View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9081_low_38 (Length: 248)

Name: NF9081_low_38
Description: NF9081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9081_low_38
NF9081_low_38
[»] chr3 (55 HSPs)
chr3 (55-227)||(36445561-36445733)
chr3 (77-148)||(41028942-41029013)
chr3 (66-118)||(2128331-2128383)
chr3 (79-139)||(25964359-25964419)
chr3 (44-117)||(35127429-35127502)
chr3 (44-116)||(1395611-1395683)
chr3 (77-133)||(38462204-38462260)
chr3 (82-153)||(43116524-43116595)
chr3 (54-112)||(42808923-42808981)
chr3 (77-135)||(44374735-44374793)
chr3 (66-111)||(15304427-15304472)
chr3 (66-115)||(42809242-42809291)
chr3 (77-113)||(905061-905097)
chr3 (88-148)||(2070963-2071023)
chr3 (79-147)||(16790181-16790249)
chr3 (77-117)||(20192697-20192737)
chr3 (64-116)||(36189506-36189558)
chr3 (77-117)||(40122843-40122883)
chr3 (79-139)||(48528495-48528555)
chr3 (31-106)||(25447290-25447364)
chr3 (64-111)||(30956704-30956751)
chr3 (64-111)||(30972516-30972563)
chr3 (75-114)||(33883838-33883877)
chr3 (77-132)||(47584398-47584453)
chr3 (77-112)||(49587007-49587042)
chr3 (77-139)||(3182453-3182515)
chr3 (77-139)||(20349567-20349629)
chr3 (44-110)||(23952164-23952230)
chr3 (80-118)||(30669064-30669102)
chr3 (79-141)||(36200033-36200095)
chr3 (56-114)||(44061093-44061151)
chr3 (75-117)||(49465752-49465794)
chr3 (66-111)||(10101556-10101601)
chr3 (66-111)||(10212481-10212526)
chr3 (79-132)||(16790449-16790502)
chr3 (77-118)||(24605107-24605148)
chr3 (59-112)||(32095264-32095317)
chr3 (79-132)||(32703062-32703115)
chr3 (78-139)||(34759619-34759679)
chr3 (72-117)||(42039098-42039143)
chr3 (76-117)||(44014219-44014260)
chr3 (77-142)||(53457291-53457356)
chr3 (81-117)||(2304336-2304372)
chr3 (77-117)||(8007786-8007826)
chr3 (80-132)||(27792796-27792848)
chr3 (77-148)||(27888694-27888766)
chr3 (77-113)||(34318031-34318067)
chr3 (77-117)||(35394792-35394832)
chr3 (75-115)||(36887463-36887503)
chr3 (19-147)||(41724120-41724247)
chr3 (80-116)||(42084345-42084381)
chr3 (77-141)||(44284149-44284213)
chr3 (90-118)||(44488822-44488850)
chr3 (77-117)||(48364970-48365010)
chr3 (77-133)||(49772759-49772815)
[»] chr5 (57 HSPs)
chr5 (77-152)||(20982226-20982301)
chr5 (77-142)||(35135753-35135818)
chr5 (79-149)||(26516205-26516275)
chr5 (64-116)||(4014502-4014554)
chr5 (54-117)||(465893-465956)
chr5 (56-112)||(3566388-3566444)
chr5 (77-117)||(7096218-7096258)
chr5 (77-117)||(12407752-12407792)
chr5 (66-133)||(6738487-6738554)
chr5 (46-117)||(34736587-34736657)
chr5 (77-148)||(37063165-37063236)
chr5 (79-117)||(13224368-13224406)
chr5 (75-117)||(24030001-24030043)
chr5 (88-149)||(4991045-4991106)
chr5 (80-117)||(12460094-12460131)
chr5 (76-117)||(33459025-33459066)
chr5 (82-147)||(37968800-37968865)
chr5 (66-110)||(10363696-10363740)
chr5 (77-117)||(11054125-11054165)
chr5 (77-117)||(34690813-34690853)
chr5 (77-117)||(39128578-39128618)
chr5 (82-117)||(1773521-1773556)
chr5 (77-132)||(35960338-35960393)
chr5 (54-117)||(37112326-37112389)
chr5 (31-149)||(39105370-39105488)
chr5 (66-117)||(40048360-40048411)
chr5 (77-139)||(912740-912802)
chr5 (75-117)||(6593239-6593281)
chr5 (3-117)||(7674587-7674700)
chr5 (79-129)||(9860891-9860941)
chr5 (90-152)||(14714943-14715005)
chr5 (88-130)||(18704137-18704179)
chr5 (77-139)||(35095874-35095936)
chr5 (88-138)||(38033886-38033936)
chr5 (66-116)||(42583089-42583139)
chr5 (79-112)||(5563648-5563681)
chr5 (75-112)||(7853602-7853639)
chr5 (80-133)||(10391276-10391329)
chr5 (77-149)||(11457030-11457100)
chr5 (81-138)||(11684341-11684398)
chr5 (66-134)||(11835198-11835267)
chr5 (44-117)||(12425510-12425583)
chr5 (90-151)||(19093950-19094011)
chr5 (77-118)||(21782660-21782701)
chr5 (77-114)||(28578834-28578871)
chr5 (80-117)||(29588819-29588856)
chr5 (88-117)||(42573881-42573910)
chr5 (81-132)||(3237023-3237075)
chr5 (66-149)||(9202828-9202912)
chr5 (77-117)||(28586857-28586897)
chr5 (77-117)||(29115304-29115344)
chr5 (77-117)||(29117021-29117061)
chr5 (77-113)||(29590831-29590867)
chr5 (77-117)||(34975317-34975357)
chr5 (77-117)||(38047946-38047986)
chr5 (83-147)||(38819672-38819736)
chr5 (96-148)||(40534102-40534154)
[»] chr4 (43 HSPs)
chr4 (16-117)||(30338622-30338723)
chr4 (79-148)||(7749175-7749244)
chr4 (56-117)||(6364088-6364149)
chr4 (58-115)||(17884009-17884066)
chr4 (77-118)||(51044550-51044591)
chr4 (64-116)||(3155543-3155595)
chr4 (90-130)||(54986348-54986388)
chr4 (90-141)||(2980575-2980626)
chr4 (75-149)||(42641722-42641797)
chr4 (77-152)||(49219043-49219118)
chr4 (79-149)||(24443945-24444015)
chr4 (79-141)||(46796933-46796995)
chr4 (83-132)||(4191663-4191712)
chr4 (71-132)||(51555952-51556013)
chr4 (44-113)||(56480291-56480360)
chr4 (77-117)||(4798650-4798690)
chr4 (77-117)||(25487636-25487676)
chr4 (77-117)||(47970257-47970297)
chr4 (82-118)||(52645845-52645881)
chr4 (77-152)||(8703713-8703788)
chr4 (75-118)||(21683568-21683611)
chr4 (56-115)||(21953214-21953273)
chr4 (66-117)||(24160929-24160980)
chr4 (77-132)||(30024624-30024679)
chr4 (54-105)||(47800581-47800632)
chr4 (77-139)||(19422335-19422397)
chr4 (64-117)||(7601698-7601751)
chr4 (95-140)||(9843775-9843820)
chr4 (79-132)||(11262846-11262899)
chr4 (77-118)||(20907111-20907152)
chr4 (64-117)||(23503498-23503551)
chr4 (56-113)||(34368820-34368876)
chr4 (77-118)||(35958593-35958634)
chr4 (88-133)||(41050619-41050664)
chr4 (77-134)||(44019445-44019502)
chr4 (78-127)||(46019718-46019767)
chr4 (77-134)||(54277405-54277462)
chr4 (77-117)||(8422928-8422968)
chr4 (77-117)||(9680603-9680643)
chr4 (77-117)||(21593102-21593142)
chr4 (77-133)||(24929416-24929472)
chr4 (80-152)||(24936215-24936286)
chr4 (78-134)||(35743226-35743282)
[»] chr8 (38 HSPs)
chr8 (77-148)||(14482110-14482181)
chr8 (77-147)||(39392752-39392822)
chr8 (47-149)||(7646112-7646215)
chr8 (75-117)||(26215435-26215477)
chr8 (77-138)||(42597319-42597380)
chr8 (66-118)||(4558736-4558788)
chr8 (77-140)||(40357815-40357878)
chr8 (79-149)||(35869744-35869814)
chr8 (56-117)||(1112792-1112853)
chr8 (75-120)||(32976353-32976398)
chr8 (56-117)||(37444485-37444546)
chr8 (77-134)||(40728509-40728566)
chr8 (91-147)||(28769444-28769500)
chr8 (81-132)||(14949812-14949863)
chr8 (45-116)||(18930642-18930713)
chr8 (77-152)||(29699158-29699233)
chr8 (77-115)||(1470947-1470985)
chr8 (77-139)||(6918270-6918332)
chr8 (90-152)||(8536152-8536214)
chr8 (90-140)||(8629025-8629075)
chr8 (80-149)||(10114396-10114466)
chr8 (78-132)||(35298570-35298624)
chr8 (3-117)||(37353267-37353379)
chr8 (92-130)||(43208239-43208277)
chr8 (90-147)||(3645920-3645977)
chr8 (76-117)||(9956902-9956943)
chr8 (76-133)||(11056757-11056814)
chr8 (76-117)||(16163368-16163409)
chr8 (88-121)||(33697054-33697087)
chr8 (75-152)||(35453712-35453789)
chr8 (56-117)||(40598924-40598984)
chr8 (93-149)||(4389850-4389906)
chr8 (79-147)||(10727106-10727174)
chr8 (78-118)||(10939345-10939385)
chr8 (56-112)||(11000631-11000687)
chr8 (77-117)||(11119090-11119130)
chr8 (77-113)||(26820142-26820178)
chr8 (77-117)||(31915360-31915400)
[»] chr1 (56 HSPs)
chr1 (79-142)||(23895250-23895313)
chr1 (56-141)||(4256112-4256198)
chr1 (56-114)||(38578469-38578527)
chr1 (56-117)||(34619448-34619509)
chr1 (57-117)||(4445647-4445707)
chr1 (75-139)||(33339509-33339573)
chr1 (76-148)||(44236621-44236693)
chr1 (51-115)||(46252747-46252811)
chr1 (77-117)||(50319231-50319271)
chr1 (54-117)||(7028231-7028294)
chr1 (77-140)||(16982027-16982090)
chr1 (75-117)||(172666-172708)
chr1 (75-117)||(4549805-4549847)
chr1 (75-117)||(4700155-4700197)
chr1 (3-117)||(7472251-7472363)
chr1 (44-118)||(36151563-36151637)
chr1 (3-116)||(34952155-34952267)
chr1 (78-142)||(25707075-25707138)
chr1 (66-118)||(37593749-37593801)
chr1 (44-132)||(44032057-44032145)
chr1 (74-117)||(2194446-2194489)
chr1 (77-152)||(4200133-4200208)
chr1 (56-115)||(9572178-9572237)
chr1 (88-139)||(13037781-13037832)
chr1 (75-118)||(30815724-30815767)
chr1 (56-115)||(37841939-37841998)
chr1 (75-114)||(49557083-49557122)
chr1 (79-117)||(172280-172318)
chr1 (77-139)||(870962-871024)
chr1 (75-117)||(2462906-2462948)
chr1 (75-117)||(3887721-3887763)
chr1 (75-117)||(6976887-6976929)
chr1 (77-139)||(23373381-23373443)
chr1 (77-139)||(40357977-40358039)
chr1 (77-115)||(45999379-45999417)
chr1 (76-117)||(4768914-4768955)
chr1 (77-142)||(7274030-7274095)
chr1 (66-115)||(8852801-8852850)
chr1 (77-118)||(15360832-15360873)
chr1 (56-109)||(15687143-15687196)
chr1 (43-108)||(28837407-28837472)
chr1 (75-116)||(37842444-37842485)
chr1 (45-142)||(43372018-43372115)
chr1 (76-117)||(43722405-43722446)
chr1 (77-152)||(48282036-48282113)
chr1 (77-114)||(49517012-49517049)
chr1 (44-116)||(1432455-1432527)
chr1 (75-115)||(9507089-9507129)
chr1 (77-117)||(17269189-17269229)
chr1 (54-118)||(27140423-27140487)
chr1 (81-117)||(31294616-31294652)
chr1 (77-117)||(36641814-36641854)
chr1 (77-117)||(38651500-38651540)
chr1 (79-139)||(40304147-40304207)
chr1 (77-117)||(43420020-43420060)
chr1 (77-117)||(46499945-46499985)
[»] chr7 (52 HSPs)
chr7 (56-134)||(49060462-49060540)
chr7 (77-149)||(31341101-31341173)
chr7 (95-142)||(27389297-27389344)
chr7 (77-139)||(5373142-5373204)
chr7 (77-150)||(30133957-30134028)
chr7 (65-114)||(43152981-43153030)
chr7 (91-151)||(27481399-27481459)
chr7 (77-148)||(1431399-1431470)
chr7 (58-117)||(28613606-28613665)
chr7 (75-134)||(44241782-44241841)
chr7 (77-152)||(47003991-47004066)
chr7 (77-115)||(28178910-28178948)
chr7 (44-150)||(39169473-39169579)
chr7 (59-117)||(40009409-40009467)
chr7 (88-133)||(2223071-2223116)
chr7 (81-134)||(10079435-10079488)
chr7 (83-120)||(28702696-28702733)
chr7 (80-117)||(33894562-33894599)
chr7 (81-118)||(35808999-35809036)
chr7 (97-142)||(36598432-36598477)
chr7 (88-133)||(39551650-39551695)
chr7 (56-117)||(42656454-42656515)
chr7 (78-142)||(24975818-24975882)
chr7 (90-142)||(27517955-27518006)
chr7 (77-117)||(35536046-35536086)
chr7 (91-139)||(42281604-42281652)
chr7 (79-122)||(1432060-1432103)
chr7 (76-115)||(2894758-2894797)
chr7 (77-152)||(3241345-3241420)
chr7 (80-127)||(4591471-4591518)
chr7 (77-116)||(5006600-5006639)
chr7 (77-132)||(7244626-7244681)
chr7 (79-130)||(24973870-24973921)
chr7 (79-118)||(35007542-35007581)
chr7 (75-118)||(43250768-43250811)
chr7 (66-116)||(6824858-6824908)
chr7 (78-152)||(8445190-8445264)
chr7 (78-132)||(22759110-22759164)
chr7 (89-131)||(27492720-27492762)
chr7 (77-131)||(30496629-30496683)
chr7 (77-131)||(46213728-46213782)
chr7 (77-118)||(1417202-1417243)
chr7 (77-118)||(27626215-27626256)
chr7 (44-105)||(34083583-34083644)
chr7 (77-118)||(46223163-46223204)
chr7 (77-117)||(5276163-5276203)
chr7 (85-117)||(25670684-25670716)
chr7 (66-114)||(37832219-37832267)
chr7 (79-139)||(39539854-39539914)
chr7 (77-109)||(44910551-44910583)
chr7 (77-117)||(45593810-45593850)
chr7 (77-117)||(45813271-45813311)
[»] chr6 (47 HSPs)
chr6 (56-117)||(507159-507220)
chr6 (77-148)||(2514610-2514681)
chr6 (79-149)||(7354111-7354181)
chr6 (44-117)||(9093614-9093687)
chr6 (79-148)||(10452453-10452522)
chr6 (44-117)||(29274287-29274360)
chr6 (44-108)||(769087-769151)
chr6 (4-152)||(2206494-2206641)
chr6 (44-112)||(2735013-2735081)
chr6 (65-133)||(8349743-8349811)
chr6 (3-117)||(4006653-4006766)
chr6 (77-127)||(24836290-24836340)
chr6 (77-147)||(32975887-32975957)
chr6 (75-141)||(33911370-33911436)
chr6 (77-142)||(4248872-4248937)
chr6 (77-118)||(4420555-4420596)
chr6 (44-117)||(20671923-20671996)
chr6 (77-142)||(22742280-22742345)
chr6 (77-122)||(33067093-33067138)
chr6 (80-152)||(33068655-33068727)
chr6 (75-149)||(264277-264352)
chr6 (75-110)||(1402942-1402977)
chr6 (92-143)||(10032484-10032535)
chr6 (66-141)||(10749308-10749382)
chr6 (79-118)||(33500574-33500613)
chr6 (77-115)||(781326-781364)
chr6 (83-117)||(4247731-4247765)
chr6 (77-139)||(8470079-8470141)
chr6 (74-116)||(20370839-20370881)
chr6 (83-117)||(31461617-31461651)
chr6 (80-114)||(31624200-31624234)
chr6 (90-132)||(31668789-31668831)
chr6 (64-117)||(430454-430507)
chr6 (88-137)||(2727958-2728007)
chr6 (82-131)||(5554861-5554910)
chr6 (81-122)||(12631546-12631587)
chr6 (90-135)||(29249395-29249440)
chr6 (77-118)||(34544541-34544582)
chr6 (79-131)||(1810393-1810445)
chr6 (90-130)||(6647315-6647355)
chr6 (66-110)||(18129804-18129848)
chr6 (77-113)||(21959671-21959707)
chr6 (80-132)||(27889937-27889989)
chr6 (77-113)||(29940739-29940775)
chr6 (77-113)||(30865425-30865461)
chr6 (81-117)||(33416324-33416360)
chr6 (77-133)||(34405028-34405084)
[»] scaffold0590 (1 HSPs)
scaffold0590 (77-131)||(1165-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (77-131)||(2756-2810)
[»] chr2 (56 HSPs)
chr2 (79-135)||(9478220-9478276)
chr2 (77-129)||(13864577-13864629)
chr2 (56-148)||(35459818-35459910)
chr2 (78-117)||(5133711-5133750)
chr2 (77-152)||(28803597-28803672)
chr2 (75-149)||(39567809-39567884)
chr2 (59-117)||(4026756-4026814)
chr2 (77-131)||(31461363-31461417)
chr2 (77-135)||(37033965-37034023)
chr2 (78-140)||(44606180-44606242)
chr2 (77-118)||(5045248-5045289)
chr2 (77-130)||(9875548-9875601)
chr2 (77-134)||(33197330-33197387)
chr2 (40-117)||(36114577-36114654)
chr2 (77-118)||(38239642-38239683)
chr2 (80-148)||(9886215-9886283)
chr2 (77-117)||(17952792-17952832)
chr2 (77-117)||(25609735-25609775)
chr2 (77-117)||(32098399-32098439)
chr2 (79-139)||(32694130-32694189)
chr2 (77-140)||(3423859-3423922)
chr2 (75-118)||(5998791-5998834)
chr2 (78-117)||(34054993-34055032)
chr2 (77-132)||(40672887-40672942)
chr2 (77-152)||(41240968-41241043)
chr2 (31-117)||(8017374-8017458)
chr2 (75-133)||(10150678-10150736)
chr2 (77-151)||(10198569-10198643)
chr2 (75-117)||(18962127-18962169)
chr2 (76-114)||(26143731-26143769)
chr2 (77-115)||(40837519-40837557)
chr2 (83-117)||(41033047-41033081)
chr2 (64-118)||(42457886-42457940)
chr2 (66-112)||(42907303-42907349)
chr2 (64-117)||(3611165-3611218)
chr2 (66-139)||(3673724-3673797)
chr2 (76-117)||(8820363-8820404)
chr2 (79-148)||(11393459-11393528)
chr2 (79-148)||(11410120-11410189)
chr2 (79-132)||(14209201-14209254)
chr2 (79-140)||(15779995-15780056)
chr2 (89-118)||(29430694-29430723)
chr2 (76-117)||(30990459-30990500)
chr2 (77-118)||(35755593-35755634)
chr2 (80-117)||(41809337-41809374)
chr2 (65-118)||(43141496-43141549)
chr2 (77-134)||(43431535-43431592)
chr2 (43-112)||(44439417-44439486)
chr2 (52-112)||(656843-656903)
chr2 (3-111)||(787276-787384)
chr2 (77-133)||(5867282-5867338)
chr2 (77-149)||(5942832-5942904)
chr2 (66-114)||(7825194-7825242)
chr2 (77-117)||(10143111-10143151)
chr2 (45-117)||(15119928-15120000)
chr2 (64-112)||(40758967-40759015)
[»] scaffold0024 (2 HSPs)
scaffold0024 (77-149)||(27483-27555)
scaffold0024 (54-117)||(21346-21409)
[»] scaffold0459 (1 HSPs)
scaffold0459 (88-117)||(8276-8305)
[»] scaffold0366 (1 HSPs)
scaffold0366 (88-117)||(8200-8229)
[»] scaffold0508 (1 HSPs)
scaffold0508 (77-149)||(9866-9938)
[»] scaffold0019 (1 HSPs)
scaffold0019 (65-117)||(104213-104265)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 36445733 - 36445561
Alignment:
Q  55 cagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcactac 154  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36445733 cagcttaagcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcactac 36445634  T
