View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9083_high_18 (Length: 329)

Name: NF9083_high_18
Description: NF9083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9083_high_18
NF9083_high_18
[»] chr1 (46 HSPs)
chr1 (12-312)||(25843984-25844285)
chr1 (12-312)||(10140320-10140626)
chr1 (12-312)||(16649198-16649504)
chr1 (18-312)||(26927283-26927583)
chr1 (75-312)||(10135617-10135858)
chr1 (12-279)||(39587962-39588234)
chr1 (18-312)||(47450789-47451087)
chr1 (132-312)||(51041073-51041254)
chr1 (12-312)||(19798564-19798880)
chr1 (88-312)||(33300808-33301038)
chr1 (12-286)||(40166208-40166495)
chr1 (147-312)||(38621072-38621238)
chr1 (43-312)||(39200325-39200602)
chr1 (12-285)||(16035835-16036128)
chr1 (15-118)||(38620923-38621026)
chr1 (242-312)||(3094528-3094597)
chr1 (43-114)||(11806596-11806667)
chr1 (199-292)||(28857700-28857796)
chr1 (262-312)||(7882466-7882516)
chr1 (199-292)||(24159458-24159554)
chr1 (246-292)||(33380566-33380612)
chr1 (240-293)||(2493458-2493511)
chr1 (243-312)||(16833937-16834005)
chr1 (12-68)||(8267647-8267703)
chr1 (199-290)||(9328104-9328198)
chr1 (202-293)||(25661483-25661576)
chr1 (205-304)||(28434204-28434306)
chr1 (201-292)||(31064319-31064413)
chr1 (196-302)||(17214038-17214144)
chr1 (247-293)||(19309246-19309292)
chr1 (12-116)||(33055260-33055365)
chr1 (240-293)||(9252738-9252791)
chr1 (199-293)||(23191658-23191755)
chr1 (15-116)||(3094314-3094414)
chr1 (12-54)||(28434399-28434441)
chr1 (242-302)||(12260456-12260515)
chr1 (12-68)||(41097769-41097825)
chr1 (199-305)||(8267427-8267535)
chr1 (235-286)||(9352954-9353005)
chr1 (10-53)||(16833710-16833753)
chr1 (262-312)||(23192391-23192441)
chr1 (12-59)||(51041283-51041330)
chr1 (199-292)||(27761478-27761573)
chr1 (12-116)||(18784325-18784429)
chr1 (12-49)||(33301010-33301047)
chr1 (247-303)||(18784149-18784205)
[»] chr7 (41 HSPs)
chr7 (12-312)||(4930461-4930754)
chr7 (12-312)||(42626152-42626458)
chr7 (12-311)||(8268522-8268826)
chr7 (12-304)||(44422708-44423004)
chr7 (46-302)||(26341467-26341731)
chr7 (12-242)||(13313867-13314104)
chr7 (12-201)||(12799638-12799840)
chr7 (12-302)||(30258328-30258624)
chr7 (12-305)||(10387923-10388234)
chr7 (12-118)||(27238470-27238576)
chr7 (12-117)||(21671423-21671528)
chr7 (16-118)||(3356857-3356959)
chr7 (12-117)||(3045783-3045888)
chr7 (156-293)||(21671573-21671709)
chr7 (245-310)||(2595288-2595353)
chr7 (242-312)||(12799849-12799918)
chr7 (156-302)||(26286716-26286864)
chr7 (199-302)||(16372814-16372920)
chr7 (199-300)||(6898029-6898134)
chr7 (12-68)||(27256464-27256520)
chr7 (199-293)||(25831989-25832086)
chr7 (20-101)||(15642413-15642495)
chr7 (15-116)||(44510440-44510541)
chr7 (147-293)||(3045935-3046084)
chr7 (243-302)||(3880443-3880502)
chr7 (12-116)||(9650731-9650836)
chr7 (12-53)||(3880223-3880264)
chr7 (12-89)||(13142691-13142768)
chr7 (12-116)||(19640520-19640624)
chr7 (249-302)||(19640747-19640800)
chr7 (242-302)||(4579961-4580021)
chr7 (201-293)||(29477894-29477993)
chr7 (202-280)||(45748261-45748342)
chr7 (147-189)||(3356770-3356812)
chr7 (200-289)||(9008554-9008643)
chr7 (199-299)||(27256630-27256732)
chr7 (12-53)||(40865185-40865226)
chr7 (156-192)||(2595251-2595287)
chr7 (13-53)||(8076268-8076308)
chr7 (14-115)||(23866293-23866394)
chr7 (247-299)||(40864963-40865015)
[»] chr4 (70 HSPs)
chr4 (12-312)||(5270986-5271290)
chr4 (12-312)||(31728954-31729258)
chr4 (12-302)||(37264137-37264431)
chr4 (12-302)||(19106836-19107133)
chr4 (13-311)||(51698145-51698451)
chr4 (12-302)||(31269262-31269547)
chr4 (12-302)||(31273749-31274036)
chr4 (12-311)||(19102205-19102511)
chr4 (12-302)||(37259437-37259744)
chr4 (12-312)||(5927780-5928086)
chr4 (18-312)||(8693945-8694246)
chr4 (12-312)||(13059637-13059940)
chr4 (72-312)||(31766160-31766404)
chr4 (12-312)||(16421257-16421572)
chr4 (12-312)||(32081689-32081999)
chr4 (147-312)||(19540743-19540910)
chr4 (12-186)||(47244476-47244655)
chr4 (12-302)||(12823462-12823768)
chr4 (147-299)||(55252029-55252184)
chr4 (147-300)||(6943148-6943303)
chr4 (12-126)||(31766038-31766152)
chr4 (147-293)||(13065383-13065531)
chr4 (12-117)||(15134380-15134486)
chr4 (12-117)||(6942996-6943101)
chr4 (199-292)||(16595606-16595702)
chr4 (12-105)||(39217184-39217278)
chr4 (205-293)||(1150948-1151039)
chr4 (25-118)||(13065578-13065670)
chr4 (147-293)||(23093482-23093629)
chr4 (12-81)||(19540959-19541028)
chr4 (12-117)||(40408430-40408535)
chr4 (199-292)||(20513468-20513564)
chr4 (12-116)||(31298157-31298261)
chr4 (240-293)||(33722560-33722613)
chr4 (12-116)||(47574880-47574984)
chr4 (243-311)||(48276223-48276291)
chr4 (12-68)||(3997874-3997930)
chr4 (46-117)||(4551233-4551305)
chr4 (12-68)||(7902923-7902979)
chr4 (12-68)||(34560648-34560704)
chr4 (261-312)||(32221119-32221170)
chr4 (18-116)||(52690891-52690990)
chr4 (199-285)||(55081346-55081435)
chr4 (243-312)||(8029907-8029975)
chr4 (243-312)||(19906703-19906771)
chr4 (243-312)||(33462928-33462996)
chr4 (243-312)||(33468568-33468636)
chr4 (262-302)||(47244625-47244665)
chr4 (12-116)||(13521756-13521861)
chr4 (199-293)||(15020105-15020202)
chr4 (147-226)||(40408582-40408660)
chr4 (242-300)||(15805214-15805272)
chr4 (199-300)||(42316204-42316307)
chr4 (12-53)||(8030302-8030343)
chr4 (12-53)||(33463182-33463223)
chr4 (201-241)||(16948384-16948424)
chr4 (260-312)||(19906614-19906666)
chr4 (260-312)||(48276328-48276380)
chr4 (30-116)||(23093347-23093434)
chr4 (246-293)||(40684499-40684546)
chr4 (187-302)||(2820199-2820319)
chr4 (209-286)||(3309586-3309666)
chr4 (199-275)||(20513521-20513600)
chr4 (247-300)||(39216677-39216730)
chr4 (240-293)||(39991566-39991619)
chr4 (12-53)||(48276475-48276516)
chr4 (240-292)||(2574975-2575027)
chr4 (247-299)||(3997660-3997712)
chr4 (247-299)||(34560866-34560918)
chr4 (12-68)||(39319796-39319852)
[»] chr2 (43 HSPs)
chr2 (12-302)||(9180300-9180595)
chr2 (12-302)||(25496896-25497193)
chr2 (12-312)||(25477859-25478165)
chr2 (22-312)||(31326987-31327284)
chr2 (18-302)||(1934566-1934854)
chr2 (18-312)||(18344656-18344956)
chr2 (12-312)||(12797153-12797458)
chr2 (132-302)||(9184991-9185161)
chr2 (20-312)||(19892035-19892325)
chr2 (94-312)||(17968525-17968748)
chr2 (12-241)||(28603531-28603762)
chr2 (12-113)||(9189573-9189674)
chr2 (12-293)||(40847171-40847466)
chr2 (199-292)||(14104952-14105048)
chr2 (12-118)||(17545060-17545166)
chr2 (203-293)||(13291114-13291207)
chr2 (146-279)||(7734953-7735090)
chr2 (145-292)||(38591572-38591726)
chr2 (243-302)||(42926215-42926274)
chr2 (201-290)||(10160330-10160421)
chr2 (199-288)||(30643516-30643607)
chr2 (243-300)||(30651380-30651438)
chr2 (243-312)||(7737426-7737494)
chr2 (249-293)||(17255013-17255057)
chr2 (22-116)||(28855236-28855330)
chr2 (247-305)||(17453175-17453233)
chr2 (37-114)||(19578180-19578258)
chr2 (15-68)||(6297703-6297756)
chr2 (10-114)||(10160495-10160599)
chr2 (12-53)||(17453413-17453454)
chr2 (156-240)||(30651399-30651481)
chr2 (147-186)||(17544975-17545014)
chr2 (199-312)||(19542181-19542297)
chr2 (243-300)||(29678220-29678278)
chr2 (12-54)||(30643411-30643453)
chr2 (199-299)||(6297491-6297593)
chr2 (12-53)||(29677995-29678036)
chr2 (12-53)||(30651156-30651197)
chr2 (248-293)||(44957184-44957229)
chr2 (260-312)||(29678131-29678183)
chr2 (12-115)||(30629078-30629181)
chr2 (12-40)||(35602145-35602173)
chr2 (202-293)||(38427026-38427119)
[»] chr3 (63 HSPs)
chr3 (12-312)||(14438262-14438566)
chr3 (12-312)||(27709158-27709462)
chr3 (12-312)||(757928-758235)
chr3 (13-302)||(23661037-23661330)
chr3 (13-302)||(24037944-24038237)
chr3 (12-312)||(18467451-18467757)
chr3 (13-312)||(23665687-23665989)
chr3 (12-302)||(55326002-55326298)
chr3 (12-312)||(7570780-7571085)
chr3 (14-312)||(29350468-29350772)
chr3 (12-296)||(2207325-2207616)
chr3 (12-312)||(18472233-18472539)
chr3 (18-312)||(39775290-39775589)
chr3 (12-241)||(55431541-55431775)
chr3 (12-312)||(46964241-46964543)
chr3 (44-240)||(32473554-32473754)
chr3 (13-312)||(3656793-3657106)
chr3 (21-312)||(3419229-3419520)
chr3 (12-116)||(25726553-25726658)
chr3 (147-288)||(17025689-17025833)
chr3 (12-118)||(10708438-10708544)
chr3 (147-293)||(12112248-12112395)
chr3 (12-118)||(20520280-20520386)
chr3 (156-293)||(25726356-25726496)
chr3 (242-312)||(3034082-3034151)
chr3 (242-312)||(3693057-3693126)
chr3 (242-312)||(8070117-8070186)
chr3 (242-312)||(8888369-8888438)
chr3 (147-300)||(11399729-11399884)
chr3 (199-293)||(48431939-48432036)
chr3 (242-312)||(3673025-3673094)
chr3 (241-292)||(4662571-4662622)
chr3 (242-312)||(8883609-8883678)
chr3 (199-300)||(10708276-10708380)
chr3 (10-68)||(10586000-10586058)
chr3 (43-118)||(12112442-12112518)
chr3 (246-302)||(12965460-12965516)
chr3 (248-292)||(16983375-16983419)
chr3 (12-68)||(45904355-45904411)
chr3 (12-68)||(45904811-45904867)
chr3 (200-290)||(18011734-18011827)
chr3 (262-312)||(20520438-20520487)
chr3 (12-116)||(8069900-8070003)
chr3 (12-116)||(8883391-8883495)
chr3 (202-300)||(35456536-35456636)
chr3 (15-116)||(3033868-3033968)
chr3 (12-53)||(8888151-8888192)
chr3 (22-117)||(19276682-19276779)
chr3 (15-116)||(3672810-3672911)
chr3 (15-116)||(3692842-3692943)
chr3 (12-64)||(31002918-31002970)
chr3 (203-293)||(20508043-20508135)
chr3 (251-305)||(28125576-28125630)
chr3 (251-305)||(53358545-53358599)
chr3 (260-313)||(12971311-12971364)
chr3 (153-186)||(20520435-20520468)
chr3 (242-290)||(6595963-6596011)
chr3 (247-299)||(10585788-10585840)
chr3 (21-57)||(12566303-12566339)
chr3 (21-57)||(13156223-13156259)
chr3 (21-57)||(13260706-13260742)
chr3 (203-290)||(19339727-19339817)
chr3 (247-299)||(45904144-45904196)
[»] chr5 (58 HSPs)
chr5 (12-302)||(7451982-7452277)
chr5 (12-312)||(37248364-37248671)
chr5 (12-312)||(29167535-29167840)
chr5 (12-312)||(40148123-40148429)
chr5 (15-312)||(37549714-37550017)
chr5 (12-312)||(26667500-26667806)
chr5 (12-312)||(26939097-26939403)
chr5 (12-312)||(36423865-36424171)
chr5 (14-312)||(37652512-37652816)
chr5 (12-302)||(12103253-12103550)
chr5 (14-312)||(36428939-36429243)
chr5 (12-312)||(35679451-35679743)
chr5 (88-302)||(9726326-9726546)
chr5 (12-168)||(10759527-10759688)
chr5 (12-117)||(20180825-20180930)
chr5 (147-301)||(6513488-6513643)
chr5 (147-241)||(15414503-15414597)
chr5 (199-300)||(23757387-23757491)
chr5 (199-300)||(23822843-23822947)
chr5 (240-312)||(557133-557204)
chr5 (240-312)||(561905-561976)
chr5 (12-116)||(16116011-16116115)
chr5 (148-238)||(16115871-16115962)
chr5 (12-113)||(15414647-15414749)
chr5 (242-312)||(36937097-36937166)
chr5 (242-312)||(36941851-36941920)
chr5 (43-118)||(6513689-6513762)
chr5 (24-118)||(34707299-34707393)
chr5 (12-68)||(13301299-13301355)
chr5 (21-119)||(7086595-7086693)
chr5 (199-276)||(18265158-18265238)
chr5 (243-300)||(39518861-39518919)
chr5 (243-300)||(39523500-39523558)
chr5 (12-116)||(556918-557021)
chr5 (12-116)||(561690-561793)
chr5 (12-116)||(41996883-41996986)
chr5 (12-116)||(42001652-42001755)
chr5 (199-290)||(12044744-12044837)
chr5 (17-69)||(12102639-12102691)
chr5 (207-302)||(23688521-23688618)
chr5 (12-68)||(31731765-31731821)
chr5 (18-116)||(3666139-3666237)
chr5 (15-116)||(36937280-36937380)
chr5 (15-116)||(36942034-36942134)
chr5 (12-116)||(12044907-12045011)
chr5 (12-53)||(32461380-32461421)
chr5 (156-240)||(39518880-39518962)
chr5 (156-240)||(39523519-39523601)
chr5 (12-116)||(6155181-6155286)
chr5 (12-53)||(1429827-1429868)
chr5 (243-312)||(4872364-4872432)
chr5 (199-299)||(13301089-13301189)
chr5 (240-293)||(15591007-15591060)
chr5 (12-53)||(21323798-21323839)
chr5 (242-299)||(32461144-32461201)
chr5 (12-53)||(39518637-39518678)
chr5 (12-53)||(39523276-39523317)
chr5 (12-40)||(12501738-12501766)
[»] chr6 (44 HSPs)
chr6 (12-312)||(16835722-16836027)
chr6 (12-312)||(6407425-6407728)
chr6 (12-312)||(11559780-11560088)
chr6 (12-305)||(17964127-17964426)
chr6 (12-297)||(25314031-25314324)
chr6 (12-297)||(26201525-26201818)
chr6 (12-312)||(11570308-11570616)
chr6 (12-312)||(11534270-11534578)
chr6 (12-302)||(12689199-12689496)
chr6 (12-208)||(11428237-11428436)
chr6 (12-305)||(4156924-4157236)
chr6 (12-312)||(2699658-2699974)
chr6 (165-312)||(33687211-33687360)
chr6 (18-293)||(19994977-19995264)
chr6 (149-300)||(22694883-22695036)
chr6 (12-118)||(5856235-5856341)
chr6 (12-117)||(12406115-12406220)
chr6 (205-293)||(20747883-20747974)
chr6 (20-118)||(11613527-11613624)
chr6 (24-108)||(29892032-29892116)
chr6 (249-312)||(11428427-11428490)
chr6 (155-293)||(17599742-17599883)
chr6 (147-285)||(5856383-5856523)
chr6 (155-229)||(12405987-12406060)
chr6 (199-302)||(22609958-22610068)
chr6 (30-114)||(22695088-22695172)
chr6 (14-116)||(6112724-6112826)
chr6 (199-293)||(14042005-14042102)
chr6 (240-293)||(35130031-35130084)
chr6 (155-219)||(11613411-11613474)
chr6 (12-68)||(17913825-17913881)
chr6 (242-289)||(5856533-5856580)
chr6 (243-302)||(17914051-17914110)
chr6 (243-312)||(14509435-14509503)
chr6 (199-290)||(2699626-2699720)
chr6 (12-56)||(22609797-22609841)
chr6 (89-125)||(33687394-33687430)
chr6 (247-302)||(24588776-24588831)
chr6 (199-281)||(32001774-32001859)
chr6 (262-312)||(14575063-14575113)
chr6 (12-53)||(8748005-8748046)
chr6 (12-68)||(14509212-14509269)
chr6 (22-54)||(2863224-2863256)
chr6 (240-292)||(5496272-5496324)
[»] scaffold0352 (1 HSPs)
scaffold0352 (12-312)||(7332-7638)
[»] chr8 (59 HSPs)
chr8 (12-302)||(36683807-36684104)
chr8 (12-302)||(44925494-44925791)
chr8 (12-289)||(33416774-33417057)
chr8 (22-302)||(1807685-1807969)
chr8 (12-312)||(15951115-15951422)
chr8 (12-302)||(18875961-18876256)
chr8 (12-312)||(38181807-38182123)
chr8 (12-312)||(19166862-19167178)
chr8 (18-305)||(17020572-17020876)
chr8 (18-305)||(17551009-17551313)
chr8 (12-312)||(1910519-1910836)
chr8 (156-293)||(26779492-26779631)
chr8 (12-118)||(28559427-28559532)
chr8 (12-300)||(23548190-23548497)
chr8 (12-118)||(28564582-28564687)
chr8 (12-118)||(28572205-28572310)
chr8 (157-300)||(22714566-22714712)
chr8 (144-293)||(18260199-18260353)
chr8 (156-300)||(24672898-24673042)
chr8 (147-239)||(2966014-2966106)
chr8 (242-302)||(31449460-31449520)
chr8 (199-292)||(19954634-19954730)
chr8 (243-312)||(4237927-4237995)
chr8 (243-312)||(4242666-4242734)
chr8 (20-116)||(24673097-24673194)
chr8 (199-292)||(2470337-2470433)
chr8 (12-118)||(2965858-2965964)
chr8 (156-222)||(28564461-28564527)
chr8 (17-117)||(17793696-17793797)
chr8 (243-308)||(17953542-17953607)
chr8 (201-292)||(19950182-19950276)
chr8 (156-310)||(15875261-15875416)
chr8 (199-292)||(4543931-4544026)
chr8 (145-312)||(7002013-7002184)
chr8 (12-68)||(25367797-25367853)
chr8 (243-300)||(17026390-17026448)
chr8 (243-300)||(17556882-17556940)
chr8 (18-112)||(26779333-26779429)
chr8 (243-292)||(40125479-40125528)
chr8 (12-117)||(31449633-31449738)
chr8 (12-68)||(34818516-34818572)
chr8 (15-116)||(4238110-4238210)
chr8 (15-116)||(4242849-4242949)
chr8 (207-292)||(5884382-5884470)
chr8 (158-231)||(17793852-17793926)
chr8 (247-300)||(2966099-2966152)
chr8 (20-68)||(8331174-8331222)
chr8 (170-222)||(28559282-28559334)
chr8 (156-196)||(28559333-28559373)
chr8 (156-196)||(28572110-28572150)
chr8 (12-68)||(37771933-37771989)
chr8 (199-290)||(43302293-43302386)
chr8 (12-53)||(17026163-17026204)
chr8 (156-240)||(17026409-17026491)
chr8 (12-53)||(17556655-17556696)
chr8 (156-240)||(17556901-17556983)
chr8 (199-299)||(37772099-37772201)
chr8 (12-53)||(40125712-40125753)
chr8 (201-241)||(27415926-27415966)
[»] scaffold0002 (5 HSPs)
scaffold0002 (12-312)||(443507-443813)
scaffold0002 (243-300)||(4526-4584)
scaffold0002 (12-53)||(4301-4342)
scaffold0002 (156-240)||(4545-4627)
scaffold0002 (21-57)||(150729-150765)
[»] scaffold0054 (2 HSPs)
scaffold0054 (18-312)||(25677-25987)
scaffold0054 (18-300)||(29393-29695)
[»] scaffold0009 (2 HSPs)
scaffold0009 (157-293)||(147972-148110)
scaffold0009 (15-118)||(148166-148270)
[»] scaffold0690 (2 HSPs)
scaffold0690 (147-241)||(5664-5757)
scaffold0690 (12-114)||(5513-5615)
[»] scaffold0018 (1 HSPs)
scaffold0018 (202-300)||(171342-171444)
[»] scaffold0240 (2 HSPs)
scaffold0240 (203-302)||(4395-4496)
scaffold0240 (18-69)||(4207-4259)
[»] scaffold0182 (2 HSPs)
scaffold0182 (242-312)||(9467-9536)
scaffold0182 (12-116)||(9650-9754)
[»] scaffold0037 (1 HSPs)
scaffold0037 (18-92)||(42184-42259)
[»] scaffold0128 (2 HSPs)
scaffold0128 (155-224)||(13601-13670)
scaffold0128 (21-57)||(13485-13521)
[»] scaffold0293 (1 HSPs)
scaffold0293 (17-92)||(3001-3077)
[»] scaffold0061 (1 HSPs)
scaffold0061 (12-68)||(46006-46062)
[»] scaffold0017 (1 HSPs)
scaffold0017 (12-68)||(152725-152781)
[»] scaffold0011 (1 HSPs)
scaffold0011 (243-312)||(145992-146061)
[»] scaffold0226 (1 HSPs)
scaffold0226 (249-293)||(5899-5943)
[»] scaffold0045 (2 HSPs)
scaffold0045 (201-311)||(83448-83560)
scaffold0045 (12-53)||(83286-83327)
[»] scaffold0060 (2 HSPs)
scaffold0060 (12-50)||(47692-47730)
scaffold0060 (12-68)||(52717-52773)
[»] scaffold0041 (1 HSPs)
scaffold0041 (14-68)||(35515-35569)


Alignment Details
Target: chr1 (Bit Score: 278; Significance: 1e-155; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 25843984 - 25844285
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25843984 tggtgttgagaccactcaaatatgatgctgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 25844083  T
Q  112 ccatttctcctcaaaa-atatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgat 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25844084 ccatttctcctcaaaaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgctattccaaatagggactatgat 25844183  T
Q  211 cttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25844184 cttaaaagtactctttatcctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 25844283  T
Q  311 tg 312  Q
    ||    
T  25844284 tg 25844285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 10140320 - 10140626
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  10140320 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacttcaatatgccactacgaccattcaaatattgtgatacca 10140419  T
Q  112 ccatttctcctca------aaaatatttgaaatactttttatatata--ccgttaagatcattcttaattccgacgggacattgttattccaaataggga 203  Q
    |||||||||||||      |||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10140420 ccatttctcctcacatagaaaaatatt-gaaatactttttatatatatactgttaagatcattcttaattccgacgggacattgttattccaaataggga 10140518  T
Q  204 ctatgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10140519 ctatgatcttaaaagtactctttattatgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaa 10140617  T
Q  304 gggactatg 312  Q
    |||||||||    
T  10140618 gggactatg 10140626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 16649504 - 16649198
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  16649504 tggtgttgaaaccactcaaatatggtgttaccacgattctaactttaatttctccaaaacatcaatatgagactacgaccactcaaatatggtgatacca 16649405  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  16649404 ccatttctcctcaaatggaaaaatattgaaatactttttatatataccgttaaaatcattcttaatttcgacgggacattgttattccaaataaggacta 16649305  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    ||||||||||| |||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  16649304 tgatcttaaaaatactctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaatttcgaagggacattaaaccg-aaaa 16649207  T
Q  304 gggactatg 312  Q
    |||||||||    
T  16649206 gggactatg 16649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 312
Target Start/End: Complemental strand, 26927583 - 26927283
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||    
T  26927583 tgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgataccaccattt 26927484  T
Q  118 ctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatct 212  Q
    |||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26927483 ctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacggaacattgttattccaaatagggactatgatct 26927384  T
Q  213 taaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggact 309  Q
    ||||| |||||||||||||||||||||||   ||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  26927383 taaaaatactctttattctgaagggacatatattatcgaagggactatg-ttgtaagaccattcttaattccaaagggatattaaaccg-aaaagggact 26927286  T
Q  310 atg 312  Q
    |||    
T  26927285 atg 26927283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 75 - 312
Target Start/End: Original strand, 10135617 - 10135858
Alignment:
Q  75 aatatggcactacgaccattcaaatatggtgataccaccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattctt 169  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||    || || |||||||||||||||||||||| |||||||||||||||    
T  10135617 aatatggcactacgaccactcaaatatggcgataccaccatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaagatcattctt 10135716  T
Q  170 aattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagacc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10135717 aattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattatgaagggacatttatcgaagggactatgtttttaagacc 10135816  T
Q  270 attcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  10135817 attcttaattccgaagggacattaaaccg-aaaagggactatg 10135858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 12 - 279
Target Start/End: Complemental strand, 39588234 - 39587962
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||| ||||    
T  39588234 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgacacca 39588135  T
Q  112 ccatttctcctcaa----aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    ||||||||||||||    ||| || | ||||| | ||||||||  ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  39588134 ccatttctcctcaattagaaaaatataaaataatatttatata--ccgttaagaccattcttaatttcgacgggacattgtcattccaaatagggactat 39588037  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaatt 279  Q
    ||||||||||||| ||||||||| || |||||||   |||||||||||||| |||||||||||||||| ||||||    
T  39588036 gatcttaaaagtattctttattccgatgggacatatattatcgaagggactgtgtttttaagaccatttttaatt 39587962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 312
Target Start/End: Complemental strand, 47451087 - 47450789
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||| | ||  | ||||||||||||||| |||||||||  |||||||||  | ||| |||| |||||||||| ||||||| |||||    
T  47451087 tgagaccactcaaatatgatattaactccattctaactttaagttctccaaactatcaatatgatattacaaccactcaaatatggcgataccatcattt 47450988  T
Q  118 ctcctcaa----aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatctt 213  Q
    ||||||||    |||  | | ||||| | ||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47450987 ctcctcaattagaaaactataaaataatatttatata--ccattaagatcattcttaattccgacgggacattgttattccaaatagggactatgatctt 47450890  T
Q  214 aaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 310  Q
    ||||||||||||||||| ||||||||||   ||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||    
T  47450889 aaaagtactctttattccgaagggacatatattatcgaagagactatgtttttaagaccattcttaattttgaaggggcattaaaccg-aaaagggacta 47450791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 132 - 312
Target Start/End: Complemental strand, 51041254 - 51041073
Alignment:
Q  132 ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattct 231  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51041254 ttgaaatactttttatatatatcgttaagatcattcttaattccgatgggacattgttattccaaatagggactatgatcttaaaagtactctttattct 51041155  T
Q  232 gaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
     |||| ||||   ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  51041154 aaaggaacatatattatcgaagggactatg-ttttaagaccattcttaattctgaagggacattaaaccg-aaaagggactatg 51041073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 19798880 - 19798564
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||| ||||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19798880 tggtgctgagacaactcaaatatggtgttacccccattctaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatggtgatacca 19798781  T
Q  112 ccatttc--------------tcctcaa--aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcca 195  Q
    |||||||              |||||||  |||   |||||| | | ||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  19798780 ccatttccactttttaatttctcctcaattaaagtattgaaagaatatttatata--ccgttaagatcattcttaattccgacgggacattattattcca 19798683  T
Q  196 aatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    || ||||||||||||||| | |||||||||||||| |||||||| |   |||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  19798682 aaaagggactatgatcttcatagtactctttattccgaagggacttatattatcgaagggattatgttttgaagaccattcttaatttcgaagggacatt 19798583  T
Q  293 aaaccgaaaaagggactatg 312  Q
    ||| | ||||||||||||||    
T  19798582 aaatc-aaaaagggactatg 19798564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 88 - 312
Target Start/End: Complemental strand, 33301038 - 33300808
Alignment:
Q  88 gaccattcaaatatggtgataccaccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacggga 182  Q
    ||||| |||||||||||| ||||||||||||||||||||    ||||| |||||||| |||||||||| ||| ||||||| ||| |||||| ||||||||    
T  33301038 gaccactcaaatatggtgttaccaccatttctcctcaaatagaaatatattgaaataatttttatata-acc-ttaagattatttttaatttcgacggga 33300941  T
Q  183 cattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaatt 279  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||| |||||| ||    
T  33300940 cattgttatttcaaatagggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccgttcttagtt 33300841  T
Q  280 ccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||||||||||| ||||||| ||||||    
T  33300840 ccgaagggacattaaaccaaaaaaggaactatg 33300808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 286
Target Start/End: Original strand, 40166208 - 40166495
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  40166208 tggtattgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatggtgatacca 40166307  T
Q  112 c------------catttctcctca---aaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaa 196  Q
    |             |||||||||||   |||||| |||||| | | ||  ||||||| |||||||||||||||||||| ||||| ||||| ||||| |||    
T  40166308 ctttccactttttaatttctcctcaattaaaata-ttgaaagaatatt--tatatactgttaagatcattcttaattcagacggaacattattatttcaa 40166404  T
Q  197 atagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagg 286  Q
    | ||||||||||||||||| |||||| ||||||| |||||||| |   ||||| |||||||||||||||||||||||||||||||||||||||    
T  40166405 a-agggactatgatcttaatagtact-tttattccgaagggacttatattatcaaagggactatgtttttaagaccattcttaattccgaagg 40166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 147 - 312
Target Start/End: Original strand, 38621072 - 38621238
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||| ||||||||| |||||||| |   ||    
T  38621072 tatataccgttaagatcattcttaattccgacgggacattattatttcaaa-agggactatgatcttaatagtaatctttattccgaagggacttatatt 38621170  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||| |||||||||||||||||||| |||| ||||||| |||||||||||||| || |||||||||||||    
T  38621171 atcaaagggactatgtttttaagagcattattaattctgaagggacattaaaacg-aaaagggactatg 38621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 39200602 - 39200325
Alignment:
Q  43 caccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc--------------atttctcctcaa--a 126  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||| || ||||||||||||||||||||              ||||||||||||  |    
T  39200602 caccattctaactttaatttctccaaagtatcaatatggcattacgatcactcaaatatggtgataccaccgtttccactttttaatttctcctcaatta 39200503  T
Q  127 aatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactcttt 226  Q
    ||   |||||| | | ||||||||  || ||||||||||||       |||||||||||| |||||||||| |||||| |||||||||| ||||||||||    
