View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9090_high_21 (Length: 361)
Name: NF9090_high_21
Description: NF9090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9090_high_21 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 34359941 - 34360271
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34359941 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttctcctagtt |
34360039 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360040 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
34360139 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360140 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttctacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
34360239 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
34360240 |
gcgtgataatattttgttactctggtacctaa |
34360271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 41718395 - 41718725
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
41718395 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
41718493 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718494 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
41718593 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718594 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
41718693 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
41718694 |
gcgtgataatattttgttactctggtacctaa |
41718725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 41723121 - 41723451
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
41723121 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
41723219 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723220 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
41723319 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723320 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
41723419 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
41723420 |
gcgtgataatattttgttactctggtacctaa |
41723451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 29585633 - 29585302
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585633 |
aaatcagtaacaacacaacaacaagtaaagcttgtctagagtagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
29585534 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585533 |
tgtattagttagtattctcctatttataagagagagtggtaattgtactctctttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
29585434 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585433 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
29585334 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |
|
|
| T |
29585333 |
gcatgataatattttgttactctgatacctaa |
29585302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 34352233 - 34352546
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34352233 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttctcctagtt |
34352331 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352332 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
34352431 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352432 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
34352531 |
T |
|
| Q |
301 |
gcgtgataatatttt |
315 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
34352532 |
gcgtgataatatttt |
34352546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 42265888 - 42266218
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |
|
|
| T |
42265888 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtt |
42265986 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265987 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
42266086 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266087 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
42266186 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |
|
|
| T |
42266187 |
gcgtgataatattttgttactctggtatctaa |
42266218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 42270607 - 42270937
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |
|
|
| T |
42270607 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtt |
42270705 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270706 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
42270805 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270806 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
42270905 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |
|
|
| T |
42270906 |
gcgtgataatattttgttactctggtatctaa |
42270937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 48702153 - 48701823
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
48702153 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
48702055 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702054 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
48701955 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701954 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
48701855 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
48701854 |
gcgtgataatattttgttactctggtacctaa |
48701823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 24520357 - 24520031
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
24520357 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
24520259 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520258 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
24520159 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
24520158 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagtt |
24520059 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtac |
328 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
24520058 |
gcgtgataatattttgttactctggtac |
24520031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 48697464 - 48697133
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
48697464 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
48697366 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697365 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
48697266 |
T |
|
| Q |
201 |
ctctactcttgccccgtggtt-ttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagc |
299 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48697265 |
ctctactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagc |
48697166 |
T |
|
| Q |
300 |
tgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
48697165 |