Q  155 ctaatcttcacagtattggcaattcactgtaaaagtacctgaaaatgatcaatttcagcagcctgagacaaca 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36445633 ctaatcttcacagtattggcaattcactgtaaaagtacctgaaaatgatcaatttcagcagcctgagacaaca 36445561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 41028942 - 41029013
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||| ||| || |||||    
T  41028942 actttattttttcttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataag 41029013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 2128331 - 2128383
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaa 2128383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 25964419 - 25964359
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||    
T  25964419 tttattttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactta 25964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 35127429 - 35127502
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| |||||| ||| |||||||||| ||| |||||||| | | |||||||||||||||||||| |||||||||    
T  35127429 aaaatagtttatagcatatgcaaaaacaatttaactttagtatatcttttgttatagaaatagcctatacataa 35127502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 1395683 - 1395611
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    ||||||||| | |||||||   |||| ||| | |||||||||| |||||||||||||||||||||||||||||    
T  1395683 aaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 38462260 - 38462204
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||| ||||||| ||||||||||||||||| ||||| ||| ||||||||||    
T  38462260 actttattttatcttttggtatagaaatagcttataaataaacacttatatgataag 38462204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 43116524 - 43116595
Alignment:
Q  82 attttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcacta 153  Q
    ||||| ||||||||||||||||||||||| ||||||| |||  |||||||| || |||||| |||| |||||    
T  43116524 attttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataaacacta 43116595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 42808981 - 42808923
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    |||||||||  ||||| ||| |||||||||||| |||||||||||||||| ||||||||    
T  42808981 acagcttatataaaaacaatttaactttattttatcttttgttatagaaacagcttata 42808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 44374735 - 44374793
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagca 135  Q
    |||||||||| |||||||||| ||| |||||||||||||||  ||| ||||||||||||    
T  44374735 actttattttatcttttgttaaagatatagcttatacataagcacttatatgataagca 44374793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 15304427 - 15304472
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttat 111  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||    
T  15304427 aaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 42809291 - 42809242
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||| ||| ||||| |||||| ||||||||||||||||||||||||||||    
T  42809291 aaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 905061 - 905097
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| ||||||||||||||||||||||||||    
T  905061 actttattttatcttttgttatagaaatagcttatac 905097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 2071023 - 2070963
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| ||||||||||||||||| || ||| || ||||||| |||||||| |||||    
T  2071023 tcttttgttaaagaaatagcttatacattaacacttatgtgataagtacttatgctataag 2070963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||||||| |||||||||||||||||| |||||| ||||  ||| ||||||||| | ||||||| ||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 20192697 - 20192737
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  20192697 actttattttatcttttgttatataaatagcttatacataa 20192737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 36189558 - 36189506
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||| ||| |||||||||||| |||||||| | ||||||||||||||||||    
T  36189558 caaaaacaatttaactttattttatcttttgtaagagaaatagcttatacata 36189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 40122843 - 40122883
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  40122843 actttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 48528555 - 48528495
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||| | | ||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  48528555 tttattttatttcttgttatagaaatagcttatacataagtacttatatgataagctctta 48528495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 25447290 - 25447364
Alignment:
Q  31 agatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatag 106  Q
    |||||||| ||||||| ||||||| ||||||| |||||| ||| ||| |||||||| ||||||  |||||||||||    
T  25447290 agatagcttatgaaaa-cagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaatag 25447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 30956704 - 30956751
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttat 111  Q
    |||||| ||| |||||||||||| ||||||| ||||||||||||||||    
T  30956704 caaaaacaatttaactttattttatcttttgctatagaaatagcttat 30956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 30972516 - 30972563
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttat 111  Q
    |||||| ||| |||||||||||| ||||||| ||||||||||||||||    
T  30972516 caaaaacaatttaactttattttatcttttgctatagaaatagcttat 30972563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 33883838 - 33883877
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttataca 114  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  33883838 taactttattttatcttatgttatagaaatagcttataca 33883877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 47584453 - 47584398
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||||||  ||||||| |||||||||||||| |||||||| || |||||||||    
T  47584453 actttattttaccttttgtcatagaaatagcttacacataaaaccttatatgataa 47584398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 49587007 - 49587042
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttata 112  Q
    |||||||||| |||||||||||||||||||||||||    
T  49587007 actttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 3182453 - 3182515
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| ||||||  ||||||| || |||||||||||| ||| | ||||||||||||||    
T  3182453 actttattttatctttttctatagaagtaacttatacataaacacttaaatgataagcactta 3182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 20349567 - 20349629
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||| ||||| || |||||||  ||||||||||||||| ||| ||| ||||||||||||||||    
T  20349567 acttcattttatcctttgttactgaaatagcttatacacaaacacttatatgataagcactta 20349629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 23952164 - 23952230
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagctta 110  Q
    ||||||| ||||||||||| |||||| | | | |||| ||||| |||||||||||||||||| ||||    
T  23952164 aaaacagcttacagcttatacaaaaatactttgacttaattttatcttttgttatagaaataactta 23952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 30669064 - 30669102
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  30669064 ttattttatcttttgttataaaaatagcttatacataaa 30669102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 36200095 - 36200033
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    |||||||| || ||||||| | |||||||| |||||||| |||| ||||||||||| ||||||    
T  36200095 tttattttatcatttgttacataaatagctgatacataagaacttatatgataagctcttatg 36200033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 44061093 - 44061151
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttataca 114  Q
    |||||||  ||||| ||| |||| ||||||| ||||||| |||||||||||||||||||    
T  44061093 agcttatagaaaaacaatttaaccttattttatcttttgctatagaaatagcttataca 44061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 49465752 - 49465794
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| |||||||||||| |||||||||| ||||||    
T  49465752 taactttattttatcttttgttataaaaatagcttacacataa 49465794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 10101556 - 10101601
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttat 111  Q
    |||| ||| |||||||||||| |||||||||||||||||| |||||    
T  10101556 aaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 10212481 - 10212526
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttat 111  Q
    |||| ||| |||||||||||| |||||||||||||||||| |||||    
T  10212481 aaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 16790449 - 16790502
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||| ||| |||||||| |||||||||||||||||  ||| |||||||||    
T  16790449 tttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 24605107 - 24605148
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||  |||||||||||||||||| ||||||||||||    
T  24605107 actttatttcatcttttgttatagaaataacttatacataaa 24605148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 32095264 - 32095317
Alignment:
Q  59 ttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    |||| |||||| ||| |||||| ||||| |||||||||||||||||| ||||||    
T  32095264 ttatacaaaaacaatttaacttaattttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 32703115 - 32703062
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||| |||||| | |||||||||||||||||||||| | | |||||||||    
T  32703115 tttattttatcttttataatagaaatagcttatacataaacatttatatgataa 32703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 34759619 - 34759679
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    ||||||||| | ||||| |||||||||||||||||||| || ||| ||||||||||| ||||    
T  34759619 ctttattttattttttgatatagaaatagcttatacat-aagacttatatgataagcgctta 34759679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 42039143 - 42039098
Alignment:
Q  72 atctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| |||||||||| | |||||||| |||||||||||||||||||    
T  42039143 atctgactttattttattttttgttacagaaatagcttatacataa 42039098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 44014260 - 44014219
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  44014260 aactttgttttatctttagttatagaaatagcttatacataa 44014219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 53457356 - 53457291
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||| ||||||||||| ||| |||||||||| |||| ||| | ||||||| || ||||||    
T  53457356 actttattttatcttttgttatcgaagtagcttatacgtaaacacttaaatgataatcagttatgc 53457291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 2304336 - 2304372
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| |||||| |||||||||||||||||||||||    
T  2304336 tattttatcttttattatagaaatagcttatacataa 2304372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 8007786 - 8007826
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| |||||||||||||||| |||||||||||||    
T  8007786 actttactttatcttttgttatagaaacagcttatacataa 8007826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 27792848 - 27792796
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||| ||||||||| | ||||||||||||||||||  ||| |||||||||    
T  27792848 ttattttatcttttgtttttgaaatagcttatacataagcacttatatgataa 27792796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 27888694 - 27888766
Alignment:
Q  77 actttattttctcttttgttatagaaatagctta-tacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| |||||||||||| ||||||| || |||||||| | | ||||||||| | ||||||| |||||    
T  27888694 actttattttatcttttgttatacaaatagcctattacataaataattatatgataaacgcttatgctataag 27888766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 34318067 - 34318031
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| | ||||||||||||||||||||||||    
T  34318067 actttattttatattttgttatagaaatagcttatac 34318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 35394792 - 35394832
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  35394792 actttattttatcttttattatagaaatagattatacataa 35394832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 36887503 - 36887463
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  36887503 taacttaattttatcttttgttatagaaataacttatacat 36887463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 41724247 - 41724120
Alignment:
Q  19 ataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| ||||||  ||||||| ||||||| ||||||| |||||||  ||||  ||| ||| ||||  || ||| || ||||||||||||||| |||||||     
T  41724247 ataagctctcaaggatagctgatgaaaa-cagtttatagcttatataaaaccaatttaaatttaaattatctattcttatagaaatagcttgtacataag 41724149  T
Q  119 aactcatatgataagcacttatgcaataa 147  Q
     ||| |||| || ||||||||||| ||||    
T  41724148 cacttatataatgagcacttatgctataa 41724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 42084345 - 42084381
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacata 116  Q
    ||||||| || ||||||||||||||||||||||||||    
T  42084345 ttattttatcctttgttatagaaatagcttatacata 42084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 44284149 - 44284213
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    ||||| |||| | |||||||||||||||||||||||||| |  ||| ||||||||| | ||||||    
T  44284149 actttgttttattttttgttatagaaatagcttatacattagtacttatatgataatcgcttatg 44284213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Complemental strand, 44488850 - 44488822
Alignment:
Q  90 ttttgttatagaaatagcttatacataaa 118  Q
    |||||||||||||||||||||||||||||    
T  44488850 ttttgttatagaaatagcttatacataaa 44488822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 48364970 - 48365010
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||| |||||| |||||||||||    
T  48364970 actttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 49772759 - 49772815
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||| | |||| ||| | |||||||||||||||||| ||| ||||||||||    
T  49772759 actttattttattttttattacaaaaatagcttatacataaacacttatatgataag 49772815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 20982226 - 20982301
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| || |||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||    
T  20982226 actttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcact 20982301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 35135753 - 35135818
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  35135753 actttattttatcttttgttatagaaatatcttatacataaacacttatatgttaagcacttatgc 35135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 26516275 - 26516205
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||| ||||||||| ||||||||||||||||||||  ||| ||||||||||| ||||||| ||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagc 26516205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 4014502 - 4014554
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  4014502 caaaaacaatctaactttattttatcttttgctatagaaatagcttatacata 4014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 465956 - 465893
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| |||||| ||| |||||||||||| |||||||| |||||||||||||||| ||||    
T  465956 acagcttatacaaaaacaatttaactttattttatcttttgtcatagaaatagcttatatataa 465893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 3566388 - 3566444
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    ||||||| |||||| ||| |||||||||||||||||| | |||||||||||||||||    
