View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9077_low_6 (Length: 707)

Name: NF9077_low_6
Description: NF9077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9077_low_6
NF9077_low_6
[»] chr7 (31 HSPs)
chr7 (19-689)||(38326624-38327297)
chr7 (406-468)||(27462428-27462490)
chr7 (405-468)||(19416520-19416583)
chr7 (405-460)||(10244733-10244788)
chr7 (405-468)||(16577852-16577915)
chr7 (405-468)||(16587747-16587810)
chr7 (409-468)||(19599155-19599214)
chr7 (405-468)||(40752831-40752894)
chr7 (405-462)||(18714454-18714511)
chr7 (393-446)||(21286344-21286397)
chr7 (405-453)||(44558781-44558829)
chr7 (405-468)||(21105609-21105672)
chr7 (405-468)||(31038514-31038577)
chr7 (409-468)||(41237916-41237975)
chr7 (391-450)||(41527552-41527611)
chr7 (405-468)||(46987092-46987155)
chr7 (405-468)||(47607902-47607965)
chr7 (405-467)||(5352335-5352397)
chr7 (394-468)||(5579688-5579762)
chr7 (409-467)||(19626518-19626576)
chr7 (406-468)||(27833393-27833455)
chr7 (405-467)||(46737791-46737853)
chr7 (394-443)||(3672569-3672618)
chr7 (405-450)||(8615029-8615074)
chr7 (405-466)||(43579047-43579108)
chr7 (405-468)||(2512312-2512378)
chr7 (405-468)||(20243261-20243325)
chr7 (392-448)||(25888893-25888949)
chr7 (405-465)||(38374186-38374246)
chr7 (405-453)||(42336076-42336124)
chr7 (406-458)||(45046217-45046269)
[»] chr4 (48 HSPs)
chr4 (405-468)||(56551584-56551647)
chr4 (405-467)||(47814244-47814306)
chr4 (405-468)||(2431003-2431066)
chr4 (405-464)||(10564461-10564520)
chr4 (405-468)||(11949755-11949818)
chr4 (401-468)||(22630352-22630419)
chr4 (409-468)||(43034334-43034393)
chr4 (394-468)||(28435240-28435314)
chr4 (405-470)||(42139850-42139915)
chr4 (405-461)||(20383494-20383550)
chr4 (405-468)||(3936633-3936696)
chr4 (405-468)||(7230286-7230349)
chr4 (405-468)||(9946433-9946496)
chr4 (405-468)||(16304090-16304153)
chr4 (394-468)||(6087742-6087816)
chr4 (405-461)||(675924-675980)
chr4 (405-465)||(16431622-16431682)
chr4 (412-468)||(49041973-49042029)
chr4 (405-468)||(836227-836290)
chr4 (394-468)||(2888868-2888943)
chr4 (405-468)||(5924655-5924718)
chr4 (405-468)||(11198334-11198397)
chr4 (405-468)||(19588160-19588223)
chr4 (394-453)||(19854560-19854619)
chr4 (409-468)||(19908702-19908761)
chr4 (405-460)||(20799394-20799449)
chr4 (405-468)||(23247590-23247653)
chr4 (405-468)||(23809955-23810018)
chr4 (405-468)||(24664983-24665046)
chr4 (409-468)||(24885792-24885851)
chr4 (409-468)||(32711790-32711849)
chr4 (405-468)||(35287499-35287562)
chr4 (405-468)||(43782297-43782360)
chr4 (405-448)||(51458684-51458727)
chr4 (405-468)||(54857607-54857670)
chr4 (405-468)||(10519141-10519208)
chr4 (394-468)||(19479469-19479543)
chr4 (394-460)||(22040645-22040711)
chr4 (405-446)||(2186347-2186388)
chr4 (405-466)||(14577501-14577562)
chr4 (394-447)||(34247435-34247488)
chr4 (409-462)||(40070966-40071019)
chr4 (405-446)||(52270044-52270085)
chr4 (405-461)||(897431-897487)
chr4 (405-445)||(21052572-21052612)
chr4 (406-458)||(23160047-23160099)
chr4 (405-453)||(46676505-46676553)
chr4 (394-446)||(49021761-49021813)
[»] chr2 (44 HSPs)
chr2 (405-468)||(22523004-22523067)
chr2 (405-466)||(7206131-7206192)
chr2 (405-468)||(35820293-35820356)
chr2 (409-468)||(27848167-27848227)
chr2 (394-462)||(29734686-29734754)
chr2 (405-468)||(10735823-10735886)
chr2 (405-468)||(22061293-22061356)
chr2 (405-468)||(24592838-24592901)
chr2 (405-468)||(25186234-25186297)
chr2 (405-468)||(29544633-29544696)
chr2 (409-468)||(34977214-34977273)
chr2 (405-468)||(44526134-44526197)
chr2 (405-467)||(8781643-8781705)
chr2 (394-468)||(41859847-41859921)
chr2 (405-466)||(41763872-41763933)
chr2 (405-445)||(9686463-9686503)
chr2 (405-461)||(20565074-20565130)
chr2 (405-461)||(43117189-43117245)
chr2 (409-468)||(2256981-2257040)
chr2 (405-468)||(20455897-20455960)
chr2 (405-468)||(30089055-30089118)
chr2 (405-468)||(30125659-30125722)
chr2 (409-468)||(31815879-31815938)
chr2 (405-468)||(42066718-42066781)
chr2 (405-468)||(44810711-44810774)
chr2 (405-467)||(19212964-19213026)
chr2 (405-447)||(25598575-25598617)
chr2 (406-468)||(41778936-41778998)
chr2 (405-466)||(4927443-4927504)
chr2 (407-468)||(11953954-11954014)
chr2 (422-467)||(42791318-42791363)
chr2 (409-445)||(231608-231644)
chr2 (412-468)||(660814-660870)
chr2 (394-458)||(8091160-8091224)
chr2 (405-445)||(9383224-9383264)
chr2 (405-445)||(10156023-10156063)
chr2 (405-453)||(12124551-12124599)
chr2 (396-468)||(20120713-20120785)
chr2 (405-453)||(21558813-21558861)
chr2 (405-461)||(22608533-22608589)
chr2 (405-453)||(24593382-24593430)
chr2 (405-461)||(31543018-31543074)
chr2 (410-470)||(37830724-37830784)
chr2 (405-461)||(43043164-43043220)
[»] scaffold0011 (2 HSPs)
scaffold0011 (394-468)||(7717-7791)
scaffold0011 (405-468)||(185269-185332)
[»] chr3 (46 HSPs)
chr3 (394-468)||(38130951-38131025)
chr3 (405-468)||(25340916-25340979)
chr3 (405-468)||(25441492-25441555)
chr3 (396-468)||(48849755-48849826)
chr3 (409-468)||(4601854-4601913)
chr3 (405-468)||(14827531-14827594)
chr3 (405-460)||(24428473-24428528)
chr3 (405-468)||(29631192-29631255)
chr3 (405-468)||(35863805-35863868)
chr3 (405-468)||(45431954-45432017)
chr3 (405-468)||(45885469-45885532)
chr3 (394-468)||(53996294-53996368)
chr3 (405-448)||(977953-977996)
chr3 (405-468)||(2662098-2662161)
chr3 (405-468)||(11358240-11358303)
chr3 (401-460)||(16663236-16663295)
chr3 (405-468)||(16792966-16793029)
chr3 (405-448)||(21914847-21914890)
chr3 (405-468)||(22722408-22722471)
chr3 (405-468)||(27185483-27185546)
chr3 (405-468)||(32843254-32843317)
chr3 (405-468)||(34899103-34899166)
chr3 (409-468)||(51882192-51882251)
chr3 (405-468)||(52119382-52119445)
chr3 (422-468)||(8075808-8075854)
chr3 (406-468)||(22799718-22799780)
chr3 (405-467)||(38034802-38034864)
chr3 (410-448)||(42398001-42398039)
chr3 (405-447)||(43345020-43345062)
chr3 (405-463)||(44579642-44579700)
chr3 (409-462)||(2186425-2186478)
chr3 (405-446)||(10498709-10498750)
chr3 (408-453)||(11969657-11969702)
chr3 (404-445)||(17507714-17507755)
chr3 (405-462)||(23147976-23148033)
chr3 (409-468)||(334839-334899)
chr3 (408-468)||(8136624-8136684)
chr3 (409-453)||(19468461-19468505)
chr3 (405-461)||(20400083-20400139)
chr3 (405-465)||(21506753-21506813)
chr3 (405-453)||(32629086-32629134)
chr3 (405-445)||(35392009-35392049)
chr3 (405-468)||(39100075-39100139)
chr3 (409-445)||(43011332-43011368)
chr3 (405-445)||(50570204-50570244)
chr3 (405-461)||(55126012-55126068)
[»] chr6 (26 HSPs)
chr6 (394-467)||(655742-655815)
chr6 (405-468)||(26400870-26400933)
chr6 (394-468)||(14296949-14297023)
chr6 (409-468)||(8569719-8569778)
chr6 (405-468)||(17151242-17151305)
chr6 (405-468)||(29740488-29740551)
chr6 (405-468)||(32053794-32053857)
chr6 (405-467)||(20744144-20744206)
chr6 (409-453)||(1918465-1918509)
chr6 (412-468)||(21598970-21599026)
chr6 (409-468)||(2726409-2726468)
chr6 (405-468)||(4455588-4455651)
chr6 (405-468)||(5040825-5040888)
chr6 (405-460)||(7081654-7081709)
chr6 (405-460)||(8637437-8637492)
chr6 (405-468)||(13376318-13376381)
chr6 (405-448)||(18254113-18254156)
chr6 (405-468)||(21847200-21847263)
chr6 (409-460)||(31971539-31971590)
chr6 (405-468)||(33824887-33824950)
chr6 (405-466)||(2473609-2473670)
chr6 (405-446)||(8810646-8810687)
chr6 (405-462)||(9392666-9392723)
chr6 (423-468)||(15187087-15187132)
chr6 (423-468)||(15473474-15473519)
chr6 (405-468)||(34828312-34828376)
[»] scaffold0180 (1 HSPs)
scaffold0180 (405-468)||(17738-17800)
[»] chr8 (35 HSPs)
chr8 (405-468)||(32051524-32051587)
chr8 (410-468)||(12800892-12800950)
chr8 (411-468)||(12748913-12748970)
chr8 (405-470)||(13286137-13286201)
chr8 (392-468)||(8717467-8717543)
chr8 (394-446)||(12910820-12910872)
chr8 (406-470)||(36781415-36781479)
chr8 (405-468)||(444419-444482)
chr8 (405-468)||(11708992-11709055)
chr8 (409-468)||(13357433-13357492)
chr8 (405-468)||(19163528-19163591)
chr8 (405-468)||(27587227-27587290)
chr8 (394-468)||(6235543-6235617)
chr8 (394-468)||(7996935-7997009)
chr8 (406-468)||(25136836-25136898)
chr8 (405-459)||(42208470-42208524)
chr8 (396-460)||(32421566-32421630)
chr8 (405-449)||(43962035-43962079)
chr8 (409-468)||(15001267-15001326)
chr8 (409-468)||(17898089-17898148)
chr8 (409-468)||(32944832-32944891)
chr8 (405-468)||(40679721-40679784)
chr8 (406-468)||(24838162-24838224)
chr8 (405-447)||(30427737-30427779)
chr8 (410-468)||(37141368-37141426)
chr8 (405-450)||(11771713-11771758)
chr8 (405-458)||(24195255-24195308)
chr8 (405-462)||(37938501-37938558)
chr8 (394-446)||(2554226-2554278)
chr8 (405-453)||(9656004-9656052)
chr8 (392-468)||(17704006-17704082)
chr8 (405-453)||(19778071-19778119)
chr8 (405-453)||(23852917-23852965)
chr8 (405-465)||(39821890-39821950)
chr8 (409-453)||(40795387-40795431)
[»] chr5 (34 HSPs)
chr5 (405-468)||(22522793-22522856)
chr5 (405-466)||(16133059-16133120)
chr5 (409-462)||(20721060-20721113)
chr5 (392-453)||(20927632-20927693)
chr5 (405-468)||(6489013-6489076)
chr5 (405-468)||(6624782-6624845)
chr5 (409-468)||(13864354-13864413)
chr5 (405-468)||(17090872-17090935)
chr5 (405-468)||(28207138-28207201)
chr5 (405-468)||(37932336-37932399)
chr5 (405-468)||(40715941-40716004)
chr5 (394-468)||(18331702-18331776)
chr5 (394-467)||(10704324-10704397)
chr5 (407-468)||(26655472-26655533)
chr5 (407-468)||(26927057-26927118)
chr5 (394-446)||(18489090-18489142)
chr5 (409-453)||(35109410-35109454)
chr5 (405-468)||(3445239-3445302)
chr5 (405-468)||(16036833-16036896)
chr5 (405-468)||(26409259-26409322)
chr5 (405-468)||(34436857-34436920)
chr5 (394-468)||(11720889-11720962)
chr5 (392-462)||(12189985-12190055)
chr5 (406-468)||(23036699-23036761)
chr5 (405-467)||(34191439-34191501)
chr5 (409-467)||(40837896-40837954)
chr5 (405-462)||(31602823-31602880)
chr5 (409-450)||(41650949-41650990)
chr5 (405-468)||(4009872-4009936)
chr5 (405-453)||(18391606-18391654)
chr5 (404-468)||(18789041-18789105)
chr5 (405-468)||(24636639-24636703)
chr5 (422-462)||(39938781-39938821)
chr5 (405-445)||(42505878-42505918)
[»] chr1 (40 HSPs)
chr1 (405-468)||(8269360-8269423)
chr1 (405-468)||(34521182-34521245)
chr1 (405-464)||(25532979-25533038)
chr1 (405-468)||(34632175-34632238)
chr1 (405-468)||(42045364-42045427)
chr1 (405-468)||(45139998-45140061)
chr1 (405-468)||(52441503-52441566)
chr1 (405-467)||(18166608-18166670)
chr1 (406-468)||(39302952-39303014)
chr1 (406-462)||(13615610-13615666)
chr1 (405-453)||(19620582-19620630)
chr1 (405-461)||(26803450-26803506)
chr1 (394-462)||(33153878-33153946)
chr1 (405-448)||(3509953-3509996)
chr1 (409-468)||(6000135-6000194)
chr1 (413-468)||(8736449-8736504)
chr1 (409-468)||(9265828-9265887)
chr1 (405-468)||(17139509-17139572)
chr1 (409-468)||(27172714-27172773)
chr1 (405-468)||(41884797-41884860)
chr1 (405-468)||(42888581-42888644)
chr1 (405-468)||(47528439-47528502)
chr1 (405-467)||(41763148-41763210)
chr1 (405-466)||(26755622-26755683)
chr1 (405-462)||(40680490-40680547)
chr1 (405-462)||(43611430-43611487)
chr1 (405-446)||(49183179-49183220)
chr1 (405-468)||(3481566-3481630)
chr1 (405-445)||(8253745-8253785)
chr1 (405-468)||(13094032-13094098)
chr1 (412-468)||(17651372-17651428)
chr1 (405-468)||(24752639-24752703)
chr1 (394-446)||(25086478-25086530)
chr1 (405-461)||(28016189-28016245)
chr1 (396-468)||(28832163-28832235)
chr1 (405-445)||(34142379-34142419)
chr1 (405-453)||(38448873-38448921)
chr1 (414-458)||(39252148-39252192)
chr1 (405-453)||(47961296-47961344)
chr1 (405-468)||(52494062-52494126)
[»] scaffold0735 (1 HSPs)
scaffold0735 (405-468)||(1534-1597)
[»] scaffold0118 (2 HSPs)
scaffold0118 (405-459)||(40004-40058)
scaffold0118 (409-453)||(45422-45466)
[»] scaffold0021 (1 HSPs)
scaffold0021 (394-468)||(161136-161210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (406-467)||(3308-3369)
[»] scaffold0896 (1 HSPs)
scaffold0896 (405-446)||(3147-3188)
[»] scaffold0122 (1 HSPs)
scaffold0122 (394-443)||(31172-31221)
[»] scaffold0040 (2 HSPs)
scaffold0040 (405-462)||(58859-58916)
scaffold0040 (405-453)||(53784-53832)
[»] scaffold0026 (1 HSPs)
scaffold0026 (407-468)||(75333-75394)
[»] scaffold0005 (1 HSPs)