T  39200502 aagtattgaaagaatatttatata--cctttaagatcattc-------cgacgggacattattattccaaa-agggacaatgatcttaatagtactcttt 39200413  T
Q  227 attctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||  |||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39200412 atttcgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc-aaaaagggactatg 39200325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 285
Target Start/End: Original strand, 16035835 - 16036128
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  16035835 tggtgctgagaccactcaaatatggtgttatcaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 16035934  T
Q  112 ccatt--------------tctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttatt 192  Q
    |||||              ||||||||||    || || |||||| | | ||||||||  |  ||||||||||||||||||| || |||||||| || ||    
T  16035935 ccatttcaaattttttatttctcctcaaatagaaaaatattgaaagaatatttatata--ctattaagatcattcttaattcggaagggacattattgtt 16036032  T
Q  193 ccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaag 285  Q
    || || || ||||||||||||||||||||||||||||  ||||||||||   || ||||| |||||||||||| |||||| || |||||| |||||    
T  16036033 ccgaaaagagactatgatcttaaaagtactctttatttcgaagggacatacattctcgaatggactatgttttcaagacctttattaattgcgaag 16036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 38620923 - 38621026
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacca 114  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||| || ||    
T  38620923 tgttaagaccactcaaatatggtgttttcaccattctaactttaatttctccaaaatatcaatatggcactacgatcactcaaatatggtaataacaaca 38621022  T
Q  115 tttc 118  Q
    ||||    
T  38621023 tttc 38621026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 3094528 - 3094597
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  3094528 ttatcgaagggactatgctgttaagaccattcttaatttcgaagggacattaaaccg-aaaagggactatg 3094597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 11806596 - 11806667
Alignment:
Q  43 caccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacca 114  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  11806596 caccattataactttaagttctccaaaatatcaatatggcactacgaccactcaaatacagtgataccacca 11806667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 28857796 - 28857700
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||| | |||||||  ||||||||||||    |||| ||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  28857796 agggactatgatcttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattcttaattctgaatggacatt 28857700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 7882466 - 7882516
Alignment:
Q  262 ttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7882466 ttaagaccattcttaattctgaagggacattataccgaaaaagggactatg 7882516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 24159554 - 24159458
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||  ||||||| | |||||||  ||||||||||||    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24159554 agggactaatatcttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccgttcttaattccgaagggacatt 24159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 33380612 - 33380566
Alignment:
Q  246 cgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  33380612 cgaagggactatgttcttaagaccattcttaattccgaagggacatt 33380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 2493511 - 2493458
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  2493511 atttaccgaagggactatgctcttaagaccattcttaattccgaagggacatta 2493458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 16833937 - 16834005
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  16833937 tatcgaagggactatgaacttaagaccattcttaattccgaagggacattaaatcg-gaaagggactatg 16834005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 8267703 - 8267647
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  8267703 tggtgttgagaccactcaaatatgttgttatcaccattctaattttaacttctccaa 8267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 9328198 - 9328104
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaa---gggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    ||||||||||||||||| |||||||||  ||  |||   |||| ||||| | ||||||||||||| |||||||||||||||||| ||||||||||    
T  9328198 agggactatgatcttaatagtactcttattttcgaaagggggaaatttaccaaagggactatgttcttaagaccattcttaatttcgaagggaca 9328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 25661576 - 25661483
Alignment:
Q  202 gactatgatcttaaaagtactctttattctgaagggac---atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||| | ||||||   ||||||||||||   ||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  25661576 gactatgatcttaagaatactctaatttctgaagggacgaaatttacc-aagggacaatgttcttaagaccattcttaattccgaagggacatta 25661483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 28434306 - 28434204
Alignment:
Q  205 tatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaa 301  Q
    |||||||||| || || ||||||||  |||| |||||   |||||||| |||||||| |||||||||||||||||||| |||||||| |||| ||| |||    
T  28434306 tatgatcttacaaatattctttatttcgaagagacatatattatcgaatggactatgcttttaagaccattcttaatttcgaagggagattataccaaaa 28434207  T
Q  302 aag 304  Q
    |||    
T  28434206 aag 28434204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 31064319 - 31064413
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||| | || ||||  ||| ||||||||    |||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  31064319 ggactatgatcttaagaatagtcttatttcagaagggactaattttaccgaagggactatgttcttaagaccattctcaattccgaagggacatt 31064413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 17214144 - 17214038
Alignment:
Q  196 aatagggactatgatcttaaaagtactctttattctgaagggacattta-tcgaagggactatgtttttaagaccattcttaattccgaagggacattaa 294  Q
    |||||||||||||||||||||| || | |||||||| ||| ||||  || | |||| ||||||| | ||||||||||||||| ||||||| ||||| |||    
T  17214144 aatagggactatgatcttaaaa-tattatttattctaaagagacaaataattgaagtgactatgctgttaagaccattcttagttccgaaaggacaataa 17214046  T
Q  295 accgaaaa 302  Q
    ||||||||    
T  17214045 accgaaaa 17214038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 19309292 - 19309246
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19309292 gaagggactatgttcttaagaccattattaattccgaagggacatta 19309246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 33055260 - 33055365
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaacttt-aatttctccaaaacatcaatatggcacta-cgaccattcaaatatggtgatac 109  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| || |||||||||  |||||||| | |||  | |||| |||||||||||| |||    
T  33055260 tggtgttgagaccactcaaatatggtgttatcaccattctaatttttaacttctccaaat-atcaatatcgtactttcaaccactcaaatatggtgctac 33055358  T
Q  110 caccatt 116  Q
     ||||||    
T  33055359 gaccatt 33055365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 9252738 - 9252791
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  9252738 atttaccgaagggactatgttcttaagactattcttaattccgaacggacatta 9252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 23191755 - 23191658
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||||||| | |||||||  || | ||||||||   |||| ||||| ||||||| | || |||| ||||||||||||||||||||||||    
T  23191755 agggactatgatcttaagaatactcttatttttaaagggacaaaatttaccgaagagactatgatattgagactattcttaattccgaagggacatta 23191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 3094314 - 3094414
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  3094314 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgacc 3094411  T
Q  114 att 116  Q
    |||    
T  3094412 att 3094414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 28434441 - 28434399
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac 54  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  28434441 tggtgttgagaccactcaaatatggtgttaccaccattctaac 28434399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 12260456 - 12260515
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||  |||| |||||||||||| |||||||| |||||||||||| ||||||||    
T  12260456 ttatcgaagggt-tatgcttttaagaccatccttaattctgaagggacattataccgaaaa 12260515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 41097825 - 41097769
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    ||||||||||||||| |||||||||| ||  ||||||||||| ||||| ||||||||    
T  41097825 tggtgttgagaccacgcaaatatggtattaccaccattctaattttaacttctccaa 41097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 8267535 - 8267427
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||| |||||||||||| || | |||||||| ||| |||||   | || |||||||||||| | ||||||||||||||| || |||| ||||| ||||    
T  8267535 agggaccatgatcttaaaa-taatatttattctaaagagacatgaataattgaagggactatgctcttaagaccattcttattttcgaaaggacaataaa 8267437  T
Q  296 ccgaaaaagg 305  Q
    ||||| ||||    
T  8267436 ccgaataagg 8267427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 9353005 - 9352954
Alignment:
Q  235 gggacatttatcgaagggactatgtttttaagaccattcttaattccgaagg 286  Q
    |||| ||||| | ||||||||||||| |||||||||||||||||| ||||||    
T  9353005 gggaaatttaccaaagggactatgttcttaagaccattcttaatttcgaagg 9352954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 16833710 - 16833753
Alignment:
Q  10 tttggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||||||||| |||||||||||||||||||  |||||||||||    
T  16833710 tttggtgttgaaaccactcaaatatggtgttaccaccattctaa 16833753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 23192441 - 23192391
Alignment:
Q  262 ttaagaccattcttaattccgaagggacatt-aaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  23192441 ttaagaccattcttaattccgaatggacatttaaaccgaaaa-gggactatg 23192391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 51041330 - 51041283
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaa 59  Q
    |||||||||||||||||||||||||||||   | ||||||||||||||    
T  51041330 tggtgttgagaccactcaaatatggtgttaatatcattctaactttaa 51041283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 27761573 - 27761478
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||| |  ||||||  || |||||||||    |||| |||||||||||| || |||||||||||||| |||| |||||||||||    
T  27761573 agggactatgatcttaagaacactcttatttttgaagggacgaattttaccgaagggactattttcttaagaccattctt-attctgaagggacatt 27761478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 18784429 - 18784325
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||| |||||||||||||||| |||||||  |||||||||||  ||||| |||| | ||| |||||||||| | | | |||| |||||||||||| |||     
T  18784429 tggtattgagaccactcaaatctggtgttaccaccattctaatttttaacttcttc-aaatatcaatatggtatttcaaccactcaaatatggtgctacg 18784331  T
Q  111 accatt 116  Q
    ||||||    
T  18784330 accatt 18784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 33301047 - 33301010
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccatt 49  Q
    |||||||||||||||||||||||||||||  |||||||    
T  33301047 tggtgttgagaccactcaaatatggtgttaccaccatt 33301010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 18784205 - 18784149
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||| | |||||||||||||| |||||||| | ||| || |||||||||    
T  18784205 gaagggactatgctcttaagaccattcttgattccgaatgaacaatataccgaaaaa 18784149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 4930461 - 4930754
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4930461 tggtgttgagaccactcaaatatggtgctgtcaccattctaactttaatttctccaaaacattaatatggcactacgaccattcaaatatggtgatacca 4930560  T
Q  112 ccatttctcctcaaaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatc 211  Q
    ||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4930561 ccatttctcctcaaata-------aatactttttatatataccgttaagatcattcttaattctgacgggacattgttattccaaatagggactatgatc 4930653  T
Q  212 ttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactat 311  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4930654 ttaaaagtactctttatcctgaagagacatttatcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactat 4930753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 42626458 - 42626152
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  42626458 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacattaatatggcactacaaccactcaaatatggtgatacca 42626359  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42626358 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggaata 42626259  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  42626258 tgatcttaaaagtactctttattctgaagggacatatattattgaagggactatg-ttttaagaccattcttaattccggagggacattaaaccg-aaaa 42626161  T
Q  304 gggactatg 312  Q
    |||||||||    
T  42626160 gggactatg 42626152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 8268522 - 8268826
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||  ||| |||||| |||||||||||||||||||||||||||||    
T  8268522 tggtgttgagaccactcaaatatgttgttaacaccattctaactttaagttctccaaactatctatatggtactacgaccattcaaatatggtgatacca 8268621  T
Q  112 ccatttctcctcaa----aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||| |||||||||    ||| || |  |||| | ||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8268622 ccatatctcctcaattagaaaaatatagaataatatttata--taccgttaagatcattcttaattccgacgagacattgttattccaaatagggactat 8268719  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    ||||||||||||||||||||||| ||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8268720 gatcttaaaagtactctttattccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 8268819  T
Q  305 ggactat 311  Q
    |||||||    
T  8268820 ggactat 8268826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 304
Target Start/End: Complemental strand, 44423004 - 44422708
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  44423004 tggtgttgaaaccaatcaaatatggtgttgtcacaattctaactttaatttctccaaaacatcaatgtggcactacgaccactcaaatatggtgatacca 44422905  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatact--ttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggac 204  Q
    |||||||||||||||    || || ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  44422904 ccatttctcctcaaatagaaaaatattgaaatactttttttatatataccgttaagatcattcttaattccgacaggacattgttagtccaaatagggac 44422805  T
Q  205 tatgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||| | |||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  44422804 tatgatcttaaaagtactctttattctgaagggaca--tattgaatgaactatg-ttttacgaccattcttaattccgaagggacattaaacggaaaaag 44422708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 46 - 302
Target Start/End: Original strand, 26341467 - 26341731
Alignment:
Q  46 cattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttctcctcaaa-----aatat-ttgaaata 139  Q
    |||||||||||||| |||||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||||||||     || || ||||||||    
T  26341467 cattctaactttaagttctccaaactatcaatatggtactccgaccactcaaatatggtgataccaccatttctcctcaaataaaaaaaatattgaaata 26341566  T
Q  140 ctttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggac 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26341567 ctttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtattctttattctgaagggac 26341666  T
Q  240 at---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||   |||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26341667 atatattatcacagggactat-attttaagaccattcttaattccgaagggacattaaaccgaaaa 26341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 13314104 - 13313867
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  13314104 tggtgttgagaccactcaaatattgtgttaccactattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgacacca 13314005  T
Q  112 c--catttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggac 204  Q
    |  ||||||||||||||    || || || ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  13314004 caccatttctcctcaaatagaaaaatattaaaataatttttttatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggtc 13313905  T
Q  205 tatgatcttaaaagtactctttattctgaagggacatt 242  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  13313904 tatgatcttaaaagtactctttattccaaagggacatt 13313867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 12799638 - 12799840
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaa--------tatggcactacgaccattcaaatatgg 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||        |||||||||||||||| ||||||||||    
T  12799638 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaatatcaatatagcactatggcactacgaccactcaaatatgg 12799737  T
Q  104 tgataccaccatttctcctca-----aaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaat 198  Q
    |||||||||||||||||||||     ||||   ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  12799738 tgataccaccatttctcctcaaatagaaaaacattgaaatactttttatatataccattaagatcattcttaatttcgacgggacattgttattccaaat 12799837  T
Q  199 agg 201  Q
    |||    
T  12799838 agg 12799840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 30258328 - 30258624
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||  |||  ||||||||||||||||||||| ||||||||| | ||||||    
T  30258328 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatttctttaaagtatcaatatggcactacgaccactcaaatatgataatacca 30258427  T
Q  112 ccatttctcctcaaaaatatttg---aaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    |||||||   |    ||| | |    || ||   | | ||||||| |||||||||||| |||||| |||||||||||| ||||| |||| ||||||||||    
T  30258428 ccatttccaatttttaatttctcctcaattaaaatatttatatacagttaagatcattattaatttcgacgggacattattatttcaaaaagggactatg 30258527  T
Q  209 atcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||| ||||| ||| ||| ||||||||| |   |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||    
T  30258528 atcttaatagtacccttgattttgaagggacttatattatcgaagggactgtgttttttataccattcttaattccgaagggacattaaacccaaaa 30258624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 10388234 - 10387923
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||||||||||||||| |||||||  ||| | | |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  10388234 tggtgctgagaccactcaaat-tggtgttaccacaactttaactttaatttctccaaaatatcaatatggcactacgatcactcaaatatggtgatacca 10388136  T
Q  112 ccatt--------------tctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttatt 192  Q
    |||||              |||||||||    ||| || |||||| | | ||||||||  |||||||||||||||| |||||||| | |||||| || ||    
T  10388135 ccatttcgactttttaatttctcctcaattagaaaaatattgaaagaatatttatata--ccgttaagatcattctcaattccgatgagacattattgtt 10388038  T
Q  193 ccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggac 289  Q
    ||||| |||||||||  ||||||||||||| |||||||||||||| |||   ||||||| |  ||||||||||||||||  |||||||||||||||||||    
T  10388037 ccaaa-agggactatattcttaaaagtactttttattctgaaggggcatacattatcgacgaaactatgtttttaagacttttcttaattccgaagggac 10387939  T
Q  290 attaaaccgaaaaagg 305  Q
    |||| |||||| ||||    
T  10387938 attataccgaataagg 10387923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 27238470 - 27238576
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  27238470 tggtgctgagaccactcaaatatggtgttaccaccattctaattgtaatttctccaaaatatcaatatggcactacgaccactcaaatatggtgatacca 27238569  T
Q  112 ccatttc 118  Q
    |||||||    
T  27238570 ccatttc 27238576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 21671423 - 21671528
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||  ||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  21671423 tggtgttgagataactcaaatatggtgttaccaccattataactttaatttttccaaaatatcaatatgacactacgaccactcaaatatggtgatacca 21671522  T
Q  112 ccattt 117  Q
    ||||||    
T  21671523 ccattt 21671528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 3356959 - 3356857
Alignment:
Q  16 gttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccat 115  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||| |||||||||  ||||||| || |||||||||| ||||||||||||||||||||||    
T  3356959 gttgagaccactcaaatatggtgttatcacaattctaactgtaagttctccaaactatcaatacggtactacgaccaatcaaatatggtgataccaccat 3356860  T
Q  116 ttc 118  Q
    |||    
T  3356859 ttc 3356857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 3045783 - 3045888
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| || || |||| ||||||||| ||||||||||| |||||||||||||||| |    
T  3045783 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaagttttctaaaatatcaatatgacactacgaccactcaaatatggtgatacta 3045882  T
Q  112 ccattt 117  Q
    ||||||    
T  3045883 ccattt 3045888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 21671573 - 21671709
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat-ttatcgaagggac 254  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| |||||| ||||||||||||||||||||||||| ||||||||||  | | |||||||     
T  21671573 ttaagatcattcttaattccgacggaacattattatttcaaa-agggaccatgatcttaaaagtactctttattccgaagggacatacttttgaagggat 21671671  T
Q  255 tatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||| |||||||| | ||||||||||| || ||||||||    
T  21671672 tatg-ttttaagatctttcttaattccaaatggacatta 21671709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 2595288 - 2595353
Alignment:
Q  245 tcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 310  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2595288 tcgaatggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 2595353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 12799849 - 12799918
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12799849 ttatcgaatggactatgtttt-aagaccattcttaatttcgaagggacattaaaccgaaaaagggactatg 12799918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 302
Target Start/End: Complemental strand, 26286864 - 26286716
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattcc--aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaag 250  Q
    |||||||||||| |||||| || ||||||||   |||||  ||| ||| ||||||||||||||| || ||||||||| |||||||  |   ||||||||     
T  26286864 ttaagatcattcataattctgaagggacatt---attcctgaaaaaggaactatgatcttaaaaatattctttattccgaagggatgtatattatcgaat 26286768  T
Q  251 ggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    | | |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26286767 gaaatatgcttttaagaccattcttaattccgaagggacattataccgaaaa 26286716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 16372814 - 16372920
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacatt----tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaa 294  Q
    ||||||||||||||||||  || | ||||||| ||||||||||     |||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  16372814 agggactatgatcttaaac-tattatttattccgaagggacataaaaatatcgaagggactatgttcttaagaccattcttaattccgaagggacattat 16372912  T
Q  295 accgaaaa 302  Q
    ||| ||||    
T  16372913 accaaaaa 16372920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 6898134 - 6898029
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaa 294  Q
    ||||||||||||||||| | |||||||  || |||||| ||    |||| ||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  6898134 agggactatgatcttaagaatactcttatttatgaaggaacgaattttaccgaagggactatgttcttaagaccattcttaattccgaagagacatttaa 6898035  T
Q  295 accgaa 300  Q
    ||||||    
T  6898034 accgaa 6898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 27256464 - 27256520
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  27256464 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 27256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 25832086 - 25831989
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||||||| | |||||||  ||  |||||||||   ||||  |||| |||||||||||||||||||||||||||||| |||| ||||||    
T  25832086 agggactatgatcttaagaatactcttattttcgaagggacaaaatttactgaagtgactatgtttttaagaccattcttaattccaaaggaacatta 25831989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 15642413 - 15642495
Alignment:
Q  20 agaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatat 101  Q
    |||||| ||| ||||||| || |||||||||||| |||||| |||||||||| ||||| |||| |||||||||| ||||||||    
T  15642413 agaccattcagatatggtattatcaccattctaacctttaagttctccaaaatatcaagatggtactacgaccactcaaatat 15642495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 44510541 - 44510440
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| ||| |||    
T  44510541 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgctacgacc 44510443  T
Q  114 att 116  Q
    |||    
T  44510442 att 44510440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 3045935 - 3046084
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    |||||||  ||||||||||| ||||||||| | ||| ||| || ||||||| ||||||| | ||||| || || || ||||||| ||||||||||   ||    
T  3045935 tatatactattaagatcattattaattccgtcaggatattattgttccaaa-agggactgtaatcttgaatgttctttttattccgaagggacatacatt 3046033  T
Q  244 atcgaagggactatgtttttaagac-cattcttaattccgaagggacatta 293  Q
    | ||||| |||||||||||||||||   ||||||||| | |||||||||||    
T  3046034 accgaagagactatgtttttaagacattttcttaatttcaaagggacatta 3046084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 3880443 - 3880502
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||   |||||||||||| ||||| |||||| |||||||||||||||    
T  3880443 tatcgaagggactatgaacttaagaccattcataatttcgaaggaacattaaaccgaaaa 3880502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 9650836 - 9650731
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||| ||||  |||||||||||   ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| |||    
T  9650836 tggtgttgagaccactcaaatatgatgttaccaccattctaattttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgttac 9650738  T
Q  110 caccatt 116  Q
     ||||||    
T  9650737 gaccatt 9650731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 3880223 - 3880264
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  3880223 tggtgctgagaccactcaaatatggtgttatcaccattctaa 3880264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 13142768 - 13142691
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacga 89  Q
    ||||| |||||||||| ||||||||||||  |||||||||  ||| || |||| ||||| |||||||||| |||||||    
T  13142768 tggtgctgagaccacttaaatatggtgttaccaccattctttcttcaagttctacaaaatatcaatatggaactacga 13142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 19640520 - 19640624
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    ||||| |||||||||| ||||||||||||  |||||||||||  ||||| |||||| ||| |||||||||  ||| | |||| |||||||||||| |||     
T  19640520 tggtgctgagaccactaaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaatatgatacttcaaccactcaaatatggtgctacg 19640618  T
Q  111 accatt 116  Q
    ||||||    
T  19640619 accatt 19640624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 19640747 - 19640800
Alignment:
Q  249 agggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  19640747 agggactatgtttttaagaccattcttagttttgaaaggacaataaaccgaaaa 19640800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 4579961 - 4580021
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||| | |||| |||||||||||||| |||  ||||||| ||||||||    
T  4579961 ttatcgaagggactatgctcttaaaaccattcttaattctgaaatgacattataccgaaaa 4580021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 29477993 - 29477894
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggac---atttatcgaagggac----tatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||| ||||||||| | || ||||| ||||||||||||   ||||| | |||||||    |||||| ||||||||||||||||||||||||||| ||||    
T  29477993 ggactttgatcttaagaatattcttttttctgaagggacaaaatttaccaaagggactatatatgttcttaagaccattcttaattccgaagggatatta 29477894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 45748342 - 45748261
Alignment:
Q  202 gactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattc 280  Q
    |||| ||||||||||| |||||||||||| |||| |||||   ||||| ||  |||||| ||||||||| ||||||||||||    