T  3566388 agcttatacaaaaataatttaactttattttctctttgggtatagaaatagcttata 3566444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 7096218 - 7096258
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  7096218 actttattttatcttttgttatagaaatagcttatacataa 7096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 12407752 - 12407792
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 6738487 - 6738554
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||| | |||||||||| |||||| |||| ||||||||||||||||||  ||| ||||||||||    
T  6738487 aaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataag 6738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 34736587 - 34736657
Alignment:
Q  46 aacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| ||||||| |||||| ||| || |||||||| |||||||| |||||||||||||||| |||||    
T  34736587 aacagtttatagcttatacaaaaataatttagctttattt-ctcttttgctatagaaatagcttatgcataa 34736657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 37063165 - 37063236
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| ||||||||||||||||||| ||||||||||  | | |||||| ||||| |||||| |||||    
T  37063165 actttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataag 37063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 13224406 - 13224368
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataa 13224368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 24030043 - 24030001
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  24030043 taactttatattctcttttgctatagaaatagcttatacataa 24030001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 4991045 - 4991106
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||||||| |||||||||||||| ||| ||| ||||||||| | ||||||| ||||||    
T  4991045 tcttttgttataaaaatagcttatacacaaacacttatatgataatcgcttatgctataagc 4991106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 12460094 - 12460131
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  12460094 ttattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 33459025 - 33459066
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  33459025 aactttattttgtcttttgttatagaaataacttatacataa 33459066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 37968865 - 37968800
Alignment:
Q  82 attttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    ||||| |||||||||||||||||||||||||| |||   |||||||||| || |||||||| ||||    
T  37968865 attttatcttttgttatagaaatagcttatacctaagccctcatatgattagaacttatgctataa 37968800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 10363740 - 10363696
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagctta 110  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||    
T  10363740 aaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 11054165 - 11054125
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  11054165 actttattttatcttttattatagaaatagcttatacataa 11054125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 34690853 - 34690813
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  34690853 actttattttatcttttgttatagaaatagcgtatacataa 34690813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 39128618 - 39128578
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  39128618 actttattttatcttttgttatagaattagcttatacataa 39128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 117
Target Start/End: Original strand, 1773521 - 1773556
Alignment:
Q  82 attttctcttttgttatagaaatagcttatacataa 117  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1773521 attttatcttttgttatagaaatagcttatacataa 1773556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 35960393 - 35960338
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||||| |||||| |||||||||||| |||| |||||| ||| |||||||||    
T  35960393 actttattttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 37112326 - 37112389
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| |||| |||||| ||| ||||||| |||| ||||||| | ||||||||||||||||||||    
T  37112326 acaggttatacaaaaacaatttaactttgttttatcttttgctgtagaaatagcttatacataa 37112389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 39105488 - 39105370
Alignment:
Q  31 agatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcat-atga 129  Q
    |||||||| ||||||| ||| ||| ||||||| | |||| ||| |||||| ||||  | ||| | ||||||||||||||||||||||   || || ||||    
T  39105488 agatagcttatgaaaa-cagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatacataagcgcttatcatga 39105390  T
Q  130 taagcacttatgcaataagc 149  Q
    ||||||||||||| ||||||    
T  39105389 taagcacttatgctataagc 39105370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 40048360 - 40048411
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||| |||||||||||| |||||||||||||||| | |||||||||||    
T  40048360 aaaataatataactttattttatcttttgttatagaaacaacttatacataa 40048411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 912740 - 912802
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| | || ||||||||||||| ||||| ||||||  || ||||||||||||||||    
T  912740 actttattttatattgtgttatagaaataacttattcataaacgcttatatgataagcactta 912802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 6593281 - 6593239
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| ||||||||||||||||| | ||||||||||    
T  6593281 taactttattttatcttttgttatagaaattgtttatacataa 6593239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7674700 - 7674587
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    |||||||||||  |||| ||| ||||  |||||||| ||||||| || ||||  ||||||   |||| ||| ||| |||||||| ||||||| |||||||    
T  7674700 ttttcagcttattttcacaaattctccaagatagcttatgaaaa-cattttatggcttataagaaaacaatttaaatttattttatcttttggtatagaa 7674602  T
Q  103 atagcttatacataa 117  Q
    |||||||||| ||||    
T  7674601 atagcttatatataa 7674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 9860891 - 9860941
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatga 129  Q
    |||||||| || |||||| |||||||||||||||||||| |||| ||||||    
T  9860891 tttattttgtcatttgttctagaaatagcttatacataataacttatatga 9860941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 14714943 - 14715005
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||||||||||||||||||||||||||  ||| ||| || ||||  |||||| |||||||||    
T  14714943 ttttgttatagaaatagcttatacataatcacttatacgagaagcgtttatgccataagcact 14715005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 18704137 - 18704179
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    |||||||||||||||||| ||||||||||| |||| |||||||    
T  18704137 tcttttgttatagaaataacttatacataagaacttatatgat 18704179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 35095874 - 35095936
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| ||||||||||||||||||| ||| | ||||  ||| ||||||||||| ||||    
T  35095874 actttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcgctta 35095936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 38033936 - 38033886
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataagcactt 138  Q
    |||||||||||| ||||| |||||||||||| ||| || ||||||||||||    
T  38033936 tcttttgttatataaataacttatacataaacacttatttgataagcactt 38033886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 42583139 - 42583089
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||| ||| |||||||||||  |||||||||||||||||| ||||||||||    
T  42583139 aaaacaatttaactttatttcatcttttgttatagaaataccttatacata 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 5563681 - 5563648
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttata 112  Q
    |||||||| |||||||||||||||||||||||||    
T  5563681 tttattttatcttttgttatagaaatagcttata 5563648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 7853639 - 7853602
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttata 112  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  7853639 taactttattttatcttttgttatagaaatagtttata 7853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 10391329 - 10391276
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    ||||||| |||||||||||| ||||||||||||| |||  ||| ||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 11457100 - 11457030
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||| | ||||| ||||||||||  ||||||||||||| | |  |||||||||||||||||| ||||||    
T  11457100 actttattatatctttcgttatagaaa--gcttatacataaacatttgtatgataagcacttatgctataagc 11457030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 11684398 - 11684341
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactt 138  Q
    |||||| | |||||||||| ||||||||||||||| |  ||| |||||||||||||||    
T  11684398 tattttatattttgttataaaaatagcttatacattagcacttatatgataagcactt 11684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 11835267 - 11835198
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagc 134  Q
    |||| ||| |||||||||||| |||||||||||| |||| | ||||||||||| ||| || |||||||||    
T  11835267 aaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttatcatgataagc 11835198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 12425583 - 12425510
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||| ||||||| | |||| ||| |||||||||||| ||||||  |||| |||||| ||||||||||    
T  12425583 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaatagtttatacataa 12425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 19093950 - 19094011
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcac 151  Q
    |||| |||||||||||||||| | |||||  || ||||||||||| ||||||| ||||||||    
T  19093950 ttttattatagaaatagcttacatataaatgcttatatgataagcgcttatgctataagcac 19094011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 21782660 - 21782701
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||||||  |||||||||||||||||||||| |||||||    
T  21782660 actttattttagcttttgttatagaaatagcttaaacataaa 21782701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 28578871 - 28578834
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttataca 114  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  28578871 actttattttatcttatgttatagaaatagcttataca 28578834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 29588856 - 29588819
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataa 29588819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 42573881 - 42573910
Alignment:
Q  88 tcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||||||||||||||||||||    
T  42573881 tcttttgttatagaaatagcttatacataa 42573910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 3237075 - 3237023
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaaa-actcatatgataa 132  Q
    |||||| |||||||| |||||||||||||||| |||||| ||| |||||||||    
T  3237075 tattttgtcttttgtaatagaaatagcttatagataaaacacttatatgataa 3237023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 9202828 - 9202912
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatgcaataagc 149  Q
    |||| ||| |||||||||||| ||||||| || |||||||||||||| ||||  ||| || ||||||| ||||| ||| ||||||    
T  9202828 aaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttatcatgataaacacttgtgctataagc 9202912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 28586857 - 28586897
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||||||||||  |||||||||    
T  28586857 actttattttatcttttgttatagaaatagtgtatacataa 28586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 29115304 - 29115344
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  29115304 actttattttaccttttgttgtagaaatagcttatacataa 29115344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 29117021 - 29117061
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||||||||| | |||||||||    
T  29117021 actttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 29590831 - 29590867
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| |||||||||||||||||||| |||||    
T  29590831 actttattttatcttttgttatagaaatagcatatac 29590867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 34975357 - 34975317
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  34975357 actttatttcatcttttgttatagaaatagtttatacataa 34975317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 38047946 - 38047986
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||| ||| |||||||||||||||    
T  38047946 actttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 38819672 - 38819736
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||| |||||||||||||||||||| |||||||||   || ||||||||||  ||||||| ||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttatgccataa 38819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 40534154 - 40534102
Alignment:
Q  96 tatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||| |||||    
T  40534154 tatagaaatagcttatacataagtccttatatgataagcgcttatgctataag 40534102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 30338622 - 30338723
Alignment:
Q  16 ttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||||||||||  ||| |||| ||||||||||||||| |||||||   |||| | | |||||||||| | ||||||||||||||||||| ||||||||    
T  30338622 ttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacat 30338721  T
Q  116 aa 117  Q
    ||    
T  30338722 aa 30338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 7749175 - 7749244
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||| ||||| ||| ||||||||| |||||    
T  7749175 tttattttctcttttattatagaaatagcgtatacataaacacttatatggtaaacacttatgctataag 7749244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 6364149 - 6364088
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||  || ||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  6364149 agcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 17884066 - 17884009
Alignment:
Q  58 cttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    ||||| |||||| ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  17884066 cttatacaaaaacaatttaactttattttatcttttgttatagaaatagcttacacat 17884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 51044550 - 51044591
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  51044550 actttattttatcttttgttatagaaatagcttatacataaa 51044591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 3155595 - 3155543
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||| ||| |||||||||||| ||||||| |||||||||||||||||||||    
T  3155595 caaaaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 54986388 - 54986348
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  54986388 ttttgttatagaaatagcttatacataaaaacttatatgat 54986348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 2980575 - 2980626
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    ||||||||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  2980575 ttttgttatagaaatagcttatacataagcacttatatgataaacacttatg 2980626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 42641722 - 42641797
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatgcaataagc 149  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||| ||| || ||||||||  |||||| |||||||    
T  42641722 taacattattttatcttttgttatggaaatagcttatacataaacacttatcatgataagtgcttatgtaataagc 42641797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 49219118 - 49219043
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| | |||||||||||||||| ||||||| |||  ||||||||||||||| |  |||| |||||||||    