scaffold0005 (405-466)||(239813-239874)


Alignment Details
Target: chr7 (Bit Score: 539; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 19 - 689
Target Start/End: Complemental strand, 38327297 - 38326624
Alignment:
Q  19 tgtgtacggctattgactcgagtgtgaagttgtttgggtccacggaagagtgcaccacgagtctcttccttaatggcttcctcttccttatgattttgcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38327297 tgtgtacggctattgactcgagtgtgaagttgtttgggtccacggaagagtgcaccacgagtctcttccttaatggcttcctcttccttatgattttgcc 38327198  T
Q  119 catagatactgcaactacaaacatcaaaaacattgtttggctatgaagttattcgaacgaggacaattataatgaattagattagatttatgtttatggt 218  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38327197 catagatactgcaactacaaacatcaaacacattgtttggctatgaagttattcgaacaaggacaattataatgaattagattagatttatgtttatggt 38327098  T
Q  219 ccctaaaattttgccaatgttttattccctgtgatttgtttatccctctaaaacctgaaattacttgtttggtcttagtaaaatgaacaaattttgattt 318  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38327097 ccctaaaattttgccagtgttttattccctgtgatttgtttatccctctaaaacctgaaattacttgtttggtcttagtaaaatgaacaaattttgattt 38326998  T
Q  319 tgtccatacaaaaatctctcttgtttaaattcctttgaaatgtttcccttgtgtttaaaaatgtcctaatacttatccttgggagattagctcagttggt 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  38326997 tgtccatacaaaaatctctcttgtttaaattcctttgaaatgtttcccttgtgtttaaaaatgtcctaatatttatccttgtgagtttagctcagttggt 38326898  T
Q  419 attgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc---nnnnnnnntgtcctaatattcgatttggttcaaattttannnnnn 515  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||          
T  38326897 atggacaaaacataatacatgcaaggtccgaggttgaaaccccggccaccgcaaaaaaaaaaagttcctaatattcgatttggttcaaattttatttttt 38326798  T
Q  516 nncaacaacaatcttagttatttgatacaattcggcttaaaaactagttcgattcnnnnnnntacattccaatttttgtaaaggtaattttggttcagct 615  Q
      |||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  38326797 ttcaacaacaatcttagttatttgatacaattcggcttaaaaaccagttcgattcaaaaaaatacattccaatttttgtaaaggtaattttggttcagct 38326698  T
Q  616 tgaaactacataaccagtgcaccaaatctctcgcaattcggtttgtgacgaatcagtaacggcttggttctgtg 689  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38326697 tgaaactacataaccaatgcaccaaatctctcgcaattcagtttgtgacgaatcagtaacggcttggttctgtg 38326624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 27462490 - 27462428
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  27462490 tagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 27462428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 19416520 - 19416583
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  19416520 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 19416583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 10244733 - 10244788
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||||    
T  10244733 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 10244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 16577915 - 16577852
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  16577915 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16577852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 16587747 - 16587810
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  16587747 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16587810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 19599155 - 19599214
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  19599155 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 40752894 - 40752831
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||| ||||  |||||||||||||    
T  40752894 ttagctcagttagtatggacaatacataatatatgcaatgtccggggttcgaaccccggccacc 40752831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 18714454 - 18714511
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||||||    
T  18714454 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaaccccg 18714511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 21286344 - 21286397
Alignment:
Q  393 atccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    ||||||| ||| |||||||| ||||||| |||||||||||||| ||||||||||    
T  21286344 atccttgagagcttagctcaattggtatggacaatacataatatatgcaaggtc 21286397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 44558829 - 44558781
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||| |||||| ||||||| |||||||||| ||||||    
T  44558829 ttagctcagttggtatggacaatgcataatatatgcaaggtctgaggtt 44558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 21105609 - 21105672
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| || ||| ||||||| ||||||||| |||||||  ||||||| |||||    
T  21105609 ttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaaccccgaccacc 21105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 31038577 - 31038514
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||| |  |||||||||| | |||| ||||||||||||||    
T  31038577 ttagctcagttggtatggacaatgcatattgtatgcaaggtctggggttcaaaccccggccacc 31038514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 41237975 - 41237916
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||| ||||| || |||||    
T  41237975 ctcagttggtatggacaatacgtaatatatgcaaggttcgaggttcaaacctcgaccacc 41237916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 450
Target Start/End: Original strand, 41527552 - 41527611
Alignment:
Q  391 ttatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgag 450  Q
    ||||||| | ||| |||||| ||||||||| |||||| ||||||| ||||||||||||||    
T  41527552 ttatcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggtccgag 41527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 46987092 - 46987155
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||  |||||||| ||||    
T  46987092 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacacc 46987155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 47607965 - 47607902
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||| ||||||||| |||||||||||  |||| |||| |||||||||    
T  47607965 ttagctcagttggtagggacattacataatatatgcaaggtccagggttcaaactccggccacc 47607902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 5352335 - 5352397
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||  |||||||||||||| || ||||||||||| ||  || |||||||||    
T  5352335 ttagctcagttggtaaggacaatacataatatatacaaggtccgagattcgaatcccggccac 5352397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 5579688 - 5579762
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||  |||| | ||||||| |||||||||| | |||| |||||||| |||||    
T  5579688 tccttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttcaaaccccgaccacc 5579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 19626576 - 19626518
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  19626576 ctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaacaccggccac 19626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 27833455 - 27833393
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||  |||||| ||||||| ||| |||||||| |||| |||||||| |||||    
T  27833455 tagctcagttggtaaggacaatgcataatatatgtaaggtccggggttcaaaccccgaccacc 27833393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 46737791 - 46737853
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    ||||||||||| || | |||||| ||||||| |||||||||||| |||| |||| ||||||||    
T  46737791 ttagctcagtttgtttggacaatgcataatatatgcaaggtccggggttcaaacaccggccac 46737853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 3672618 - 3672569
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaag 443  Q
    |||||| ||| |||||||||||| ||| |||||||||||||| |||||||    
T  3672618 tccttgtgagtttagctcagttgatatggacaatacataatatatgcaag 3672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 8615029 - 8615074
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgag 450  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||    
T  8615029 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgag 8615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 43579108 - 43579047
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||| |||||||||||||| ||||  ||||  |||||||||||    
T  43579108 ttagctcagttggtagggacaatgcataatacatgcaaagtcctgggttcgaaccccggcca 43579047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 2512312 - 2512378
Alignment:
Q  405 ttagctcagttggtattgacaata---cataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||||  |||||    ||||||| ||||||||| ||||||| ||||||||||||||    
T  2512312 ttagctcagttggtatgaacaatgtagcataatatatgcaaggtacgaggttcaaaccccggccacc 2512378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 20243261 - 20243325
Alignment:
Q  405 ttagctcagttggtattgacaatacataat-acatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||||| | |||||||||||| ||||  |||||||| ||||    
T  20243261 ttagctcagttggtatggacaatgcataataatatgcaaggtccggggtttgaaccccggacacc 20243325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 25888893 - 25888949
Alignment:
Q  392 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||| ||| |||||||||||||||  ||| || ||||||| ||||||||||||    
T  25888893 tatccttgtgagcttagctcagttggtaaggacgatgcataatatatgcaaggtccg 25888949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 38374246 - 38374186
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcc 465  Q
    |||||||| ||||||| |||||| |||| || |||||||||||  |||| |||||||||||    
T  38374246 ttagctcaattggtatggacaatgcatagtatatgcaaggtccagggttcaaaccccggcc 38374186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 42336076 - 42336124
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||| ||  |||||| |||||||||||||||||||| ||||    
T  42336076 ttagctcagttgataaggacaatgcataatacatgcaaggtccggggtt 42336124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 45046269 - 45046217
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaac 458  Q
    ||||||||||| ||| |||| ||||||||| |||||||||||| |||| ||||    
T  45046269 tagctcagttgatatggacagtacataatatatgcaaggtccggggttcaaac 45046217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 56551647 - 56551584
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  56551647 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccacc 56551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 47814306 - 47814244
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| |||| |||||||||||||    
T  47814306 ttagctcagttggtatggacaacacataatatatgcaaggtccggggttcaaaccccggccac 47814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 2431003 - 2431066
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||||||||||||||||| | |||||||||  |||||| |||||||| |||||    
T  2431003 ttagctcagttggtattgacaatacataaaatatgcaaggtatgaggttcaaaccccgaccacc 2431066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 10564520 - 10564461
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggc 464  Q
    |||||||||||||||| |||||||||||||| ||| |||||| |||||| ||||||||||    
T  10564520 ttagctcagttggtatggacaatacataatatatgtaaggtctgaggttcaaaccccggc 10564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 11949818 - 11949755
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  11949818 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 11949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 468
Target Start/End: Complemental strand, 22630419 - 22630352
Alignment:
Q  401 gagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||||||| |||||| |||||||| |||||    
T  22630419 gagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacc 22630352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 43034393 - 43034334
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  43034393 ctcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 43034334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 28435314 - 28435240
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||||| || |||| ||||||| ||||||    
T  28435314 tccttgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaaccccagccacc 28435240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 42139850 - 42139915
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 470  Q
    |||||| | ||||||| |||||| |||||||||||||| ||||| |||| ||||||||||||||||    
T  42139850 ttagcttatttggtatggacaatgcataatacatgcaatgtccggggttcaaaccccggccaccgc 42139915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 20383494 - 20383550
