View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9086_low_19 (Length: 236)
Name: NF9086_low_19
Description: NF9086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9086_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 46892233 - 46892449
Alignment:
| Q |
20 |
ccatctgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctctt |
119 |
Q |
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| T |
46892233 |
ccatatgtttccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctctt |
46892332 |
T |
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| Q |
120 |
cataatcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctcaa |
219 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892333 |
catcatcctatcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctcaa |
46892432 |
T |
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| Q |
220 |
tcactcttccctattgc |
236 |
Q |
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||||||||||||||||| |
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| T |
46892433 |
tcactcttccctattgc |
46892449 |
T |
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