tgcgtgataatattttgttactctggtacctaa |
48697133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 37 - 332
Target Start/End: Complemental strand, 30945775 - 30945479
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagag |
134 |
Q |
| |
|
|||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
30945775 |
tagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag |
30945676 |
T |
|
| Q |
135 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatt |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
30945675 |
agtggtaattgtactctccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctctactcttgccccgtgatttttt-cccttatt |
30945577 |
T |
|
| Q |
235 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30945576 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagctgcgtgataatattttgttactctgatacctaa |
30945479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 37 - 332
Target Start/End: Complemental strand, 30950481 - 30950185
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagag |
134 |
Q |
| |
|
|||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
30950481 |
tagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag |
30950382 |
T |
|
| Q |
135 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatt |
234 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30950381 |
agtggtaattgtactttccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt-cccttatt |
30950283 |
T |
|
| Q |
235 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950282 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttatcttattttagctgcgtgataatattttgttactctggtacctaa |
30950185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 10427315 - 10427595
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
10427315 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
10427404 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||| || |||||| ||||||||||||||||||||||| |
|
|
| T |
10427405 |
tttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttatctactttttccccgtagttttttccccttatttgttgag |
10427504 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
10427505 |
gggtttccgcgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattctgttactctggtacctaa |
10427595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 126 - 321
Target Start/End: Original strand, 48782850 - 48783031
Alignment:
| Q |
126 |
ataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt |
225 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
48782850 |
ataagagagagtggtaattgtactc--catgtatttagagagaggtcatctaatttcttccacttagtgaaagttct---------ccccatg--ttttt |
48782936 |
T |
|
| Q |
226 |
ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttact |
321 |
Q |
| |
|
||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| |||| |
|
|
| T |
48782937 |
ccctttatttgttgagaaatttccacgt-aaatattgtgtgttcagttcctgttttctcgtttcttattttaatcgcgtgataatattttgatact |
48783031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 210
Target Start/End: Original strand, 1979253 - 1979375
Alignment:
| Q |
82 |
tgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaattt |
181 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |||||||| |||||||||||||||||||| | ||| ||||||| |||| ||||||||| |||||||| |
|
|
| T |
1979253 |
tgtgaggtttctcctggttagtgctagt----attctcctgtttataagagagagtggtaaatataccctccttgcattt--agagaggtcgtgtaattt |
1979346 |
T |
|
| Q |
182 |
cttccacttagtgaaagttctctactctt |
210 |
Q |
| |
|
||||| |||| |||||||| ||||||||| |
|
|
| T |
1979347 |
cttcctcttactgaaagttatctactctt |
1979375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 17248015 - 17248112
Alignment:
| Q |
183 |
ttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctctttt |
281 |
Q |
| |
|
||||||||| |||||||||| ||||||| || |||||||||||||||||||| || |||| |||||| || ||||||||||| || |||| ||||||| |
|
|
| T |
17248015 |
ttccacttaatgaaagttctatactcttatccggtggttttttccccttatttattaagggatttccatgt-aaatattgtgtatttagtttctctttt |
17248112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 36615438 - 36615361
Alignment:
| Q |
255 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||| ||| ||||| ||| |||||||||| | |||||||||| ||| | ||||||||||| ||||||| |||||||| |
|
|
| T |
36615438 |
aaataatgtatgttcggtttctcttttctcatatcttattttaactgtgcgataatattttattactctagtacctaa |
36615361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 30165900 - 30165968
Alignment:
| Q |
255 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactct |
323 |
Q |
| |
|
||||||| |||||||| ||| | ||||||| | ||||||||||| || |||||| |||||||||||||| |
|
|
| T |
30165900 |
aaatattatgtgttcaattcattttttctcatatcttattttagttgtgtgatattattttgttactct |
30165968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 1979567 - 1979604
Alignment:
| Q |
230 |
ttatttgttgaggggtttccacgtaaaatattgtgtgtt |
268 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1979567 |
ttatttgttgaggggtttccacgt-aaatattgtgtgtt |
1979604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 5823607 - 5823277
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
5823607 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
5823509 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823508 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
5823409 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823408 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
5823309 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5823308 |
gcgtgataatattttgttactctggtacctaa |
5823277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 5818845 - 5818515
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
5818845 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
5818747 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818746 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
5818647 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5818646 |
ctctactcttgccccgtggttttttccccttattagttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagtt |
5818547 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5818546 |
gcgtgataatattttgttactctggtacctaa |
5818515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 37 - 332
Target Start/End: Original strand, 54545902 - 54546198
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagag |
134 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