T  45748342 gactttgatcttaaaaatactctttattccgaagagacatatattatcaaattgactatatttttaagatcattcttaattc 45748261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 3356812 - 3356770
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgtt 189  Q
    ||||||| ||||||||||||||||||||||||| || ||||||    
T  3356812 tatatacggttaagatcattcttaattccgacgagatattgtt 3356770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 9008554 - 9008643
Alignment:
Q  200 gggactatgatcttaaaagtactctttattctgaagggacatttatc-gaagggactatgtttttaagaccattcttaattccgaagggac 289  Q
    |||||||||||||||||| || | |||||||| ||| ||||  || | |||||||||||| | |||||||||||||| ||| |||||||||    
T  9008554 gggactatgatcttaaaa-tattatttattctaaagagacaaataactgaagggactatgctcttaagaccattcttgatttcgaagggac 9008643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 299
Target Start/End: Original strand, 27256630 - 27256732
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||| |||||||||||| || | |||||||| ||| |||||   | || |||||||||||| | ||||||||||||||| ||||||| ||| | ||||    
T  27256630 agggaccatgatcttaaaa-tattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaa 27256728  T
Q  296 ccga 299  Q
    ||||    
T  27256729 ccga 27256732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 40865226 - 40865185
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||||| |||||||||||||||||||||  |||||||||||    
T  40865226 tggtgttaagaccactcaaatatggtgttaccaccattctaa 40865185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 2595251 - 2595287
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttatt 192  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  2595251 ttaagatcattcttaatttcgacgtgacattgttatt 2595287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 8076268 - 8076308
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  8076268 ggtgttgagaccactcaaatatggtgttaccaccgttctaa 8076308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 23866293 - 23866394
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||| ||||||||||||  |||||||||||   ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| ||| |    
T  23866293 gtgttgagaccact-aaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgttacga 23866390  T
Q  112 ccat 115  Q
    ||||    
T  23866391 ccat 23866394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 40865015 - 40864963
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||||    
T  40865015 gaagggactatgctcttaagaccattcttatttccgaaaggataataaaccga 40864963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 5271290 - 5270986
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  5271290 tggtgttcagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacttcaatatggcactacgaccactcaaatatggtgatacca 5271191  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||| ||||    || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271190 ccatttctccacaaatagaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 5271091  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5271090 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaaggg 5270992  T
Q  307 actatg 312  Q
    ||||||    
T  5270991 actatg 5270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 31729258 - 31728954
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  31729258 tggtgttgagaccactcaaatatggtgttgcaaccattctaactttaatttctccaaaacttcaatatggcactacgaccactcaaatatggtgatacca 31729159  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31729158 ccatttctcctcaaatagaaaaatattgatatactttttatatatactgataagatcattcttaattccgacgggacattgttattccaaatagggacta 31729059  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  31729058 tgatcttaaaagtactttttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattcagaagggacattaaaccg-aaaaggg 31728960  T
Q  307 actatg 312  Q
    ||||||    
T  31728959 actatg 31728954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 37264431 - 37264137
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| ||||| |||| ||||||||||||||||||    
T  37264431 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacaaccactcaaatatggtgatacca 37264332  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37264331 ccatttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactat 37264232  T
Q  208 gatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37264231 gatcttaaaagtattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaactgaaaa 37264137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 19106836 - 19107133
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19106836 tggtgttgagaacactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 19106935  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  19106936 ccatttctcctcaaatagaaaaatattgaaatattttttatatataccgttaagatcatttttaattccgacgggacattgttattccaaataggggcta 19107035  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||| |||| |||||   ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  19107036 tgatcttaaaagtactctttattccgaagagacatatattatcgaagggactatg-ttttaagaccattcttaatttcgaagggacattaaaccgaaaa 19107133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 311
Target Start/End: Original strand, 51698145 - 51698451
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  51698145 ggtgttgagaccactcaaatatggttttaccaccatcctaactttaatttctccaaaacatcaatatgacactacgatcactcaaatatggtgataccac 51698244  T
Q  113 catttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    ||||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  51698245 catttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccggcgggacattgttattccaaatagggactac 51698344  T
Q  208 gatcttaaaagtactctttattctgaa-gggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||| |||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51698345 gatcttaaaagtactcattattctgaatgggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaa 51698443  T
Q  304 gggactat 311  Q
    ||||||||    
T  51698444 gggactat 51698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 31269262 - 31269547
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||        ||||||||||||| |||||||||  |||||||||  |||||||||| ||||||||||||||||||    
T  31269262 tggtgctgagaccactcaaatatggtg--------attctaactttaagttctccaaactatcaatatgatactacgaccactcaaatatggtgatacca 31269353  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||||||||||   || || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31269354 ccatttctcctcaaataaaaaatattgaaatactttttatatatatcgttaagatcattcttaattccgacgggacattgttcttccaaatagggactat 31269453  T
Q  208 gatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31269454 gatcttaaaagtactctttattctgaagggacatttatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccgaaaa 31269547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 31273749 - 31274036
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||        ||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  31273749 tggtgctgagaccactcaaatatggtg--------attctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 31273840  T
Q  112 c--catttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggact 205  Q
    |  ||||||||||||||   || || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31273841 caccatttctcctcaaataaaaaatattgaaatactttttatatatatcgttaagatcattcttaattccgacgggacattgttcttccaaatagggact 31273940  T
Q  206 atgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31273941 atgatcttaaaagtactctttattctgaagggacatttatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccgaaaa 31274036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 19102205 - 19102511
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  19102205 tggtgttgagaccactcaaatatgatgttgccaccattctaactttaatttctccaaaacatcaatatggccatacgaccactcaaatatggtgatacca 19102304  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    || ||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |    
T  19102305 ccgtttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaatttcgacaggacattgttattccaaatagggacaa 19102404  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagacca-ttcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||  ||| ||||||   ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||    
T  19102405 tgatcttaaaagtactctttatttcgaatggacatatattatcgaagggactatg-ttttaagaccatttcttaattccgaatggacattaaaccg-aaa 19102502  T
Q  303 agggactat 311  Q
    |||||||||    
T  19102503 agggactat 19102511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 37259744 - 37259437
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| ||||| |||| ||||||||||||||||||    
T  37259744 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacaaccactcaaatatggtgatacca 37259645  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcat-------------tcttaattccgacgggacattgttattcc 194  Q
    |||||||||||||||   || || ||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||| ||||    
T  37259644 ccatttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcatccgttaagatcattcttaattccgacgggacattgttcttcc 37259545  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaa 294  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37259544 aaatagggactatgatcttaaaaatattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaa 37259445  T
Q  295 accgaaaa 302  Q
    ||||||||    
T  37259444 accgaaaa 37259437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 5928086 - 5927780
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  |||| |||||| ||||| || | ||||  ||||| |||| || ||||||| ||||||||||||||||||    
T  5928086 tggtgctgagaccactcaaatatggtgttaacaccgttctaattttaagtttttcaaactatcaaaatggtaccacgaccactcaaatatggtgatacca 5927987  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5927986 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggacta 5927887  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  5927886 tgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 5927789  T
Q  304 gggactatg 312  Q
    |||||||||    
T  5927788 gggactatg 5927780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 8693945 - 8694246
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac--cat 115  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||| |||||||||||||||||||  |||    
T  8693945 tgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgataccacaccat 8694044  T
Q  116 ttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatc 211  Q
    |||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8694045 ttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgctattccaaatagggactatgatc 8694144  T
Q  212 ttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggac 308  Q
    |||||||||||||||||||| |||||||||   |||||||| |||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  8694145 ttaaaagtactctttattctaaagggacatatattatcgaatggactatg-ttttaagaccattcttaattccaaagggacattaaatc-aaaaagggac 8694242  T
Q  309 tatg 312  Q
    ||||    
T  8694243 tatg 8694246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 13059637 - 13059940
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||    
T  13059637 tggtgctgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatgatgatacca 13059736  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13059737 ccatttctcctcaaatagaaaaatattgaaataatttttata--taccgttaagatcattcttaattccgacgggacattgttattctaaatagggacta 13059834  T
Q  207 tgatcttaaaagtactctttattctgaagggacat-ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    |||||||||||||||||||||||   ||||||||| |||| ||| ||| ||||||||||||||||||||||||||| |||||   |||||||| ||||||    
T  13059835 tgatcttaaaagtactctttatttcaaagggacatattattgaatggattatgtttttaagaccattcttaattcccaaggggtgttaaaccg-aaaagg 13059933  T
Q  306 gactatg 312  Q
    |||||||    
T  13059934 gactatg 13059940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 31766160 - 31766404
Alignment:
Q  72 atcaatatggcactacgaccattcaaatatggtgataccaccatttctcctcaaa--aatat-ttgaaatactttttatatataccgttaagatcattct 168  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  31766160 atcaatatggtactacgaccactcaaatatggtgataccaccatttttcctcaaataaaaatattgaaatactttttatatataccgttaagatcattct 31766259  T
Q  169 taattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaa 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||||| ||||||    
T  31766260 taattccgacgggacattgttattccaaatagggactatgatcttaaaagtactttttattctgaagggacatatattatcgcagggactatg-ttttaa 31766358  T
Q  266 gaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  31766359 gaccattcttaattccgaagggacattaaactg-aaaagggactatg 31766404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 16421257 - 16421572
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |    
T  16421257 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatggtgatacga 16421356  T
Q  112 ccatttc-------------tcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcca 195  Q
    |||||||             |||||||   ||||||  |||| | | ||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  16421357 ccatttccacttttaatttctcctcaattaaaatatc-gaaagaatatttata--taccgttaagatcattcttaattccgacgggacattattattcca 16421453  T
Q  196 aatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    || ||||||||||||||||| ||||||||||||||  ||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16421454 aaaagggactatgatcttaatagtactctttattccaaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 16421553  T
Q  293 aaaccgaaaaagggactatg 312  Q
    |||||| | |||||||||||    
T  16421554 aaaccg-agaagggactatg 16421572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 32081999 - 32081689
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  32081999 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatggtgatacca 32081900  T
Q  112 ccat--------------ttctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcc 194  Q
    ||||              ||||||||||   ||||||| |||  |  |||   |||||| ||||||||     ||||||||||||||||||| |||||||    
T  32081899 ccatttccattttttaatttctcctcaattaaaatattggaagaatattt---atatactgttaagat-----ttaattccgacgggacattattattcc 32081808  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
    ||| ||||||||||||||||| |||||||||||||| |||||||| |   |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32081807 aaa-agggactatgatcttaatagtactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacat 32081709  T
Q  292 taaaccgaaaaagggactatg 312  Q
    ||||||| |||||||||||||    
T  32081708 taaaccg-aaaagggactatg 32081689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 147 - 312
Target Start/End: Complemental strand, 19540910 - 19540743
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||    
T  19540910 tatataccgttaagaccattcttaaatccaacggagcattgttattccaaatagggactatgatcttaaaagtactctttattccgaagggacatatatt 19540811  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19540810 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 19540743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 47244476 - 47244655
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||    
T  47244476 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatgacattacgaccacttaaatatggtgatacca 47244575  T
Q  112 ccatttctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacatt 186  Q
    ||||||||||||||    ||| || || |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  47244576 ccatttctcctcaaatagaaaaatattaaaatactttttatatatatcgttaagatcattcttaattccgaagggacatt 47244655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 12823768 - 12823462
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  12823768 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaaatatcaatatgacactacgaccactcaaatatggtgatacca 12823669  T
Q  112 ccattt--------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcc 194  Q
    ||||||              ||| ||||   ||||||| |||| | | ||||||||  | |||||||||||||||||||||||||| ||||| |||||||    
T  12823668 ccatttcaacttttaaatttctcatcaattaaaatatt-gaaagaatatttatata--ctgttaagatcattcttaattccgacggaacattattattcc 12823572  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
    ||| |||| |||||||||||| | |||||||||||| ||| |||| |   |||||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  12823571 aaa-agggtctatgatcttaataatactctttattccgaaaggacttatattatcgaatggactatgtttttaagaccatttttaattctgaagggacat 12823473  T
Q  292 taaaccgaaaa 302  Q
    ||||| |||||    
T  12823472 taaactgaaaa 12823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 147 - 299
Target Start/End: Original strand, 55252029 - 55252184
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||| |||||||| |   ||    
T  55252029 tatataccgttaaaatcattcttaattctgacgggacattattattccaaaaagggactatgatcttaatagtattctttattccgaagggacttatatt 55252128  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||| || |||||||||||||||||||| ||||| |||||||||||||||||||    
T  55252129 atcgaatgggctatgtttttaagaccattcctaatttcgaagggacattaaaccga 55252184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 6943148 - 6943303
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||| ||||||   ||    
T  6943148 tatataccattaagatcattcttaattccgacgcgacattattattccaaa-agggactatgatcttaaaaatactatttattccgaatggacatatatt 6943246  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    ||||||| |||||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  6943247 atcgaagagactatttttttaagacctttcttaattctgaagggacattataccgaa 6943303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 31766038 - 31766152
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  31766038 tggtgctgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 31766137  T
Q  112 ccatttctcctcaaa 126  Q
    |||||| ||||||||    
T  31766138 ccatttttcctcaaa 31766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 13065531 - 13065383
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||| ||||| ||||||||| ||| ||||||||| || || ||||||| ||| |||||||||||||||||  | ||||||  ||||||||||   ||    
T  13065531 tatatactgttaaaatcattcttgatttcgacgggacgttattgttccaaa-aggcactatgatcttaaaagtcatatttatttcgaagggacatacatt 13065433  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  13065432 atcgaaggggctatgtttttaagacctttcttaattccgaagggacatta 13065383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 15134380 - 15134486
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    ||||||| |||||||||||||||||||||  |||||||||||| ||||| |||||||||| ||||||||| ||||| ||||| |||||||||||||||||    
T  15134380 tggtgttaagaccactcaaatatggtgttaccaccattctaacatttaagttctccaaaatatcaatatgccactaggaccactcaaatatggtgatacc 15134479  T
Q  111 accattt 117  Q
    |||||||    
T  15134480 accattt 15134486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 6942996 - 6943101
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||||||||||| |||  |||||||||| ||||| |||| ||||||||||||||| ||    
T  6942996 tggtgctgagactactcaaatatggtgttaccaccattctaactttaatttctcaaaactatcaatatggtactacaaccactcaaatatggtgatatca 6943095  T
Q  112 ccattt 117  Q
    ||||||    
T  6943096 ccattt 6943101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 16595702 - 16595606
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||||| |||||||  |||||||||||||   |||| | ||||||||||||| ||||||||||||||||||| |||||||||||    
T  16595702 agggactatgatcttaaaaatactcttatttctgaagggacaaattttacctaagggactatgttcttaagaccattcttaattctgaagggacatt 16595606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 39217278 - 39217184
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattct-aactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtg 105  Q
    |||| ||||||||||||||||||||||||   | |||||| || ||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  39217278 tggtattgagaccactcaaatatggtgtttcgatcattctgaattttaacttctccaaaatatcaatatggtactacgaccattcaaatatggtg 39217184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 1151039 - 1150948
Alignment:
Q  205 tatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||||||||||||||  ||||| ||||   ||||| ||||||||||| | |||||| |||||||||||||||||||||||||    
T  1151039 tatgatcttaaaagtactctttattacgaaggtacataaattatcaaagggactatgctcttaagatcattcttaattccgaagggacatta 1150948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 13065670 - 13065578
Alignment:
Q  25 actcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttc 118  Q
    ||||||||||||||||  ||||||||||||||||| ||||| |||| ||||||||  ||||||||||| ||||||||||||||| ||| |||||    
T  13065670 actcaaatatggtgttaccaccattctaactttaagttctc-aaaatatcaatataacactacgaccactcaaatatggtgataacacaatttc 13065578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 23093482 - 23093629
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||| | ||| ||||||||||||| | ||| |||||| ||| |||||| ||| ||||| ||||||||  ||||||||||| |||||||| ||   ||    
T  23093482 tatatactggtaaaatcattcttaatttcaacgagacattattactccaaaaaggaactataatcttaaa--tactctttattttgaagggaaatgaatt 23093579  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||| || |||||||||| |||||||| ||||||||| |||| ||||||||    
T  23093580 atcaaatggactatgttcttaagacctttcttaatttcgaatggacatta 23093629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 19541028 - 19540959
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatgg 81  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||  ||||||||||    
T  19541028 tggtgttgagaccactcaaatatggtgttaacactattctaactttaagttctccaaactatcaatatgg 19540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 40408430 - 40408535
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| || ||||||||||||||||||    ||||||||||||||||| |||||||||| ||||||||| | ||| ||  ||||||||| | ||||||||    
T  40408430 tggtgctgggaccactcaaatatggtgccaccaccattctaactttaagttctccaaaatatcaatatgaccctatgataattcaaatacgatgatacca 40408529  T
Q  112 ccattt 117  Q
    ||||||    
T  40408530 ccattt 40408535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 20513468 - 20513564
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||| | |||||||  |||||||| |||    |||| ||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  20513468 agggactatgatcttaagaatactcttatttctgaagagacgaattttaccgaagggactatgttcttaaaaccattcttaatttcgaagggacatt 20513564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 31298261 - 31298157
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||| ||  |||||||||||  ||||| |||||| ||| |||||||||| ||| | |||| |||||||||||| |||     
T  31298261 tggtgttgagaccactcaaatatggttttaccaccattctaatttttaacttctcc-aaatatcaatatggtacttcaaccactcaaatatggtgctacg 31298163  T
Q  111 accatt 116  Q
    ||||||    
T  31298162 accatt 31298157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 33722613 - 33722560
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  33722613 atttaccgaatggactatgttcttaagaccattcttaattccgaagggacatta 33722560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 47574880 - 47574984
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| |||     
T  47574880 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgttacg 47574978  T
Q  111 accatt 116  Q
    ||||||    
T  47574979 accatt 47574984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 48276291 - 48276223
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacat-taaaccgaaaaagggactat 311  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  48276291 tatcgaagggactatgaatttaagaccattcttaattccaaagggacatctaaaccg-aaaagggactat 48276223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 3997930 - 3997874
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  3997930 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 3997874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 4551233 - 4551305
Alignment:
Q  46 cattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    ||||||||| ||||| || ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  4551233 cattctaacctttaagttgtccaaaatatcaatgtggcactacgaccactcaaatatgatgataccaccattt 4551305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 7902979 - 7902923
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  7902979 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 7902923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 34560648 - 34560704
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  34560648 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 34560704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 32221170 - 32221119
Alignment:
Q  261 tttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  32221170 tttaagaccattcttaattccgaatggagattaaaccgaaaaagagactatg 32221119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 52690990 - 52690891
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatt 116  Q
    ||||||||||||| ||| ||||| ||| ||||||||| ||||| || ||||||| ||| |||||| |||||||||| ||||||| | || ||||||||||    
T  52690990 tgagaccactcaattattgtgttatcatcattctaacatttaacttttccaaaatatcgatatggtactacgaccactcaaatacgatgctaccaccatt 52690891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 55081435 - 55081346
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaag 285  Q
    ||||||||||||||||| | |||||||  ||||||||||||    |||  ||||||||||||||| ||||||||||||||||||| ||||    
T  55081435 agggactatgatcttaagaatactcttatttctgaagggacgaattttcccgaagggactatgttcttaagaccattcttaattctgaag 55081346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 8029975 - 8029907
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||| ||||||||   |||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  8029975 tatcgaatggactatgaacttaatatcattcttaattccgaagggacattaaaccg-aaaagggactatg 8029907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 19906703 - 19906771
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||   |||||  |||||||||||||||||| |||||||||| ||||||||||||||    
T  19906703 tatcgaagggactatgaacttaaggtcattcttaattccgaaggaacattaaacc-aaaaagggactatg 19906771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 33462996 - 33462928
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||| ||||   ||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  33462996 tatcgaagggattatgaacttaagactattcttaattctgaagggacattaaaccg-aaaagggactatg 33462928  T

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Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 33468636 - 33468568
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||| ||||   |||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  33468636 tatcgaagggattatgaacttaagaccattcttaattctaaagggacattaaaccg-aaaagggactatg 33468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 47244625 - 47244665
Alignment:
Q  262 ttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  47244625 ttaagatcattcttaattccgaagggacattaaaccgaaaa 47244665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 13521861 - 13521756
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||| ||||  |||||||||||   ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| |||    
T  13521861 tggtgttgagaccactcaaatatgttgttaccaccattctaattttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgttac 13521763  T
Q  110 caccatt 116  Q
     ||||||    
T  13521762 gaccatt 13521756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 15020202 - 15020105
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||||||||| |||||||  |||  ||||||||   |||| ||||||||||||| | |||||||||| |||||||  ||| ||||||||    
T  15020202 agggactatgatcttaaaaatactcttatttccaaagggacaaaatttaccgaagggactatgctcttaagaccatccttaattttgaatggacatta 15020105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 40408582 - 40408660
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactcttt 226  Q
    ||||||| ||||| ||||||||||||||||| | |||||| || |||  || ||| ||||||||||||||||||||||||    
T  40408582 tatatactgttaaaatcattcttaattccgatgagacattattgttctcaa-aggaactatgatcttaaaagtactcttt 40408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 15805272 - 15805214
