View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9081_low_37 (Length: 251)
Name: NF9081_low_37
Description: NF9081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9081_low_37 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 28795918 - 28796158
Alignment:
| Q |
11 |
agcagagaggttggtaaaagacaaaggacaccctttaatgtttgaagccttaaaacaaataattgaagaaaacaacacctttttagaaagtagcatggtt |
110 |
Q |
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| T |
28795918 |
agcagggaggttggtaaaagacaaaggacaccctttaatgtttgaagccttaaaacaaataattgaagaaaacaacacctttttagaaagtagcatggtt |
28796017 |
T |
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| Q |
111 |
cttgtggctggagatggaccttgggcagcaagatatagagaacttgggtcaaatgtattggttttaggaccccttgaacaaggtgaacttgcttctttct |
210 |
Q |
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| T |
28796018 |
cttgtggctggagatggaccttgggcagcaagatatagagaacttgggtcaaatgtattggttttaggaccccttgaacaaggtgaacttgcttctttct |
28796117 |
T |
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| Q |
211 |
ataatgctattgacatatttgtaaaccctactctaagagca |
251 |
Q |
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| T |
28796118 |
ataatgctattgacatatttgtaaaccctactttaagagca |
28796158 |
T |
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