54545902 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag |
54546001 |
T |
|
| Q |
135 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatt |
234 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
54546002 |
agtggtaattgtactctccttgtagttagagagaggtcctgtaatttcatccacttagtgaaagttctctactctagccccgtggttttttccccttatt |
54546101 |
T |
|
| Q |
235 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54546102 |
tgttgaggggtttccacgt-aaatattgtatgttcagttcctcttttctcatctcttattttagctgcgtgataatattttgttactctggtacctaa |
54546198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 2817583 - 2817265
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| |||| |
|
|
| T |
2817583 |
aaatcagtaacaacacaagaacaagtaaaacttgtttagggtaatgagagaaaaaatatagagaggaaaaatagtttctcct--------------agtt |
2817498 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagag--tggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaag |
198 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| || |
|
|
| T |
2817497 |
tgtattagttagtattctcctatttataagagagagagtggtgattgtactctccttgtatttagagagagttcttgtaatttcttccacttagtgagag |
2817398 |
T |
|
| Q |
199 |
ttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttag |
298 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2817397 |
ttctttactcttgccctgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttag |
2817299 |
T |
|
| Q |
299 |
ctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
2817298 |
ctgcgtgataatattttgttactctggtacctaa |
2817265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 181 - 332
Target Start/End: Complemental strand, 24659287 - 24659138
Alignment:
| Q |
181 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
280 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24659287 |
tcttccacttagtgaaagttct--actcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatgttgtgtgttcagttcctcttt |
24659190 |
T |
|
| Q |
281 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
24659189 |
tctcatctcttattttagctgtgtgataatattttattactctggtacctaa |
24659138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 4579254 - 4579360
Alignment:
| Q |
220 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4579254 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgtta |
4579353 |
T |
|
| Q |
320 |
ctctggt |
326 |
Q |
| |
|
||||||| |
|
|
| T |
4579354 |
ctctggt |
4579360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 148 - 320
Target Start/End: Complemental strand, 31204950 - 31204781
Alignment:
| Q |
148 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgcc-ccgtggttttttccccttatttgttgaggggtt |
246 |
Q |
| |
|
|||||||| ||||||||||| || |||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
31204950 |
ctctccttatatttagagag--gttttgtaatttttcccacttagtgaaagttctctactattgcctccgtgattttttcctcttatttgttgaggggtt |
31204853 |
T |
|
| Q |
247 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttac |
320 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| || |||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
31204852 |
tccacgt-aaatattgtgagttcagttcctctttt-tcatctcttcttttaactgcgtgctaatattttgttac |
31204781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 24671301 - 24671173
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
24671301 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctattt-caagagagag-ggtaa |
24671212 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaattt |
181 |
Q |
| |
|
|| ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
24671211 |
tttgtctctccttgtatttagagagaagtcttgtaattt |
24671173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 296
Target Start/End: Original strand, 35977103 - 35977258
Alignment:
| Q |
139 |
gtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttc-tctactcttgccccgtggttttttccccttatttgt |
237 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||| || | |||||||||| ||| |||||||| ||| ||| |
|
|
| T |
35977103 |
gtaattgttctctccttgtatttagagagaagtcttgtaattttttccacttagtgaaaactcttttactcttgccaagtgagtttttccc--tatatgt |
35977200 |
T |
|
| Q |
238 |
tgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatttt |
296 |
Q |
| |
|
||| || ||| |||| ||||||||| |||||| || |||||||||| |||||||||| |
|
|
| T |
35977201 |
tgatggttttttacgt-aaatattgtttgttcaatttctcttttctcacctcttatttt |
35977258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 4579126 - 4579241
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||| |||| |||||||||||||| | ||||||| ||||| |
|
|
| T |
4579126 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcatag--------agttagtattctcctattt-cacgagagag-ggtaa |
4579215 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagaga |
168 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
4579216 |
tttgtctctccttgtatttagagaga |
4579241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 9439704 - 9439374
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
9439704 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
9439606 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439605 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
9439506 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439505 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
9439406 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
9439405 |
gcgtgataatattttgttactctggtacctaa |
9439374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 9444424 - 9444094
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
9444424 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
9444326 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444325 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
9444226 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444225 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
9444126 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
9444125 |
gcgtgataatattttgttactctggtacctaa |
9444094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 4799315 - 4799371
Alignment:
| Q |
261 |
tgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgt |
317 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
4799315 |
tgtgtgttcaatttctcttttctcatctcttattttagcagtgtgataatattttgt |
4799371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 1234686 - 1235016
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