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    ||||| ||||||||||| | ||||||  |||||||||||||||||||||||| ||||||    
T  15805272 ttatcaaagggactatgctattaagattattcttaattccgaagggacattataccgaa 15805214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 42316307 - 42316204
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    ||||||||||||||||||| || | |||||  |||||||||||   | || ||| |||||||  | |||||||||||||||||| ||||||||||||| |    
T  42316307 agggactatgatcttaaaa-tattatttatcatgaagggacataaataattgaacggactatactcttaagaccattcttaatttcgaagggacattata 42316209  T
Q  296 ccgaa 300  Q
    |||||    
T  42316208 ccgaa 42316204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 8030343 - 8030302
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  8030343 tggtgttgagaccactcaaatatggtgttaccaccattctaa 8030302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 33463223 - 33463182
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  33463223 tggtgttgagaccactcaaatatggtgttaccaccattctaa 33463182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 16948384 - 16948424
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat 241  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  16948384 ggactatgatcttaaatgtactctttattccgaagggacat 16948424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 19906614 - 19906666
Alignment:
Q  260 ttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||| ||||| |||||  |||||||||||| ||||||||||||||||||    
T  19906614 ttttaagatcattcataattttgaagggacattataccgaaaaagggactatg 19906666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 48276380 - 48276328
Alignment:
Q  260 ttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||| ||||| |||||  |||||||||||| ||||||||||||||||||    
T  48276380 ttttaagatcattcataattttgaagggacattacaccgaaaaagggactatg 48276328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 23093347 - 23093434
Alignment:
Q  30 aatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatt 116  Q
    ||||| ||||| ||| ||||||||| ||||| ||||| |||| ||||||||| |||| |||||  | ||| |||||||||||||||||    
T  23093347 aatatagtgttatcatcattctaacctttaagttctctaaaatatcaatatgacactgcgaccgctaaaaaatggtgataccaccatt 23093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 40684546 - 40684499
Alignment:
Q  246 cgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||| |||||||||| |||||||||||||||||||  |||||||||||    
T  40684546 cgaatggactatgttcttaagaccattcttaattctaaagggacatta 40684499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 2820199 - 2820319
Alignment:
Q  187 gttattcc-aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccg 282  Q
    |||||||| ||| ||||||| ||||||||||| || | |||||||  || |||| |   |||| ||||||||||||   |||||||||||||||||| ||    
T  2820199 gttattcctaaaaagggactttgatcttaaaaataatttttattccaaatggacgtatattattgaagggactatgcacttaagaccattcttaatttcg 2820298  T
Q  283 aagggacatta-aaccgaaaa 302  Q
    ||| ||||||| |||||||||    
T  2820299 aagagacattataaccgaaaa 2820319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 3309586 - 3309666
Alignment:
Q  209 atcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagg 286  Q
    ||||||||| |||| |||||| |||||| ||||   ||||||||||||||||| | | |||| |||||||||||| |||||    
T  3309586 atcttaaaaatactatttattatgaaggaacataaattatcgaagggactatgatctgaagatcattcttaattctgaagg 3309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 20513521 - 20513600
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacattt---atcgaagggactatgtttttaagaccattctt 275  Q
    |||||||||| ||||||||  | |||| |||  ||||||||||||   | |||||||| |||||||||||||||||||||    
T  20513521 agggactatgttcttaaaaccattcttaatttcgaagggacattttaaaccgaagggattatgtttttaagaccattctt 20513600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 39216730 - 39216677
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    |||||||||||| | | |||||| ||||||||| ||||||||||||| ||||||    
T  39216730 gaagggactatgctctcaagacctttcttaatttcgaagggacattataccgaa 39216677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 39991619 - 39991566
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||| ||||||| | ||||||||||||||| || |||||||| ||||    
T  39991619 atttatcgaagagactatgctcttaagaccattcttactttcgaagggagatta 39991566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 48276516 - 48276475
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||||||||||||||| |||||||||||  |||||||||||    
T  48276516 tggtgttgagaccactcgaatatggtgttaccaccattctaa 48276475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 2575027 - 2574975
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||| ||||||||||||| | ||||||||||||||| ||  |||||||||||    
T  2575027 atttaacgaagggactatgctcttaagaccattcttagttttgaagggacatt 2574975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 3997712 - 3997660
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||||    
T  3997712 gaagggactatgctcttaagaccattcttatttccgaaaggataataaaccga 3997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 34560866 - 34560918
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||||    
T  34560866 gaagggactatgctcttaagaccattcttatttccgaaaggataataaaccga 34560918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 39319796 - 39319852
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    ||||| ||||| |||||||||||||||||  ||||||| ||| ||||| ||||||||    
T  39319796 tggtgctgagaacactcaaatatggtgttaccaccattttaattttaacttctccaa 39319852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 9180595 - 9180300
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9180595 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatagcactacgaccactcaaatatggtgatacca 9180496  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9180495 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaataggaacta 9180396  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9180395 tgatcttaaaagtactctttatcctgaagggacatttatcgaagggactatttttttaagaccattcttaattccgaagggacattaaaccgaaaa 9180300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 25497193 - 25496896
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25497193 tggtgttgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgacccctcaaatatggtgatacca 25497094  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||    
T  25497093 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaaaatcattcttaattccgacgtgacattgttattccaaataagtacta 25496994  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25496993 tgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccgaaaa 25496896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 25478165 - 25477859
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  25478165 tggtgttgagactactcaaatatgatgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgacacca 25478066  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||    
T  25478065 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttatttcaaataagtacta 25477966  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  25477965 tgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 25477868  T
Q  304 gggactatg 312  Q
    |||||||||    
T  25477867 gggactatg 25477859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 312
Target Start/End: Original strand, 31326987 - 31327284
Alignment:
Q  22 accactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttctcc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31326987 accactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgataccaccatttctcc 31327086  T
Q  122 tcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaa 216  Q
    |||||    || || ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31327087 tcaaatagaaacatattgaaatactttttatatataccattaagatcattcttaattctgacgggacattgttattccaaatagggactatgatcttaaa 31327186  T
Q  217 agtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||| ||||||  ||||||||||   |||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  31327187 agtactttttatttcgaagggacatatattatcgaaggaactatg-ttttaagaccattcttaattccgaagggacattgaaccgaaacagggactatg 31327284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 302
Target Start/End: Complemental strand, 1934854 - 1934566
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| ||||||| || ||| ||||||||||||||||||||    
T  1934854 tgagaccactcaaatatggtgttcataccattctaactttaagttctccaaactatcaatatggtactacgatcactcatatatggtgataccaccattt 1934755  T
Q  118 ctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatctt 213  Q
    |||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1934754 ctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatctt 1934655  T
Q  214 aaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1934654 aaaagtattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacatgaaaccgaaaa 1934566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 18344656 - 18344956
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||  ||| ||||||||||||||||||||    
T  18344656 tgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgacctctcagatatggtgataccaccattt 18344755  T
Q  118 ctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatct 212  Q
    |||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18344756 ctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatct 18344855  T
Q  213 taaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggact 309  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||| |||||||||||    
T  18344856 taaaagtactatttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttcattccgaaaggacattaaacc-aaaaagggact 18344953  T
Q  310 atg 312  Q
    |||    
T  18344954 atg 18344956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 12797153 - 12797458
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  12797153 tggtgttgagaccactcaaatatggtattgccaccattctaatattaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatac-a 12797251  T
Q  112 ccatttctcctc------aaaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggact 205  Q
     |||||||||||      ||||||||| |||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| |    
T  12797252 tcatttctcctcgaatagaaaaatatt-gaaacactttttatatatatcgttaagatcatttttaattctgacgggacattgttattccaaacagggatt 12797350  T
Q  206 atgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||| |||    
T  12797351 atgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatg-ttttaagagcattcttaattctgaagggacattaaaccg-aaa 12797448  T
Q  303 agggactatg 312  Q
    ||||||||||    
T  12797449 agggactatg 12797458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 132 - 302
Target Start/End: Complemental strand, 9185161 - 9184991
Alignment:
Q  132 ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattct 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9185161 ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttatcct 9185062  T
Q  232 gaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9185061 gaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 9184991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 312
Target Start/End: Complemental strand, 19892325 - 19892035
Alignment:
Q  20 agaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttct 119  Q
    |||||||||||||||||||||   |||||||||||||||| |||||||||  ||||||  || |||||||||| ||||||||||||||||||||||||||    
T  19892325 agaccactcaaatatggtgttaataccattctaactttaaattctccaaactatcaat--ggtactacgaccactcaaatatggtgataccaccatttct 19892228  T
Q  120 cctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatctta 214  Q
    |||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||  ||||||      ||||||||||||||||||||||    
T  19892227 cctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgactagacatt------ccaaatagggactatgatctta 19892134  T
Q  215 aaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactat 311  Q
    |||||||||||||||||||||||||||   |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  19892133 aaagtactctttattctgaagggacatatattatcgaatggactatg-ttttaagaccattcttaattctgaagggacattaaaccg-aaaagggactat 19892036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 94 - 312
Target Start/End: Complemental strand, 17968748 - 17968525
Alignment:
Q  94 tcaaatatggtgataccaccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgtt 189  Q
    |||||||||||||||||||||||||||||||||   || || ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  17968748 tcaaatatggtgataccaccatttctcctcaaataaaaaatattgaaatactttttatatataccgtgaagatcattcttaattccaacgggacattgtt 17968649  T
Q  190 attccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagg 286  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  17968648 cttccaaatagggactatgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagg 17968550  T
Q  287 gacattaaaccgaaaaagggactatg 312  Q
    |||||||||||| |||||||||||||    
T  17968549 gacattaaaccg-aaaagggactatg 17968525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 28603531 - 28603762
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||| |||||||||  || ||||||| |||||||||| ||||||||| ||||||||    
T  28603531 tggtgatgagaccacttaaatatggtgttaacaccattctaactttaagttctccaaactattaatatggtactacgaccactcaaatatgatgatacca 28603630  T
Q  112 ccatttctcctcaa----aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    ||||||||||||||    ||| ||  |||||| | ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28603631 ccatttctcctcaattagaaaaataagaaataatatttata--taccgttaagatcattcttaatttcgacgggacattgttattccaaatagggactat 28603728  T
Q  208 gatcttaaaagtactctttattctgaagggacat 241  Q
    |||||||||||||||||||||||||||| |||||    
T  28603729 gatcttaaaagtactctttattctgaagcgacat 28603762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 9189674 - 9189573
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9189674 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 9189575  T
Q  112 cc 113  Q
    ||    
T  9189574 cc 9189573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 40847466 - 40847171
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||    ||||||||||||||| |||||||||  ||||| |||  |||||||||| ||||||||||||||||||    
T  40847466 tggtgttgagaccactcaaatatgatgttacgtccattctaactttaagttctccaaactatcaagatgatactacgaccactcaaatatggtgatacca 40847367  T
Q  112 ccatttct--------------cctcaaaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaa 197  Q
    |||||||               ||||||||||  |||||| | | ||||||||  |  |||||||||||||||||| |||||||||||| || |||||||    
T  40847366 ccatttcgactttttaatttcacctcaaaaattattgaaagaatatttatata--cttttaagatcattcttaattacgacgggacattattgttccaaa 40847269  T
Q  198 tagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
     |||||||||||| ||||||| |||||||||||| |||||| ||   ||||| || || |||||||||||||||| ||||||||| |||| ||||||||    
T  40847268 -agggactatgatattaaaagcactctttattcttaagggagatatgttatcaaaagggctatgtttttaagacctttcttaatttcgaatggacatta 40847171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 14104952 - 14105048
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggac---atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||| | |||||||  ||||||||||||   ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  14104952 agggactatgatcttaagaatactcttatttctgaagggacgaaatttaccgaagggactatgttcttaagaccattcttaattccaaagggacatt 14105048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 17545166 - 17545060
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||| ||||| |||  |||||||||| | ||||| || ||||||||| |||||| |    
T  17545166 tggtgctgagaccactaaaatatggtgttaccaccattctaactttaagttctctaaactatcaatatggtattacgaacactcaaatatgatgatacta 17545067  T
Q  112 ccatttc 118  Q
    || ||||    
T  17545066 ccttttc 17545060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 293
Target Start/End: Complemental strand, 13291207 - 13291114
Alignment:
Q  203 actatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||||| |||| |||||||| |||||||||   |||||||||||| |||  | ||||||||||| | ||||||||||||||||||    
T  13291207 actatgatcttaaaaatactatttattcttaagggacataaattatcgaagggattatactcttaagaccattgtcaattccgaagggacatta 13291114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 7734953 - 7735090
Alignment:
Q  146 atatataccgttaagatcattcttaattccgacgggacattgttattccaa-atagggactatgatcttaaaagtactctttattctgaagggaca---t 241  Q
    ||||||||  |||||||||||||||||| |||  ||||||| ||||| |   | || ||||||||||||| ||||||||||||||| ||| | |||   |    
T  7734953 atatatactcttaagatcattcttaatttcgaatggacattattatttctcgaaagagactatgatcttacaagtactctttattccgaatgaacatatt 7735052  T
Q  242 ttatcgaagggactatgtttttaagaccattcttaatt 279  Q
    ||||| || |||||||| | ||||||||||||||||||    
T  7735053 ttatcaaatggactatgctcttaagaccattcttaatt 7735090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 292
Target Start/End: Original strand, 38591572 - 38591726
Alignment:
Q  145 tatatataccgttaagatcattcttaattccgacgggacattgttatt----ccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||||||  | ||||||||||| ||||  || |||||||| |||||    | ||| ||| ||||||||||||||| |||||||||||   ||||||||    
T  38591572 tatatatactatcaagatcattctaaattttgaagggacattattattattactaaaaaggaactatgatcttaaaaatactctttattacaaagggaca 38591671  T
Q  241 t---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    |   ||||| || ||||||||||||||||| ||||| || || ||||||||||||    
T  38591672 taaattatcaaatggactatgtttttaagatcattcatattttcgaagggacatt 38591726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 42926274 - 42926215
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||   |||| |||||||||||||| |||||||||||||||||||||    
T  42926274 tatcgaagggactatgaacttaataccattcttaattctgaagggacattaaaccgaaaa 42926215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 10160421 - 10160330
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    ||||||||||||||||| || |||||||||| || ||||||   | || |||||||||||| | |||||||||||||| ||||||||||||||    
T  10160421 ggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccgaagggaca 10160330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 30643516 - 30643607
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaaggga 288  Q
    ||||||||||||||||||| || |||||||||| || ||||||   | || |||||||||||| | |||||||||||||| ||||||||||||    
T  30643516 agggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccgaaggga 30643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 30651380 - 30651438
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  30651380 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 30651438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 7737494 - 7737426
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||| |||||||   |||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  7737494 tatcgaagagactatgaacttaagaccattcttaattccaaagggacattaaaccg-taaagggactatg 7737426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 17255057 - 17255013
Alignment:
Q  249 agggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  17255057 agggactatgttcttaagaccattcttaatttcgaagggacatta 17255013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 28855236 - 28855330
Alignment:
Q  22 accactcaaatatggtgttgtcaccattctaacttt-aatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatt 116  Q
    |||||||||||||||||||  ||||||||||| ||| || |||| ||||| |||||||||| ||| | |||| |||||||||||| ||| ||||||    
T  28855236 accactcaaatatggtgttaccaccattctaattttgaacttct-caaaatatcaatatggtacttcaaccactcaaatatggtgttacgaccatt 28855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 17453233 - 17453175
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    |||||||||||| | ||||||||||||||||||||||||| ||| || || ||||||||    
T  17453233 gaagggactatgctattaagaccattcttaattccgaaggaacaatatactgaaaaagg 17453175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 19578258 - 19578180
Alignment:
Q  37 tgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacca 114  Q
    |||| ||||||||||||| ||||| ||||| |||  ||||||| ||  |||||||||||||||||||||||||| ||||    
T  19578258 tgttatcaccattctaacatttaagttctctaaattatcaatacggtgctacgaccattcaaatatggtgatacaacca 19578180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 6297756 - 6297703
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    ||||||||||||||||||||| ||||  ||||||||||| ||||| ||||||||    
T  6297756 tgttgagaccactcaaatatgatgttaccaccattctaattttaacttctccaa 6297703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 10160599 - 10160495
Alignment:
Q  10 tttggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgata 108  Q
    |||||||||||||||||||||||||||| ||  |||||||||||  ||||| |||||| ||| |||||||||| | | | || | |||||||||||| ||    
T  10160599 tttggtgttgagaccactcaaatatggtattaccaccattctaatttttaacttctcc-aaatatcaatatggtatttcaactactcaaatatggtgtta 10160501  T
Q  109 ccacca 114  Q
    | ||||    
T  10160500 cgacca 10160495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 17453454 - 17453413
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  17453454 tggtgttgagaccactcaaatatggtgttatcatcattctaa 17453413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 30651399 - 30651481
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| ||||||||  ||  || ||||||||||||| |||||| |  ||||||||||| |||||||||    
T  30651399 ttaagaccattcttaattccgaagggacatt--taaaccgaatagggactatggtcttaagaacactctttattccgaagggaca 30651481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 17545014 - 17544975
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacatt 186  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  17545014 tatatactgttaagatcattcttaattccgacgagacatt 17544975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 19542181 - 19542297
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    ||||||| | ||||||||| |||||||||||| |||| |||||   |||| ||||  |||||| | |||| ||||||| ||||| ||||| ||||||| |    
T  19542181 agggactgtaatcttaaaaatactctttattccgaagagacattaattattgaagcaactatgctcttaataccattcataatttcgaagagacattata 19542280  T
Q  296 ccgaaaaagggactatg 312  Q
     |  |||||||||||||    
T  19542281 tctcaaaagggactatg 19542297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 29678220 - 29678278
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||| ||||||   ||||||||||||||||||||||||| ||| ||||||||||    
T  29678220 tatcgaaggaactatgaacttaagaccattcttaattccgaaggaacatttaaaccgaa 29678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 30643411 - 30643453
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac 54  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  30643411 tggtgttgagaccactcaaatatgatgttaccaccattctaac 30643453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 6297593 - 6297491
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||| |||||||||||| || | |||||||| ||| |||||   | || |||||||||||| | ||||||||||||||| ||||||| ||| | ||||    
T  6297593 agggaccatgatcttaaaa-tattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaa 6297495  T
Q  296 ccga 299  Q
    ||||    
T  6297494 ccga 6297491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 29677995 - 29678036
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  29677995 tggtgctgagaccactcaaatatggtgttaccaccattctaa 29678036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 30651156 - 30651197
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  30651156 tggtgctgagaccactcaaatatggtgttaccaccattctaa 30651197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 44957229 - 44957184
Alignment:
Q  248 aagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||| || |||||| |||||||| ||||||||||||||||    
T  44957229 aagggactatattattaagatcattcttatttccgaagggacatta 44957184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 29678131 - 29678183
Alignment:
Q  260 ttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||| | ||||| |||||  |||||||||||| ||||||||||||||||||    
T  29678131 ttttaaaatcattcataattttgaagggacattataccgaaaaagggactatg 29678183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 30629078 - 30629181
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||| ||| ||||||||||||||||||||  ||||||| |||| |||||  ||| ||||| | |||||||| | | | |||| |||||||||||| ||||    
T  30629078 tggtattgtgaccactcaaatatggtgttaccaccattgtaacatttaacatct-caaaataccaatatggtatttcaaccactcaaatatggtgttacc 30629176  T
Q  111 accat 115  Q
    |||||    
T  30629177 accat 30629181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 35602145 - 35602173
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgtt 40  Q
    |||||||||||||||||||||||||||||    
T  35602145 tggtgttgagaccactcaaatatggtgtt 35602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 38427119 - 38427026
Alignment:
Q  202 gactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||||| || | ||||||  ||||||||||   |||||||||| || ||| | | || |||||| ||||||||||||||||||||    
T  38427119 gactatgatcttaaaaatattatttatttcgaagggacataaattatcgaaggaaccatgctctaaa-accatttttaattccgaagggacatta 38427026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 14438566 - 14438262
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  14438566 tggtgttgagaccactcaaatatggttttgctaccattctaactttaatttctccaaaacttcaatatggcactacgaccactcaaatatggtgatacca 14438467  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14438466 ccatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 14438367  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14438366 tgatcttaaaagtactctttattctgaaggaacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaaggg 14438268  T
Q  307 actatg 312  Q
    ||||||    
T  14438267 actatg 14438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 27709158 - 27709462
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27709158 tggtgttgcgaccactcaaatatggtgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 27709257  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27709258 ccatttctcctcaaatagaaaaatattaaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagagacta 27709357  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||     
T  27709358 tgatcttaaaaatactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagagacattaaacc-aaaaagga 27709456  T
Q  307 actatg 312  Q
    ||||||    
T  27709457 actatg 27709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 758235 - 757928
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  758235 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 758136  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  758135 ccatttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaatttcgacgggacattgttcttccaaatagggactat 758036  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  758035 gatcttaaaagtactctttaatctgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 757936  T
Q  305 ggactatg 312  Q
    ||||||||    
T  757935 ggactatg 757928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 23661330 - 23661037
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    |||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| ||||||| || |||||||||||||||||||    
T  23661330 ggtgctgagaccactcaaatatggtgttcataccattctaactttaagttctccaaactatcaatatggtactacgatcactcaaatatggtgataccac 23661231  T
Q  113 catttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    ||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23661230 catttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatg 23661131  T
Q  209 atcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23661130 atcttaaaagtattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 23661037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 24038237 - 24037944
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    |||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| ||||||| || |||||||||||||||||||    
T  24038237 ggtgctgagaccactcaaatatggtgttcataccattctaactttaagttctccaaactatcaatatggtactacgatcactcaaatatggtgataccac 24038138  T