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| |||||||    
T  20383494 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacccc 20383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 3936633 - 3936696
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||||  ||||| ||||||| |||||||||||| ||||  |||||||||||||    
T  3936633 ttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 3936696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 7230286 - 7230349
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  7230286 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 7230349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 9946433 - 9946496
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| |||||||| |||||    
T  9946433 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccacc 9946496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 16304153 - 16304090
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| | || ||||| ||||||||    
T  16304153 ttagctcagttggtatggacaatgcataatatatgcaaggtccgggattcaaaccgcggccacc 16304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 6087742 - 6087816
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||| || ||| ||||||| |||||||||| | |||| ||||||| ||||||    
T  6087742 tccttgtgagcttagctcagttggtatagataatgcataatatatgcaaggtctggggttcaaaccccagccacc 6087816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 675924 - 675980
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| |||| |||||||    
T  675924 ttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaacccc 675980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 16431622 - 16431682
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcc 465  Q
    |||||||||||||||| |||||| ||||| | |||||||||| | |||| |||||||||||    
T  16431622 ttagctcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggcc 16431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 49042029 - 49041973
Alignment:
Q  412 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| ||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  49042029 agttgatatagacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 49041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 836290 - 836227
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| || |||| ||||||||||||||||| |||| ||| |||||    
T  836290 ttagctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgaccacc 836227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 2888868 - 2888943
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||  ||||| |  |||||| |||||||||||| |||| ||||||||||||||    
T  2888868 tccttgtgagcttagctcagttggtagggacaaatgtataatatatgcaaggtccgcggttcaaaccccggccacc 2888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 5924655 - 5924718
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||| |||||||||||||| ||| |||||||| |||| ||||| || |||||    
T  5924655 ttagctcagttgctatggacaatacataatatatggaaggtccggggttcaaacctcgaccacc 5924718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 11198334 - 11198397
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| | || |||||  ||||||| |||||||||||| |||| ||||||||||||||    
T  11198334 ttagctcagttagaatggacaaggcataatatatgcaaggtccggggttcaaaccccggccacc 11198397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 19588160 - 19588223
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||| |||||| ||||| | |||||||||||  |||| ||||||||||||||    
T  19588160 ttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcaaaccccggccacc 19588223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 453
Target Start/End: Original strand, 19854560 - 19854619
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||| |||| ||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggtt 19854619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 19908702 - 19908761
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||  |||||| ||||||| |||||||||||||||||  ||||||| |||||    
T  19908702 ctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaaccccgaccacc 19908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 20799449 - 20799394
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| ||||||    
T  20799449 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccc 20799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 23247653 - 23247590
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||| |||||||| |||||  ||||||| |||||||||| | |||| ||||||||||||||    
T  23247653 ttagctcggttggtatggacaacgcataatatatgcaaggtctggggtttaaaccccggccacc 23247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 23809955 - 23810018
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||  ||||||| ||||||||| |  |||| ||||||||||||||    
T  23809955 ttagctcagttggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccacc 23810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 24665046 - 24664983
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| || ||| ||||||| |||||||||||| ||||  ||||||| |||||    
T  24665046 ttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccacc 24664983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 24885851 - 24885792
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||||||||| | |||||||||||||| || | |||| |||||||    
T  24885851 ctcagttggtatggacaatacataaaatatgcaaggtccgagtttcataccctggccacc 24885792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 32711849 - 32711790
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||| | ||||| ||||||||||| |||||| |||||||    
T  32711849 ctcagttggtatggacaatgcataaaatatgcatggtccgaggtttaaaccctggccacc 32711790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 35287562 - 35287499
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||||  ||||| ||||| | |||||||||||| ||||  |||||||||||||    
T  35287562 ttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttccaaccccggccacc 35287499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 43782360 - 43782297
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| | |||| ||||| || |||||    
T  43782360 ttagctcagttggtaatgacaatgcataatatatgcaaggtctgcggttcaaacctcgaccacc 43782297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 51458684 - 51458727
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  51458684 ttagctcagttggtatggacaatacataaaatatgcaaggtccg 51458727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 54857670 - 54857607
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||| ||||||||  ||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  54857670 ttagctcggttggtataaacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 54857607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 10519141 - 10519208
Alignment:
Q  405 ttagctcagttggtattgacaatacataata----catgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||||||    |||||||||| ||||||| ||||||||| ||||    
T  10519141 ttagctcagttggtatagacaatgcataatatatacatgcaaggttcgaggttcaaaccccggtcacc 10519208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 19479543 - 19479469
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||  |||  ||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  19479543 tccttgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19479469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 22040645 - 22040711
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||| ||| |||||||||||| ||| |||||| ||||||| ||||||||| || |||| ||||||    
T  22040645 tccttgcgagtttagctcagttgatatggacaatgcataatatatgcaaggttcggggttcaaaccc 22040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 2186388 - 2186347
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  2186388 ttagctcagttggtatggacaatgcataatatatgcaaggtc 2186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 14577562 - 14577501
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||| ||||||| |||||| |||||  ||| ||||||||||||    
T  14577562 ttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccggcca 14577501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 447
Target Start/End: Original strand, 34247435 - 34247488
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtcc 447  Q
    |||||| ||| |||||||||||||||  |||||| ||||||| |||||||||||    
T  34247435 tccttgtgagtttagctcagttggtaaggacaatgcataatatatgcaaggtcc 34247488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 409 - 462
Target Start/End: Complemental strand, 40071019 - 40070966
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    ||||||||||||  ||||| ||||||| ||||||||||||| ||| ||||||||    
T  40071019 ctcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccg 40070966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 52270085 - 52270044
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  52270085 ttagctcagttggtatggacaatgcataatatatgcaaggtc 52270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 897431 - 897487
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||| ||||||  |||||| ||| |||||||| |||| |||||||    
T  897431 ttagctcagttggtatggacaatgtataatatatgtaaggtccggggttcaaacccc 897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 21052612 - 21052572
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  21052612 ttagctcagttggtatggataatacataatatatgcaaggt 21052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 23160047 - 23160099
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaac 458  Q
    ||||||||||||||  |||||| ||||||| ||| ||||||||||||| ||||    
T  23160047 tagctcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaac 23160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 46676553 - 46676505
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||    
T  46676553 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggtt 46676505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 49021761 - 49021813
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||| ||| ||||| |||||||||| |||||||||||| | ||||||||||    
T  49021761 tccttgtgagtttagcgcagttggtatggacaatacataaaatatgcaaggtc 49021813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 22523067 - 22523004
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  22523067 ttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccacc 22523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 7206131 - 7206192
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||||||    
T  7206131 ttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtttaaaccccggcca 7206192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 35820356 - 35820293
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  35820356 ttagctcagttggtagggacaatgcataatacatgcaaggtccggggttcaaacctcggccacc 35820293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 27848167 - 27848227
Alignment:
Q  409 ctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||||| | ||||||| |||||||||||| |||| ||||||||||||||    
T  27848167 ctcagttggtattgacaaatgcataatatatgcaaggtccggggttcaaaccccggccacc 27848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 29734686 - 29734754
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||| ||| |||||||||||| ||| |||||| ||||||| |||||||||||| |||| ||||||||    
T  29734686 tccttgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccg 29734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 10735886 - 10735823
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  ||| || ||||||| |||||||||||| |||| ||||||||||||||    
T  10735886 ttagctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaaccccggccacc 10735823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 22061293 - 22061356
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| |||||||  ||||||||||| | ||||||||||||| ||| ||||||||||||||    
T  22061293 ttagctcaattggtatgtacaatacataaaatatgcaaggtccgatgttcaaaccccggccacc 22061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 24592901 - 24592838
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  24592901 ttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 24592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 25186297 - 25186234
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||| |||||| ||||||| |||||||||||| |||| ||||||| ||||||    
