tatattataaactaaatacatcagttattcaatgaacctaaaaaataaatatttgcttataatagtgaccgaagggagtaga 8036529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 8504894 - 8504849
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  |||||||||||||||||||| |||||||    
T  8504894 aatgaatctaaaatgtagatttttgcttataatagtgaccggaggg 8504849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 12744969 - 12745034
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||    
T  12744969 tattatagaccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatagtga 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 24694287 - 24694230
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||| |||||| ||||    
T  24694287 atacatcatttaataaatgaatctaaaatgttgatttttgcttatagtagtgaccgga 24694230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 24722759 - 24722694
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| |||||||||||||  || ||||||||||||||||||||    
T  24722759 tattatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtga 24722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 331870 - 331799
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||||||||   |||||| | ||||||||| ||| ||||| ||| |||||||||||||||||||| ||||||    
T  331870 tattatagaccacatacatcatttaatcaataaat-taaaatgttgatttttgcttataatagtgaccggagg 331799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 22497010 - 22496958
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| |||||||||||||  || ||||||||||||||||||||    
T  22497010 atacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 22496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 23642854 - 23642898
Alignment:
Q  182 atgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||  || ||||||||||||||||||||| ||||||    
T  23642854 atgaatctaaaatattgatttttgcttataatagtgataggaggg 23642898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 27224639 - 27224579
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||| ||||||||| ||| ||||||| |||||||||||| |||||||    
T  27224639 atacatcatttaatgaataaatctaaaatgttgatttttgtttataatagtgaccggaggg 27224579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 30519679 - 30519731
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| |||  |||||||||||||||||||    
T  30519679 atacatcatttaatgaatgaatctaaaatgttggtttttgcttataatagtga 30519731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 35239725 - 35239685
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaa 193  Q
    ||||||||||||||||||| ||||| |||||| ||||||||    
T  35239725 tattatagacttaatacattaattattcaatgtatctaaaa 35239685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 44382873 - 44382945
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||| || |||||  ||| || | ||||| |||| |||||||| ||| ||||||||||||||||||||    
T  44382873 tggtttataatacagactacatatatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 44382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 28038885 - 28038971
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagt 229  Q
    |||||||  ||| |||| ||| ||||||| | ||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  28038885 atttggtcaataatataaactaaatacatcatttaataaatgaatctaaaaagttgatttttgcttataatagtaatcggagggagt 28038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 28038909 - 28038820
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataata--gtgatcggagggagta 230  Q
    |||| ||||||||||| |||  ||||||  | ||||| ||||||||||||| ||| ||||||||||||||||  ||||||||||||||||    
T  28038909 atttagtttatattattgaccaaatacaacatttaatgaatgaatctaaaaagttaatttttgcttataatactgtgatcggagggagta 28038820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 24981922 - 24981981
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  24981922 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagg 24981981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 39940548 - 39940629
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggag 228  Q
    |||||||||| |||||||  |||||| | ||| | ||||||||||||| ||  |||||| |||||||||||||||||||||||    
T  39940548 tggtttatat-atagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtgatcggagggag 39940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 6156678 - 6156629
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  6156678 aatgaatctaaaaagttgatttttgtttataatagtgatcggaaggagta 6156629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 14967306 - 14967359
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgat 219  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||||    
T  14967306 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 1409145 - 1409193
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagt 229  Q
    ||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  1409145 aatgaatctaaaaagataatttttgcttataatagtgaccggagggagt 1409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 3013691 - 3013751
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||| |||||||||||||||||||| |||||||    
T  3013691 atacatcatttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccggaggg 3013751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 23398478 - 23398418
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| |||  ||||||||||||||||||| |||||||    
T  23398478 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggaggg 23398418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 46412753 - 46412705