T  49219118 actttattttatattttgttatagaaataacttatacctaaccactcatatgataagcgccaatgctataagcact 49219043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 24444015 - 24443945
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||| | ||||||| ||||||| |||||||||||| |||| ||||||||||  ||||||| ||||||    
T  24444015 tttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagc 24443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 46796995 - 46796933
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    |||||||| || ||||||||  ||||||||||| ||||| |||| ||||||||||||||||||    
T  46796995 tttattttatcgtttgttatgaaaatagcttatgcataagaacttatatgataagcacttatg 46796933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 4191712 - 4191663
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||| ||||||||||||||||||||||||||||||  ||| |||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 51555952 - 51556013
Alignment:
Q  71 aatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||  ||| |||||||||    
T  51555952 aatctgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 56480360 - 56480291
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatac 113  Q
    ||||||| ||| | ||||| || ||| ||| |||||||||||| ||||||||||| ||||||||||||||    
T  56480360 aaaacagcttataacttatacataaacaatttaactttattttgtcttttgttatggaaatagcttatac 56480291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 4798650 - 4798690
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  4798650 actttattttatcttttgatatagaaatagcttatacataa 4798690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 25487636 - 25487676
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  25487636 actttattttattttttgttatagaaatagcttatacataa 25487676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 47970297 - 47970257
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  47970297 acttcattttatcttttgttatagaaatagcttatacataa 47970257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 52645845 - 52645881
Alignment:
Q  82 attttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||| |||||||||||||||||||||||||||||||    
T  52645845 attttatcttttgttatagaaatagcttatacataaa 52645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 8703713 - 8703788
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||| |||| || ||||||| |||||||||||||||||||  |||||| ||||||| | |||||  |||||||||    
T  8703713 acttttttttatcctttgttagagaaatagcttatacataagcactcatctgataagtatttatgttataagcact 8703788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 21683568 - 21683611
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||||| || ||||||||||||||||||| |||||||||||    
T  21683568 taactttatcttatcttttgttatagaaatagtttatacataaa 21683611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 21953273 - 21953214
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||||  ||||||| | | ||||||||||| |||||||||||||||||| ||||||||    
T  21953273 agcttatataaaaagagtttgactttattttcccttttgttatagaaatagtttatacat 21953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 24160980 - 24160929
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||| |||||| ||||| || |||||||||||||||||||||||||||    
T  24160980 aaaataatttaacttgattttatcctttgttatagaaatagcttatacataa 24160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 30024679 - 30024624
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||||| |||||||||||||||||| ||||| |||||  ||| |||||||||    
T  30024679 actttattttatcttttgttatagaaataacttatgcataagtacttatatgataa 30024624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 47800632 - 47800581
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaata 105  Q
    ||||||||| |||||| | | |||||||||||| ||||||||||||||||||    
T  47800632 acagcttatacaaaaacattttaactttattttatcttttgttatagaaata 47800581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 19422397 - 19422335
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||| | |||||||||||||||||| |||||||||||  | | ||||||||||| ||||    
T  19422397 actttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 7601751 - 7601698
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| |||||||||||| || |||| ||||| ||||||||||||||||    
T  7601751 caaaaacaatttaactttattttatcctttgctataggaatagcttatacataa 7601698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 9843775 - 9843820
Alignment:
Q  95 ttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    |||||||||||||||||||||||  | | |||||||||||||||||    
T  9843775 ttatagaaatagcttatacataagcagttatatgataagcacttat 9843820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 11262846 - 11262899
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||| | |||| |||||||||||| ||||||||||| ||| |||||||||    
T  11262846 tttattttgtattttattatagaaataggttatacataaatacttatatgataa 11262899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 20907152 - 20907111
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| |||||| ||||| ||||||||||||||||||    
T  20907152 actttattttatcttttcttatacaaatagcttatacataaa 20907111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 23503551 - 23503498
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| |||||||||||| | ||||||||||||| ||| ||||||||||    
T  23503551 caaaaataatttaactttattttatattttgttatagaattagattatacataa 23503498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 34368876 - 34368820
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||| ||||| ||| | ||||| |||| ||||||||||||||||||||||||||    
T  34368876 agcttatg-aaaaacaatttgactttgttttatcttttgttatagaaatagcttatac 34368820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 35958634 - 35958593
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  35958634 actttattttaacttatgttatagaaatagcttatacataaa 35958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 41050664 - 41050619
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    ||||||||||||||||||| |||||||| || ||| ||||||||||    
T  41050664 tcttttgttatagaaatagtttatacattaacacttatatgataag 41050619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44019502 - 44019445
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||||| |||||| ||||||||||||| |||||||| | ||| || ||||||||    
T  44019502 actttattttatcttttcttatagaaatagcctatacatacacacttatctgataagc 44019445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 46019718 - 46019767
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatat 127  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| ||| ||||    
T  46019718 ctttattttttcttttgttctagaaatagcttacacataaacacttatat 46019767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 54277405 - 54277462
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||||| ||||||||||||||| ||| ||||||| ||| ||| || ||||||||    
T  54277405 actttattttatcttttgttatagaagtagtttatacacaaatacttatctgataagc 54277462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 8422928 - 8422968
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  8422928 actttattttatctttttttataaaaatagcttatacataa 8422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 9680643 - 9680603
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| |||| ||||||||||||||||||    
T  9680643 actttattttatcttttattatcgaaatagcttatacataa 9680603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 21593102 - 21593142
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||| ||||||||||||| ||||||||||    
T  21593102 actttattttatctttagttatagaaatagtttatacataa 21593142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 24929472 - 24929416
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||| ||||||||||||||||||| | ||||| ||| | | ||||||||||    
T  24929472 actttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataag 24929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 24936286 - 24936215
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||||| | |||||||||||||||| |||||||||||  ||| |||| ||||||  |||||| |||||||||    
T  24936286 ttattttatattttgttatagaaataacttatacataaccacttatat-ataagcctttatgctataagcact 24936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 35743282 - 35743226
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    ||||||||| |||||||||||||||||| ||| ||||| || ||  |||||||||||    
T  35743282 ctttattttatcttttgttatagaaataacttgtacatcaacacatatatgataagc 35743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 14482181 - 14482110
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| ||||||||||||||||||| ||||||||||  ||| |||||||||||||| |||| |||||    
T  14482181 actttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataag 14482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 39392752 - 39392822
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||||||||| ||||||||||||||||||| |||||||||   ||| ||||||||||||||||||| ||||    
T  39392752 actttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataa 39392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 7646215 - 7646112
Alignment:
Q  47 acagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactca-tatgataagcacttatgcaat 145  Q
    |||||||| || |||| |||||| ||| ||||||||||||  ||||| |||||||||||||||||||||||  ||| | || || || ||||||||||||    
T  7646215 acagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataaccacttattacgagaatcacttatgcaat 7646116  T
Q  146 aagc 149  Q
    ||||    
T  7646115 aagc 7646112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 26215477 - 26215435
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  26215477 taactttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 42597380 - 42597319
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactt 138  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||| |||  ||||||||||    
T  42597380 actttattttatcttttgttatagaaatagcttatacataagtacttatagcataagcactt 42597319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 4558788 - 4558736
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| ||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  4558788 aaaataatttaactttattttatcttttattatagaaatagcttatacataaa 4558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 40357878 - 40357815
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    |||||||||| ||||||||||||  || |||||||||||||| ||| |||||||||||| ||||    
T  40357878 actttattttatcttttgttatatcaagagcttatacataaatacttatatgataagcatttat 40357815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 35869814 - 35869744
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||| | ||||||| ||||||| |||||||||||| |||| ||||||||||  ||||||| ||||||    
T  35869814 tttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagc 35869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 1112853 - 1112792
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||  |||| ||| |||| ||||||| |||||||||||||||||||| |||||||||    
T  1112853 agcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataa 1112792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 32976398 - 32976353
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaa 120  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||    
T  32976398 taactttattttatcttttgttatagaaatagcgtatacatgaaaa 32976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 37444485 - 37444546
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| | |||| ||| |||||||| ||| ||||||||||||| ||||||||||||||||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataa 37444546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 40728509 - 40728566
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||||| |||||||||||||||||| ||||| ||| || ||| |||||||||||    
T  40728509 actttattttatcttttgttatagaaataacttatgcatgaacacttatatgataagc 40728566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 28769444 - 28769500
Alignment:
Q  91 tttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||||||||| ||||||||||||||||  | | ||||||||||||||||||| ||||    
T  28769444 tttgttataggaatagcttatacataagcatttatatgataagcacttatgctataa 28769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 14949863 - 14949812
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||| ||||||||||||||| |||||||||||||| ||||  ||||||||    
T  14949863 tattttatcttttgttatagaagtagcttatacataagaacttgtatgataa 14949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 18930713 - 18930642
Alignment:
Q  45 aaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||||||||||| ||| ||| || ||| |||||||  ||| |||||||||||| || |||||||||||||    
T  18930713 aaacagtttacagcatatacaataacaatttaactttcatttatcttttgttatataactagcttatacata 18930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 29699233 - 29699158
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| |||||||||||||||||| ||| |||||||  | | |||||||||  | |||||| |||||||||    
T  29699233 actttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataagcact 29699158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 1470947 - 1470985
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  1470947 actttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 6918270 - 6918332
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| |||||| ||||| |||||||||||| | ||| ||| |||| |||||||||||    
T  6918270 actttattttatcttttattatataaatagcttatatacaaacacttatattataagcactta 6918332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 8536152 - 8536214
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||||||||||||||||||||||||||  ||| |||||| ||||| | |||  |||||||||    
T  8536152 ttttgttatagaaatagcttatacataagcacttatatgacaagcattcatggtataagcact 8536214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 8629075 - 8629025
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||| |||||||    
T  8629075 ttttgttatagaaatagcttataaataagcacttatatgataaacacttat 8629025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 10114466 - 10114396
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatgcaataagc 149  Q
    ||||||| ||||||| ||||||||||||||||||||||  ||| || || |||| ||||||||| ||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataagcacttatcatcataaccacttatgctataagc 10114396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 35298570 - 35298624
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||||| ||||||||||  ||||||||||||||||||  ||| |||||||||    
T  35298570 ctttattttatcttttgttactgaaatagcttatacataagcacttatatgataa 35298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 37353267 - 37353379
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    ||||||| |||  ||||||| |||||| |||||||| | ||||| ||| ||| ||| ||  |||||| ||| |||||||||||  |||||||||||||||    
T  37353267 ttttcagattattttcataagctctcaaagatagcttaagaaaa-cagcttatagcatacacaaaaacaatttaactttattta-tcttttgttatagaa 37353364  T
Q  103 atagcttatacataa 117  Q
    |||| || |||||||    
T  37353365 atagtttgtacataa 37353379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 43208239 - 43208277
Alignment:
Q  92 ttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  43208239 ttgttatagaaatagcttatacataaatacttatatgat 43208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 3645920 - 3645977
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||| |||||||||||||||||||| ||  ||| ||||||||| ||||||||| ||||    
T  3645920 ttttcttatagaaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 9956902 - 9956943