Q  113 catttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    ||||||||||||||   || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24038137 catttctcctcaaataaaaaatattgaaatactttttatatataccgtttagatcattcttaattccgacgggacattgttcttccaaatagggactatg 24038038  T
Q  209 atcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038037 atcttaaaagtattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 24037944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 18467451 - 18467757
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  18467451 tggtgctgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 18467550  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18467551 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 18467650  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  18467651 tgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 18467748  T
Q  304 gggactatg 312  Q
    |||||||||    
T  18467749 gggactatg 18467757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 312
Target Start/End: Complemental strand, 23665989 - 23665687
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    |||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| ||||||| || |||||||||||||||||||    
T  23665989 ggtgctgagaccactcaaatatggtgttcataccattctaactttaagttctccaaactatcaatatggtactacgatcactcaaatatggtgataccac 23665890  T
Q  113 catttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    ||||||||||||||   || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23665889 catttctcctcaaataaaaaatattgaaatactttttatatataccgtttagatcattcttaattccgacgggacattgttcttccaaatagggactatg 23665790  T
Q  209 atcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggac 308  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  23665789 atcttaaaagtattctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc-aaaaagcgac 23665691  T
Q  309 tatg 312  Q
    ||||    
T  23665690 tatg 23665687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 55326002 - 55326298
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55326002 tggtgttgagaccactcaaatatggtgttaccaccattctaactttaatttttccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 55326101  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55326102 ccatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 55326201  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  55326202 tgatcttaaaagtactctttattctgaagggacatatattatcgaagggattatg-ttttaagaccattcttaattccgaa-ggacattcaaccgaaaa 55326298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 7571085 - 7570780
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||   |||||| ||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  7571085 tggtgctgagaccactcaaatatggtgttaataccattataactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 7570986  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||||||||||   || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7570985 ccatttctcctcaaataaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttcttccaaatatggactat 7570886  T
Q  208 gatcttaaaagtactctttattctgaagggacatttatcg-aagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7570885 gatcttaaaagtactctttattctaaatggacatttatcgaaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaaggg 7570786  T
Q  307 actatg 312  Q
    ||||||    
T  7570785 actatg 7570780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 312
Target Start/End: Original strand, 29350468 - 29350772
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29350468 gtgttgagagcactcaaatatggtgttgccaccattctaattttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgataccacc 29350567  T
Q  114 atttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    |||||||||||||    || || ||||||||||||||||||||| |||||||||||||| ||||||  | || |||||||||||||||||||||||||||    
T  29350568 atttctcctcaaatagaaaaatattgaaatactttttatatatatcgttaagatcattcataattctaatggaacattgttattccaaatagggactatg 29350667  T
Q  209 atcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    ||||||||| || ||||||||||||||||||||   ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||    
T  29350668 atcttaaaaatattctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattattaattccaaagggacattaaaccg-aaaagg 29350765  T
Q  306 gactatg 312  Q
    |||||||    
T  29350766 gactatg 29350772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 296
Target Start/End: Complemental strand, 2207616 - 2207325
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  2207616 tggtgttgagaccactcaaatatggtgttgccaccgttctaactttaatttcttcaaaacatcaatatggcactacgaccactcaaatatgatgatacca 2207517  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |    
T  2207516 ccatttctcctcaaatagaaaaatgttgaaatactttttatatataccgttaagatcattcttaatttcgacgggacattgttattccaaacagggacca 2207417  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 296  Q
    |||||||||||||||||||||||| |||| |||||   |||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  2207416 tgatcttaaaagtactctttattccgaagagacatatattattgaagggactatg-ctttaagaccattcttaatttcgaagggacattaaac 2207325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 18472233 - 18472539
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||   | |||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  18472233 tggtgctgagaccactcaaatatggtgttaatatcattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 18472332  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18472333 ccatttctcctcaaatagaaaaatattaaaatactttttatatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggacta 18472432  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    | ||||||||||||||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  18472433 tcatcttaaaagtactctttattctaaagggacatatattatcgaagggactatg-ttttaagaccattcttaattctgaagggacattaaaccg-aaaa 18472530  T
Q  304 gggactatg 312  Q
    |||||||||    
T  18472531 gggactatg 18472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 312
Target Start/End: Complemental strand, 39775589 - 39775290
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||    
T  39775589 tgagaccactcaaatatggtgttaataccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgataccaccattt 39775490  T
Q  118 ctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatctt 213  Q
    |||||||||   || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39775489 ctcctcaaataaaaaatattgaactactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagagactatgatctt 39775390  T
Q  214 aaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 310  Q
    ||||||||| ||||||||||||||||||   |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  39775389 aaaagtactatttattctgaagggacatatattatcgcaaggactatg-ttttaagaccattcttaattccgaagggacattaaacc-caaaagggacta 39775292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 55431541 - 55431775
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  55431541 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatgacactacgaccactcaaatatggtgatacca 55431640  T
Q  112 ccatttctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    | ||||||||||||    ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  55431641 caatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatatggatta 55431740  T
Q  207 tgatcttaaaagtactctttattctgaagggacat 241  Q
    |||||||||||||||||||||||||||||||||||    
T  55431741 tgatcttaaaagtactctttattctgaagggacat 55431775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 46964241 - 46964543
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||    ||||||||||||| | |||| |||||||||||||    
T  46964241 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatttatccaagacat----atggcactacgacaactcaagtatggtgatacca 46964336  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    | ||||||| |||||    || || |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||| |||||||||||   | ||    
T  46964337 caatttctcttcaaatagaaaaatattgaaataatttttatata--ctgttaagatcattcttaattccgacgggacattgctattccaaatataaatta 46964434  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  46964435 tgatcttaaaagtactctttattctgaagggacatatattatcgaagagactatgtttttaagaccattcttaattctaaagggacattaaaccgaaaaa 46964534  T
Q  304 gggactatg 312  Q
    |||||||||    
T  46964535 gggactatg 46964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 32473754 - 32473554
Alignment:
Q  44 accattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttctcctcaaaaatat----ttgaaata 139  Q
    |||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||     ||||||||    
T  32473754 accattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgataccaccatttctcctcaaatataaaatattgaaata 32473655  T
Q  140 ctttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggac 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| |  |||||| |||| ||||||||    
T  32473654 ctttttatatataccgttaagatcattcttaattccgacgggacattgtttttccaaacagggaccatggtcttaagaacactcttaattccgaagggac 32473555  T
Q  240 a 240  Q
    |    
T  32473554 a 32473554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 13 - 312
Target Start/End: Complemental strand, 3657106 - 3656793
Alignment:
Q  13 ggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    |||| |||||||| ||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  3657106 ggtgctgagaccaatcaaatatgatgttaccaccattctaactttaatttctccaaaatatcaatatggcactacgaccactcaaatatgg--ataccac 3657009  T
Q  113 catt--------------tctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattc 193  Q
    ||||              |||||||||    ||| || || ||||| | ||||||||  || |||||||| |||||||||||||||||||||| ||||||    
T  3657008 catttccactttttaatttctcctcaattagaaaaatattcaaataatatttatata--cctttaagatcgttcttaattccgacgggacattattattc 3656911  T
Q  194 caaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    |||| ||||| ||||||||||| |||||||||||||  |||||||| |   |||||||||||||||||||    |||||||||| |||| ||||||||||    
T  3656910 caaaaagggattatgatcttaacagtactctttattacgaagggacttatattatcgaagggactatgtt----agaccattctgaatttcgaagggaca 3656815  T
Q  291 ttaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||||||    
T  3656814 ttaaaccgaaaaagggactatg 3656793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 312
Target Start/End: Original strand, 3419229 - 3419520
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatgg--cactacgaccattcaaatatggtgataccacc----- 113  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||| | ||||||||||||||||||         
T  3419229 gaccactcaa-tatggtgttgccaccattctaactttaatttctccaaaatatcaatatggcacactacgaccacttaaatatggtgataccaccatttt 3419327  T
Q  114 ---------atttctcctca---aaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagg 201  Q
             |||||||||||   |||||| |||||| | | ||  ||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||    
T  3419328 cactttttaatttctcctcaattaaaata-ttgaaagaatatt--tatatactgttaagatcattcttaattccgacgggacattattattctaaaaagg 3419424  T
Q  202 gactatgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaa 301  Q
    |||||||||||||| | ||||||||||||               |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3419425 gactatgatcttaataatactctttattc---------------cgaaaggactatgtttttaagaccattcttaattccgaaggaacattaaaccgaaa 3419509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 25726658 - 25726553
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  25726658 tggtgttaagaccactcaaatatggtgttatcatcattctaacctttaagttctccaaaatatcaatatggtactacgaccattcaaatatggtgatacc 25726559  T
Q  111 accatt 116  Q
    ||||||    
T  25726558 accatt 25726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 17025833 - 17025689
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||| || ||||||||||||||| ||||||||||||| | ||| |||| |||||||||| |||||||| |||| ||||||||||||||||||   ||    
T  17025833 tatatactgtaaagatcattcttaatcccgacgggacattatcattacaaaaagggactatggtcttaaaaatactttttattctgaagggacatatatt 17025734  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaaggga 288  Q
    |||||||| |||||||| |||||| | ||||||||| ||||||||    
T  17025733 atcgaaggaactatgttcttaagaactttcttaatttcgaaggga 17025689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 10708544 - 10708438
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||| ||  |||||||||| ||||||| || ||||||||||||||||||    
T  10708544 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaagttctccgaactatcaatatggtactacgagcactcaaatatggtgatacca 10708445  T
Q  112 ccatttc 118  Q
    |||||||    
T  10708444 ccatttc 10708438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 12112395 - 12112248
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||||||||||||||||||||||| | ||  |||||| ||||| |||||||||| |||||||||||||||| | ||||||  ||||||||||   ||    
T  12112395 tatataccgttaagatcattcttaatttccacatgacattattatttcaaatagggagtatgatcttaaaagtattatttatttcgaagggacatatgtt 12112296  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||| |||||||||||||  ||  |||||||||| ||||||||||||    
T  12112295 atcgaagagactatgttttta--acatttcttaattctgaagggacatta 12112248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 20520280 - 20520386
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||| |||||| ||||||||||||  |||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||| |     
T  20520280 tggtgctgaaaccactaaaatatggtgttaccaccattctaactttaatttctccaaagtatcaatattgcactacgaccactcaaatatggtgatatcg 20520379  T
Q  112 ccatttc 118  Q
    |||||||    
T  20520380 ccatttc 20520386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 25726496 - 25726356
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaaggg 252  Q
    ||||||||||||||||||||||||| || || ||||| ||||   |||||||||||| | ||||||||||||||   |||||||||   |||||||||||    
T  25726496 ttaagatcattcttaattccgacggaacgttattatttcaaaattggactatgatctgataagtactctttatttcaaagggacatatattatcgaaggg 25726397  T
Q  253 actatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||| |||||||  ||||||| | |||||||||||||    
T  25726396 actatgttcttaagacatttcttaacttcgaagggacatta 25726356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 3034082 - 3034151
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3034082 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 3034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 3693057 - 3693126
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3693057 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 3693126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 8070117 - 8070186
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8070117 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 8070186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 8888369 - 8888438
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8888369 ttatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 8888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 11399729 - 11399884
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    ||||||| ||||||||||||||||||| |||   |||||| || ||||||| ||||||||||||||||||| |||  ||||||  ||| ||||||   ||    
T  11399729 tatatactgttaagatcattcttaatttcgatcagacattattgttccaaa-agggactatgatcttaaaactacgttttattacgaatggacatacatt 11399827  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    ||||||| || |||| |||||| ||| ||||||||| ||||||||||||| ||||||    
T  11399828 atcgaagagattatgcttttaatacctttcttaatttcgaagggacattataccgaa 11399884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 48432036 - 48431939
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||| ||||||||| | |||||||  ||| |||||||||   |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  48432036 agggactttgatcttaagaatactcttatttccgaagggacaaaatttatcgaagggactatgttcttaagaccattcttaatttcgaagggacatta 48431939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 3673025 - 3673094
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3673025 ttatcaaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 3673094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 4662571 - 4662622
Alignment:
Q  241 tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4662571 tttatcgaagggactatgttcttaagaccattcttaattccgaagggacatt 4662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 8883609 - 8883678
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  8883609 ttatcgaaggtactatgctcttaagaccatttttaattccgaagggacattaaaccg-aaaagggactatg 8883678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 10708380 - 10708276
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    ||||||||||||||||| | |||| ||||||| ||| ||||||   ||||||||||| |||||||||||| ||| || |||||||| ||||||||||| |    
T  10708380 agggactatgatcttaataatactttttattccgaatggacatatattatcgaaggggctatgtttttaaaaccttttttaattccaaagggacattata 10708281  T
Q  296 ccgaa 300  Q
    |||||    
T  10708280 ccgaa 10708276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 10586058 - 10586000
Alignment:
Q  10 tttggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  10586058 tttggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 10586000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 12112518 - 12112442
Alignment:
Q  43 caccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttc 118  Q
    |||||||||||| ||||| |||||||| | ||||||||||||||||||||  |||||||||||||| | ||||||||    
T  12112518 caccattctaacctttaagttctccaatatatcaatatggcactacgacccctcaaatatggtgattctaccatttc 12112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 12965516 - 12965460
Alignment:
Q  246 cgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||   |||||||||||||||||| ||||||||||||||||||||||    
T  12965516 cgaagggactatgaacttaagaccattcttaatttcgaagggacattaaaccgaaaa 12965460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 16983375 - 16983419
Alignment:
Q  248 aagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  16983375 aagggactatgttcttaagaccattcttaattccgaagggacatt 16983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 45904411 - 45904355
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  45904411 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 45904355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 45904867 - 45904811
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  45904867 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 45904811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 18011734 - 18011827
Alignment:
Q  200 gggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    |||| |||| |||||||| || | |||||| ||||| |||||   ||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  18011734 gggattatggtcttaaaaatattatttattttgaagcgacataaattatcgaagggactatgtttttaagaccatttttgatttcgaagggaca 18011827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 20520438 - 20520487
Alignment:
Q  262 ttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  20520438 ttaagatcattcttaattccgaagggacattaaaccg-aaaagggactatg 20520487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 8069900 - 8070003
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||     
T  8069900 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacg 8069997  T
Q  111 accatt 116  Q
    ||||||    
T  8069998 accatt 8070003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 8883391 - 8883495
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||||||||  |||||||||||   ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||    
T  8883391 tggtgttgagaccactcaaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctac 8883488  T
Q  110 caccatt 116  Q
     ||||||    
T  8883489 gaccatt 8883495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 35456636 - 35456536
Alignment:
Q  202 gactatgatcttaaaagtactctttattctgaagggacatt---tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg 298  Q
    |||||||||||||||| || | |||||| ||| |||||||    |||| ||| || |||| | |||||||||||||||||||||||||||||||| ||||    
T  35456636 gactatgatcttaaaa-tattatttattttgatgggacataaactatcaaagagattatgctcttaagaccattcttaattccgaagggacattataccg 35456538  T
Q  299 aa 300  Q
    ||    
T  35456537 aa 35456536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 3033868 - 3033968
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  3033868 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgacc 3033965  T
Q  114 att 116  Q
    |||    
T  3033966 att 3033968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 8888151 - 8888192
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  8888151 tggtgttgagaccactcaaatatggtgttaccaccattctaa 8888192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 19276779 - 19276682
Alignment:
Q  22 accactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaac-atcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    ||||||||||| ||||||| ||| | ||||||| ||||| | || |||||  |||||||||| || || |||| ||||||||||||||||||||||||    
T  19276779 accactcaaatttggtgttatcatcgttctaacctttaaatccttcaaaaatatcaatatggtaccacaaccactcaaatatggtgataccaccattt 19276682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 3672810 - 3672911
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    ||||||||||||||||||||||||||  |||||||||||   ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| ||    
T  3672810 tgttgagaccactcaaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgac 3672907  T
Q  113 catt 116  Q
    ||||    
T  3672908 catt 3672911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 3692842 - 3692943
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    ||||||||||||||||||||||||||  |||||||||||   ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| ||    
T  3692842 tgttgagaccactcaaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgac 3692939  T
Q  113 catt 116  Q
    ||||    
T  3692940 catt 3692943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 31002918 - 31002970
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttct 64  Q
    |||| ||||||||||||||||||||||||  ||||||||||| ||||| ||||    
T  31002918 tggtattgagaccactcaaatatggtgttaccaccattctaattttaacttct 31002970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 293
Target Start/End: Original strand, 20508043 - 20508135
Alignment:
Q  203 actatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||| ||||| |||||||||| |||||||||| |   ||||||||  ||||||||| |||||| |||||||||||  |||| |||||||    
T  20508043 actatgatcctaaaaatactctttat-ctgaagggacttgtattatcgaatcgactatgttcttaagatcattcttaattttgaagtgacatta 20508135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 28125576 - 28125630
Alignment:
Q  251 ggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    |||||||| | |||||||||||||||||||||||  |||| || |||||||||||    
T  28125576 ggactatgctcttaagaccattcttaattccgaaatgacaatataccgaaaaagg 28125630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 53358545 - 53358599
Alignment:
Q  251 ggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    |||||||| | ||||||||||||||| || |||| ||||| ||||||||||||||    
T  53358545 ggactatgctcttaagaccattcttagttgcgaaaggacaataaaccgaaaaagg 53358599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 12971364 - 12971311
Alignment:
Q  260 ttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatgt 313  Q
    |||||||| ||||| |||||  |||||||||||| || ||||||||||||||||    
T  12971364 ttttaagatcattcgtaattttgaagggacattatactgaaaaagggactatgt 12971311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 20520435 - 20520468
Alignment:
Q  153 ccgttaagatcattcttaattccgacgggacatt 186  Q
    ||||||||||||||||||||||||| ||||||||    
T  20520435 ccgttaagatcattcttaattccgaagggacatt 20520468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 6596011 - 6595963
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    ||||||||||||||||| | ||||| |||||||| |||||||| |||||    
T  6596011 ttatcgaagggactatgctcttaagcccattcttgattccgaaaggaca 6595963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 10585840 - 10585788
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||||    
T  10585840 gaagggactatgctcttaagaccattcttatttccgaaaggataataaaccga 10585788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 12566339 - 12566303
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaacttt 57  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  12566339 gaccactcaaatgtggtgttatcaccattctaacttt 12566303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 13156259 - 13156223
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaacttt 57  Q
    ||||||||||||||||||||  |||||||||||||||    
T  13156259 gaccactcaaatatggtgttaccaccattctaacttt 13156223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 13260742 - 13260706
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaacttt 57  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13260742 gaccactcaaatgtggtgttatcaccattctaacttt 13260706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 290
Target Start/End: Original strand, 19339727 - 19339817
Alignment:
Q  203 actatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    |||||| |||||||| || | |||||| ||||| |||||   |||| ||| | |||||| ||||||||||||||||||||  |||||||||    
T  19339727 actatggtcttaaaaatattatttattttgaagcgacataaattattgaatgaactatggttttaagaccattcttaattttgaagggaca 19339817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 45904196 - 45904144
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||||    
T  45904196 gaagggactatgctcttaagaccattcttatttccgaaaggatagtaaaccga 45904144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 7451982 - 7452277
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  7451982 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacttcaatatggcactacgaccactcaaatacggtgatacca 7452081  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7452082 ccatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaagatcattcttaattttgacgggacattgttattccaaatagggacta 7452181  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7452182 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 7452277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 37248671 - 37248364
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  37248671 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 37248572  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||| ||||||   || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37248571 ccatttcttctcaaataaaaaatattgaaatactttttatatatactgttaagatcattcttaattccgacgggacattgttcttccaaatagggactat 37248472  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37248471 gatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtttttaagatcattcttaattctgaagggacattaaaccgaaaaag 37248372  T
Q  305 ggactatg 312  Q
    ||||||||    
T  37248371 ggactatg 37248364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 29167840 - 29167535
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  29167840 tggtgctgagaccgctcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 29167741  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    | |||||||||||||   || || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29167740 ctatttctcctcaaataaaaaatattgaaatacttttgatatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactat 29167641  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  29167640 gatcttaaaagtactctttattctgaagggacatatattatcgaagggacaatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaag 29167543  T
Q  305 ggactatg 312  Q
    ||||||||    
T  29167542 ggactatg 29167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 40148123 - 40148429
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40148123 tggtgttgagaccacttaaatatggtgttgcccccattctaactttaatttctccaaaacatcaatatggcactacaaccactcaaatatggtgatacca 40148222  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||| |||||| |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |    