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    ||||| |||||||||||||  || |||||||||||||||||||||||||    
T  46412753 ttaatgaatgaatctaaaatattaatttttgcttataatagtgatcgga 46412705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 50308710 - 50308622
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    ||||||| ||| |||| |||  ||||||| | ||||| ||| ||||||||| ||| |||||||||||||||||||| | || |||||||    
T  50308710 atttggtctatgttattgaccaaatacataatttaatgaataaatctaaaaagttgatttttgcttataatagtgaccagatggagtag 50308622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 50550200 - 50550260
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| ||| ||||||  ||||||||||||||||||||    
T  50550200 atacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcggaggg 50550260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 9676040 - 9675961
Alignment:
Q  151 tatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||| || |||| ||||||| | ||| | |||||| |||||| ||| |||||| ||||||||||||| |||||||||||    
T  9676040 tatataattgactaaatacattatttattaaatgaacctaaaaagttaatttttacttataatagtgaccggagggagta 9675961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 24419579 - 24419528
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||||| |||| |||||||||||||  |||| |||||||||||    
T  24419579 tcaatgaatctaaaaagttcttttttgcttataaatgtgaccggagggagta 24419528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 24981919 - 24981848
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||    
T  24981919 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttaatttttgcttataatagtga 24981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 32796842 - 32796889
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggag 228  Q
    ||||||||||||| ||  ||||||| ||||||||||||||||||||||    
T  32796842 aatgaatctaaaaagtgaatttttgtttataatagtgatcggagggag 32796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 15057703 - 15057657
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15057703 tcaatgaatctaaaaagtagttttttgcttataatagtgatcggagg 15057657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 29043523 - 29043449
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| ||||| | | ||| | |||||| |||||| ||| |||||||||||||||| ||| |||||||||||    
T  29043523 tatagactaaatacgtcatttattgaatgaacctaaaaagttgatttttgcttataataatgagcggagggagta 29043449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 38834680 - 38834606
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||  |||||| | ||| | |||||||||||||  |  |||||||||||||||||||| |||||||||||    
T  38834680 tatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataatagtgaccggagggagta 38834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 50155360 - 50155410
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaa 193  Q
    ||||||| ||||||||||||  ||||||| ||||| |||||||||||||||    
T  50155360 atttggtctatattatagaccaaatacatcaattactcaatgaatctaaaa 50155410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 5431436 - 5431485
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||    
T  5431436 aatgaatctaaaaagttaatttttgcttatattagtgaccggagagagta 5431485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 8338719 - 8338674
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  |||||||||||||||||||| |||||||    
T  8338719 aatgaatctaaaatgtagatttttgcttataatagtgaccggaggg 8338674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 10256825 - 10256776
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||| ||  |||||| ||||||||||||||||||| |||||    
T  10256825 aatgaatctaaaaagtgaattttttcttataatagtgatcggagagagta 10256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 34953992 - 34954037
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||    
T  34953992 aatgaatctaaaatataaatttttgcttataatagtgatcggaggg 34954037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 38737993 - 38738062
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataa 212  Q
    |||||||||||||| |||||   |||||| ||||| ||||||||||||||| ||| | |||| |||||||    
T  38737993 atttggtttatattctagacaagatacatcaattactcaatgaatctaaaaagttaaatttttcttataa 38738062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 45115266 - 45115311
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  |||||||||||||||||||| |||||||    
T  45115266 aatgaatctaaaatgtagatttttgcttataatagtgaccggaggg 45115311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 50308708 - 50308773
Alignment:
Q  165 aatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||| | ||||| ||||||  ||||| |||  ||||||||||||||||||||||||| |||||    
T  50308708 aatacatcatttaatgaatgaacttaaaatgttggtttttgcttataatagtgatcggagagagta 50308773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 748743 - 748787
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||||||||||||  ||  ||||||||||||||||||||||||    
T  748743 tcaatgaatctaaaaaattgttttttgcttataatagtgatcgga 748787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 5368855 - 5368919
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| |||||||| ||| ||||||||||||||   ||| |||||||||||    
T  5368855 atacattaattattcaatgcatctaaaaagttaatttttgcttataaatatgaccggagggagta 5368919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 33765855 - 33765915