T  25186297 ttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccacc 25186234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 29544633 - 29544696
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||  |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  29544633 ttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 29544696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 34977214 - 34977273
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||||||||    
T  34977214 ctcagttggtatggacaatgcataatatatgcaaggtccggagtttaaaccccggccacc 34977273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 44526134 - 44526197
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| | |||||||||| | || ||||||||||||||    
T  44526134 ttagctcagttggtatggacaatgcataatatacgcaaggtccgggattcaaaccccggccacc 44526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 8781705 - 8781643
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||| ||||    
T  8781705 ttagctcagttggtatggacaatgcataatgtatgcaaggtccggggttcaaaccccgaccac 8781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 41859847 - 41859921
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| | |||||||||| | |||| ||||||||||||||    
T  41859847 tccttgtgagtttaactcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacc 41859921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 41763933 - 41763872
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||| |||||| |||| || ||||| |||||| |||| ||||||||||||    
T  41763933 ttagctcagttggtatggacaatgcatagtatatgcacggtccggggttcaaaccccggcca 41763872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 9686463 - 9686503
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  9686463 ttagctcagttggtatagacaatacataatatatgcaaggt 9686503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 20565130 - 20565074
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| |||||||    
T  20565130 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaacccc 20565074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 43117245 - 43117189
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||  |||||| ||||||| |||||||||| |||||| |||||||    
T  43117245 ttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaaacccc 43117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 2256981 - 2257040
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| |||||||||| | ||||  |||||||||||||    
T  2256981 ctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaaccccggccacc 2257040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 20455897 - 20455960
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||| |||||| ||||||| |||||||||||| ||||  || ||||||||||    
T  20455897 ttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccacc 20455960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 30089055 - 30089118
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| ||||| ||||||||    
T  30089055 ttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30089118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 30125659 - 30125722
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| ||||| ||||||||    
T  30125659 ttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30125722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 31815938 - 31815879
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||  |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  31815938 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 31815879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 42066718 - 42066781
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| || |||| |||||||||||| ||||  |||| ||||||||    
T  42066718 ttagctcagttggtatggacaatgcacaatatatgcaaggtccggggtttgaacctcggccacc 42066781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 44810711 - 44810774
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| |||||||||  | |||||||||||| |||||||||||| |||| ||||||| ||||||    
T  44810711 ttagcccagttggtagaggcaatacataatatatgcaaggtccggggttcaaaccccagccacc 44810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 19212964 - 19213026
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||| | | |||||||||||||| ||||||||| ||| ||| |||||| ||||||    
T  19212964 ttagctcagttgttttggacaatacataatatatgcaaggttcgaagttcaaaccctggccac 19213026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 25598617 - 25598575
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtcc 447  Q
    |||||||||||||||| |||||| ||||||| |||||||||||    
T  25598617 ttagctcagttggtatggacaatgcataatatatgcaaggtcc 25598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 41778998 - 41778936
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| | | |||||| ||||||| |||||||||||||||||  || ||||||||||    
T  41778998 tagctcagttgatttggacaatgcataatatatgcaaggtccgaggttcgaatcccggccacc 41778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 4927504 - 4927443
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||  ||||||| ||| |||||||| |||| ||||||||||||    
T  4927504 ttagctcagttggtagggacaaagcataatatatgtaaggtccggggttcaaaccccggcca 4927443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 11953954 - 11954014
Alignment:
Q  407 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||  |||||||||||||| |||||| |||| || || ||||||||||||||    
T  11953954 agctcagttggtagggacaatacataatatatgcaatgtccaagatt-aaaccccggccacc 11954014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 42791318 - 42791363
Alignment:
Q  422 gacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||| ||||||| |||||||||||| |||| |||||||||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggttcaaaccccggccac 42791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 445
Target Start/End: Complemental strand, 231644 - 231608
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||| |||||||||||||| |||||||||    
T  231644 ctcagttggtatggacaatacataatatatgcaaggt 231608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 660870 - 660814
Alignment:
Q  412 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||| |||||| ||||||| |||||||||||  |||| |||||||| |||||    
T  660870 agttggtatggacaatgcataatatatgcaaggtccagggttcaaaccccgaccacc 660814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 8091224 - 8091160
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaac 458  Q
    |||||| ||| ||| |||||| ||||| |||||| ||||||| |||||||||||| |||| ||||    
T  8091224 tccttgtgagcttatctcagtaggtatggacaatgcataatatatgcaaggtccggggttcaaac 8091160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 9383264 - 9383224
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  9383264 ttagctcagttggtatggacaatgcataatatatgcaaggt 9383224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 10156023 - 10156063
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||  |||||||||||||| |||||||||    
T  10156023 ttagctcagttggtaaggacaatacataatatatgcaaggt 10156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 12124551 - 12124599
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||    
T  12124551 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggtt 12124599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 20120785 - 20120713
Alignment:
Q  396 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||| ||| |||||||||||||||  |||||| ||||||| ||||||||| || |||| ||| ||||| ||||    
T  20120785 cttgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaatcccggacacc 20120713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 21558861 - 21558813
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    ||||||||| |||||  |||||| ||||||| |||||||||||||||||    
T  21558861 ttagctcagctggtaaggacaatgcataatatatgcaaggtccgaggtt 21558813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 22608533 - 22608589
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||  |||||| ||||||| |||||||||  |||||| |||||||    
T  22608533 ttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttcaaacccc 22608589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 24593382 - 24593430
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||    
T  24593382 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggtt 24593430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 31543018 - 31543074
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    ||||||||| |||||| || ||| ||||||| |||||||||||| |||| |||||||    
T  31543018 ttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaaacccc 31543074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 37830724 - 37830784
Alignment:
Q  410 tcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 470  Q
    ||||||||||  |||||||||||||| || |||| ||| || || ||||||||||||||||    
T  37830724 tcagttggtagggacaatacataatatatacaagatccaagattcaaaccccggccaccgc 37830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 43043220 - 43043164
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    ||||||| |||||||| |||||| ||||||  |||||||||||| |||| |||||||    
T  43043220 ttagctcggttggtatagacaatgcataatgtatgcaaggtccggggttcaaacccc 43043164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 7717 - 7791
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| ||||||||||||||||||| |||||||| |||||    
T  7717 tccttgcgagcttaactcagttggtatggacaatgcataaaacatgcaaggtccgaggttcaaaccccgaccacc 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 185269 - 185332
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | ||||||| |||| |||| ||||||||| ||||    
T  185269 ttagctcagttggtatggacaatgcataaaatatgcaagatccggggttcaaaccccggtcacc 185332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 38131025 - 38130951
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| ||| |||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  38131025 tccttgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 38130951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 25340979 - 25340916
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  25340979 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 25340916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 25441555 - 25441492
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  25441555 ttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 25441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 48849826 - 48849755
Alignment:
Q  396 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||| ||| ||| |||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  48849826 cttgtgagcttaactcagttggtat-gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 48849755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 4601854 - 4601913
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  4601854 ctcagttggtttggacaatgcataataaatgcaaggtccggggttcaaaccccggccacc 4601913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 14827531 - 14827594
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | ||||||| |||| |||| ||||||||||||||    
T  14827531 ttagctcagttggtatggacaatgcataaaatatgcaagatccggggtttaaaccccggccacc 14827594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 24428528 - 24428473
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||||||||||||| |||||| ||||||| |||||| |||||||||| ||||||    
T  24428528 ttagctcagttggtatggacaatgcataatatatgcaaagtccgaggttcaaaccc 24428473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 29631192 - 29631255
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| ||||||||| || | || ||||||||||||||    
T  29631192 ttagctcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccacc 29631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 35863868 - 35863805
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  35863868 ttagctcagttggtaaggacaatacataatatatgcaaggtctggggttcaaacctcggccacc 35863805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 45431954 - 45432017
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| |||| |||||| |||||||    
T  45431954 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccctggccacc 45432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 45885532 - 45885469
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||  | ||||||| |||||||||| |||||| ||||||||||||||    