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| ||||||||||||||||||||| | ||||||    
T  9956902 aactttattttatcttttgttatagaaatagctcaaacataa 9956943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 11056757 - 11056814
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||||  |||||||||||||||||||| || ||| || ||| ||||||||||    
T  11056757 aactttatttttccttttgttatagaaatagctcatgcatgaacacttatatgataag 11056814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 16163368 - 16163409
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  16163368 aactttgttttatctttagttatagaaatagcttatacataa 16163409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 33697054 - 33697087
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaac 121  Q
    ||||||||||||||||||||||||| ||||||||    
T  33697054 tcttttgttatagaaatagcttatatataaaaac 33697087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 35453712 - 35453789
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||||| ||||||||| |||||| || ||||| ||||  ||| |||||| |||| ||||||| |||| ||||    
T  35453712 taactttattttatcttttgttgtagaaacagattatatataagtacttatatgacaagcgcttatgctataatcact 35453789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 40598924 - 40598984
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||| ||||| ||| ||||||||||   ||||||||| ||||||||||||||||||||    
T  40598924 agcttatg-aaaaacaatttaactttattccatcttttgttttagaaatagcttatacataa 40598984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 4389906 - 4389850
Alignment:
Q  93 tgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    ||||||||||||||||||| ||||    |||||||||||||||||| ||| ||||||    
T  4389906 tgttatagaaatagcttattcatatgtgctcatatgataagcacttctgctataagc 4389850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 10727174 - 10727106
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||||||  ||||||| |||||||||||||||| |||||  ||| ||||||| | ||||||||| ||||    
T  10727174 tttatttcatcttttgctatagaaatagcttatgcataagcacttatatgatgaacacttatgctataa 10727106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 10939385 - 10939345
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||||| |||||||| ||||||||| ||||||||||||    
T  10939385 ctttattttatcttttgtaatagaaataacttatacataaa 10939345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 11000631 - 11000687
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    ||||||| | |||| ||| | |||||||||| ||||||||||| |||||||||||||    
T  11000631 agcttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 11119090 - 11119130
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||||||||| | |||||||||    
T  11119090 actttattttatcttttgttatagaaatatcgtatacataa 11119130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 26820178 - 26820142
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| |||||||||||||||||| |||||||    
T  26820178 actttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 31915360 - 31915400
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||| | |||||||||||||| |||||||||||||||    
T  31915360 actttattctatcttttgttatagatatagcttatacataa 31915400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 23895313 - 23895250
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||| |||||||||||||||||||||||||||||| |||| ||||||||||  |||||||    
T  23895313 tttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgc 23895250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 4256112 - 4256198
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatg 141  Q
    ||||||| | |||| ||| |||||||||| | ||||||||| ||||||||||||||||||||| ||  || ||||||||||||||||    
T  4256112 agcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataaacacgtatcatgataagcacttatg 4256198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 38578527 - 38578469
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttataca 114  Q
    ||||||| |||||| ||| ||||||||| || |||||||||||||||||||||||||||    
T  38578527 agcttatacaaaaataatttaactttatgttatcttttgttatagaaatagcttataca 38578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 34619448 - 34619509
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| |||||| ||| |||| ||||||| ||||||||||||||||| ||||||||||||    
T  34619448 agcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataa 34619509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 4445707 - 4445647
Alignment:
Q  57 gcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||| ||| |||||||||| | | |||||||||||||||||| |||||||||    
T  4445707 gcttatgcaaaaaaaatttaactttattgtattttttgttatagaaatagcctatacataa 4445647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 33339509 - 33339573
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||| ||  ||||||||| ||||||    
T  33339509 taacttcattttatcttttggtatagaaatagcttatacataaacacctatatgataaccactta 33339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 44236621 - 44236693
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    ||||||||||| || |||||||||| |||||||| |||| ||| ||| || |||||||||||||||| |||||    
T  44236621 aactttattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataag 44236693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 46252747 - 46252811
Alignment:
Q  51 tttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||| |||||||||||||  ||| |||||||||||| |||||||||||| ||||||| |||||||    
T  46252747 tttaaagcttatgcaaaagaaatttaactttattttatcttttgttataaaaatagcctatacat 46252811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 50319271 - 50319231
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  50319271 actttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 7028294 - 7028231
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| |||||| ||  |||||||||||| ||||||| ||||||||||| ||||||||||    
T  7028294 acagcttatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataa 7028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 16982027 - 16982090
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    |||||||||| ||||||||||| ||||||  ||||||||||| ||| ||||||||||| |||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacacttatatgataagctcttat 16982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 172666 - 172708
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  172666 taactttatgttatcttttgttatagaaatagcttatacataa 172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 4549847 - 4549805
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  4549847 taactttattttatcttttgttatagaaatagcttgtacataa 4549805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 4700155 - 4700197
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  4700155 taactttattttatcttttgttatagaaatagcttgtacataa 4700197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7472363 - 7472251
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    |||||||||||  ||||||| |||||  |||||||| ||| ||| ||| ||| || |||| |||||| ||| |||||| ||| | |||||||||||||||    
T  7472363 ttttcagcttattttcataagctctccaagatagcttatggaaa-cagcttatagattatacaaaaacaatttaactt-attatatcttttgttatagaa 7472266  T
Q  103 atagcttatacataa 117  Q
    |||||||||| ||||    
T  7472265 atagcttataaataa 7472251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 36151563 - 36151637
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||| |||| | ||||| | |||| ||| | |||||||||| ||||||||||| |||||||||||||||||||    
T  36151563 aaaacaatttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 34952267 - 34952155
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    |||||||||||  |||||||  |||| | ||||||| ||||||| ||  ||||||||||| | |||| ||| ||||||||||||  ||| || | |||||    
T  34952267 ttttcagcttattttcataagttctctttgatagcttatgaaaa-caacttacagcttattcgaaaacaatttaactttattttaacttctgctctagaa 34952169  T
Q  103 atagcttatacata 116  Q
    ||||||||||||||    
T  34952168 atagcttatacata 34952155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 25707138 - 25707075
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    ||||||||| |||||||||||||||||| |||||| || |||  | |||||||||||||||||||    
T  25707138 ctttattttatcttttgttatagaaatatcttatagat-aaattttatatgataagcacttatgc 25707075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 37593749 - 37593801
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| |||||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  37593749 aaaacaatctaacattattttatcttgtgttatagaaataccttatacataaa 37593801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 44032057 - 44032145
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||| |||||| |||||||   |||| ||| | ||||||||||  |||||||||||||||  ||||||||||||| ||| |||||||||    
T  44032057 aaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 2194446 - 2194489
Alignment:
Q  74 ctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  2194446 ctaactttattttatctattgttatagaaatagcttatgcataa 2194489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 4200208 - 4200133
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| |||||||||||| ||||| |||||| ||||| ||| | ||||||||  ||||||| ||| |||||    
T  4200208 actttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttatgctatacgcact 4200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 9572178 - 9572237
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    ||||||| |||||  ||| |||||||||||| ||||||| ||||||||||||| ||||||    
T  9572178 agcttatacaaaagcaatttaactttattttatcttttgctatagaaatagctaatacat 9572237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 13037832 - 13037781
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    ||||||||||||||||||||||||||||||  ||| |||||| ||| |||||    
T  13037832 tcttttgttatagaaatagcttatacataagcacttatatgacaagaactta 13037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 30815724 - 30815767
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||||| |||||||||||||||| |||||| |||||||    
T  30815724 taactttattttatcttttgttatagaaaaagcttagacataaa 30815767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 37841998 - 37841939
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    ||||||| | |||| ||| |||||||||||| || |||||||||| ||||||||||||||    
T  37841998 agcttatacgaaaacaatttaactttattttatcatttgttataggaatagcttatacat 37841939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 49557122 - 49557083
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttataca 114  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  49557122 taactttattttatcttttgttatagaaataacttataca 49557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 172318 - 172280
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  172318 tttattttatctttagttatagaaatagcttatacataa 172280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 871024 - 870962
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||| ||||| |||||||||||| |||||| ||||||||||  ||| ||||||||||| ||||    
T  871024 acttaattttatcttttgttataaaaatagtttatacataagcacttatatgataagcgctta 870962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 2462948 - 2462906
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| || | ||||||||||||||||||||||||||||    
T  2462948 taactttatcttatattttgttatagaaatagcttatacataa 2462906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 3887721 - 3887763
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||    
T  3887721 taactttattttatcttttgctattgaaatagcttatacataa 3887763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 6976929 - 6976887
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| || |||||||||||||||||| |||||||||||    
T  6976929 taactttatcttatcttttgttatagaaatatcttatacataa 6976887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 23373381 - 23373443
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| ||||||| ||||||||||||| |||| |||  | | ||||||||||||||||    
T  23373381 actttattttatcttttgatatagaaatagctaatacgtaagcagttatatgataagcactta 23373443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 40357977 - 40358039
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| ||  |||||||||||||||||||||||||   ||| |||| |||||||||||    
T  40357977 actttattttatccattgttatagaaatagcttatacatagtcacttatataataagcactta 40358039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 45999379 - 45999417
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacat 115  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  45999379 actttatcttatcttttgttatagaaatagcttatacat 45999417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 4768914 - 4768955
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||    
T  4768914 aactttattttatcttttggtatagcaatagcttatacataa 4768955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 7274030 - 7274095
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||  |||||||||||| ||||| | |||||||||  | | |||||||||||||||||||    
T  7274030 actttatttcatcttttgttataaaaataacatatacataagcatttatatgataagcacttatgc 7274095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 8852850 - 8852801
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||    
T  8852850 aaaacaatataactttattttatcttttgttgtaaaaatagcttatacat 8852801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 15360873 - 15360832
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| |||||||||||||||||| || |||||||||    
T  15360873 actttattttatcttttgttatagaaataactaatacataaa 15360832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 15687143 - 15687196
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagctt 109  Q
    ||||||| | |||| ||| |||||||||||| | ||||||||||||||||||||    
T  15687143 agcttatacgaaaacaatttaactttattttatattttgttatagaaatagctt 15687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 28837407 - 28837472
Alignment:
Q  43 aaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagct 108  Q
    ||||||||||||  |||||| |||||| ||||||||| |||| | |||||||| ||| ||||||||    
T  28837407 aaaaacagtttattgcttatacaaaaacaatctaactatattgtatcttttgtcataaaaatagct 28837472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 37842444 - 37842485
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  37842444 taactttatttcatcttttgctatagaaatagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 43372018 - 43372115
Alignment:
Q  45 aaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||| ||||| ||||||||  |||| ||| | ||| |||||| ||| |||||||||||||||| |||||||||    | ||||||||||| |||||||    
T  43372018 aaactgtttatagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataagcgcttatgc 43372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 43722405 - 43722446
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| |||| ||||||| |||||||||||||||||    
T  43722405 aactttattttatcttctgttatataaatagcttatacataa 43722446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 48282113 - 48282036
Alignment:
Q  77 actttattttctcttt-tgttatagaaatagcttatacataaaaactcatatgataagcac-ttatgcaataagcact 152  Q
    |||||||||| ||||| | ||||||||||||||| |||||||  ||| ||||||||||| | ||| ||||||||||||    
T  48282113 actttattttatctttcttttatagaaatagcttttacataagcacttatatgataagcgcattaagcaataagcact 48282036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 49517049 - 49517012
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttataca 114  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  49517049 actttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 1432527 - 1432455