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataat 213  Q
    ||||||||||   |||||| | ||||| ||||||||||||| ||| |||||||||||||||    
T  33765855 tattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataat 33765915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 34597564 - 34597524
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcg 221  Q
    ||||||||||||| ||  |||||||||||||||||||||||    
T  34597564 aatgaatctaaaaagtgaatttttgcttataatagtgatcg 34597524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 10437705 - 10437778
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||||  |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  10437705 tattatagactacatacataatttaataaatgaatctaaaatgttgatttttgcttataatagtgaccggaggg 10437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 22227039 - 22227126
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||  ||| |||||||| |||| || | ||||| |||||| |||||| ||| |||||||||||||||||||| ||||| |||||    
T  22227039 atttggtcaataatatagactaaatatatcatttaatgaatgaacctaaaacgttgatttttgcttataatagtgaccggagagagta 22227126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 3100477 - 3100411
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgat 219  Q
    |||||||||||  |||||| | ||| | ||||||||||||| ||| |||||||||||||||||||||    
T  3100477 tattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 8717803 - 8717852
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||||  || ||||||||||||||||||||||||||||||||    
T  8717803 aatgaacctaaaaatttgatttttgcttataatagtgatcggagggagta 8717852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 17625702 - 17625775
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatc 220  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  17625702 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 17625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 25694186 - 25694259
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagt 229  Q
    |||||||  ||||||| | ||||| |||||| ||| || ||| |||||||||||||||||||| ||||||||||    
T  25694186 tatagaccaaatacatcatttaatgaatgaacctagaaagttgatttttgcttataatagtgaccggagggagt 25694259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 43117430 - 43117385
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||||||  || ||||||||||||||||||||||||||||    
T  43117430 aatgaatctaaaatattgatttttgcttataatagtgatcggaggg 43117385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 892611 - 892560
Alignment:
Q  165 aatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagt 216  Q
    ||||||| ||||| ||||||||||||||| ||  ||||||||||||||||||    
T  892611 aatacattaattattcaatgaatctaaaaagtgaatttttgcttataatagt 892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 13391589 - 13391676
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||  ||| |||||||| ||||||| | ||| | |||||| |||||| ||| |||||||||||||| |||||  ||||||||||    
T  13391589 atttggtcaataatatagactaaatacataatttattgaatgaacctaaaaagttgatttttgcttataacagtgacaggagggagta 13391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 14772598 - 14772547
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||| |||||| |||||| ||| |||||||||||||||||||| |||||||    
T  14772598 ttaatgaatgaacctaaaatgttgatttttgcttataatagtgaccggaggg 14772547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 4297277 - 4297335
Alignment:
Q  165 aatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    ||||||| | ||||| ||||||| ||||| ||| ||||||| |||||||||||||||||    
T  4297277 aatacatcatttaattaatgaatataaaatgttgatttttgtttataatagtgatcgga 4297335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 5240298 - 5240220
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    ||||||| |||  |||||| ||||| |||||| ||||||||  |  | |||||||||||||||||| ||||||||||||    
T  5240298 tattatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatagtgaccggagggagtag 5240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 25792927 - 25792989
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggag 228  Q
    |||||| | ||||| |||||| |||||| ||  |||||||||||||||||||| |||||||||    
T  25792927 atacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagtgaccggagggag 25792989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 32911560 - 32911626
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttca-tttttgcttataatagtga 218  Q
    ||||||||||| ||||||| | ||||| |||||| |||||| ||| | |||||||||||||||||||    
T  32911560 tattatagactaaatacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagtga 32911626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 71365 - 71402
Alignment:
Q  189 taaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  71365 taaaatgttgatttttgcttataatagtgatcggaggg 71402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Complemental strand, 7604212 - 7604183
Alignment:
Q  201 ttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||||||||||||||||||||    
T  7604212 ttttgcttataatagtgatcggagggagta 7604183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 7613440 - 7613359
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggag 224  Q
    |||||||| ||| |||||||| |||||   | ||||| ||||||  ||||| ||| |||||||||||||||||||| |||||    
T  7613440 atttggttaataatatagactaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataatagtgaccggag 7613359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 11795780 - 11795735
