View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9087_low_15 (Length: 242)
Name: NF9087_low_15
Description: NF9087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9087_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 39138934 - 39139157
Alignment:
| Q |
14 |
tcaagatcatagagtaggtagtggtggctgtgacatgatcagcagaaaaagtggcggcataggggatgatgatgatgataaaacagatgtgaagtgaagt |
113 |
Q |
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| T |
39138934 |
tcaagatcatagagtaggtagtggtggctgtgacgtgatcagcagaaaaagtggcggcataggtgatgatgatgatgataaaacagatgtgaagtgaagt |
39139033 |
T |
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| Q |
114 |
aaagaagctgggtgtgtaatagtgtacatgaatgtgcattaatttacctagcacatcaagaattaaaggtggttgttgagcaacgagccacacttgtgtt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39139034 |
aaagaagctgggtgtgtaatagtgtacatgaatgtgcattaatttacctagcacatcaagaattaaaggtggttgttgagcaacgagccacacttgtgtt |
39139133 |
T |
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| Q |
214 |
ctcttttcatagtgctctctgctc |
237 |
Q |
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|||||||||||||||||||||||| |
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| T |
39139134 |
ctcttttcatagtgctctctgctc |
39139157 |
T |
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