View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9086_high_6 (Length: 237)
Name: NF9086_high_6
Description: NF9086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9086_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 46894299 - 46894080
Alignment:
| Q |
1 |
gggcctaagcccggcccaatggttacaatccctcggttcctcttctcttgtgctccttcctttttggcccaaaagggcttacccaataacgttcaaggcg |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46894299 |
gggcctaagcccggcccaatggttacaatccctcagttcctcttctcttgtgctccttcctttttggcccaaaagggcttacccaataacgttcaaggcg |
46894200 |
T |
|
| Q |
101 |
ttgttgggttagcccattcacccatttcactgcaaaatcaactttcatcccattttggactcaaatgccaattcaccatgtgtctctctcgacacccaaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
46894199 |
ttgttgggttagcccattcacccatttcactgcaaaatcaactttcatcccattttggactcaaacgccaattcaccatgtgtctctctcgacacccaaa |
46894100 |
T |
|
| Q |
201 |
ttcaaacggagctatactct |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
46894099 |
ttcaaacggagctatactct |
46894080 |
T |
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