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||||    
T  11795780 aatgaatctaaaatgttgatttttgcttatattagtgaccggaggg 11795735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 15549421 - 15549466
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  15549421 aatgaatctaaaatgttgatttttgtttataatagtgaccggaggg 15549466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 21032604 - 21032539
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||| ||||||| ||||| |||||| || ||||| ||  | ||||||||||||||||||    
T  21032604 tattatagactgaatacattaattattcaatgtatataaaaagtggagttttgcttataatagtga 21032539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 25694197 - 25694124
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagt 216  Q
    ||||||| |||||||| |||  ||||||| | ||||| |||||| ||| || ||| ||||||||||||||||||    
T  25694197 atttggtctatattattgacaaaatacatcatttaatgaatgaacctagaaagttgatttttgcttataatagt 25694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 40100131 - 40100082
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||| ||||| ||  |||||||||||||||||||| |||||||||||    
T  40100131 aatgaatttaaaaagtcaatttttgcttataatagtgaacggagggagta 40100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 18652846 - 18652898
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  18652846 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtga 18652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 29486572 - 29486644
Alignment:
Q  159 agacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    ||||| |||| || ||||| |||||| |||||||| ||    |||||||||||||||||||||||| ||||||    
T  29486572 agactaaatatattaattattcaatgtatctaaaaagtcagattttgcttataatagtgatcggagagagtag 29486644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 32911544 - 32911480
Alignment:
Q  151 tatattatagacttaatacatgaattaatcaatgaatctaaaaggttca-tttttgcttataata 214  Q
    ||||||||||||| ||||||| | ||||| |||||| |||||| ||| | |||||||||||||||    
T  32911544 tatattatagactaaatacatcatttaataaatgaacctaaaaagttgattttttgcttataata 32911480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 10095778 - 10095710
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtagagt 234  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  10095778 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtagagt 10095710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 25245224 - 25245284
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  25245224 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggaggg 25245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 2456382 - 2456331
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| |||||| ||  ||||||||||||||||||||||||||||||||    
T  2456382 tcaatgaacctaaaaagtagatttttgcttataatagtgatcggagggagta 2456331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 47535066 - 47535116
Alignment:
Q  181 aatgaatctaaaaggttcatttt-tgcttataatagtgatcggagggagta 230  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  47535066 aatgaatctaaaaggttatttttttgcttataatagtgatcggagggagta 47535116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 6455593 - 6455548
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  6455593 aatgaatctaaaatgtaaatttttgcttataatagtgatcggaggg 6455548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 23818496 - 23818431
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||| |  |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  23818496 tattatagattatatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 2943271 - 2943219
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  2943271 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 5950275 - 5950335
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| |||  ||||||||||||||||||| |||||||    
T  5950275 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggaggg 5950335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 43103131 - 43103071
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||| |||||||||||||||||||| |||||||    
T  43103131 atacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccggaggg 43103071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 3967751 - 3967700
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| |||||| ||   |||||||||||||||||||||||||||||||    
T  3967751 tcaatgaacctaaaaagtagttttttgcttataatagtgatcggagggagta 3967700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 41404074 - 41404015
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| | | |||||||||||||||||||| ||||||    
T  41404074 atacatcatttaatgaatgaatctaaaatgataatttttgcttataatagtgaccggagg 41404015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7701250 - 7701320
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtg 217  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| |||||||||||||||||||    
T  7701250 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtg 7701320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 8127923 - 8127973
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    ||||||||||||  ||| ||||||| |||||||||||| ||||||||||||    
T  8127923 aatgaatctaaacagttgatttttgtttataatagtgaccggagggagtag 8127973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 38940264 - 38940214
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    ||||||||||||| ||  |||||||||||||||| ||| ||||||||||||    