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||| |||| |||||||  ||||| |||  |||| |||||| ||||||  |||||||||||||||||||||    
T  1432527 aaaacaatttatagcttataaaaaaacaattgaactctattttatcttttactatagaaatagcttatacata 1432455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 9507089 - 9507129
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacat 115  Q
    |||| |||||||  |||||||||||||||||||||||||||    
T  9507089 taacattattttaacttttgttatagaaatagcttatacat 9507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 17269229 - 17269189
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| |||||||| |||||||| |||||||||||    
T  17269229 actttattttcacttttgttctagaaataacttatacataa 17269189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 27140487 - 27140423
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||  ||||| ||| |||  ||||||| |||||||||||||||||| |||| |||||||    
T  27140487 acagcttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataaa 27140423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 31294616 - 31294652
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  31294616 tattttatcttttgttatagaaatagctaatacataa 31294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 36641854 - 36641814
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||||||||||||||| |||||| ||||    
T  36641854 actttattttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 38651500 - 38651540
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| ||||||||||||||| ||||||||||||||    
T  38651500 actttagtttatcttttgttatagaattagcttatacataa 38651540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 40304147 - 40304207
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||| |||||||||||| ||||||||||||| |||  | | ||||||||| ||||||    
T  40304147 tttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacactta 40304207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 43420060 - 43420020
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||| ||||| ||||||||||||||||||    
T  43420060 actttattttatctttcgttatggaaatagcttatacataa 43420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 46499945 - 46499985
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  46499945 actttattttatcttttcttatagaaatagcttatagataa 46499985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 49060540 - 49060462
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||  ||||| ||| | |||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||    
T  49060540 agcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataagc 49060462  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 31341173 - 31341101
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||||| |||||||||||| |||||||||||||||||  | | | ||||||||| ||||||||||||||    
T  31341173 actttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagc 31341101  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 27389344 - 27389297
Alignment:
Q  95 ttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  27389344 ttatagaaatagcttatacataaacacttatatgataagcacttatgc 27389297  T

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Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 5373204 - 5373142
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||||| |||||||||||||||||||| |||||||||  ||| | ||||||||||||||    
T  5373204 actttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcactta 5373142  T

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Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 30134028 - 30133957
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagca 150  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||  |||||||||| ||||||| |||||||    
T  30134028 actttattttatcttttgttgtaaaaatagcttatacataaacact--tatgataagcgcttatgctataagca 30133957  T

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Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 43152981 - 43153030
Alignment:
Q  65 aaaaagaatctaactttattttctcttttgttatagaaatagcttataca 114  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  43152981 aaaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

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Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 27481399 - 27481459
Alignment:
Q  91 tttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcac 151  Q
    |||||||||||||||||||||||||||| ||| |||| |||| || |||||| ||||||||    
T  27481399 tttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagcac 27481459  T

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Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 1431399 - 1431470
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| | |||  |||| |||||| |||||||||||| ||| ||||||||||||||||||| |||||    
T  1431399 actttattttatttttcattatggaaataacttatacataaacacttatatgataagcacttatgctataag 1431470  T

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Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 28613606 - 28613665
Alignment:
Q  58 cttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||| |||||| ||| ||||||| |||| |||||||||||| |||||||||||||||||    
T  28613606 cttatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttatacataa 28613665  T

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Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 44241841 - 44241782
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||||||| ||| |||||||||||||| |||||||||| | ||| |||||||||||    
T  44241841 taactttattttatctgttgttatagaaataacttatacatacacacttatatgataagc 44241782  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 47004066 - 47003991
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| ||| ||||||||||||||||||| | ||||| ||| ||||||||| || || ||| |||||||||    
T  47004066 actttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataagcact 47003991  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 28178948 - 28178910
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28178948 actttattttatcttttgttatagaaatagcttatacat 28178910  T

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Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 39169473 - 39169579
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgca 143  Q
    ||||||||||| || |||| |||||| | ||| |||| ||||| |||| ||| || |||||||||||| | |||   |||||||||||||| |||||||     
T  39169473 aaaacagtttatagattatacaaaaacagtctgacttcattttttcttgtgtaatggaaatagcttattcgtaagcgctcatatgataagcgcttatgct 39169572  T
Q  144 ataagca 150  Q
    |||||||    
T  39169573 ataagca 39169579  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 40009467 - 40009409
Alignment:
Q  59 ttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||| ||||| ||| |||||||||||| |||||||||||| ||| |||||||||||||    
T  40009467 ttatggaaaaacaatttaactttattttgtcttttgttataaaaacagcttatacataa 40009409  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 2223116 - 2223071
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  2223116 tcttttgttatagaaatagcttatacataaacacttatacgataag 2223071  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 10079435 - 10079488
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| || ||||||||    
T  10079435 tattttatcttttgttatagaagtagcttatacatacaaacttatttgataagc 10079488  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 28702733 - 28702696
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||    
T  28702733 ttttatcttttgttatagaaatagcttatacataaaaa 28702696  T

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Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 33894599 - 33894562
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33894599 ttattttatcttttgttatagaaatagcttatacataa 33894562  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 35808999 - 35809036
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35808999 tattttatcttttgttatagaaatagcttatacataaa 35809036  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 36598432 - 36598477
Alignment:
Q  97 atagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  36598432 atagaaatagcttatacataaacactaatatgataaacacttatgc 36598477  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 39551650 - 39551695
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  39551650 tcttttgttatagaaatagcttatacttaaatacttatatgataag 39551695  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 42656515 - 42656454
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||||||  || | |||||||||| ||||||||||||||||||||||||| ||||    
T  42656515 agcttatacaaaaatgatttgactttattttatcttttgttatagaaatagcttatatataa 42656454  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 24975882 - 24975818
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    ||||||||| ||||||||||||||| ||| |||||||| |  ||| ||||||||||||| |||||    
T  24975882 ctttattttatcttttgttatagaagtagattatacatcagcacttatatgataagcacatatgc 24975818  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 27517955 - 27518006
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  27517955 tttttttatagaaa-agcttatacataaacacttatatgataagcacttatgc 27518006  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 35536086 - 35536046
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  35536086 actttattttatcttatgttatagaaatagcttatacataa 35536046  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 42281604 - 42281652
Alignment:
Q  91 tttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    ||||| ||||||||||||||||||| || ||||||||||||| ||||||    
T  42281604 tttgtcatagaaatagcttatacattaacactcatatgataaacactta 42281652  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 1432060 - 1432103
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaact 122  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||    
T  1432060 tttattttatcttttgttatagaaataacttatacataagaact 1432103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 2894797 - 2894758
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacat 115  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  2894797 aactttaatttatcttttgttatagaaatagcttatacat 2894758  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 3241420 - 3241345
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| | |||||||||||||||||||| || ||||  ||| |||||||| ||||||| |  |||||||||    
T  3241420 actttattttttattttgttatagaaatagcttctatataagcacttatatgatatgcacttacgatataagcact 3241345  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 4591518 - 4591471
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatat 127  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| ||||    
T  4591518 ttattttatcttttgttatagagatagcttatacataaacacttatat 4591471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 5006600 - 5006639
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacata 116  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  5006600 actttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 7244681 - 7244626
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||| |||| ||||||| ||||||||||||||||||||||  ||| |||||||||    
T  7244681 actttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 24973921 - 24973870
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    |||||||| |||||||||||||||||||||| |||||||  ||| |||||||    
T  24973921 tttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 35007581 - 35007542
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  35007581 tttattttatctttagttatagaaatagcttatacataaa 35007542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 43250768 - 43250811
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||    
T  43250768 taactttattttatcttttgttctagacatagcttatacataaa 43250811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 6824908 - 6824858
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||| ||| ||||||| || | |||||||||||||||||||||||||||||    
T  6824908 aaaacaatttaactttgttctatcttttgttatagaaatagcttatacata 6824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 8445264 - 8445190
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||||||| |||||||||||| |||||||||||| | ||  ||| ||||||||| |||| |||| ||| |||||    
T  8445264 ctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataaacactaatgctatacgcact 8445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 22759164 - 22759110
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||||| |||||||||||| |||||||||| |||||||  || |||||||||    
T  22759164 ctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataa 22759110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 27492762 - 27492720
Alignment:
Q  89 cttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||||||||||| |||||||||| |||| ||||||||    
T  27492762 cttttgttatagaaatagtttatacataagaacttatatgata 27492720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 30496683 - 30496629
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||| || |||||    
T  30496683 actttattttatattttgttatagaaatagtttatacataaacacttatgtgata 30496629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 46213782 - 46213728
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||| | |||||||||||||||||||| |||||||  ||| ||||||||    
T  46213782 actttattttatattttgttatagaaatagcttttacataagcacttatatgata 46213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 1417243 - 1417202
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  1417243 actttattttatcttttgttatataaatagtttatacataaa 1417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 27626215 - 27626256
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||||||  |||||| |||||||||||||||||||||||    
T  27626215 actttattttagcttttgatatagaaatagcttatacataaa 27626256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 34083583 - 34083644
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaata 105  Q
    ||||||| ||| ||||||| || ||| ||| |||||||||||| ||||||| ||||||||||    
T  34083583 aaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 46223163 - 46223204
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||| ||| ||||||||||| |||||||||||||||||||    
T  46223163 actttaatttatcttttgttatggaaatagcttatacataaa 46223204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 5276203 - 5276163
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| || |||||||||||| |||||||||||||||||    
T  5276203 actttatgttatcttttgttataaaaatagcttatacataa 5276163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 25670684 - 25670716
Alignment:
Q  85 ttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||||| |||||||||||||||||    
T  25670684 ttctcttttgttataaaaatagcttatacataa 25670716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 37832219 - 37832267
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttataca 114  Q
    |||| |||||||||||||||| | ||||| ||||||||||| |||||||    
T  37832219 aaaacaatctaactttattttatattttgctatagaaatagtttataca 37832267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 39539854 - 39539914
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    ||||||||| ||||| |||| ||||||||||||||| ||  | | ||||||||||||||||    
T  39539854 tttattttcacttttattatcgaaatagcttatacaaaagcagttatatgataagcactta 39539914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 44910583 - 44910551