T  45885532 ttagctcagttggtatggaccttgcataatatatgcaaggtctgaggttcaaaccccggccacc 45885469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 53996294 - 53996368
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||  || ||||||||||    
T  53996294 tccttgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaatcccggccacc 53996368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 977996 - 977953
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  977996 ttagctcagttggtatggacaatgcataatatatgcaaggtccg 977953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 2662098 - 2662161
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| ||||||||| ||| ||| |||| |||||||||    
T  2662098 ttagctcagttggtaaagacaatgcataatatatgcaaggttcgaagtttaaactccggccacc 2662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 11358240 - 11358303
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||| |||||||  |||||| ||||||| ||||||| |||| |||| ||||||||||||||    
T  11358240 ttagctcggttggtagcgacaattcataatatatgcaagatccggggttcaaaccccggccacc 11358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 16663295 - 16663236
Alignment:
Q  401 gagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    ||||||| |||||||||||| || ||| ||||||| |||||||||||| |||| ||||||    
T  16663295 gagattatctcagttggtatggataatgcataatatatgcaaggtccggggttcaaaccc 16663236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 16793029 - 16792966
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| |||||||||| |||||| ||||||| |||||||||||  |||| ||||||||| ||||    
T  16793029 ttagcacagttggtatagacaatgcataatatatgcaaggtccagggttcaaaccccggtcacc 16792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 21914890 - 21914847
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||    
T  21914890 ttagctcagttggtaatgacaatacataatgtatgcaaggtccg 21914847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 22722408 - 22722471
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| ||||  ||||| ||||| | ||||||||||||||||| |||||||| |||||    
T  22722408 ttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccacc 22722471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 27185483 - 27185546
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| |||||||||| | |||| ||||| || |||||    
T  27185483 ttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacctcgaccacc 27185546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 32843317 - 32843254
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||| | |||||| ||||| | |||||||||| | |||| ||||||||||||||    
T  32843317 ttagctcagttggtttggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacc 32843254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 34899103 - 34899166
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||  |||||| ||||||| |||||||||||| |||| |||||||| |||||    
T  34899103 ttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 34899166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 51882251 - 51882192
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| ||||||| |||  |||| ||||||||||||||    
T  51882251 ctcagttggtatggacaatgcataatatatgcaagatccagggttcaaaccccggccacc 51882192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 52119382 - 52119445
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| ||||||||| || ||||  |||||||||||||    
T  52119382 ttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaaccccggccacc 52119445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 8075808 - 8075854
Alignment:
Q  422 gacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  8075808 gacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 8075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 22799780 - 22799718
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||| |||  |||||| ||||| ||||||||||||||||||| ||||| || |||||    
T  22799780 tagctcagtttgtaaggacaatgcataaaacatgcaaggtccgaggttcaaacctcgaccacc 22799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 38034864 - 38034802
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    ||||||||||||||   |||||||||||| | |||||||||||| |||| ||||| |||||||    
T  38034864 ttagctcagttggttgggacaatacataaaatatgcaaggtccggggttcaaacctcggccac 38034802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 448
Target Start/End: Complemental strand, 42398039 - 42398001
Alignment:
Q  410 tcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  42398039 tcagttggtattgacaatgcataatatatgcaaggtccg 42398001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 43345062 - 43345020
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtcc 447  Q
    ||||||||||||||||  ||||||||||||| |||||||||||    
T  43345062 ttagctcagttggtatgaacaatacataatatatgcaaggtcc 43345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 44579642 - 44579700
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccgg 463  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  ||||||||    
T  44579642 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccccgg 44579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 409 - 462
Target Start/End: Complemental strand, 2186478 - 2186425
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||| |||||||||||||| ||| |||||| | |||| ||||||||    
T  2186478 ctcagttggtatggacaatacataatatatgtaaggtctggggttcaaaccccg 2186425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 10498750 - 10498709
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  10498750 ttagctcagttggtatggacaatgcataatatatgcaaggtc 10498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 11969702 - 11969657
Alignment:
Q  408 gctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    ||||||||||||  || ||| |||||||||||||||||||||||||    
T  11969702 gctcagttggtaaggaaaatgcataatacatgcaaggtccgaggtt 11969657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 445
Target Start/End: Complemental strand, 17507755 - 17507714
Alignment:
Q  404 attagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  17507755 attagctcagttgatattgacaatgcataatatatgcaaggt 17507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 23148033 - 23147976
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||||  |||||||||||||| |||| ||||||| ||||  |||||||    
T  23148033 ttagctcagttggtaaggacaatacataatatatgcgaggtccggggttcgaaccccg 23147976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 334899 - 334839
Alignment:
Q  409 ctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||||| | ||||| | |||||||||||| |||| ||||||||||||||    
T  334899 ctcagttggtatggacaaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 334839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 408 - 468
Target Start/End: Complemental strand, 8136684 - 8136624
Alignment:
Q  408 gctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||| |||||||| ||| || ||||||| ||||||||||| ||||| |||||||| |||||    
T  8136684 gctcggttggtatggacgatgcataatatatgcaaggtccaaggttcaaaccccgaccacc 8136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 19468461 - 19468505
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||||    
T  19468461 ctcagttggtatggacaatgcataatatatgcaaggtccgtggtt 19468505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 20400083 - 20400139
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    ||||||||||||  |  |||||||||||||| |||||||||| |||||| |||||||    
T  20400083 ttagctcagttgacagagacaatacataatatatgcaaggtctgaggttcaaacccc 20400139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 21506813 - 21506753
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcc 465  Q
    |||||||||||||||| |||||| ||||| | |||||||||| | ||||  ||||||||||    
T  21506813 ttagctcagttggtatggacaatgcataaaatatgcaaggtctggggtttgaaccccggcc 21506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 32629086 - 32629134
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||    
T  32629086 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggtt 32629134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 35392009 - 35392049
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    ||||||||||||||| ||||||||||||||| ||| |||||    
T  35392009 ttagctcagttggtaatgacaatacataatatatgtaaggt 35392049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 39100139 - 39100075
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccga-ggttgaaaccccggccacc 468  Q
    |||||||||||| |||  ||||| ||||||| ||||||||||||| |||| ||||| ||||||||    
T  39100139 ttagctcagttgttataaacaatgcataatatatgcaaggtccgatggttcaaacctcggccacc 39100075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 445
Target Start/End: Original strand, 43011332 - 43011368
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  43011332 ctcagttgatatagacaatacataatacatgcaaggt 43011368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 50570244 - 50570204
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  50570244 ttagctcagttggtatagacaatgcataatatatgcaaggt 50570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 55126012 - 55126068
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||| |   |||||||||||||| ||||||||| ||||||| |||||||    
T  55126012 ttagctcagttgatgaggacaatacataatatatgcaaggttcgaggttcaaacccc 55126068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 655815 - 655742
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||| ||||  ||||||||||||    
T  655815 tccttgtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaaccccggccac 655742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 26400870 - 26400933
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||  |||||||||||||    
T  26400870 ttagctcaattggtatggacaatacataatatatgcaaggtccggggtttgaaccccggccacc 26400933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 14297023 - 14296949
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||| ||||||||| |||||||||||| | ||| |||||||| |||| ||||||||||||||    
T  14297023 tccttgtgagcttagctgagttggtatggacaatacataaaatatgtaaggtccggggttcaaaccccggccacc 14296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 8569719 - 8569778
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||| ||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  8569719 ctcaattggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 8569778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 17151242 - 17151305
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| |||||||| ||||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  17151242 ttagctaagttggtagtgacaatacataatatatgcaaggtctggggttcaaacctcggccacc 17151305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 29740488 - 29740551
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||| |||||| ||||||| | |||||||||| |||| ||||||||||||||    
T  29740488 ttagctcaattggtatggacaatgcataatatacgcaaggtccggggttcaaaccccggccacc 29740551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 32053794 - 32053857
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| ||||||||| || |||| |||| |||||||||    
T  32053794 ttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacc 32053857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 20744144 - 20744206
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||| |||||| ||||||| |||||||||| | |||| |||||||| ||||    
T  20744144 ttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 1918509 - 1918465
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||    
T  1918509 ctcagttggtatagacaatgcataatatatgcaaggtccgaggtt 1918465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 468
Target Start/End: Original strand, 21598970 - 21599026
Alignment:
Q  412 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||  ||||||||||||| ||||||||| || |||| ||||||||||||||    
T  21598970 agttggtatgaacaatacataatatatgcaaggtacggggtttaaaccccggccacc 21599026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 2726468 - 2726409
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||||  |||||||| ||||    
T  2726468 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccccggtcacc 2726409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 4455651 - 4455588
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||  ||||||| |||||||||| | |||| |||||||| |||||    