T  38940264 aatgaatctaaaatgtcaatttttgcttataataatgaccggagggagtag 38940214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 7701247 - 7701190
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||| | ||||| ||||||||||||| ||  |||||||||||||||||||| ||||    
T  7701247 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccgga 7701190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 12274905 - 12274950
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| || ||||||||||||||||||| | |||||||    
T  12274905 aatgaatctaaaaagtacatttttgcttataatagttaccggaggg 12274950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Complemental strand, 24155606 - 24155577
Alignment:
Q  201 ttttgcttataatagtgatcggagggagta 230  Q
    ||||||||||||||||||||||||||||||    
T  24155606 ttttgcttataatagtgatcggagggagta 24155577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 25774250 - 25774315
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||||||||  |||||| | ||| | ||||||||||||| ||  ||||||||||||||||||||    
T  25774250 tattatagactacatacatcatttagtgaatgaatctaaaatgtgtatttttgcttataatagtga 25774315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 31115677 - 31115742
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| |||||| |||||| ||| ||||||||||||||||||||    
T  31115677 tattatagaccacatacataatttaatgaatgaagctaaaatgttgatttttgcttataatagtga 31115742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 7295137 - 7295197
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||| ||||||| |||||||| |||||||||||    
T  7295137 atacatcatttaataaatgaatgtaaaatgttaatttttgtttataataatgatcggaggg 7295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21857128 - 21857064
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| ||||||  ||||||| ||  | |||||||||||||||||| |||||||||||    
T  21857128 atacattaattattcaatgtgtctaaaaagtaaacttttgcttataatagtgaccggagggagta 21857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 28229032 - 28228988
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| |||||| ||| | |||||||||||||||||||||||||    
T  28229032 aatgaagctaaaatgttaaattttgcttataatagtgatcggagg 28228988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 22720574 - 22720651
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||||||  |||||| ||||| |||||| |||||||| ||  | |||||||||||||||||| |||||||||||    
T  22720574 tattatagactgcatacattaattattcaatgtatctaaaaagtggagttttgcttataatagtgaccggagggagta 22720651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 34616277 - 34616353
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| |||||||||||||||||||||||||    
T  34616277 ggtttataatacagactatatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatcgga 34616353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 38382035 - 38381976
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  38382035 atacatcatttaatcaatgaatctaaaatgtaaatttttgcttataatagtgaccggagg 38381976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 45828477 - 45828527
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaa 193  Q
    ||||||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  45828477 atttggtttatattatagaccaaatacattaattactcaatgaatctaaaa 45828527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 14451001 - 14450956
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  14451001 aatgaatctaaaatgtagatttttgcttataatagtgatcggaggg 14450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2198107 - 2198043
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| |||||||| ||  | |||||||||||||||||| |||||||||||    
T  2198107 atacattaattattcaatgtatctaaaaagtggagttttgcttataatagtgaccggagggagta 2198043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 22235341 - 22235405
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| | ||| ||||||||||||||| ||   ||||||||||||||||||| |||||||||||    
T  22235341 atacatcagttattcaatgaatctaaaatgtgattttttgcttataatagtgaccggagggagta 22235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 23568461 - 23568521
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| |||  ||||||||||||||||||| |||||||    
T  23568461 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccggaggg 23568521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 24100822 - 24100758
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| ||||||||||||||| ||| ||| || |||||||||  ||||||||||||||    
T  24100822 atacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagggagta 24100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 38382037 - 38382109
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||| || |||||  |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||    
T  38382037 tggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 38382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 40575898 - 40575838
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||||||||||| |||||||||||| |||||||    
T  40575898 atacattatttaataaatgaatttaaaatgttcatttttgtttataatagtgaccggaggg 40575838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 53176367 - 53176307
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  53176367 atacatcatttaatgaatgaatataaaatgttaatttttacttataatagtgatcggaggg 53176307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 2582880 - 2582809
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggag 224  Q
