View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9088_low_13 (Length: 263)
Name: NF9088_low_13
Description: NF9088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9088_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 37880758 - 37881015
Alignment:
| Q |
1 |
catatggtattattaagattgaatggattccttaccagatcatcttcctcaggcctgactcctttagcgaaaccgtcacgcagtcttcggttctcttctt |
100 |
Q |
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| T |
37880758 |
catatggtatgattaagattgaatggattccttaccagatcatcttcctcaggcctgactcctttagcgaaaccgtcacgcagtcttcggttctcttctt |
37880857 |
T |
|
| Q |
101 |
caagcagaccacatctttcttgcataaaacataaatctgatttaagagacttcaattctcttgcaagtgtagctgctttgcttgccatggaaactgcaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37880858 |
caagcagaccacatctttcttgcataaaacataaatctgatttaagagacttcaattctcttgcaagtgtagctgctttgcttgccatggaaactgcaat |
37880957 |
T |
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| Q |
201 |
ctgcaaaaatgaaaacaagttacaattggccacaaacttcagtaccagtataatctac |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37880958 |
ctgcaaaaatgaaaacaagttacaattggccacaaacttcagtaccaatataatctac |
37881015 |
T |
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