T  4455651 ttagctcagttggtatggacaaggcataatatatgcaaggtctggggttcaaaccccgaccacc 4455588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 5040888 - 5040825
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  ||||| |||||||| ||||||||||||  ||| |||| |||||||||    
T  5040888 ttagctcagttggtaaagacaaaacataatatatgcaaggtccggtgttcaaactccggccacc 5040825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 7081709 - 7081654
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||||||||| ||  |||||||||||||| ||||||||||  ||||||||||||    
T  7081709 ttagctcagttgataaagacaatacataatatatgcaaggtctaaggttgaaaccc 7081654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 8637492 - 8637437
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||| ||||||||||  |||||| ||||||| ||||||||||||||||| ||||||    
T  8637492 ttagttcagttggtagggacaatgcataatatatgcaaggtccgaggttcaaaccc 8637437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 13376318 - 13376381
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||| |||||| ||||||||||||| |||||| ||||  ||||| |||||||    
T  13376318 ttagctcaattggtatggacaatgcataatacatgcatggtccggggttctaaccctggccacc 13376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 18254156 - 18254113
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||||||||||  |||||| ||||||||||||||||||||    
T  18254156 ttagctcagttggtaaggacaatgcataatacatgcaaggtccg 18254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 21847200 - 21847263
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| ||||||||| || ||||  || ||||||||||    
T  21847200 ttagctcagttggtagggacaatacataatatatgcaaggtacggggttcgaatcccggccacc 21847263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 460
Target Start/End: Original strand, 31971539 - 31971590
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||||||||||  |||||| ||||||| ||||||||||||||||| ||||||    
T  31971539 ctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 33824887 - 33824950
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||  |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  33824887 ttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 33824950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 2473609 - 2473670
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    ||||||||||| |||  |||||||||||||| |||||||||  | |||| ||||||||||||    
T  2473609 ttagctcagttagtagggacaatacataatatatgcaaggtatggggtttaaaccccggcca 2473670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 8810646 - 8810687
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  8810646 ttagctcagttggtaaagacaatacataatatatgcaaggtc 8810687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 9392723 - 9392666
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||| |||  | ||| ||||||| ||||||||||||||||| ||||||||    
T  9392723 ttagctcagttgttatgaaaaatgcataatatatgcaaggtccgaggtttaaaccccg 9392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 15187087 - 15187132
Alignment:
Q  423 acaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15187132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 15473519 - 15473474
Alignment:
Q  423 acaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15473474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 34828312 - 34828376
Alignment:
Q  405 ttagctcagttggtattgacaatacataat-acatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||||| | ||| |||||| ||||||  |||||||||||||    
T  34828312 ttagctcagttggtatggacaatgcataataatatgtaaggtctgaggttcgaaccccggccacc 34828376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 17738 - 17800
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||| ||||||    
T  17738 ttagctcagttggtatggacaatgcataatacatgcaaggtccg-ggttcaaaccccagccacc 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 32051587 - 32051524
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  32051587 ttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 32051524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 468
Target Start/End: Complemental strand, 12800950 - 12800892
Alignment:
Q  410 tcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||||||||||||| |||||||||||| |||| |||||||| |||||    
T  12800950 tcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 12800892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 468
Target Start/End: Original strand, 12748913 - 12748970
Alignment:
Q  411 cagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  12748913 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 12748970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 13286137 - 13286201
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 470  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||| |||| ||||||||||||||||    
T  13286137 ttagctcagttggtatagacaatgcataatatatgcaagatccg-ggttcaaaccccggccaccgc 13286201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 8717543 - 8717467
Alignment:
Q  392 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| | ||| |||||||||||||||| |||||| ||||||| ||||||||| || |||| ||||| ||||||||    
T  8717543 tatcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacctcggccacc 8717467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 12910872 - 12910820
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||| |||||||||||||||||||| |||||| ||||||| ||||||||||    
T  12910872 tccttgtgagattagctcagttggtatggacaatgcataatatatgcaaggtc 12910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 36781415 - 36781479
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccaccgc 470  Q
    ||||||||||||||  |||||||||||||| |||||| ||||| |||| |||||||| |||||||    
T  36781415 tagctcagttggtaaggacaatacataatatatgcaaagtccggggtttaaaccccgaccaccgc 36781479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 444419 - 444482
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||||||  |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  444419 ttagctcaattggtaaggacaatgcataatatatgcaaggtccggggtttaaaccccggccacc 444482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 11708992 - 11709055
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||| ||| |||||||| |||||    
T  11708992 ttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacc 11709055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 13357492 - 13357433
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||| ||||| ||||||||    
T  13357492 ctcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacctcggccacc 13357433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 19163591 - 19163528
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||| |||||    
T  19163591 ttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccacc 19163528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 27587227 - 27587290
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||| ||| |||||||||||| |||| ||||||||||||||    
T  27587227 ttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttcaaaccccggccacc 27587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 6235617 - 6235543
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||| ||| || ||||||| ||| |||||||| | || ||||||||||||||    
T  6235617 tccttgtgagtttagctcagttggtatggacgatgcataatatatgtaaggtccgggattcaaaccccggccacc 6235543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 7996935 - 7997009
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||||||||||| |||||  ||||||| |||||||||| | |||| |||||||| |||||    
T  7996935 tccttgtgagcttagctcagttggtatggacaacgcataatatatgcaaggtctggggttcaaaccccgaccacc 7997009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 25136898 - 25136836
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||| |||||  ||||| | ||||||||||||||||| ||||| ||||||||    
T  25136898 tagctcagttggtatggacaaggcataaaatatgcaaggtccgaggttcaaacctcggccacc 25136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 42208524 - 42208470
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacc 459  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||| |||||    
T  42208524 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacc 42208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 32421566 - 32421630
Alignment:
Q  396 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccc 460  Q
    |||| ||| ||| |||||||||||| ||||||| |||||| |||||||||||| |||| ||||||    
T  32421566 cttgtgagcttaactcagttggtatggacaatatataatatatgcaaggtccggggttcaaaccc 32421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 43962079 - 43962035
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccga 449  Q
    |||||||||||||||  |||||||||||||| |||||||||||||    
T  43962079 ttagctcagttggtaaggacaatacataatatatgcaaggtccga 43962035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 15001326 - 15001267
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||| | |||||| ||||| | ||||||||||| ||||| ||||||||||||||    
T  15001326 ctcagttggtttcgacaatgcataaaatatgcaaggtccaaggttcaaaccccggccacc 15001267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 17898089 - 17898148
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||||| |||||||| |||||||||||| | ||  |||||||||||||    
T  17898089 ctcagttggtatggacaaaacataatatatgcaaggtccgggattctaaccccggccacc 17898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 32944891 - 32944832
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| |||||| ||||| | |||||||||| |||||| |||||||| |||||    
T  32944891 ctcagttggtatggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccacc 32944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 40679784 - 40679721
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| | ||||| |||| | |||||||||||| |||| ||||| ||||||||    
T  40679784 ttagctcagttggtatggtcaatatataaaatatgcaaggtccggggttcaaacctcggccacc 40679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 24838224 - 24838162
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||   |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  24838224 tagctcagttggttaggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 24838162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 30427737 - 30427779
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtcc 447  Q
    |||||||||||||||| |||||| ||||||| |||||||||||    
T  30427737 ttagctcagttggtatggacaatgcataatatatgcaaggtcc 30427779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 468
Target Start/End: Original strand, 37141368 - 37141426
Alignment:
Q  410 tcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||||| ||||||| ||||||||| || |||| |||| |||||||||    
T  37141368 tcagttggtatggacaatgcataatatatgcaaggttcggggttcaaactccggccacc 37141426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 11771713 - 11771758
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgag 450  Q
    |||||||||||| ||  |||||||||||||| ||||||||||||||    
T  11771713 ttagctcagttgatagagacaatacataatatatgcaaggtccgag 11771758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 24195255 - 24195308
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaac 458  Q
    |||||||||||| |||  ||||||||||||| |||||||||||| |||| ||||    
T  24195255 ttagctcagttgatatgaacaatacataatatatgcaaggtccggggttcaaac 24195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 37938501 - 37938558
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||||| || ||| ||||||| |||||| |||||||||| ||| ||||    
T  37938501 ttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccg 37938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 2554278 - 2554226
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||| ||| |||||||||||| ||| |||||||||||| | ||||||||||    
T  2554278 tccttgtgagcttagctcagttgatatggacaatacataaaatatgcaaggtc 2554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 9656052 - 9656004
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||| | |||||||||||||||||    
T  9656052 ttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggtt 9656004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 392 - 468
Target Start/End: Original strand, 17704006 - 17704082
Alignment:
Q  392 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| | ||| |||||||||||||||  |||||| ||||||| |||||||||| | | || ||||| ||||||||    