    |||||||||||  |||||| | ||||| ||| |||||||||  || |||||||||||||||| |||||||||    
T  2582880 tattatagactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataataatgatcggag 2582809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 19878197 - 19878146
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||| ||||||||||||| ||| ||||||||||||| |||||| |||||||    
T  19878197 ttaatgaatgaatctaaaatgttaatttttgcttatattagtgaccggaggg 19878146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 16170978 - 16171048
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||||||||  |||||| | ||||| ||| ||||||||| ||| |||||| ||||||||||||| ||||    
T  16170978 tattatagactacatacatcatttaattaataaatctaaaatgttgatttttccttataatagtgaccgga 16171048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 43616216 - 43616290
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||| ||| ||||||| | ||||| ||||||| |||||  || ||||||||||||||||||||| ||| ||||||    
T  43616216 tatatactaaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagtgattggatggagta 43616290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 51313536 - 51313462
Alignment:
Q  156 tatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||| ||||||| |  || |||||||| |||||| || |||||||| ||||||  ||||||||||||||||    
T  51313536 tatagactaaatacattatgtattcaatgaagctaaaaagtacatttttgtttataaatgtgatcggagggagta 51313462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 19934734 - 19934779
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||    
T  19934734 aatgaatctaaaaaatagatttttgcttataatagtgatcggaggg 19934779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 21142162 - 21142097
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||| ||| ||||||| | |||||  |||||||||||| ||| ||||||| ||||||||||||    
T  21142162 tattataaactaaatacatcatttaatgcatgaatctaaaatgttgatttttgtttataatagtga 21142097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 47308158 - 47308113
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  47308158 aatgaatccaaaatgttgatttttgcttataatagtgatcgaaggg 47308113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 52914066 - 52914131
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| |||||||||||||  || ||||||||||||||||||||    
T  52914066 tattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 52914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 54713142 - 54713097
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||  |||||||||||||||||||| |||||||    
T  54713142 aatgaatctaaaatgtaaatttttgcttataatagtgaccggaggg 54713097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 56257415 - 56257480
Alignment:
Q  165 aatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||||| ||| ||||||||||||||| ||   ||||| ||||||||||||| ||||| |||||    
T  56257415 aatacatgagttattcaatgaatctaaaaagtaactttttacttataatagtgaccggagagagta 56257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2254013 - 2253949
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| | ||||| ||| |||||||||  || ||||||| |||||||| |||||||||||||||    
T  2254013 atacatcatttaatgaataaatctaaaaaattaatttttgtttataataatgatcggagggagta 2253949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 6975001 - 6975073
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||||||||  |||||| | | ||| |||||||  |||| ||| |||||||||||||||||||| ||||||    
T  6975001 tattatagactacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataatagtgaccggagg 6975073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 19878336 - 19878292
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgat 219  Q
    ||||| ||||||||||||| ||| ||||||||||||| |||||||    
T  19878336 ttaatgaatgaatctaaaatgttaatttttgcttatattagtgat 19878292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 19936541 - 19936501
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatagtgat 219  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  19936541 tcaatgaatctaaaaagttgatttttgtttataatagtgat 19936501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22923718 - 22923654
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| ||||||||  |  | |||||||||||||||||| |||||||||||    
T  22923718 atacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccggagggagta 22923654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22928371 - 22928307
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| ||||||||  |  | |||||||||||||||||| |||||||||||    
T  22928371 atacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccggagggagta 22928307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22984650 - 22984586
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| ||||||||  |  | |||||||||||||||||| |||||||||||    
T  22984650 atacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccggagggagta 22984586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22998238 - 22998174
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||| ||||| |||||| ||||||||  |  | |||||||||||||||||| |||||||||||    
T  22998238 atacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccggagggagta 22998174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 40952398 - 40952350
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    ||||| ||||||||||||| ||| ||| |||||||||||||||| ||||    