T  40148223 ccatttctcctcaaatagaaaaatattgaaatattttttacatataccgttaacatcattctcaattccgacgagacattgttattccaaatagggacaa 40148322  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  40148323 tgatcttaaaagtactttttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattctgaagggacattaaaccg-aaaa 40148420  T
Q  304 gggactatg 312  Q
    |||||||||    
T  40148421 gggactatg 40148429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 37550017 - 37549714
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacca 114  Q
    ||||||||||||||||||||||||||   | |||||||||||||| ||||| |||  |||||||||| |||||||||| | |||||||||||||||||||    
T  37550017 tgttgagaccactcaaatatggtgttaatatcattctaactttaagttctctaaactatcaatatggtactacgaccacttaaatatggtgataccacca 37549918  T
Q  115 tttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatga 209  Q
    ||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37549917 tttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatga 37549818  T
Q  210 tcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggg 306  Q
    ||||||||||||||||||||||||||||||||   |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  37549817 tcttaaaagtactctttattctgaagggacatatattatcgaatggactatg-tttcaagaccattcttaattccgaagggacattaaaccg-aaaaggg 37549720  T
Q  307 actatg 312  Q
    ||||||    
T  37549719 actatg 37549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 26667500 - 26667806
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||| ||||  | ||| |||| || || |||| ||||||||||||||||||    
T  26667500 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctacaaactaccaaaatggtaccacaaccactcaaatatggtgatacca 26667599  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26667600 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 26667699  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  26667700 tgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 26667797  T
Q  304 gggactatg 312  Q
    |||||||||    
T  26667798 gggactatg 26667806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 26939097 - 26939403
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||| ||||  | ||| |||| || || |||| ||||||||||||||||||    
T  26939097 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctacaaactaccaaaatggtaccacaaccactcaaatatggtgatacca 26939196  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26939197 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 26939296  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  26939297 tgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 26939394  T
Q  304 gggactatg 312  Q
    |||||||||    
T  26939395 gggactatg 26939403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 36423865 - 36424171
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  36423865 tggtgctgagaccactcaaatatggtattaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 36423964  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  36423965 ccatttctcctcaaatagaaaaatattgaaatactttttatatatacccttaagatcattattaattccgacggaacattgttattccaaatagggacta 36424064  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  36424065 tgatcttaaaagtactctttattctgaagggacatatattatcgaagagattatg-ttttaagaccattcttaattccgaagggacattaaaccg-aaaa 36424162  T
Q  304 gggactatg 312  Q
    |||||||||    
T  36424163 gggactatg 36424171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 312
Target Start/End: Complemental strand, 37652816 - 37652512
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    |||||||||||||||||||||||||||   | |||||||||||||| ||||| |||  |||||||||| |||||||||| | ||||||||||||||||||    
T  37652816 gtgttgagaccactcaaatatggtgttaatatcattctaactttaagttctctaaactatcaatatggtactacgaccacttaaatatggtgataccacc 37652717  T
Q  114 atttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    |||||||||||||    || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37652716 atttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattattaattccgacgggacattgttattccaaatagggactatg 37652617  T
Q  209 atcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    ||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||    
T  37652616 atcttaaaagtgctctttattctgaagggacatatattatcgaatggactatg-tttcaagaccattcttaattccgaagggacattaaaccg-aaaagg 37652519  T
Q  306 gactatg 312  Q
    |||||||    
T  37652518 gactatg 37652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 12103253 - 12103550
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||    
T  12103253 tggtattgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatggcactgcgactacttaaatatggtgatacca 12103352  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12103353 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacaggatattgttattccaaatagggacta 12103452  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||| ||||||||||| || |   ||||||||||||||| | |||||||| ||||| |||||| ||||||| |||||||||||||    
T  12103453 tgatcttaaaagtactctatattctgaaggcacgtatattatcgaagggacta-ggttttaagatcattcgtaattctgaagggatattaaaccgaaaa 12103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 312
Target Start/End: Original strand, 36428939 - 36429243
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||  |||||||||| | |||||| | ||||||||||||||||||||    
T  36428939 gtgttgagaccactcaaatatgatgttaacaccattctaactttaagttctccaaactatcaatatggtaatacgacaactcaaatatggtgataccacc 36429038  T
Q  114 atttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatg 208  Q
    |||||||||||||    || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36429039 atttctcctcaaatagaaaaatattaaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaataggtactatg 36429138  T
Q  209 atcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagg 305  Q
    ||||||||| |||||||||||||||||||||||   ||||||| | ||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  36429139 atcttaaaaatactctttattctgaagggacatatattatcgacgagactatg-ttttaagaccattcttaattccgaagggacattaaaacg-aaaagg 36429236  T
Q  306 gactatg 312  Q
    |||||||    
T  36429237 gactatg 36429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 35679743 - 35679451
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35679743 tggtgttcagaccactcaaatatggtgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgatcactcaaatatggtgatacca 35679644  T
Q  112 ccatttctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    ||||||||||||||    ||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  35679643 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgcgacattattattccaaaaagggacta 35679544  T
Q  207 tgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattctta---attccgaagggacattaaaccgaaaaa 303  Q
    |||| |||| |||||| ||||||               ||||||||||||||||||||||||||||||||   |||| ||||||||||||||||| ||||    
T  35679543 tgattttaatagtactatttatt---------------tcgaagggactatgtttttaagaccattcttaattattctgaagggacattaaaccg-aaaa 35679460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 88 - 302
Target Start/End: Complemental strand, 9726546 - 9726326
Alignment:
Q  88 gaccattcaaatatggtgataccaccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacggga 182  Q
    ||||| |||||||||||||| ||||||||||||||||||    || || |||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  9726546 gaccactcaaatatggtgattccaccatttctcctcaaataaaaaaatattgaaataattttt-tatatacctttaagatcattcttaattccgacggga 9726448  T
Q  183 cattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaatt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  9726447 cattgttattccaaatagggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatg-ttttaagaccattcttaatt 9726349  T
Q  280 ccgaagggacattaaaccgaaaa 302  Q
    | |||||||||||||||||||||    
T  9726348 ctgaagggacattaaaccgaaaa 9726326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 10759688 - 10759527
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  10759688 tggtgttgagaccactcaaatatgatgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgagcactcaaatacggtgatacca 10759589  T
Q  112 ccatttctcctca-----aaaatatttgaaatactttttatatataccgttaagatcattct 168  Q
    || ||||||||||     ||||   |||||||||||||||||||||||||||||||||||||    
T  10759588 ccttttctcctcaaattgaaaagtattgaaatactttttatatataccgttaagatcattct 10759527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 20180930 - 20180825
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  20180930 tggtgctgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaatatcaatatggtactacgaccactcaaatatggtgatacca 20180831  T
Q  112 ccattt 117  Q
    ||||||    
T  20180830 ccattt 20180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 6513643 - 6513488
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 243  Q
    |||||||| ||||||||||||||||||  ||||||||||| | |||||||| ||||||||||||||||| || ||||||||||| |||||||| |   ||    
T  6513643 tatatacctttaagatcattcttaattatgacgggacattat-attccaaa-agggactatgatcttaatagcactctttattccgaagggacttatatt 6513546  T
Q  244 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaa 301  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6513545 atcggagggactatgtttttaagatcattcttaatttcgaagggacattaaaccgaaa 6513488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 15414597 - 15414503
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat 241  Q
    ||||||| ||||||||||||||| ||||||||| |||||| |||||||||| ||| |||||||||||| |||||||||||||| |||||||||||    
T  15414597 tatatactgttaagatcattcttgattccgacgagacattattattccaaaaaggaactatgatcttacaagtactctttattttgaagggacat 15414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 23757491 - 23757387
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||||||||||||||||||||| |||||||  |||||||||   |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |    
T  23757491 agggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacattata 23757392  T
Q  296 ccgaa 300  Q
    |||||    
T  23757391 ccgaa 23757387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 23822947 - 23822843
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||||||||||||||||||||| |||||||  |||||||||   |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |    
T  23822947 agggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacattata 23822848  T
Q  296 ccgaa 300  Q
    |||||    
T  23822847 ccgaa 23822843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 557133 - 557204
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  557133 atttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 561905 - 561976
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  561905 atttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 561976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 16116115 - 16116011
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||| |||||||||||||||| |||| ||||||||||| |||||| |||| ||||  |||||||||| ||||| |||| ||||||||| ||||||||    
T  16116115 tggtgttaagaccactcaaatatgatgttatcaccattctacctttaagttcttcaaactatcaatatggtactacaaccactcaaatatgatgatacca 16116016  T
Q  112 ccatt 116  Q
    |||||    
T  16116015 ccatt 16116011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 16115962 - 16115871
Alignment:
Q  148 atataccgttaagatcattcttaattccgacgggacattgttattccaaatag-ggactatgatcttaaaagtactctttattctgaaggga 238  Q
    |||||| |||||||||||||||||||| ||| ||||||| ||||| |||| |  ||||||||||||||||||||||||||||||||||||||    
T  16115962 atatactgttaagatcattcttaattctgacaggacattattatttcaaaaaatggactatgatcttaaaagtactctttattctgaaggga 16115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 15414749 - 15414647
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||  ||||||| |||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||| |||||||||| ||||||||||||| |||    
T  15414749 tggtgttatgaccactaaaatatggtgttatcaccattctaacatttaagttcttcaaaatatcaatatggtactacgaccactcaaatatggtgacacc 15414650  T
Q  111 acc 113  Q
    |||    
T  15414649 acc 15414647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 36937166 - 36937097
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36937166 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 36937097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 36941920 - 36941851
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36941920 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccg-aaaagggactatg 36941851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 6513762 - 6513689
Alignment:
Q  43 caccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttc 118  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||| |||||||||  ||||||||||||||    
T  6513762 caccattctaactttcatttctccaaagtatcaatatggcactacgaccactcaaatatg--gataccaccatttc 6513689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 34707393 - 34707299
Alignment:
Q  24 cactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttc 118  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| |||  |||||||||  ||||   ||| |||||||||||||||||||||||||    
T  34707393 cactcaaatatggtgttatcactattctaactttaagttctcaaaactatcaatatgatactaaatccactcaaatatggtgataccaccatttc 34707299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 13301355 - 13301299
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  13301355 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 13301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 7086595 - 7086693
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttct 119  Q
    |||||||||||||||||||| |||||||||||| ||||||  ||||| ||| |||||||||| | ||| | || ||||||||| || |||||||||||||    
T  7086595 gaccactcaaatatggtgttatcaccattctaacctttaacatctcc-aaatatcaatatggtattacaatcactcaaatatgatgctaccaccatttct 7086693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 18265238 - 18265158
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattctta 276  Q
    ||||||||||||||||| | |||||||  ||||||||||||    |||| ||||||||||||||| |||||||||||||||    
T  18265238 agggactatgatcttaagaatactcttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattctta 18265158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 39518861 - 39518919
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  39518861 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 39518919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 39523500 - 39523558
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  39523500 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 39523558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 556918 - 557021
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||     
T  556918 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacg 557015  T
Q  111 accatt 116  Q
    ||||||    
T  557016 accatt 557021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 561690 - 561793
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||     
T  561690 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacg 561787  T
Q  111 accatt 116  Q
    ||||||    
T  561788 accatt 561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 41996883 - 41996986
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||     
T  41996883 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacg 41996980  T
Q  111 accatt 116  Q
    ||||||    
T  41996981 accatt 41996986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 42001652 - 42001755
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||     
T  42001652 tggtgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacg 42001749  T
Q  111 accatt 116  Q
    ||||||    
T  42001750 accatt 42001755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 12044837 - 12044744
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    ||||||||||||||||||| || |||||||||| || ||||||   | || |||||||||||| | ||| |||||||||| ||||||||||||||    
T  12044837 agggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttatgaccattcttgattccgaagggaca 12044744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 12102691 - 12102639
Alignment:
Q  17 ttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaa 69  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| |||||||||    
T  12102691 ttgagaccacttaaatatggtgttaccaccattctaactttaagttctccaaa 12102639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 23688521 - 23688618
Alignment:
Q  207 tgatcttaaaagtactctttattctgaagggacatttatc---gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||| || ||||||||| |||||||||| ||||   ||| ||| |||| | ||||||||||||||||||||| | |||||||| ||||||||    
T  23688521 tgatcttaaaa-tagtctttattccgaagggacatatatcatcgaaaggaatatgctcttaagaccattcttaattccggacggacattataccgaaaa 23688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 31731765 - 31731821
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||| ||  ||||||||||| ||||| ||||||||    
T  31731765 tggtgttgagaccactcaaatatggtattaccaccattctaattttaacttctccaa 31731821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 3666139 - 3666237
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatt 116  Q
    |||||||||||||||||||||||  |||||||||||| | ||| |||||| ||| |||||||||| | | | |||| |||||||||||| ||| ||||||    
T  3666139 tgagaccactcaaatatggtgttaccaccattctaacatctaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgctacaaccatt 3666237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 36937380 - 36937280
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  36937380 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgacc 36937283  T
Q  114 att 116  Q
    |||    
T  36937282 att 36937280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 36942134 - 36942034
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  36942134 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctacgacc 36942037  T
Q  114 att 116  Q
    |||    
T  36942036 att 36942034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 12045011 - 12044907
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacc 110  Q
    |||||||||||||| ||||||||||||||  |||| ||||||  ||||| |||||| ||| |||||||||| | | | |||| |||||||||||| |||     
T  12045011 tggtgttgagaccaatcaaatatggtgttaccacctttctaatttttaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgttacg 12044913  T
Q  111 accatt 116  Q
    ||||||    
T  12044912 accatt 12044907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 32461421 - 32461380
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  32461421 tggtgttgagaccactcaaatatggtgttaccaccattctaa 32461380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 39518880 - 39518962
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| ||||||||  ||  || ||||||||||||| |||||| |  ||||||||||| |||||||||    
T  39518880 ttaagaccattcttaattccgaagggacatt--taaaccgaatagggactatggtcttaagaacactctttattccgaagggaca 39518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 39523519 - 39523601
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| ||||||||  ||  || ||||||||||||| |||||| |  ||||||||||| |||||||||    
T  39523519 ttaagaccattcttaattccgaagggacatt--taaaccgaatagggactatggtcttaagaacactctttattccgaagggaca 39523601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 6155286 - 6155181
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactt--taatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||||||||  || |||| ||| ||  ||| |||||| ||| |||||||||| | | | |||| |||||||||||| |||    
T  6155286 tggtgttgagaccactcaaatatggtgttaccaacattttaattttctaacttctcc-aaatatcaatatggtatttcaaccactcaaatatggtgctac 6155188  T
Q  110 caccatt 116  Q
     ||||||    
T  6155187 gaccatt 6155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 1429868 - 1429827
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  1429868 tggtgctgagaccactcaaatatggtgttaccaccattctaa 1429827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 4872364 - 4872432
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||   |||||| |||||| ||||| |||  |||||||||||| |||||||||||||    
T  4872364 tatcgaagggactatgaacttaagatcattctgaattctgaaaagacattaaaccg-aaaagggactatg 4872432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 13301189 - 13301089
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacattta-tcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    |||||| |||||||||||| || | |||||||| ||| ||||  || | |||||||||||| | ||||||||||||||| ||||||| ||| | ||||||    
T  13301189 agggaccatgatcttaaaa-tattatttattctaaagagacaaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaacc 13301091  T
Q  298 ga 299  Q
    ||    
T  13301090 ga 13301089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 15591007 - 15591060
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||| |||||| || |||| || ||||||||| ||||||||||||||    
T  15591007 atttatcgaagtgactatcttcttaaaactattcttaataccgaagggacatta 15591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21323839 - 21323798
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  21323839 tggtgttgagaccactcaaatatggtgttaccaccgttctaa 21323798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 32461201 - 32461144
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    ||||||||||||||||| | ||||||||||| || ||||||||||  || ||||||||    
T  32461201 ttatcgaagggactatgctcttaagaccattattgattccgaaggatcaataaaccga 32461144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 39518637 - 39518678
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  39518637 tggtgctgagaccactcaaatatggtgttaccaccattctaa 39518678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 39523276 - 39523317
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  39523276 tggtgctgagaccactcaaatatggtgttaccaccattctaa 39523317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 12501766 - 12501738
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgtt 40  Q
    |||||||||||||||||||||||||||||    
T  12501766 tggtgttgagaccactcaaatatggtgtt 12501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 16836027 - 16835722
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16836027 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaacttctccaaaacattaatatggcactacgaccactcaaatatggtgatacca 16835928  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    | ||||||||| |||    || || |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16835927 caatttctccttaaatagaaaaatattgaaata-tttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 16835829  T
Q  207 tgatcttaaaagtactct--ttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16835828 tgaccttaaaagtactctctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccg-aaaag 16835730  T
Q  305 ggactatg 312  Q
    ||||||||    
T  16835729 ggactatg 16835722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 6407728 - 6407425
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||| || ||||||  ||||||| || |||||||||| ||||||||||||||||||    
T  6407728 tggtgctgagaccactcaaatatggtgttaataccattctaactttaagttttccaaactatcaatacggtactacgaccactcaaatatggtgatacca 6407629  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
     ||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6407628 tcatttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactat 6407529  T
Q  208 gatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggga 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6407528 gatcttaaaagtactctttattctgaagggacatttatc-aagggactatgtttttaagaccattcttaattccgaaggaacattaaaccgaaaaaggga 6407430  T
Q  308 ctatg 312  Q
    |||||    
T  6407429 ctatg 6407425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 11560088 - 11559780
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  11560088 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttagtttctccaaaacatcaatatggcactacgaccacttagatatggtgatacca 11559989  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11559988 ccatttctcctcaaatagaaaaatattgaaatactttttataaatactgttaagatcattcttaattccgatgggacattgttattccaaatagggacta 11559889  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||| ||||||||||   ||||| || |||||||||||||||||||||||||||||||||||||||||||||  |||| |    
T  11559888 tgatcttaaaagtactctttattccgaagggacatatattatcaaatggactatgtttttaagaccattcttaattccgaagggacattaaattgaaaga 11559789  T
Q  304 gggactatg 312  Q
    |||||||||    
T  11559788 gggactatg 11559780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 17964426 - 17964127
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||| |||||||||| ||||||||||||||||||    
T  17964426 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatatggtactacgaccactcaaatatggtgatacca 17964327  T
Q  112 ccatttctcctcaaa---aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactat 207  Q
    |||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  17964326 ccatttctcctcaaataaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacgcgacattgttcttccaaatagggactat 17964227  T
Q  208 gatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaag 304  Q
    |||||||||||||||||||||| |||| ||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  17964226 gatcttaaaagtactctttattttgaatggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaagggacattaaaacgaaaaag 17964128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 25314324 - 25314031
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25314324 tggtgttgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 25314225  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaata--gggac 204  Q
    | |||||||||||||    || || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  25314224 ctatttctcctcaaatagaaaaatgttgaaatactttttatata--ccgttaagatcattcttaattccgacgggacattgttattccaaatagggggac 25314127  T
Q  205 tatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    |||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||  ||||| |||||||||    
T  25314126 tatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaacc 25314031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 26201818 - 26201525
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26201818 tggtgttgagaccactcaaatatggtgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 26201719  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaata--gggac 204  Q
    | |||||||||||||    || || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  26201718 ctatttctcctcaaatagaaaaatgttgaaatactttttatata--ccgttaagatcattcttaattccgacgggacattgttattccaaatagggggac 26201621  T
Q  205 tatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    |||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||  ||||| |||||||||    
T  26201620 tatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaacc 26201525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 11570616 - 11570308
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||    
T  11570616 tggtgttaagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatgtcattacgaccacttaaatatggtgatacca 11570517  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatacttttt-atatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggact 205  Q
    |||||||||||||||    || || |||| ||||||||| ||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  11570516 ccatttctcctcaaatagaaaaatattgacatacttttttataaatactgttaagatcattcttaattctga-gggacattgttattccaaatagggact 11570418  T
Q  206 atgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||| || ||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  11570417 atgatcttaaaagtactctttaatccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaatcgaaag 11570318  T
Q  303 agggactatg 312  Q
    ||||||||||    
T  11570317 agggactatg 11570308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 11534578 - 11534270
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| | | ||||||||||||||    