Alignment:
Q  77 actttattttctcttttgttatagaaatagctt 109  Q
    |||||||||||||||||| ||||||||||||||    
T  44910583 actttattttctcttttgatatagaaatagctt 44910551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 45593810 - 45593850
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  45593810 actttattttatgttttgttacagaaatagcttatacataa 45593850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 45813271 - 45813311
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||| ||||||||||||||||| ||||    
T  45813271 actttattttatcttttggtatagaaatagcttataaataa 45813311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 507220 - 507159
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  507220 agcttatacaaaaacaatctaactttattttatcttttgttatagaaataatttatacataa 507159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 2514681 - 2514610
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||||| |||||| |||||||||||||||||||||||  ||| | |||||||||| |||||| |||||    
T  2514681 actttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 7354181 - 7354111
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||  ||||| ||||| |||||| ||||||    
T  7354181 tttattttatcttttgttatagaaatagtttatacatgaaaacttgtatgaaaagcatttatgctataagc 7354111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 9093614 - 9093687
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||| ||||||| | |||| ||| |||||||||||| ||||||| |||||||||||||||| |||||    
T  9093614 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataa 9093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 10452453 - 10452522
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||||| | ||||||||||||||||||||||||||||  ||| ||||||||  ||||||||| |||||    
T  10452453 tttattttatattttgttatagaaatagcttatacataagcactgatatgatagccacttatgctataag 10452522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 29274287 - 29274360
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| |||||||   |||| ||| | |||||||||| ||||||| ||||||||||||||||||||||    
T  29274287 aaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 769151 - 769087
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagct 108  Q
    ||||||||||| ||||||| |||||| ||  ||||||||||||  ||||||||||||||||||||    
T  769151 aaaacagtttatagcttatacaaaaaaaaattaactttattttagcttttgttatagaaatagct 769087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 2206641 - 2206494
Alignment:
Q  4 tttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaa 103  Q
    ||||||||||| |  ||||||||||  |||||||| ||| ||| ||||| | |||||||  ||||| |||   |||||||||| |||||||||||| |||    
T  2206641 tttcagcttaattctataaactctccaagatagcttatgtaaa-cagttcatagcttatataaaaacaattatactttattttatcttttgttataaaaa 2206543  T
Q  104 tagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    || |||||||| |||  || ||| ||||||  ||||||| |||||||||    
T  2206542 taacttatacagaaatgcttatacgataagagcttatgctataagcact 2206494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 2735081 - 2735013
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    ||||||| ||| || |||| |||||| ||| |||||||||||| |||||||||||||| ||||||||||    
T  2735081 aaaacagcttatagattatacaaaaataatttaactttattttatcttttgttatagacatagcttata 2735013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 8349743 - 8349811
Alignment:
Q  65 aaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    ||||| ||| |||||||||||| |||||||||| |||||||| ||||||| ||| ||| ||||||||||    
T  8349743 aaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataag 8349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 4006766 - 4006653
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    |||||||||||  ||||||| ||||||  ||||||| ||||||| ||  ||| |||||||  ||||| ||| | |||||||||| || ||||||||||||    
T  4006766 ttttcagcttattttcataacctctcagggatagcttatgaaaa-caacttatagcttatataaaaacaatttgactttattttatcatttgttatagaa 4006668  T
Q  103 atagcttatacataa 117  Q
    ||| ||||| |||||    
T  4006667 atatcttatgcataa 4006653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 24836290 - 24836340
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatat 127  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||| ||||    
T  24836290 actttattttatcttttgttatagaaataacttatacataaatacttatat 24836340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 32975957 - 32975887
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataa 147  Q
    |||||||||| | |||||||| ||||||| |||||||||||| ||| |||||| |||| ||||||| ||||    
T  32975957 actttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 33911370 - 33911436
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    |||||||||||  |||||||||||| |||||| ||||||||||| ||| |||| |||| ||||||||    
T  33911370 taactttatttgatcttttgttataaaaatagattatacataaacacttatattataatcacttatg 33911436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 4248937 - 4248872
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||| ||||||||||| ||||||||||||| ||||  ||| |||||| |||| |||||||    
T  4248937 actttattttatcttttgttattgaaatagcttatatataagcacttatatgacaagcgcttatgc 4248872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 4420596 - 4420555
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  4420596 actttattttatcttttgttatagaagtagcttatacataaa 4420555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 20671923 - 20671996
Alignment:
Q  44 aaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| |||| ||||||| | |||| ||| | |||||||||| ||||||| | ||||||||||||||||||||    
T  20671923 aaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataa 20671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 22742345 - 22742280
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgc 142  Q
    |||||||||| || ||||||||| |||||||||||| |||| |||| ||| ||||||| |||||||    
T  22742345 actttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttatgc 22742280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 33067138 - 33067093
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaact 122  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||    
T  33067138 actttattttcgcttttcttatagtaatagcttatacataaaaact 33067093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 33068655 - 33068727
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    ||||||| |||||||||||||||||| |||||||||||  | | || |||||||| ||||||| |||| ||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacact 33068727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 264352 - 264277
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatgcaataagc 149  Q
    |||||||||||| ||||||| | ||||||||||||||| ||||  ||| || ||||||||||||| ||| ||||||    
T  264352 taactttattttatcttttgctttagaaatagcttatatataagcacttatcatgataagcacttgtgctataagc 264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 1402977 - 1402942
Alignment:
Q  75 taactttattttctcttttgttatagaaatagctta 110  Q
    |||||||||||| |||||||||||||||||||||||    
T  1402977 taactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 10032535 - 10032484
Alignment:
Q  92 ttgttatagaaatagcttatacataaaaactcatatgataagcacttatgca 143  Q
    |||||||| |||||||||||||||||| | | |||||||||| |||||||||    
T  10032535 ttgttataaaaatagcttatacataaacatttatatgataagtacttatgca 10032484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 10749308 - 10749382
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatg 141  Q
    |||| ||| |||||||||||| |||||| ||||||||||| ||||||||||| | || ||||||||| | ||||||    
T  10749308 aaaataatttaactttattttatcttttattatagaaata-cttatacataacatcttatatgataaacgcttatg 10749382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 33500574 - 33500613
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  33500574 tttactttatcttttgttatagaaatagcttatacataaa 33500613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 781364 - 781326
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  781364 actttattttatcttttattatagaaatagcttatacat 781326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 4247731 - 4247765
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||||||||||||||||||||||||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataa 4247765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 8470079 - 8470141
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    ||||||||||||| ||||||| |||||||||||||  ||||  ||| ||| ||||||||||||    
T  8470079 actttattttctcatttgttacagaaatagcttatttataagcacttatacgataagcactta 8470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 20370881 - 20370839
Alignment:
Q  74 ctaactttattttctcttttgttatagaaatagcttatacata 116  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  20370881 ctaagtttattttatcttttgttataaaaatagcttatacata 20370839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 31461651 - 31461617
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||||||||||||||||||||||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataa 31461617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 31624234 - 31624200
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttataca 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  31624234 ttattttatcttttgttatagaaatagcttataca 31624200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 31668789 - 31668831
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||||||||||||||||||||||||  ||| |||||||||    
T  31668789 ttttgttatagaaatagcttatacataagcacttatatgataa 31668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 430454 - 430507
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| |||||||||||  ||||||  ||||||||||||||||||||||    
T  430454 caaaaataatttaactttatttcatctttttatatagaaatagcttatacataa 430507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 2727958 - 2728007
Alignment:
Q  88 tcttttgttatagaaatagcttatacataaaaactcatatgataagcact 137  Q
    |||||||||||||||  |||||||||||||  ||| ||||||||||||||    
T  2727958 tcttttgttatagaagcagcttatacataagcacttatatgataagcact 2728007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 5554861 - 5554910
Alignment:
Q  82 attttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    ||||| |||||||||||||||||| |||||||||||| ||  ||||||||    
T  5554861 attttatcttttgttatagaaataacttatacataaacacgtatatgata 5554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 12631587 - 12631546
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataaaaact 122  Q
    |||||| ||||| |||||||||||||||||||||||| ||||    
T  12631587 tattttatctttggttatagaaatagcttatacataagaact 12631546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 29249440 - 29249395
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgataagca 135  Q
    ||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  29249440 ttttgttatagaaatagctgatacataagcacttatatgataagca 29249395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 34544541 - 34544582
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||| ||| |||||||||||||||||| ||||||||||||    
T  34544541 actttagtttatcttttgttatagaaataacttatacataaa 34544582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 1810393 - 1810445
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||| |||||||||||||||||||||| | |||||  ||| ||||||||    
T  1810393 tttattttatcttttgttatagaaatagcttttgcataagcacttatatgata 1810445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 6647355 - 6647315
Alignment:
Q  90 ttttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  6647355 ttttgttatagaaataacttatacataagcactcatatgat 6647315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 18129804 - 18129848
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagctta 110  Q
    |||| |||||||||||||||| |||||| || |||||||||||||    
T  18129804 aaaacaatctaactttattttatcttttattgtagaaatagctta 18129848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 21959707 - 21959671
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  21959707 actttattttatcttttgttatggaaatagcttatac 21959671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 27889937 - 27889989
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    ||||||| ||| |||||||||||||| ||| |||||||  |||||||||||||    
T  27889937 ttattttatctgttgttatagaaataacttgtacataagcactcatatgataa 27889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 29940775 - 29940739
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| |||||||||||||||| |||||||||    
T  29940775 actttattttatcttttgttatagaaaaagcttatac 29940739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 30865461 - 30865425
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatac 113  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  30865461 actttattttatcttttgttatagaaatagctcatac 30865425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 33416360 - 33416324
Alignment:
Q  81 tattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| |||||||||||| |||||||||||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataa 33416324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 34405084 - 34405028
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    ||||||||||  ||||| |||||||||||||||||| ||||| ||| |||| |||||    
T  34405084 actttattttaacttttattatagaaatagcttatagataaacacttatatcataag 34405028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 1165 - 1219
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  1165 actttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 2810 - 2756
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  2810 actttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 9478276 - 9478220
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagca 135  Q
    |||||||| |||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  9478276 tttattttatctactgttatagaaatagcttatacataaacacttatatgataagca 9478220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 13864629 - 13864577
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatga 129  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||| ||||||    
T  13864629 actttattttaccttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 35459910 - 35459818
Alignment:
Q  56 agcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    ||||||| | |||| ||| | |||||||||| ||||||| |||| |||||||||||||| ||  ||| ||||||||| ||||||||| |||||    
T  35459910 agcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataag 35459818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 5133750 - 5133711
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5133750 ctttattttatcttttgttatagaaatagcttatacataa 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 28803597 - 28803672
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| ||||||||||| |||||| |||||| ||||  ||| |||||||||||| |||||| |||| ||||    
T  28803597 actttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaacact 28803672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 39567884 - 39567809
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcat-atgataagcacttatgcaataagc 149  Q
    |||||||||||| |||||||||||||||||| |||||||| ||   || || ||||||||| ||||||||||||||    
T  39567884 taactttattttatcttttgttatagaaatatcttatacacaagtgcttatcatgataagcgcttatgcaataagc 39567809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 4026814 - 4026756
Alignment:
Q  59 ttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| ||| |||||||||||| ||||||| |||| |||||||||||| ||||    
T  4026814 ttatgcaaaaataatttaactttattttatcttttgctataaaaatagcttatagataa 4026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 31461417 - 31461363
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgata 131  Q
    |||||||||| ||||||||||||||||||||||||| ||||  ||| ||||||||    
T  31461417 actttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 37034023 - 37033965
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagca 135  Q
    |||||||||| |||||| |||||||||||| ||||||||||  | ||||||||||||||    
T  37034023 actttattttatctttttttatagaaatagtttatacataagtattcatatgataagca 37033965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 44606180 - 44606242
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    ||||||||| |||||||||||  |||||||||||||||||| ||| |||| |||||| |||||    
T  44606180 ctttattttatcttttgttatgaaaatagcttatacataaacacttatataataagcgcttat 44606242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 5045248 - 5045289
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  5045248 actttattttatcttttgttataaaaatagcttatacataaa 5045289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 9875548 - 9875601
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgat 130  Q
    |||||||||  ||||||| |||||||||| |||||||||||| |||||||||||    
T  9875548 actttatttattcttttgctatagaaataacttatacataaacactcatatgat 9875601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 33197330 - 33197387
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||||| | ||||||||||||||||||||||||| ||||  ||| |||||||||||    
T  33197330 actttattctatcttttgttatagaaatagcttatagataagcacttatatgataagc 33197387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 36114577 - 36114654
Alignment:
Q  40 atgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||  |||  |||||| |||||| ||| |||||||||||| ||||||||||||||| ||| |||| |||||    
T  36114577 atgaaaaacaacttattgcttatacaaaaacaatttaactttattttatcttttgttatagaactaggttatgcataa 36114654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 38239642 - 38239683
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  38239642 acttgattttatcttttgttatagaaatagcttatacataaa 38239683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 9886283 - 9886215
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    ||||||| | |||| |||||||||||||||||||||||  || ||||||||||||| ||| || |||||    
T  9886283 ttattttttttttttttatagaaatagcttatacataagcacacatatgataagcaattaggctataag 9886215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 17952792 - 17952832
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  17952792 actttattttatcttttgttatagaaatagcttatatataa 17952832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 25609775 - 25609735
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  25609775 actttattttatcttttcttatagaaatagcttatacataa 25609735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 32098399 - 32098439
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  32098399 actttattttatcttttgttatagaaatagcttatatataa 32098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 32694189 - 32694130
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||||||| ||||||| |||||||||||||||||||| || ||| ||||||||||| ||||    
T  32694189 tttattttatcttttgatatagaaatagcttatacat-aatacttatatgataagcgctta 32694130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 3423859 - 3423922
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    |||||||||| ||||||| || | ||||| |||||||||||| |||  ||||||||||||||||    
T  3423859 actttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcacttat 3423922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 5998791 - 5998834
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||||| |||||||||||| |||||||||||| |||||    
T  5998791 taactttattttatcttttgttataaaaatagcttatatataaa 5998834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 34054993 - 34055032
Alignment:
Q  78 ctttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  34054993 ctttattttatcttttgttatagaaatagcctatacataa 34055032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 40672887 - 40672942
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||||| |||||| | ||||||||| |||||||||||||||| | |||||||    
T  40672887 actttattttatcttttttcatagaaataacttatacataaaaacttaaatgataa 40672942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 41240968 - 41241043
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcact 152  Q
    |||||||||| | ||||||||||| ||||| ||||||||||  ||||| ||| ||||  ||||||| |||||||||    
T  41240968 actttattttatattttgttataggaatagtttatacataaccactcacatggtaagtgcttatgccataagcact 41241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8017458 - 8017374
Alignment:
Q  31 agatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||| ||||||| |||||||||||||||   |||| ||| ||||||| |||| || |||| ||||||||||||| ||||||||    
T  8017458 agatagcttatgaaaa-cagtttacagcttatatgaaaataatttaactttgttttatcctttg-tatagaaatagctgatacataa 8017374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 10150736 - 10150678
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||| ||||||| |||||| ||||||||||| |||||||||||| ||| |||| |||||    
T  10150736 taacgttattttatcttttattatagaaataacttatacataaacacttatataataag 10150678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 10198569 - 10198643
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagcac 151  Q
    |||||||||| |||||  |||||  ||||||||||||| ||  ||| |||||||||||||| |||| ||||||||    
T  10198569 actttattttatctttacttatatgaatagcttatacaaaagtacttatatgataagcactcatgctataagcac 10198643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 18962127 - 18962169
Alignment:
Q  75 taactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||||||||| |||||||||||| |||||||| ||||||||    
T  18962127 taactttattttatcttttgttataaaaatagctaatacataa 18962169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 26143731 - 26143769
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttataca 114  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  26143731 aactttattttatcttttgctatagaaatagcttataca 26143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 40837519 - 40837557
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacat 115  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  40837519 actttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 41033047 - 41033081
Alignment:
Q  83 ttttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||||||||||||||||||||||||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataa 41033081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 42457940 - 42457886
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||| ||| |||||||||||| ||||||  ||||||||||| |||||||||||    
T  42457940 caaaaacaatttaactttattttatcttttactatagaaatagattatacataaa 42457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 42907349 - 42907303
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    |||| ||| |||||||||||| |||| ||||||||||||||||||||    
T  42907349 aaaacaatttaactttattttttcttctgttatagaaatagcttata 42907303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 3611218 - 3611165
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||||| ||| ||||||||||||  |||||| |||||||||| |||||||||||    
T  3611218 caaaaacaatttaactttattttaccttttgctatagaaataacttatacataa 3611165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 3673797 - 3673724
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcactta 139  Q
    |||| ||| |||||||||||| | |||||||||||||||| || ||||||||  ||| |||||| || ||||||    
T  3673797 aaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatgacaaacactta 3673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 8820363 - 8820404
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| |||||| |||||||||||| |||||||||||||||||    
T  8820363 aactatattttatcttttgttatataaatagcttatacataa 8820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 11393459 - 11393528
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||| | ||||||| ||||||||||||||||| ||||  ||| ||||||||| ||||| ||| |||||    
T  11393459 tttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11393528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 11410120 - 11410189
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataag 148  Q
    |||||| | ||||||| ||||||||||||||||| ||||  ||| ||||||||| ||||| ||| |||||    
T  11410120 tttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 14209254 - 14209201
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataa 132  Q
    |||||||| ||||||||||| ||||||||||| ||| ||| ||| |||||||||    
T  14209254 tttattttatcttttgttattgaaatagcttagacagaaacacttatatgataa 14209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 15780056 - 15779995
Alignment:
Q  79 tttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 140  Q
    |||||||| |||||||||||||| || | ||||| |||| |||| ||||||||||| |||||    
T  15780056 tttattttatcttttgttatagagattgtttataaataagaacttatatgataagctcttat 15779995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 118
Target Start/End: Complemental strand, 29430723 - 29430694
Alignment:
Q  89 cttttgttatagaaatagcttatacataaa 118  Q
    ||||||||||||||||||||||||||||||    
T  29430723 cttttgttatagaaatagcttatacataaa 29430694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 30990459 - 30990500
Alignment:
Q  76 aactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||| || ||||||||||||| |||||||||||||    
T  30990459 aactttattttatcatttgttatagaaagagcttatacataa 30990500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 35755593 - 35755634
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaa 118  Q
    |||||||||||| |||  ||||||||||||||||||||||||    
T  35755593 actttattttctatttgattatagaaatagcttatacataaa 35755634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 41809337 - 41809374
Alignment:
Q  80 ttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  41809337 ttattttttcttttgttatagaaatagtttatacataa 41809374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 43141549 - 43141496
Alignment:
Q  65 aaaaagaatctaactttattttctcttttgttatagaaatagcttatacataaa 118  Q
    ||||||| | |||||||||||| ||| ||| | |||||||||||||||||||||    
T  43141549 aaaaagattttaactttattttatctattgctctagaaatagcttatacataaa 43141496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 43431535 - 43431592
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagc 134  Q
    |||||| ||| ||||||||||| |||||| ||||||||| || ||| |||||||||||    
T  43431535 actttactttatcttttgttattgaaataacttatacattaacacttatatgataagc 43431592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 44439417 - 44439486
Alignment:
Q  43 aaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    ||||||| |||| ||||||| |||||| | | |||||||||||| | ||||||||| |||||| ||||||    
T  44439417 aaaaacaatttatagcttatacaaaaacagtttaactttattttatattttgttatggaaataacttata 44439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 656843 - 656903
Alignment:
Q  52 ttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    ||||||||||| | |||| ||| | | | |||||| |||||||||||||||||||||||||    
T  656843 ttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagcttata 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 787384 - 787276
Alignment:
Q  3 ttttcagcttaagttcataaactctcatagatagctcatgaaaaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaa 102  Q
    |||||||||||  | |||||||  ||  |||||| | ||||||||||| ||| || || | |||||| ||  | |||||||||| |||| ||||||||||    
T  787384 ttttcagcttatctccataaaccatctaagatagtttatgaaaaacagattatagattttacaaaaacaagttgactttattttatcttgtgttatagaa 787285  T
Q  103 atagcttat 111  Q
    |||||||||    
T  787284 atagcttat 787276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 5867282 - 5867338
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataag 133  Q
    |||||||||  | ||||||| ||||||||||||| ||||||| ||| ||||||||||    
T  5867282 actttatttctttttttgttttagaaatagcttagacataaatacttatatgataag 5867338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 5942904 - 5942832
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||||| ||||||| |||||||||||||| |||| ||  ||  || |||||||  ||||||||||||||    
T  5942904 actttattttatcttttgatatagaaatagcttgtacacaagcaccgatgtgataagtgcttatgcaataagc 5942832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 7825242 - 7825194
Alignment:
Q  66 aaaagaatctaactttattttctcttttgttatagaaatagcttataca 114  Q
    |||| ||| |||||||| ||| |||||||||||| ||||||||||||||    
T  7825242 aaaaaaatttaactttactttatcttttgttataaaaatagcttataca 7825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 10143151 - 10143111
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataa 117  Q
    |||| ||||| |||||||||||||||||| |||||||||||    
T  10143151 acttaattttatcttttgttatagaaataacttatacataa 10143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 15120000 - 15119928
Alignment:
Q  45 aaacagtttacagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||| |||| |||||||| ||||  | ||| |||| |||||  ||||||||||||||| |||||||||||||    
T  15120000 aaacaatttatagcttatgtaaaattactctgacttcattttagcttttgttatagaaaaagcttatacataa 15119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 40759015 - 40758967
Alignment:
Q  64 caaaaagaatctaactttattttctcttttgttatagaaatagcttata 112  Q
    |||||| ||| | |||||||||| ||||||||||| |||||||||||||    
T  40759015 caaaaacaatttgactttattttatcttttgttatggaaatagcttata 40758967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 27555 - 27483
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||||||||| |||| ||||||||||||| |||||||||||  ||| | ||||||||  ||||||| ||||||    
T  27555 actttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagc 27483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 21346 - 21409
Alignment:
Q  54 acagcttatgcaaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||||||| | |||| ||| |||||||||||| ||||||  |||| |||||||||||||||||    
T  21346 acagcttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataa 21409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 8276 - 8305
Alignment:
Q  88 tcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||||||||||||||||||||    
T  8276 tcttttgttatagaaatagcttatacataa 8305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 117
Target Start/End: Original strand, 8200 - 8229
Alignment:
Q  88 tcttttgttatagaaatagcttatacataa 117  Q
    ||||||||||||||||||||||||||||||    
T  8200 tcttttgttatagaaatagcttatacataa 8229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 9866 - 9938
Alignment:
Q  77 actttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttatgcaataagc 149  Q
    |||| ||||| | |||||||||||||||| |||||||||||  ||  |||||||||||| |||| | ||||||    
T  9866 acttaattttattttttgttatagaaataacttatacataagcacctatatgataagcatttattctataagc 9938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 104213 - 104265
Alignment:
Q  65 aaaaagaatctaactttattttctcttttgttatagaaatagcttatacataa 117  Q
    ||||| ||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  104213 aaaaataatataacattattttattttttgttatagaaataacttatacataa 104265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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