T  40952398 ttaatgaatgaatctaaaatgttgattattgcttataatagtgaacgga 40952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 47181621 - 47181689
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatag 215  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  47181621 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatag 47181689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 48402489 - 48402421
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatag 215  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  48402489 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatag 48402421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 48603680 - 48603728
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    ||||| ||||||||||||| ||| ||||||| ||| |||||||||||||    
T  48603680 ttaatgaatgaatctaaaatgttgatttttgtttacaatagtgatcgga 48603728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 55936068 - 55936120
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| |||||||||||||  || ||||||||||||||||||||    
T  55936068 atacatcatttaatgaatgaatctaaaatattgatttttgcttataatagtga 55936120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 56364404 - 56364336
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatag 215  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| |||||||||||||||||    
T  56364404 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatag 56364336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 135834 - 135921
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||| ||||||| ||   | ||||||||||||||| | |||| ||||||    
T  135834 atttgatttatattatagactaaatacataagttaatcaatgagtctaaaaagtaattgtttgcttataatagtaaccggatggagta 135921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 24674 - 24747
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||   |||||| | ||||| |||||||||||||  || |||||||||||||||||||| |||||||    
T  24674 tattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccggaggg 24747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 1961377 - 1961442
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  1961377 tattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 5559501 - 5559574
Alignment:
Q  157 atagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||| ||||||| | ||||| ||||||| ||||| ||| |||||||||||||| ||| || ||||||||||    
T  5559501 atagactaaatacataatttaatgaatgaatataaaaagttgatttttgcttataacagtaattggagggagta 5559574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 13333528 - 13333585
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcgga 223  Q
    |||||| | ||||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  13333528 atacatcatttaatcaatgaatctaaaatgtagatttttgcttataatagtgaccgga 13333585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 15119849 - 15119784
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    ||||||||||   |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  15119849 tattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 15119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 20218614 - 20218691
Alignment:
Q  153 tattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    |||||||||||  |||||| ||||| ||||||||||||||| ||   || ||||||||||||||||  ||||||||||    
T  20218614 tattatagactggatacatcaattattcaatgaatctaaaaagtgatttcttgcttataatagtgacaggagggagta 20218691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 32308355 - 32308400
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||    
T  32308355 aatgaatttataaggttaatttttgcttataatagtgatcggaggg 32308400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 3121481 - 3121421
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| |||||||||||||  || |||||||||||||||||||| |||||||    
T  3121481 atacattatttaataaatgaatctaaaatattgatttttgcttataatagtgaccggaggg 3121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 11726576 - 11726628
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  11726576 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 11726628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 27331855 - 27331899
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  27331855 aatgaatctaaaatgttgatttttgcttataatagtgaccggagg 27331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 31024230 - 31024178
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  31024230 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 38465848 - 38465788
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||| ||||||||| ||| |||||||||||||||||||| |||||||    
T  38465848 atacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggaggg 38465788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 44089505 - 44089425
Alignment:
Q  146 tggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||| ||||||||||||    ||||| | ||| ||||||||| |||||| |  ||||||||||||||||||||||||||||    
T  44089505 tggtctatattatagaccatgtacatcatttattcaatgaatataaaagatgtatttttgcttataatagtgatcggaggg 44089425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 3098207 - 3098266
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  3098207 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 3098266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 5559479 - 5559424
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||| |||||||||||||  || |||||| ||||||| |||||||||||||||||    