T  11534578 tggtgttgagaccactcaaatatggtgttgccaccattctaactttagtttctccaaaacatcaatatggcactatgaccacttatatatggtgatacca 11534479  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  11534478 ccatttctcctcaaatagaaaaatattgaaatactttttataaatactgttaagatcattcttaatttcgatgggacattgttattccaaatagggacta 11534379  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||| |||||||||  |||||||||   ||||| || |||||||||||||||||||||| ||||||||||||||||||||||  |||| |    
T  11534378 tgatcttaaaagtattctttattcctaagggacatatattatcaaatggactatgtttttaagaccatttttaattccgaagggacattaaattgaaaga 11534279  T
Q  304 gggactatg 312  Q
    |||||||||    
T  11534278 gggactatg 11534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 12689199 - 12689496
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| || |||||    
T  12689199 tggtgttgagaccactcaaatatggtgttgccaccattctaactttaatttctccaaaacatcaatatgacactatgaccactcaaatatgatggtacca 12689298  T
Q  112 ccatttctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    ||||||||||||||    ||| || ||||||||||||||||||||||||||||||||||||  |||   |   | |||||||||||||||||||||||||    
T  12689299 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattccaaataaagggagaacattgttattccaaatagggacta 12689398  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||| |||||||||||| |||||   |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  12689399 tgatcttaaaagtactatttattctgaagagacatatattattgaagggactatg-ttttaagaccattcttaattccgaagggacgttaaaccgaaaa 12689496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 11428237 - 11428436
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11428237 tggtgttgagaccactcaaatatggtgttaccaccattctaactttcatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 11428336  T
Q  112 ccatttctcctcaa----aaatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    ||||||||||||||    ||| || |||||||| ||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  11428337 ccatttctcctcaaatagaaaaatattgaaataatttt--tatataccgttaagatcattcttaattctgacggaacattgttattccaaatagggacta 11428434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 4157236 - 4156924
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||  ||||| |||| ||||||||||||||| ||    
T  4157236 tggtgctgagaccactcaaatatggtgtcaccaccattcaaactttaatttctccaaaacatcaatatgatactaccaccactcaaatatggtgatatca 4157137  T
Q  112 ccatttc--------------tcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcc 194  Q
    |||||||              || ||||   ||||||| |||| | | ||||||||| || ||||||||||||||||||||||||||||||| ||||||     
T  4157136 ccatttccactttttaatttctcttcaattaaaatatt-gaaagaatatttatatatcccattaagatcattcttaattccgacgggacattattattct 4157038  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
    ||| ||||| ||||||||||| | |||||||||||| |||||||| |   |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  4157037 aaaaagggattatgatcttaataatactctttattccgaagggacttatattattgaagtgactatgtttttaagaccattcttaattccgaagggacat 4156938  T
Q  292 taaaccgaaaaagg 305  Q
    ||||||||||||||    
T  4156937 taaaccgaaaaagg 4156924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 2699974 - 2699658
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||| |     
T  2699974 tggtgctgagaccactcaaatacggtgttgccaccattctaactttaatttttctaaaatatcaatatgacactacgaccattcaaatatggtgatatcg 2699875  T
Q  112 ccatttc--------------tcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcc 194  Q
    |||||||              |||||||   ||||||| |||| | | |||||||||  ||||||||||||||||||||| ||||||||||| ||||| |    
T  2699874 ccatttccactttttaatatctcctcaattaaaatatt-gaaagaatatttatatat--cgttaagatcattcttaattctgacgggacattattatttc 2699778  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
     || ||||||||||||||||| |||||||||||||| ||||| || |   ||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  2699777 gaaaagggactatgatcttaatagtactctttattccgaaggaacttatattatcgaagggactatgtttttaagattattcttaattctgaagggacat 2699678  T
Q  292 taaaccgaaaaagggactatg 312  Q
    ||||||| |||||||||||||    
T  2699677 taaaccg-aaaagggactatg 2699658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 33687360 - 33687211
Alignment:
Q  165 ttcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgttt 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||   ||||||||| ||||||| ||    
T  33687360 ttcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattccgaaggaacatatattatcgaagagactatg-tt 33687262  T
Q  262 ttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  33687261 ttaagaccatacttaattgcgaagggacattaaaccgaaaaagggactatg 33687211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 19995264 - 19994977
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    ||||||| ||||| || ||||||  || |||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  19995264 tgagacccctcaactacggtgttaccatcattctaactttaagttctccaaaatatcaatatggtactacgaccactcaaatatggtgataccaccattt 19995165  T
Q  118 c--------------tcctcaaaaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaataggga 203  Q
    |              |||||||||||||| |||  |  |||    |||||  |||||||||||||||||||  ||   ||||| || ||||||| |||||    
T  19995164 cgactttttaatttctcctcaaaaatattggaagaatatttg---tatacatttaagatcattcttaattcgtacaaaacattattgttccaaa-aggga 19995069  T
Q  204 ctatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||| |||| ||||||||||||||||||||||||   |||| ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  19995068 ctatgatcctaaa-gtactctttattctgaagggacatacattatagaagggactatgtttttaaaacctttcttaattctgaagggacatta 19994977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 22695036 - 22694883
Alignment:
Q  149 tataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttat 245  Q
    ||||| ||||||||||||||||||| |||||||||||| || || |||| |||||||||||||||||||||||||||||||| |||||| |||   ||||    
T  22695036 tatactgttaagatcattcttaatttcgacgggacattattgtttcaaa-agggactatgatcttaaaagtactctttattccgaaggggcatacattat 22694938  T
Q  246 cgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
     ||| | ||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  22694937 tgaatgaactatgtttttaagacctttcttaattcttaagggacattataccgaa 22694883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 5856235 - 5856341
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||  |||||||||||| |||||||| ||||||||||||||||||    
T  5856235 tggtgttaagaccactcaaatatggtgttaccaccattctaactttaatttttccaaagtatcaatatggcattacgaccactcaaatatggtgatacca 5856334  T
Q  112 ccatttc 118  Q
    |||||||    
T  5856335 ccatttc 5856341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 12406220 - 12406115
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||| |||||||||||||| ||||  ||| ||| |||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||| |    
T  12406220 tggtgctgataccactcaaatatgatgttaccactattttaactttaatttctccaaactatcaatatggtactacgaccactcaaatatggtgatacta 12406121  T
Q  112 ccattt 117  Q
    ||||||    
T  12406120 ccattt 12406115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 20747974 - 20747883
Alignment:
Q  205 tatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||| || ||||||||| ||||||||||   ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  20747974 tatgatcttaaaaatattctttattccgaagggacatatattatcaaagggactatgtttttaagatcattcttaattccgaagggacatta 20747883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 11613624 - 11613527
Alignment:
Q  20 agaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttc 118  Q
    ||||| |||||||||||||||  ||||||||||||||| | |||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||||    
T  11613624 agacctctcaaatatggtgttaccaccattctaactttgagttctccaaaatatcaatatagc-ctacgaccactcaattatggtgataccaccatttc 11613527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 29892116 - 29892032
Alignment:
Q  24 cactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgata 108  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||  |||||||||| |||||||||| |||||||| ||||||    
T  29892116 cactcaaatatggtgttaccaccattctaaatttaatttctccaaactatcaatatggtactacgaccactcaaatatagtgata 29892032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 11428427 - 11428490
Alignment:
Q  249 agggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  11428427 agggactatgtttttaagatcattattaattccgaaggaacattaaaccgaaaaagggactatg 11428490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 17599742 - 17599883
Alignment:
Q  155 gttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagg 251  Q
    |||||||||||||||||||  || | |||||| || ||  ||| ||||| ||| ||||||||||||||||| ||| |||| ||||||   |||||||       
T  17599742 gttaagatcattcttaattatgaagtgacattattgttttaaaaagggattataatcttaaaagtactcttcattttgaatggacatacattatcgattt 17599841  T
Q  252 gactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  17599842 gactatgtttttaaaacctttcttaattccgaagggacatta 17599883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 285
Target Start/End: Original strand, 5856383 - 5856523
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaata-gggactatgatcttaaaagtactctttattctgaagggacat---t 242  Q
    |||||||| ||||||| ||| |||||| ||| | |||||| |||||||||| | |||||||||| ||||| | || ||||||||  |||||||| |   |    
T  5856383 tatataccattaagattatt-ttaatttcgatgagacattattattccaaaaaagggactatgaacttaata-tattctttatttcgaagggacttatat 5856480  T
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaag 285  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  5856481 tatcgaagggactatgtttttaagaccattcttaatttcgaag 5856523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 12406060 - 12405987
Alignment:
Q  155 gttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttatt 229  Q
    |||||| |||||||||||| |||||||||||| || ||||||| ||||||||||||||||||| |||||||||||    
T  12406060 gttaagctcattcttaatttcgacgggacattattgttccaaa-agggactatgatcttaaaaatactctttatt 12405987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 22609958 - 22610068
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacatt-------tatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
    ||||||||||||||||||| || ||||||||| ||||  |||||       |||||||| ||||||| | |||| ||||||||||||||||||| |||||    
T  22609958 agggactatgatcttaaaattattctttattccgaagaaacattaaatatatatcgaagagactatgctcttaaaaccattcttaattccgaagtgacat 22610057  T
Q  292 taaaccgaaaa 302  Q
    || ||||||||    
T  22610058 tataccgaaaa 22610068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 22695172 - 22695088
Alignment:
Q  30 aatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacca 114  Q
    ||||||||||   ||||||||||||||||| |||||||||  ||||| |||  ||||| |||| |||||||||||||||||||||    
T  22695172 aatatggtgtcaccaccattctaactttaagttctccaaactatcaacatgatactacaaccactcaaatatggtgataccacca 22695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 6112826 - 6112724
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccac 112  Q
    ||||| ||||||||||||||||||||| ||||||||||||  ||||| |||||| ||| |||||||||| ||| | | ||||||||||| ||| ||| ||    
T  6112826 gtgttaagaccactcaaatatggtgttatcaccattctaatttttaacttctcc-aaatatcaatatggtacttcaagcattcaaatatagtgctacgac 6112728  T
Q  113 catt 116  Q
    ||||    
T  6112727 catt 6112724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 14042005 - 14042102
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||| ||||||||| | |||||||  ||  |||||||||   |||| |||||| |||||||| |||||||||||||||||| |||||||||||||    
T  14042005 agggactttgatcttaagaatactcttattttcgaagggacaaaatttaccgaaggaactatgttcttaagaccattcttaatttcgaagggacatta 14042102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 35130031 - 35130084
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  35130031 atttaccgaagagactatgttcttaagaccattcttaattccgaatggacatta 35130084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 11613474 - 11613411
Alignment:
Q  155 gttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagt 219  Q
    |||||||||||||||||||| ||||| ||||| || ||||||| || ||||||||||||||||||    
T  11613474 gttaagatcattcttaattctgacggaacattattgttccaaa-agtgactatgatcttaaaagt 11613411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 17913825 - 17913881
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||| |||||| ||||| | |||||||||||||||| ||||||||    
T  17913825 tggtgttgagaccacttaaatatagtgttattaccattctaactttaagttctccaa 17913881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 5856533 - 5856580
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggac 289  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||    
T  5856533 ttatcgaagggactatgtttttaagaacactcttaatttcgaagggac 5856580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 17914051 - 17914110
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||    
T  17914051 tatcaaagggactatgcacttaagaccattcttaattccgaagggacattatatcgaaaa 17914110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 14509435 - 14509503
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||   ||||||| ||||||||||| ||||| ||||||||| | |||||||||||||    
T  14509435 tatcgaagggactatgaacttaagactattcttaattctgaaggtacattaaactg-aaaagggactatg 14509503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 2699720 - 2699626
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacatttatcg---aagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    |||||||||| | |||| | || |||| |||||||||||||||| | |    ||||||||||| |||||||| || |||||||||||||||||||    
T  2699720 agggactatgtttttaagattattcttaattctgaagggacattaaaccgaaaagggactatggttttaagaacactcttaattccgaagggaca 2699626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22609797 - 22609841
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactt 56  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  22609797 tggtgctgagaccactcaaatatggtgttaccaccattctaactt 22609841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 33687430 - 33687394
Alignment:
Q  89 accattcaaatatggtgataccaccatttctcctcaa 125  Q
    |||| ||||||||||||||||||||||||||||||||    
T  33687430 accactcaaatatggtgataccaccatttctcctcaa 33687394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 24588831 - 24588776
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||| |||| | |||||||||||||| |||||||||||||| || ||||||||    
T  24588831 gaagggattatgctcttaagaccattcttgattccgaagggacaatataccgaaaa 24588776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 32001859 - 32001774
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattcc 281  Q
    ||||||||||||| ||||| ||||  ||||| ||||| || ||   |||||||||| |||||||| ||| ||||||||||||||||    
T  32001859 agggactatgatcgtaaaaatactaattattttgaagagatataaattatcgaaggaactatgttcttacgaccattcttaattcc 32001774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 14575063 - 14575113
Alignment:
Q  262 ttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||| |||||| |||||||||||||||||| |||  |||||||||||||    
T  14575063 ttaagatcattctaaattccgaagggacattatacctcaaaagggactatg 14575113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 8748005 - 8748046
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||| ||||||||||||||  |||||||||||    
T  8748005 tggtgttgagaccattcaaatatggtgttaccaccattctaa 8748046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 14509212 - 14509269
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaact-ttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  |||  |||||| | |||||||||||||    
T  14509212 tggtgttgagaccactcaaatatggtgttaccacttttctaattattaatttctccaa 14509269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 2863256 - 2863224
Alignment:
Q  22 accactcaaatatggtgttgtcaccattctaac 54  Q
    ||||||||||||||||||| |||||||||||||    
T  2863256 accactcaaatatggtgttatcaccattctaac 2863224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 5496272 - 5496324
Alignment:
Q  240 atttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||| |||||| |||||| | ||||||||||| |||||||| ||||||||||    
T  5496272 atttaccgaaggaactatgctcttaagaccatttttaattccaaagggacatt 5496324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 7332 - 7638
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7332 tggtgttgataccacttaaatattgtgttgccaccattctaactttaatttctccaaaacatcaatatgacactacgaccactcaaatatggtgatacca 7431  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7432 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattctgacgggacattgttattccaaatagggacta 7531  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    ||||||||||||||||||||||||||||| |||||   ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  7532 tgatcttaaaagtactctttattctgaagagacatatattatcgaagggactatg-ttttaagaccattcttaatttcgaagggacattaaaccg-aaaa 7629  T
Q  304 gggactatg 312  Q
    |||||||||    
T  7630 gggactatg 7638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 36683807 - 36684104
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36683807 tggtgttgagaccactcaaatatggtcttgccaccattctaactttaatttctccaaaagatcaatatggcactacgaccactcaaatatggtgatacca 36683906  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  36683907 ccatttctcctcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattatgacgggacattgttattccaaatagggacta 36684006  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||||||||||||||||||||||    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  36684007 tgatcttaaaagtactctttattctgaagggacatataatatcgaatggactatg-ttttaagaccactcttaattccgaagggacattaaaccgaaaa 36684104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 44925791 - 44925494
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44925791 tggtgtcgagaccactcaaatatggttttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 44925692  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  44925691 ccatttctcctcaaatagaaaaatattgaaatactttttatatatactgttaaaatcattcttatttccgacgggacattgttaatccaaatagggacta 44925592  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||||||||||||||| ||||||||||||||||||   ||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  44925591 tgatcttaaaagtactatttattctgaagggacatatattatcgaaggggctatg-ttttaagaccattcttaattccgaagggacattgaaccgaaaa 44925494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 289
Target Start/End: Original strand, 33416774 - 33417057
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33416774 tggtgttgagaccactcaaatatgatgttaccaccattctaactttaatttctccaaaacatcaatatggcactacgaccactcaaatatggtgatacca 33416873  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacatt-gttattccaaatagggact 205  Q
    |||||| |||| |||    || || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  33416874 ccatttatccttaaatagaaaaatattgaaatactttttatatataccgttaaaatcattcttaatttcgacgggacatttgttattccaaatagggact 33416973  T
Q  206 atgatcttaaaagtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggac 289  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33416974 atgatcttaaaagtactctttattctgaggagacatttatcgaagggactatgtttttaagaccattcttaatttcgaagggac 33417057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 302
Target Start/End: Original strand, 1807685 - 1807969
Alignment:
Q  22 accactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatttctcc 121  Q
    ||||||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| || || | ||||||||||||||||||||||||||||    
T  1807685 accactctattatggtgttgccaccattctaactttaatttatccaaaacatcaatatggcac-acaacgactcaaatatggtgataccaccatttctcc 1807783  T
Q  122 tcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaa 216  Q
    |||||    || || ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  1807784 tcaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaatttttacgggacattgttattccaaatagggactatgatcttaaa 1807883  T
Q  217 agtactctttattctgaagggacatttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  1807884 agtaatctttattctgaagggacatttatcgaagggacaatgtttttaagaccattcttaattccgaatggacattaaaccgaaaa 1807969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 15951422 - 15951115
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||| ||| |||||||||| |||||||| |||||||||    
T  15951422 tggtgctgagaccactcaaatatggtgttaacaccattctaactttaagttctccaaactatcaatttggtactacgaccactcaaatatagtgatacca 15951323  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |  |||||||| |||    || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15951322 ctgtttctccttaaatagaaaaatattgaaatactttttatatataccgttaagatcattcttaattccgacggaacattgttattccaaatagggacta 15951223  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15951222 tgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgttttaaagaccattcttaattccgaagggacattaaaccg-aaaa 15951124  T
Q  304 gggactatg 312  Q
    |||||||||    
T  15951123 gggactatg 15951115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 18876256 - 18875961
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  18876256 tggtgttgagaccactcaaatatgttgttgccaccattctaactttaatttctccaaaacatcaatatggcactacaaccactcaaatatggcgatacca 18876157  T
Q  112 ccatttctcctcaaa-----aatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    | |||||| ||||||     || | |||||| | | ||||||||   ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  18876156 caatttctgctcaaatagaaaaaaattgaaagaatatttatatag--cgttaagatcattcttaattccgacgggacattattattccaaa-agggacta 18876060  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||| | |||||||||||| |||||||| |   |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18876059 tgatcttaatattactctttattccgaagggacttatattatcggagtgactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaa 18875961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 38182123 - 38181807
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||  ||    
T  38182123 tggtgttgagaccactcaaatatggtgttaccactattcaaactttaatttctccaaagtatcaatatggcactacgaccactcaaatatggtgatctca 38182024  T
Q  112 ccattt--------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcc 194  Q
    ||||||              ||||||||   ||||| | |||| | | ||||||||  |||||||||||||| ||||||||||||||||||| |||||||    
T  38182023 ccatttcaactttttaatttctcctcaatttaaataat-gaaagaatatttatata--ccgttaagatcatttttaattccgacgggacattattattcc 38181927  T
Q  195 aaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacat 291  Q
    ||| | |||||||||||||||  ||||||||||||| |||||||| |   ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  38181926 aaaaaaggactatgatcttaatggtactctttattccgaagggacttatattatcgaagagactatgtttttaagaccatttttaattccgaagggacat 38181827  T
Q  292 taaaccgaaaaagggactatg 312  Q
    ||||||| |||||||||||||    
T  38181826 taaaccg-aaaagggactatg 38181807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 12 - 312
Target Start/End: Original strand, 19166862 - 19167178
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||    
T  19166862 tggtgttgagaccactcatatatggtgttaccaccattctaactttaatttctccaaaactacaatatggcattacgaccactcaaatatggtgatacca 19166961  T
Q  112 ccatttct--------------cctcaa--aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattcca 195  Q
    ||||||||              ||||||  |||   |||||| | | ||||||  |||||||||||||||||||| ||||| | | ||||| ||||| ||    
T  19166962 ccatttcttctttttaatttctcctcaattaaagtattgaaagaatatttata--taccgttaagatcattcttatttccggcagaacattattatttca 19167059  T
Q  196 aatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    || ||||||||||||||||| |||||||||||||| |||||||| |   |||||||| | |||||||||| |||||||||||||||||||||||| ||||    
T  19167060 aaaagggactatgatcttaatagtactctttattccgaagggacttatattatcgaatgaactatgttttaaagaccattcttaattccgaagggtcatt 19167159  T
Q  293 aaaccgaaaaagggactatg 312  Q
    |||||| |||||||||||||    
T  19167160 aaaccg-aaaagggactatg 19167178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 17020572 - 17020876
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| ||||  ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  17020572 tgagaccactcaaacatggtgttaccaccattctaactttaatttcttcaaagtatcaatatggcactatgaccacttaaatatggtgataccaccattt 17020671  T
Q  118 --------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatag 200  Q
                  ||||||||   ||||||  |||| | | ||||||  |||||||||||||||||||||||| | ||| ||||| |||||||||| ||    
T  17020672 ccactttttaatttctcctcaattaaaatatc-gaaagaatatttata--taccgttaagatcattcttaattctggcggaacattattattccaaaaag 17020768  T
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    |||| |||||||||| ||||||||||||| ||||||| | |   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17020769 ggacaatgatcttaatagtactctttattttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaacc 17020868  T
Q  298 gaaaaagg 305  Q
    || |||||    
T  17020869 gagaaagg 17020876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 17551009 - 17551313
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| ||||  ||||||||||||||| ||||| | ||||||||||||||||||||||    
T  17551009 tgagaccactcaaacatggtgttaccaccattctaactttaatttcttcaaagtatcaatatggcactatgaccacttaaatatggtgataccaccattt 17551108  T
Q  118 --------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatag 200  Q
                  ||||||||   ||||||  |||| | | ||||||  |||||||||||||||||||||||| | ||| ||||| |||||||||| ||    
T  17551109 ccactttttaatttctcctcaattaaaatatc-gaaagaatatttata--taccgttaagatcattcttaattctggcggaacattattattccaaaaag 17551205  T
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    |||| |||||||||| ||||||||||||| ||||||| | |   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17551206 ggacaatgatcttaatagtactctttattttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaacc 17551305  T
Q  298 gaaaaagg 305  Q
    || |||||    
T  17551306 gagaaagg 17551313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 1910836 - 1910519
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgat-acc 110  Q
    ||||| |||||||||||||||||| ||||  ||||||||| |||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || |||    
T  1910836 tggtgctgagaccactcaaatatgatgttaccaccattctgactttaatttctccaaagtatcaatatgacactacgaccactcaaatatggttattacc 1910737  T
Q  111 accattt--------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattc 193  Q
    |||||||              |||||| |   ||||||| |||| | | ||||||||  |||||||| ||||||||||||||||||||||||| ||||||    
T  1910736 accatttccacttttaaatttctcctcgattaaaatatt-gaaagaatatttatata--ccgttaaggtcattcttaattccgacgggacattattattc 1910640  T
Q  194 caaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
     ||| ||||||||||||||||| |||||||||||||  |||||||| |   |||||||| |||||||||||||||||||||||||||||  |||||||||    
T  1910639 aaaaaagggactatgatcttaatagtactctttatttcgaagggacttatattatcgaatggactatgtttttaagaccattcttaattatgaagggaca 1910540  T
Q  291 ttaaaccgaaaaagggactatg 312  Q
    |||||||| |||||||||||||    
T  1910539 ttaaaccg-aaaagggactatg 1910519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 26779492 - 26779631
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaaggg 252  Q
    |||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||| ||||||  ||||||||||   || |||||| |    
T  26779492 ttaagatcattcttaattccgacgagacattatttttccaaa-agggactatgatcttaaaagtactttttatttcgaagggacatacattgtcgaagag 26779590  T
Q  253 actatgtttttaagaccattcttaattccgaagggacatta 293  Q
    ||||||||||||| ||  |||||||||||||||||||||||    
T  26779591 actatgtttttaaaacatttcttaattccgaagggacatta 26779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 28559532 - 28559427
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  28559532 tggtgctgagaccactcaaatatggtgttaccaccattctaactttaatt-ctccaaaatatcaatatgacactacgaccactcaaatatggtgatacca 28559434  T
Q  112 ccatttc 118  Q
    |||||||    
T  28559433 ccatttc 28559427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 300
Target Start/End: Complemental strand, 23548497 - 23548190
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||| ||||||| || |||||||| |||||| ||||| ||||||||| ||||||||    
T  23548497 tggtgttgagatcactcaaatatggtgttaccaccattcgaactttaagttctccataatatcaatatcgcactatgaccactcaaatatgatgatacca 23548398  T