T  17704006 tatcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctgtgattcaaacctcggccacc 17704082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 19778071 - 19778119
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||    
T  19778071 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggtt 19778119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 23852917 - 23852965
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||| ||||| |||||| ||||||| |||||||||||| ||||    
T  23852917 ttagctcagtcggtatggacaatgcataatatatgcaaggtccgtggtt 23852965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 39821890 - 39821950
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcc 465  Q
    |||||||||||||||  |||||| ||||||| |||||||||| | |||| |||||| ||||    
T  39821890 ttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaacccaggcc 39821950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 40795387 - 40795431
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    ||||||||||||  ||||||||||||| |||||||||||| ||||    
T  40795387 ctcagttggtatgaacaatacataatatatgcaaggtccggggtt 40795431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 22522856 - 22522793
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||| |||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  22522856 ttagctcggttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 22522793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 16133120 - 16133059
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||| ||||||| |||||||||| |||||| ||||||||||||    
T  16133120 ttagctcagttggtaaggacaatgcataatatatgcaaggtcagaggtttaaaccccggcca 16133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 462
Target Start/End: Original strand, 20721060 - 20721113
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| ||||||||    
T  20721060 ctcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccg 20721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 453
Target Start/End: Original strand, 20927632 - 20927693
Alignment:
Q  392 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||| ||| ||| |||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  20927632 tatctttgtgagcttagctcagttggtatggacaatacataatatatgcaagatccgaggtt 20927693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 6489013 - 6489076
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||||| | |||| ||||||||||||||    
T  6489013 ttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 6489076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 6624782 - 6624845
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||| || |||||| ||||||| |||||||||||| ||||  |||||||||||||    
T  6624782 ttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 6624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 13864354 - 13864413
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||  ||||||||||||| |||||||||||| |||| |||||||| |||||    
T  13864354 ctcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 13864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 17090872 - 17090935
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| || ||| ||||||  |||||||||||| |||| ||||||||||||||    
T  17090872 ttagctcagttggtatggataatgcataattaatgcaaggtccggggttcaaaccccggccacc 17090935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 28207138 - 28207201
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||||||||  || ||||||||||    
T  28207138 ttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaatcccggccacc 28207201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 37932336 - 37932399
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| ||||  ||||| |||||||    
T  37932336 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccctggccacc 37932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 40716004 - 40715941
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| ||| ||| |||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  40716004 ttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 40715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 18331702 - 18331776
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| |||||||| ||||||| |||||| ||||| | |||||||||||| |||| || |||||||||||    
T  18331702 tccttgtgagcttagctcacttggtatggacaatgcataaaatatgcaaggtccggggttcaagccccggccacc 18331776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 10704397 - 10704324
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||| ||| |||||||||||||||| |||||| ||||| | |||||||||||| |||| ||||  |||||||    
T  10704397 tccttgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaactacggccac 10704324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 26655472 - 26655533
Alignment:
Q  407 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||| |||||| ||||||| ||| |||||||| ||||  |||||||||||||    
T  26655472 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccacc 26655533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 26927057 - 26927118
Alignment:
Q  407 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||| |||||| ||||||| ||| |||||||| ||||  |||||||||||||    
T  26927057 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccggccacc 26927118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 18489142 - 18489090
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  18489142 tccttgtgagtttagctcagttggtatagacaatgcataatatatgcaaggtc 18489090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 35109410 - 35109454
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||  |||||||||||||| |||||||||||||||||    
T  35109410 ctcagttggtaaagacaatacataatatatgcaaggtccgaggtt 35109454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 3445302 - 3445239
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||  |||||||||||| |||| ||| ||||||||||    
T  3445302 ttagctcagttggtaaggacaatgcataatgtatgcaaggtccggggttcaaatcccggccacc 3445239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 16036833 - 16036896
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||| || |||||||||||||| |||||||||||  |||| |||| | |||||||    
T  16036833 ttagctcagttggcatggacaatacataatatatgcaaggtccatggttcaaactctggccacc 16036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 26409259 - 26409322
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| ||| |||||||| ||||  ||||||| |||||    
T  26409259 ttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccccgcccacc 26409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 34436857 - 34436920
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| |||||||| ||| |||| |||||||| |||||    
T  34436857 ttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaaccccgcccacc 34436920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 11720889 - 11720962
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| ||| |||||||||||  |||||| ||||||| ||||||||| || |||| ||||||||||||||    
T  11720889 tccttgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt-cggggttcaaaccccggccacc 11720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 12189985 - 12190055
Alignment:
Q  392 tatccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||| ||  |||||| ||||||||| |||||||||||||| ||| |||||| | |||| ||||||||    
T  12189985 tatccttgtgaacttagcttagttggtatggacaatacataatatatgtaaggtcgggggttcaaaccccg 12190055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 23036761 - 23036699
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||| ||||| |||||||| |||||||||  |||||| ||||| | ||||||    
T  23036761 tagctcagttggtatggacaaaacataatatatgcaaggttagaggttcaaacctcagccacc 23036699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 34191439 - 34191501
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    ||||||||||||||   |||||| ||||| | |||||||||||| |||| |||||||||||||    
T  34191439 ttagctcagttggttgggacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 40837954 - 40837896
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||| ||||||| |||| | |||||||||||| |||| |||||||| ||||    
T  40837954 ctcagttggtatggacaatatataaaatatgcaaggtccggggttcaaaccccgaccac 40837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 31602880 - 31602823
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    ||||||||||||||||  ||||| ||||||| ||||||||| |||| || ||||||||    
T  31602880 ttagctcagttggtatgaacaatgcataatatatgcaaggttcgagattcaaaccccg 31602823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 409 - 450
Target Start/End: Complemental strand, 41650990 - 41650949
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgag 450  Q
    |||||||||||| |||||| ||||||| ||||||||||||||    
T  41650990 ctcagttggtatggacaatgcataatatatgcaaggtccgag 41650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 4009872 - 4009936
Alignment:
Q  405 ttagctcagttggtattgacaatacat-aatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||| |||| |||||||| ||| |||| ||||||||||||||    
T  4009872 ttagctcagttggtaaggacaatgcattaatatatgcaagggccggggttcaaaccccggccacc 4009936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 18391606 - 18391654
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||| | |||||||||||||||||    
T  18391606 ttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggtt 18391654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 18789041 - 18789105
Alignment:
Q  404 attagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||||  |||||| ||||| | ||||||||| || |||| ||||||| ||||||    
T  18789041 attagctcagttggtagagacaatgcataaaatatgcaaggttcggggttcaaaccccagccacc 18789105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 24636703 - 24636639
Alignment:
Q  405 ttagctcagttggtattgacaatacataatac-atgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||| |||||| ||||| |  ||||||||||||||||| ||||||| ||||||    
T  24636703 ttagctcagttagtatggacaatgcataaaaatatgcaaggtccgaggttcaaaccccagccacc 24636639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 422 - 462
Target Start/End: Original strand, 39938781 - 39938821
Alignment:
Q  422 gacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||| ||||||||||||| ||| ||||||||    
T  39938781 gacaatacataatatatgcaaggtccgaagtttaaaccccg 39938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 42505878 - 42505918
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  42505878 ttagctcagttggtatggacaatgcataatatatgcaaggt 42505918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 8269423 - 8269360
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||||||||||| |||||||||||| |||| |||||||| |||||    
T  8269423 ttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgaccacc 8269360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 34521245 - 34521182
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| |||| ||||| ||||||||    
T  34521245 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 34521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 25532979 - 25533038
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggc 464  Q
    |||| ||||||||||| |||||| ||||||| |||||||||||| |||| ||||||||||    
T  25532979 ttagttcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggc 25533038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 34632175 - 34632238
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| ||||||  |||||| ||||||| ||||||||| ||| ||||||||||    
T  34632175 ttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatcccggccacc 34632238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 42045427 - 42045364
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||| |  ||| ||||||||||||||    
T  42045427 ttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccacc 42045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 45140061 - 45139998
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| |||||||||||   ||| ||||||||||||||    
T  45140061 ttagctcagttggtatggacaatgcataatatatgcaaggtccagagtttaaaccccggccacc 45139998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 52441566 - 52441503
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||  |||  |||||||||||||    
T  52441566 ttagctcagttggtatagacaatgcataatatatgcaaggtccggcgtttgaaccccggccacc 52441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 18166608 - 18166670