T  5559479 ttaataaatgaatctaaaaaattgatttttacttataacagtgatcggagggagta 5559424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 7079413 - 7079370
Alignment:
Q  182 atgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||    
T  7079413 atgaatttaaaatgttgatttttgcttataatagtgatcggagg 7079370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 21183408 - 21183467
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  21183408 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataacagtgaccggagg 21183467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 23143589 - 23143632
Alignment:
Q  188 ctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||    
T  23143589 ctaaaaagttgatttttgcttataatagtgaccggagggagtag 23143632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 23555379 - 23555422
Alignment:
Q  188 ctaaaaggttcatttttgcttataatagtgatcggagggagtag 231  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||    
T  23555379 ctaaaaagttgatttttgcttataatagtgaccggagggagtag 23555422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 25270934 - 25270863
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||||| || |||||  |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||    
T  25270934 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 25270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 25270937 - 25270996
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagg 225  Q
    |||||| | ||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  25270937 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 25270996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 13333506 - 13333452
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatc 220  Q
    |||||| | ||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  13333506 atacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 13333452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 1961349 - 1961308
Alignment:
Q  185 aatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||| ||  ||||||||||||||||||||||||||||    
T  1961349 aatctaaaatgtaaatttttgcttataatagtgatcggaggg 1961308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 7650250 - 7650185
Alignment:
Q  165 aatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggagggagta 230  Q
    ||||||| | ||||| ||||||  ||||| ||| ||||||||||| ||||||||||| ||||||||    
T  7650250 aatacatcatttaatgaatgaacttaaaaagttgatttttgcttacaatagtgatcgaagggagta 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 11726539 - 11726495
Alignment:
Q  181 aatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  11726539 aatgaatctaaaatgtt-atttttgcttataatagtgaccggaggg 11726495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 41056966 - 41056893
Alignment:
Q  147 ggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatc 220  Q
    |||||||| || |||||  |||||| | ||||| |||| ||||||||  || ||||||||||||||||||||||    
T  41056966 ggtttataatacagactacatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtgatc 41056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 42530582 - 42530631
Alignment:
Q  175 ttaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggag 224  Q
    ||||| ||||||| ||||| ||| |||||||||||||||||||| |||||    
T  42530582 ttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccggag 42530631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 8510586 - 8510646
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| |||||||| |||| |||  ||||||||||||||||||| |||||||    
T  8510586 atacatcatttaatgaatgaatccaaaatgttagtttttgcttataatagtgaccggaggg 8510646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 13994271 - 13994330
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| ||| | |||||||||||||||||| |||||||    
T  13994271 atacatcatttaatgaatgaatctaaaatgtt-agttttgcttataatagtgaccggaggg 13994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 23378023 - 23378083
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| |||||||||||||  || |||||||||||||||| ||| |||||||    
T  23378023 atacatcatttaataaatgaatctaaaatattaatttttgcttataataatgaccggaggg 23378083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 38112543 - 38112507
Alignment:
Q  179 tcaatgaatctaaaaggttcatttttgcttataatag 215  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  38112543 tcaatgaatctaaaatgttgatttttgcttataatag 38112507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41056969 - 41057021
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtga 218  Q
    |||||| | ||||| ||||||||||||| ||  ||||||||||||||||||||    
T  41056969 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 41057021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 41153173 - 41153260
Alignment:
Q  143 atttggtttatattatagacttaatacatgaattaatcaatgaatctaaaaggttcatttttgcttat-aatagtgatcggagggagta 230  Q
    ||||||| ||||||||| ||  ||||||| ||||| ||||||||||||||| ||  | |||| ||||| ||||| ||||||||||||||    
T  41153173 atttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaatag-gatcggagggagta 41153260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 146027 - 145967
Alignment:
Q  166 atacatgaattaatcaatgaatctaaaaggttcatttttgcttataatagtgatcggaggg 226  Q
    |||||| | ||||| ||||||||||||| | | ||||||| |||||||||||| |||||||    
T  146027 atacatcatttaatgaatgaatctaaaatgatgatttttgtttataatagtgaccggaggg 145967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University