Q  112 cc--------------atttctcctcaaaaatat-----ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttatt 192  Q
    ||              ||||||||||||| | |      |||||| | | |||||| |  | ||||||||||||||||||||||||  |||||| || ||    
T  23548397 ccatttcgactttttaatttctcctcaaatagaaaactattgaaagaatatttataaa--ctgttaagatcattcttaattccgacaagacattattgtt 23548300  T
Q  193 ccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggac 289  Q
    ||||| ||||||||| |||||||||||| ||||||||  |||| |||||   |||||||| | ||||||||||||||| | ||||||| ||| ||| |||    
T  23548299 ccaaa-agggactataatcttaaaagtattctttattacgaagcgacatacattatcgaatgtactatgtttttaagatctttcttaactccaaagagac 23548201  T
Q  290 attaaaccgaa 300  Q
    |||| ||||||    
T  23548200 attataccgaa 23548190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 28564687 - 28564582
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  28564687 tggtgctgagaccactcaaatatggtgttaccaccattttaactttaatt-ctccaaaatatcaatatggcactacgaccactcaaatatgctgatacca 28564589  T
Q  112 ccatttc 118  Q
    | |||||    
T  28564588 ctatttc 28564582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 28572310 - 28572205
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  28572310 tggtgctgagaccactcaaatatggtgttaccaccattttaactttaatt-ctccaaaatatcaatatggcactacgaccactcaaatatgctgatacca 28572212  T
Q  112 ccatttc 118  Q
    | |||||    
T  28572211 ctatttc 28572205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 22714712 - 22714566
Alignment:
Q  157 taagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaaggga 253  Q
    ||||||||||||||||| ||| |||| ||| |||||||||| ||||| |||||||||||||||||||||||| | ||||| ||||   |||||||| |||    
T  22714712 taagatcattcttaatttcgatgggatattattattccaaaaagggagtatgatcttaaaagtactctttatcccgaaggaacatacattatcgaatgga 22714613  T
Q  254 ctatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    ||||||| |||||||| ||  || |||| ||||||||||| ||||||    
T  22714612 ctatgttcttaagacctttactacttccaaagggacattataccgaa 22714566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 144 - 293
Target Start/End: Original strand, 18260199 - 18260353
Alignment:
Q  144 ttatatataccgttaagatcattcttaattccgacgggacattgttattcc--aaatagggactatgatcttaaaagtactctttattctgaagggacat 241  Q
    ||||||||||  || ||||||||||||||||||| |||||||| ||||||   ||| | |||||||||||||||||||| | ||||||| ||| ||||||    
T  18260199 ttatatatactattgagatcattcttaattccgaagggacattattattcataaaaaatggactatgatcttaaaagtattttttattccgaaaggacat 18260298  T
Q  242 ---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
       |||||||| | |||||||||||||| |||||||||||||| ||| |||||||    
T  18260299 aagttatcgaatgaactatgtttttaaggccattcttaattccaaagagacatta 18260353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 300
Target Start/End: Complemental strand, 24673042 - 24672898
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaaggg 252  Q
    |||| |||||||||||||||||| |||||||  ||||||||| ||| |||  | |||||||| |||||||||||||||||||||||   |||||||| |     
T  24673042 ttaacatcattcttaattccgactggacattactattccaaaaagg-act--ggtcttaaaaatactctttattctgaagggacatatattatcgaatga 24672946  T
Q  253 actatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    |||||||| || ||||| |||||||||| |||||||||||| ||||||    
T  24672945 actatgttctttagacctttcttaattctgaagggacattataccgaa 24672898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 2966014 - 2966106
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggac 239  Q
    ||||||| ||||| ||||||||||||| |||||||||||| || || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  2966014 tatatactgttaaaatcattcttaatttcgacgggacattattgtttcaaaaaaggactatgatcttaaaaatactttttattctgaagggac 2966106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 31449520 - 31449460
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaa 302  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  31449520 ttatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaa 31449460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 19954634 - 19954730
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    |||||||||| |||||| | |||||||  |||||||||||||   |||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  19954634 agggactatgctcttaagaatactcttatttctgaagggacaaattttaccgaagggactatgttcttaagaccattctttattccgaagggacatt 19954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 4237995 - 4237927
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  4237995 tatcgaagggactatgctgttaagatcattcttaattccgaagggacattaaaccg-aaaagggactatg 4237927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 4242734 - 4242666
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  4242734 tatcgaagggactatgctgttaagatcattcttaattccgaagggacattaaaccg-aaaagggactatg 4242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 24673194 - 24673097
Alignment:
Q  20 agaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccatt 116  Q
    |||||||||||||||| |||| ||||||||| ||| ||||| |||| ||||| | |||||||| |||||||||| | |||||||||||||||||||||    
T  24673194 agaccactcaaatatgatgttatcaccattccaacctttaagttcttcaaaataacaatatggtactacgaccacttaaatatggtgataccaccatt 24673097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 2470337 - 2470433
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||||| |||||||  || |||||||||    |||| ||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  2470337 agggactatgatcttaaaaatactcttatttttgaagggacgaattttaccgaaggggctatgttcttaagaccattcttaattcagaagggacatt 2470433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 2965858 - 2965964
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||| ||||||||||| ||||  ||||||| |||| |||| ||||| ||   ||| |||||| |||||| ||| ||||||||||||||||||    
T  2965858 tggtgttgagactactcaaatatgatgttaccaccattttaacgttaagttctctaatctatcgatatggtactacgcccactcaaatatggtgatacca 2965957  T
Q  112 ccatttc 118  Q
    |||||||    
T  2965958 ccatttc 2965964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 28564527 - 28564461
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtact 222  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||| ||||||||||||| ||||||    
T  28564527 ttaagatcattcttaatttcgacgggacattattattccaaaaaggaactatgatcttaatagtact 28564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 17793696 - 17793797
Alignment:
Q  17 ttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccat 115  Q
    |||||||| |||||||||| |||| ||| ||||||||| ||||| |||||| ||| ||| |||||| ||| | |||||||||||||||| ||||||||||    
T  17793696 ttgagacctctcaaatatgatgttatcatcattctaacctttaacttctcctaaatatcgatatggtactgcaaccattcaaatatggttataccaccat 17793795  T
Q  116 tt 117  Q
    ||    
T  17793796 tt 17793797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 17953607 - 17953542
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggac 308  Q
    |||||||||||||||| | ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  17953607 tatcgaagggactatgctcttaagaccattcttaatttggaagggacattataccgaaaaagggac 17953542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 19950182 - 19950276
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||| | |||||||  |||||| ||||||   |||| ||||||||||||||| |||||||||||||| |||||||| |||||||    
T  19950182 ggactatgatcttaagaatactcttatttctgatgggacaaattttaccgaagggactatgttcttaagaccattctttattccgaatggacatt 19950276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 310
Target Start/End: Complemental strand, 15875416 - 15875261
Alignment:
Q  156 ttaagatcattcttaattc-cgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatt----tatcgaag 250  Q
    ||||||||||||||||||  ||| |||||||| |||  || || ||||||||||||||||||| || | ||||||||||||||||||     |||| |||    
T  15875416 ttaagatcattcttaattttcgaagggacatt-tta--ccgaaaagggactatgatcttaaaa-tattatttattctgaagggacataaaaatatcaaag 15875321  T
Q  251 ggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggacta 310  Q
    |||||||  | |||| |||||| ||||||||||||||| |||| ||||||||| ||||||    
T  15875320 ggactatactcttaataccatttttaattccgaagggagattataccgaaaaaaggacta 15875261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 4544026 - 4543931
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggaca---tttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||| | |||| ||  ||||||||||||    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  4544026 agggactatgatcttaagaatacttttatttctgaagggacgaattttaccgaagggactatgttcttaagaccattctt-attccgaagggacatt 4543931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 312
Target Start/End: Original strand, 7002013 - 7002184
Alignment:
Q  145 tatatataccgttaagatcattcttaattccgacgggacattgttattccaaatag----ggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    ||||||||  |||||||||||||||||||   | ||||||||||||||||||| |     ||||||||||||||||| || | |||||||  ||||||||    
T  7002013 tatatatatagttaagatcattcttaatt---atgggacattgttattccaaaaaaaaaaggactatgatcttaaaaatattttttattccaaagggaca 7002109  T
Q  241 t---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |   ||||| |||||||||||   |||||| ||||||| |||||||||| || ||| | ||||||| | ||||||    
T  7002110 taaattatcaaagggactatgcccttaagatcattcttgattccgaaggaacgttatatcgaaaaaagaactatg 7002184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 25367853 - 25367797
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  25367853 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 25367797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 17026390 - 17026448
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  17026390 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 17026448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 17556882 - 17556940
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  17556882 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 17556940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 26779333 - 26779429
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttct-ccaaaacatcaatatggcactac--gaccattcaaatatggtgataccac 112  Q
    ||||||||||||||||||||| |  ||||||| ||||||||| |||| | |||| || |||||||||||||  ||||| |||||||||||||||||||    
T  26779333 tgagaccactcaaatatggtgct-acaccattttaactttaacttctgcaaaaatattaatatggcactacgggaccactcaaatatggtgataccac 26779429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 40125528 - 40125479
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||    
T  40125528 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatt 40125479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 31449738 - 31449633
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||||||||  |||||||||||   ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||    
T  31449738 tggtgttgagaccactcaaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctac 31449641  T
Q  110 caccattt 117  Q
     |||||||    
T  31449640 gaccattt 31449633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 34818572 - 34818516
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||| |||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  34818572 tggtgttgtgaccactcaaatatggtgctaccaccattctaactttaacttctccaa 34818516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 4238210 - 4238110
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  4238210 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgttacgacc 4238113  T
Q  114 att 116  Q
    |||    
T  4238112 att 4238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 4242949 - 4242849
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| ||| |||    
T  4242949 tgttgagaccactcaaatatggtgttaccaccattctaatttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgttacgacc 4242852  T
Q  114 att 116  Q
    |||    
T  4242851 att 4242849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 5884382 - 5884470
Alignment:
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 292  Q
    |||| ||||||||||||||||||  ||||||||||   ||||||||| || |||| | |||||||||||||||  | ||||||||||||    
T  5884382 tgatattaaaagtactctttatttcgaagggacataaattatcgaagagaatatgctcttaagaccattcttagcttcgaagggacatt 5884470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 17793852 - 17793926
Alignment:
Q  158 aagatcattcttaattccgacgggacattgttattcc-aaatagggactatgatcttaaaagtactctttattct 231  Q
    ||||||||||||| ||| ||  ||||||| ||||||| ||| | |||||||||||||||||||||| ||||||||    
T  17793852 aagatcattcttagttctgaaaggacattattattcctaaaaatggactatgatcttaaaagtactttttattct 17793926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 2966099 - 2966152
Alignment:
Q  247 gaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaa 300  Q
    ||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||||    
T  2966099 gaagggactatgtttttaagaccgttcttaattctgaagagacgttataccgaa 2966152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 8331222 - 8331174
Alignment:
Q  20 agaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  8331222 agaccactcaaatatggtgttaccaccattctaattttaacttctccaa 8331174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 28559334 - 28559282
Alignment:
Q  170 aattccgacgggacattgttattccaaatagggactatgatcttaaaagtact 222  Q
    |||| |||||||||||| |||||||||| ||| ||||||||||||| ||||||    
T  28559334 aatttcgacgggacattattattccaaaaaggaactatgatcttaatagtact 28559282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 28559373 - 28559333
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaa 196  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  28559373 ttaagatcattcttaatttcgacgggacattattattccaa 28559333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 28572150 - 28572110
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaa 196  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  28572150 ttaagatcattcttaatttcgacgggacattattattccaa 28572110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 37771933 - 37771989
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||| | ||  ||||||||||| ||||| ||||||||    
T  37771933 tggtgttgagaccactcaaatatgatattaccaccattctaattttaacttctccaa 37771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 43302386 - 43302293
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggaca 290  Q
    ||||||||||||||||||| || |||||||||| || ||||||   | || |||||||||||| | ||||||||||| || |||||||| |||||    
T  43302386 agggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattattgattccgaatggaca 43302293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 17026163 - 17026204
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  17026163 tggtgctgagaccactcaaatatggtgttaccaccattctaa 17026204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 17026409 - 17026491
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| |||||||  |||  || ||||||||||||| |||||| |  |||||| |||| |||||||||    
T  17026409 ttaagaccattcttaattccgaagggacat--ttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggaca 17026491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 17556655 - 17556696
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  17556655 tggtgctgagaccactcaaatatggtgttaccaccattctaa 17556696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 17556901 - 17556983
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| |||||||  |||  || ||||||||||||| |||||| |  |||||| |||| |||||||||    
T  17556901 ttaagaccattcttaattccgaagggacat--ttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggaca 17556983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 299
Target Start/End: Original strand, 37772099 - 37772201
Alignment:
Q  199 agggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaa 295  Q
    |||||| |||||||||||| || | |||||||| ||| |||||   | || |||||||||||| | ||||||||||||||| ||||||| ||| | ||||    
T  37772099 agggaccatgatcttaaaa-tattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaa 37772197  T
Q  296 ccga 299  Q
    ||||    
T  37772198 ccga 37772201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 40125753 - 40125712
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  40125753 tggtgctgagaccactcaaatatggtgttaccaccattctaa 40125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 27415926 - 27415966
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat 241  Q
    |||||||||||||||||||||| ||| ||||||||| ||||    
T  27415926 ggactatgatcttaaaagtactatttgttctgaaggaacat 27415966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 443813 - 443507
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  443813 tggtgttgagaccactaaaatatggtgtttccaccattctaactttaatttctccaaaacatcaatatggcactacgaccacttaaatatggtgatacca 443714  T
Q  112 ccatttctcctcaaa----aatat-ttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggacta 206  Q
    |||||||||||||||    || || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  443713 ccatttctcctcaaatagaaaaatattgaaatactttttatatgtaccgttaagatcattcttaattccaacgggacattgttattccaaatagggacta 443614  T
Q  207 tgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaa 303  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||    
T  443613 tgattttaaaagtactctttattctgaagggacatatattatcgaagggactatg-ttttaagaccattcttaattccgaaggaacattaaactg-aaaa 443516  T
Q  304 gggactatg 312  Q
    |||||||||    
T  443515 gggactatg 443507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 4526 - 4584
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggaca-ttaaaccgaa 300  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  4526 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaa 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 4301 - 4342
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  4301 tggtgctgagaccactcaaatatggtgttaccaccattctaa 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 4545 - 4627
Alignment:
Q  156 ttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggaca 240  Q
    |||||| ||||||||||||||| |||||||  |||  || ||||||||||||| |||||| |  |||||| |||| |||||||||    
T  4545 ttaagaccattcttaattccgaagggacat--ttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggaca 4627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 150729 - 150765
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaacttt 57  Q
    ||||||||||||||||||||  |||||||||||||||    
T  150729 gaccactcaaatatggtgttaccaccattctaacttt 150765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 18 - 312
Target Start/End: Original strand, 25677 - 25987
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccaccattt 117  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25677 tgagaccactcaaatatggtgttaccaccattctaattttaatttctccaaagtatcaatatgacactacgaccactcaaatatggtgataccaccattt 25776  T
Q  118 c--------------tcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaaatag 200  Q
    |              |||||||   ||||||| |||| | | ||||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  25777 ccactttttaatttctcctcaattaaaatatt-gaaagaatatttata--taccgttaagatcattcttaattccgacgagacattattattccaaaaag 25873  T
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    ||||||||||||||| || ||||||||||| |||||||| |   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25874 ggactatgatcttaatagcactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaacc 25973  T
Q  298 gaaaaagggactatg 312  Q
    | |||||||||||||    
T  25974 g-aaaagggactatg 25987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 29393 - 29695
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaactttaatttctc----caaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    ||||| |||||||| |||||||||||| ||||||||||||| ||||||    
T  29393 tgagaccactcaaatatggtgttaccaccattctaactttaatttctctaaccaaaatatcaatattgcactacgaccactcaaatatggtgacaccacc 29492  T
Q  114 attt--------------ctcctcaa---aaatatttgaaatactttttatatataccgttaagatcattcttaattccgacgggacattgttattccaa 196  Q
    ||||              ||| ||||   ||||||| |||| | | ||||||||  | ||||||||||||||||||| ||||| |||||| |||||||||    
T  29493 atttccactttttaatttctcttcaattaaaatatt-gaaagaatatttatata--ctgttaagatcattcttaatttcgacgagacattattattccaa 29589  T
Q  197 atagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    | ||||||||||||||||| || |||||| |||| |||||||| |   ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  29590 aaagggactatgatcttaatag-actcttcattccgaagggacttatattatcaaagggactatgtttttaagaccattcttaattctgaagggacatta 29688  T
Q  294 aaccgaa 300  Q
    |||||||    
T  29689 aaccgaa 29695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 148110 - 147972
Alignment:
Q  157 taagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaaggga 253  Q
    |||||||||||||||||  || |||||||| || ||| ||| |||||||||||||||||||||| ||||||||||||||||| ||   |||||||| |||    
T  148110 taagatcattcttaattttgatgggacattatttttcaaaa-agggactatgatcttaaaagtattctttattctgaagggagatacattatcgaatgga 148012  T
Q  254 ctatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||||| | ||||||||||||| |||||||||    
T  148011 ctatgtttttaagatctttcttaattccgatgggacatta 147972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 148270 - 148166
Alignment:
Q  15 tgttgagaccactcaaatatggtgttgtcaccattctaac-tttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgataccacc 113  Q
    |||||||||||||||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||| ||||| |||| || |||||||||| ||||||    
T  148270 tgttgagaccactcaaatatagtgttaccaccattctaacttttaagttctccaaactatcaatatggtactacaaccactctaatatggtgaaaccacc 148171  T
Q  114 atttc 118  Q
     ||||    
T  148170 ttttc 148166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 5664 - 5757
Alignment:
Q  147 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat 241  Q
    ||||||| ||||||||||||||||||||| | | |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  5664 tatatactgttaagatcattcttaattccaatgagacatttttattccaaa-atggactatgatcttaaaagtactctttattctgaagggacat 5757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 5513 - 5615
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatacca 111  Q
    ||||| ||| |||||||||||||||||||  ||| ||||| ||||||| |||||||||  |||  ||||| |||| ||||| ||||||||||||||| ||    
T  5513 tggtgctgataccactcaaatatggtgttaccactattcttactttaagttctccaaattatctttatggtactatgaccactcaaatatggtgataaca 5612  T
Q  112 cca 114  Q
    |||    
T  5613 cca 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 171444 - 171342
Alignment:
Q  202 gactatgatcttaaaagtactctttattctgaagggaca--tttatcgaagggactatgtttttaagaccattcttaattccgaagggaca--ttaaacc 297  Q
    |||||||||||||||| |||||||  |||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||    
T  171444 gactatgatcttaaaaatactcttatttctgaagggacaaatttatcgaagggactacgttcttaagaccattcttaattccgaagggacaatttaaacc 171345  T
Q  298 gaa 300  Q
    |||    
T  171344 gaa 171342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 4395 - 4496
Alignment:
Q  203 actatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccga 299  Q
    ||||||||||||||| || ||||||||| |||||||| |   ||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  4395 actatgatcttaaaaatattctttattccgaagggacgtatattatcgaagggactatgcttttaagac-attcttaattccgaagggacattataccga 4493  T
Q  300 aaa 302  Q
    |||    
T  4494 aaa 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 4207 - 4259
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaa 69  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||||||    
T  4207 tgagaccactcaaatatggtgttaccaccattctaatttttaatttctccaaa 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 9536 - 9467
Alignment:
Q  242 ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  9536 ttatcgaagggactatgctcttaagaccattcttaattccgaatggacattaaaccg-aaaagggactatg 9467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 9754 - 9650
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa--ctttaatttctccaaaacatcaatatggcactacgaccattcaaatatggtgatac 109  Q
    |||||||||||||||||||||||||||||  |||||||||||   ||||| |||||| ||| ||||||| |||| | | |||| |||||||||||| |||    
T  9754 tggtgttgagaccactcaaatatggtgttaccaccattctaattttttaacttctcc-aaatatcaata-ggcatttcaaccactcaaatatggtgctac 9657  T
Q  110 caccatt 116  Q
     ||||||    
T  9656 gaccatt 9650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 42184 - 42259
Alignment:
Q  18 tgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgacca 92  Q
    ||||||||||||| ||||||||| |||||||||||| |||||| |||||||||| |||||||| | ||||||||||    
T  42184 tgagaccactcaagtatggtgttctcaccattctaacctttaacttctccaaaatatcaatattgtactacgacca 42259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 13601 - 13670
Alignment:
Q  155 gttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactct 224  Q
    |||||||||||||||||||| ||||||||||| || |  |||| ||||||||||||||||||| ||||||    
T  13601 gttaagatcattcttaattctgacgggacattattttatcaaaaagggactatgatcttaaaaatactct 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13485 - 13521
Alignment:
Q  21 gaccactcaaatatggtgttgtcaccattctaacttt 57  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  13485 gaccacttaaatatggtgttatcaccattctaacttt 13521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 3001 - 3077
Alignment:
Q  17 ttgagaccactcaaatatggtgttgtcaccattctaa-ctttaatttctccaaaacatcaatatggcactacgacca 92  Q
    |||||||||||||| || |||||| |||||||||||| |||||| |||||||||| |||||||| | ||||||||||    
T  3001 ttgagaccactcaagtacggtgttctcaccattctaacctttaacttctccaaaatatcaatattgtactacgacca 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 46006 - 46062
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  46006 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 46062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 152781 - 152725
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  152781 tggtgttgagaccactcaaatatggtgttaccaccattctaattttaacttctccaa 152725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 146061 - 145992
Alignment:
Q  243 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatg 312  Q
    |||||||||||||||| | |||| |||||||||| ||  ||| |||||||| ||||||||||||||||||    
T  146061 tatcgaagggactatgctcttaaaaccattcttatttttgaatggacattataccgaaaaagggactatg 145992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 5943 - 5899
Alignment:
Q  249 agggactatgtttttaagaccattcttaattccgaagggacatta 293  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  5943 agggactatgttcttaagaccattcttaatttcgaagggacatta 5899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 83448 - 83560
Alignment:
Q  201 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 297  Q
    ||||||||||||||||| || | |||||||| || ||| ||   |||| |||||||||||| | |||||||| ||||| |||| ||||||||| || |||    
T  83448 ggactatgatcttaaaa-tattatttattctaaaaggatataaattattgaagggactatgctcttaagaccgttcttgattctgaagggacaatatacc 83546  T
Q  298 gaaaaagggactat 311  Q
    || |||||||||||    
T  83547 gacaaagggactat 83560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 83286 - 83327
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaa 53  Q
    |||||||||||||||||||||||||||||   ||||||||||    
T  83286 tggtgttgagaccactcaaatatggtgttactaccattctaa 83327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 47730 - 47692
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattc 50  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  47730 tggtgttgagaccactcaaatatggtgttaccaccattc 47692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 52773 - 52717
Alignment:
Q  12 tggtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    ||||||||||||| |||||||||||| ||  ||||||||||| ||||  ||||||||    
T  52773 tggtgttgagaccgctcaaatatggttttaccaccattctaattttatcttctccaa 52717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 35569 - 35515
Alignment:
Q  14 gtgttgagaccactcaaatatggtgttgtcaccattctaactttaatttctccaa 68  Q
    ||||||||||  |||||||||||||||  ||||||||||| ||||| ||||||||    
T  35569 gtgttgagactgctcaaatatggtgttaccaccattctaattttaacttctccaa 35515  T

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