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||| |||||| ||||||| |||||| ||||| |||| |||||||| ||||    
T  18166608 ttagctcagttggtatagacaatgcataatatatgcaaagtccggggttcaaaccccgaccac 18166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 468
Target Start/End: Original strand, 39302952 - 39303014
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||||||  |||||||||||| | |||||||||| | |||| ||||||||||||||    
T  39302952 tagctcagttggtaaggacaatacataaaatatgcaaggtcggtggttcaaaccccggccacc 39303014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 13615666 - 13615610
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    ||||||||||||||  |||||| ||||||||||||||||||| |||||  |||||||    
T  13615666 tagctcagttggtaaggacaatgcataatacatgcaaggtccaaggttcgaaccccg 13615610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 19620582 - 19620630
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||    
T  19620582 ttagctcagttggtaaggacaatacataatatatgcaaggtccggggtt 19620630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 26803506 - 26803450
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    |||||||||||||||| |||||| ||||||| |||||| ||||| |||| |||||||    
T  26803506 ttagctcagttggtatggacaatgcataatatatgcaaagtccggggttcaaacccc 26803450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 33153946 - 33153878
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||| ||| ||| |||||||||||  |||||| ||||||| ||| ||||||||||||| ||||||||    
T  33153946 tccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccg 33153878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 3509996 - 3509953
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccg 448  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  3509996 ttagctcagttggtatggacaatgcataatatatgcaaggtccg 3509953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 6000194 - 6000135
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||   |||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  6000194 ctcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaaccccggacacc 6000135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 468
Target Start/End: Original strand, 8736449 - 8736504
Alignment:
Q  413 gttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  8736449 gttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 8736504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 9265887 - 9265828
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||||||  ||||||||||||||||| | | || ||||||||||||||    
T  9265887 ctcagttggtatggacaatgtataatacatgcaaggtctgggattcaaaccccggccacc 9265828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 17139572 - 17139509
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| || ||||||||| |||| |||||||| |||||    
T  17139572 ttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccacc 17139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 27172773 - 27172714
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||| ||||| |||||||| ||||||| ||| ||||| ||||||| ||||||    
T  27172773 ctcagttggtatggacaaaacataatatatgcaagctccaaggttcaaacccctgccacc 27172714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 41884860 - 41884797
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| || | |||||||||||||| || ||||||||| ||||  |||||||||||||    
T  41884860 ttagctcagttagtttggacaatacataatatatacaaggtccggggttcgaaccccggccacc 41884797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 42888581 - 42888644
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  |||||| ||||||    
T  42888581 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaacccccgccacc 42888644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 47528502 - 47528439
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  |||||| ||||||| | |||||||||||||||  |||||||| ||||    
T  47528502 ttagctcagttggtaaggacaatgcataatatacgcaaggtccgaggttcgaaccccggacacc 47528439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 41763210 - 41763148
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    |||||||||||||||  || ||| ||||| | |||||||||||| |||| |||||||||||||    
T  41763210 ttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaaccccggccac 41763148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 26755622 - 26755683
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||| ||| |||||| ||| ||| |||||||||||| |||| ||||| ||||||    
T  26755622 ttagctcagttgatatggacaatgcattatatatgcaaggtccggggttcaaacctcggcca 26755683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 40680490 - 40680547
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||| |||||||| |||||||| |||| | |||||||||||| |||| ||||||||    
T  40680490 ttagcttagttggtaatgacaatatataaaatatgcaaggtccggggttaaaaccccg 40680547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 43611430 - 43611487
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||||| |||||||||||||| ||| |||||  | |||| ||||||||    
T  43611430 ttagctcagttggtatggacaatacataatatatgtaaggtatggggttcaaaccccg 43611487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 49183179 - 49183220
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  49183179 ttagctcagttggtaaggacaatacataatatatgcaaggtc 49183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 3481566 - 3481630
Alignment:
Q  405 ttagctcagttggtattgacaa-tacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||  ||||| | ||||||| |||||||||| | |||| ||||||||||||||    
T  3481566 ttagctcagttggtagggacaaatgcataatatatgcaaggtctggggttcaaaccccggccacc 3481630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Original strand, 8253745 - 8253785
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  8253745 ttagctcagttggtatggacaatgcataatatatgcaaggt 8253785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 13094032 - 13094098
Alignment:
Q  405 ttagctcagttggtattgacaatac---ataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||| |||||||||||||| |   |||||| ||||||||| |||| || ||||||||||||||    
T  13094032 ttagctcacttggtattgacaatgcataataatatatgcaaggttcgagattcaaaccccggccacc 13094098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 17651428 - 17651372
Alignment:
Q  412 agttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||| ||| |||||||||||| | |||||||||| |||||| |||||| |||||||    
T  17651428 agttgatatggacaatacataaaatatgcaaggtctgaggttcaaaccctggccacc 17651372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Complemental strand, 24752703 - 24752639
Alignment:
Q  405 ttagctcagttggtattgacaatacataat-acatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| |||||| | |||||||||| | ||||  |||||||||||||    
T  24752703 ttagctcagttggtatggacaatgcataataatatgcaaggtctggggttcgaaccccggccacc 24752639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 25086478 - 25086530
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||| ||| |||||||||||||||| |||||| ||||| | ||||||||||    
T  25086478 tccttgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtc 25086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 28016245 - 28016189
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacccc 461  Q
    ||||||||||||| || |||||||||||| | ||||||| |||| |||| |||||||    
T  28016245 ttagctcagttgggatggacaatacataaaatatgcaagatccggggttcaaacccc 28016189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 28832235 - 28832163
Alignment:
Q  396 cttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||| ||| ||| ||||||||||||  ||||| ||||||| |||||||||| |||||| ||| |||| |||||    
T  28832235 cttgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccacc 28832163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 34142419 - 34142379
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggt 445  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  34142419 ttagctcagttggtatgcacaatacataatatatgcaaggt 34142379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 38448921 - 38448873
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||||| ||||||| |||||||||||| ||||    
T  38448921 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggggtt 38448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 39252192 - 39252148
Alignment:
Q  414 ttggtattgacaatacataatacatgcaaggtccgaggttgaaac 458  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||||    
T  39252192 ttggtatcgacaatacataatatatgcaaggtccggggttcaaac 39252148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 47961344 - 47961296
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    ||||||||||||| |  |||||| ||||||| |||||||||||||||||    
T  47961344 ttagctcagttggcagagacaatgcataatatatgcaaggtccgaggtt 47961296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 52494062 - 52494126
Alignment:
Q  405 ttagctcagttggtattgacaatacataatac-atgcaaggtccgaggttgaaaccccggccacc 468  Q
    ||||||||||| |||| |||||| ||||| |  ||||||||||||||||| ||||||| ||||||    
T  52494062 ttagctcagttagtatggacaatgcataaaaatatgcaaggtccgaggttcaaaccccagccacc 52494126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 468
Target Start/End: Original strand, 1534 - 1597
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||||| |||||| ||||| | |||||||||||| ||||  |||||| ||||||    
T  1534 ttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaacccccgccacc 1597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 40004 - 40058
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaacc 459  Q
    |||||||||||||||| |||||| ||||||| |||||||||  |||||| |||||    
T  40004 ttagctcagttggtatggacaatgcataatatatgcaaggttagaggttcaaacc 40058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 45422 - 45466
Alignment:
Q  409 ctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||| | |||||||||||||| |||||||||||| ||||    
T  45422 ctcagttggtttggacaatacataatatatgcaaggtccggggtt 45466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 161136 - 161210
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||| ||| ||| |||||||||||| |||||| ||||| | ||||||||| || |||| |||||||| |||||    
T  161136 tccttgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccacc 161210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 467
Target Start/End: Complemental strand, 3369 - 3308
Alignment:
Q  406 tagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccac 467  Q
    ||||||||||||||  ||||| |||||||| ||||||||| || |||| ||||| |||||||    
T  3369 tagctcagttggtaaggacaagacataatatatgcaaggttcggggttcaaacctcggccac 3308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 3147 - 3188
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtc 446  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  3147 ttagctcagttggtaaagacaatacataatatatgcaaggtc 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 31221 - 31172
Alignment:
Q  394 tccttgggagattagctcagttggtattgacaatacataatacatgcaag 443  Q
    |||||| ||| |||||||||||||||| |||||| ||||||| |||||||    
T  31221 tccttgcgagtttagctcagttggtatggacaatgcataatatatgcaag 31172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 58859 - 58916
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccg 462  Q
    |||||||||||||||| || ||| ||||||  || |||||||||||||| ||||||||    
T  58859 ttagctcagttggtatggataatgcataatgtatacaaggtccgaggtttaaaccccg 58916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 53832 - 53784
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggtt 453  Q
    |||||||||||||||  |||| | |||||||||||||||||||| ||||    
T  53832 ttagctcagttggtaaggacagtgcataatacatgcaaggtccggggtt 53784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 75333 - 75394
Alignment:
Q  407 agctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggccacc 468  Q
    |||||||||||||  |||||| ||||||| |||||||||||| ||||  || ||||||||||    
T  75333 agctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcccggccacc 75394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 239813 - 239874
Alignment:
Q  405 ttagctcagttggtattgacaatacataatacatgcaaggtccgaggttgaaaccccggcca 466  Q
    |||||||||||||||  |||||| ||||||| |||||| |||||  ||| ||||||||||||    
T  239813 ttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccccggcca 239874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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