1234686 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
1234784 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234785 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
1234884 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234885 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
1234984 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
1234985 |
gcgtgataatattttgttactctggtacctaa |
1235016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 26976463 - 26976133
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
26976463 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
26976365 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976364 |
tgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
26976265 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976264 |
ctctactcttgccccttggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
26976165 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26976164 |
gcgtgataatattttgttactctggtacctaa |
26976133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 27874322 - 27873992
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |
|
|
| T |
27874322 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcctagtt |
27874224 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874223 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
27874124 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
27874123 |
ctctactcttgccccgtggttttttccctttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagat |
27874024 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
27874023 |
gcgtgataatattttgttactctggtacctaa |
27873992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 37 - 332
Target Start/End: Complemental strand, 27879008 - 27878711
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagag |
134 |
Q |
| |
|
|||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
27879008 |
tagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag |
27878909 |
T |
|
| Q |
135 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatt |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878908 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatt |
27878809 |
T |
|
| Q |
235 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878808 |
tgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
27878711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 18967912 - 18968192
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| ||||||||| |||| ||| ||||||||| |||||||||||||||||| ||| |||||||||||||| | ||||||| | ||| |
|
|
| T |
18967912 |
agtgagaggaaaaatataaagaggaaatatagtttctcttgtgaggtttctcctagt--------gttagtattctcctatttc-atgagagag-gctaa |
18968001 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968002 |
tttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttttctactcttgccccgtggttttttccccttatttgttgag |
18968101 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968102 |
gggtttccacgtaaaatattatgtattcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
18968192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 59 - 332
Target Start/End: Original strand, 30986552 - 30986827
Alignment:
| Q |
59 |
tagagagaaa-aattagtttctcctg-tgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttg |
156 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||||||||| | |||| ||| ||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30986552 |
tagagagaaagaaatagtttctcctcatgaggtttctcctaggtagtgtcagt----attcttctatttacaagagagagtggtaattgtactctccttg |
30986647 |
T |
|
| Q |
157 |
tatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtgg--ttttttccccttatttgttgagggg---tttccac |
251 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| |
|
|
| T |
30986648 |
catttagagagaggtcctgcaatttcttccacttagtgaaagttctctactcttgccccgtggttttttttttccttatttgttgaggggtactttccac |
30986747 |
T |
|
| Q |
252 |
gtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
30986748 |
gt-aaatattgtgcgttcagttcctcttttctcgtctcttattttagctacgtgataatattttgttactctgatacctaa |
30986827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 46 - 288
Target Start/End: Original strand, 30966683 - 30966923
Alignment:
| Q |
46 |
gagagaaaaaatatagagagaaa-aattagtttctcct-gtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaat |
143 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| || |||||||||||||||| | | | ||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
30966683 |
gagagaaaaaatatagagagaaagaaatagtttctacttgtgaggtttctcctaggtagcctcagt----attcttctatttacaagagagagtggtaat |
30966778 |
T |
|
| Q |
144 |
tgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgagg |
242 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| | |
|
|
| T |
30966779 |
tgtactctccttgcatttagagagaggttctgcaatttcttccacttagtgaaagttctctactcttgccccgtgattttatttcccttatttgttgatg |
30966878 |
T |
|
| Q |
243 |
ggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtct |
288 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30966879 |
ggtttccacgt-aaatattgtgtgttcagttcctcttttctcgtct |
30966923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 143 - 329
Target Start/End: Original strand, 21966677 - 21966860
Alignment:
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgagg |
242 |
Q |
| |
|
|||||||||| ||| | ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| | | |||||||| |||||| |||||| |
|
|
| T |
21966677 |
ttgtactctctttgaaattagagagaggtcttataatttcttccatttagtgaaagttctctactcttgccccat-gatttttccctttatttattgagg |
21966775 |
T |
|
| Q |
243 |
ggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
329 |
Q |
| |
|
||||||||| | ||||||| | |||| ||||||||||||||| | | ||| ||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
21966776 |
ggtttccacat-aaatattttatgtttagttcctcttttctcatatgtta-tttagctgcgtgataatgtttcgttactttggtacc |
21966860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 315
Target Start/End: Complemental strand, 23012667 - 23012520
Alignment:
| Q |
166 |
agaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgt |
265 |
Q |
| |
|
||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||| || | ||||||||||||| || ||||| |
|
|
| T |
23012667 |
agaggtcttgaaatttctctcacttagtgaaagttctctactcttgccca-tggtttttccccttaatttgt-gacgagtttccacgtaaa-taatgtgt |
23012571 |
T |
|
| Q |
266 |
gttcagttcctctttt-ctcgtctcttattttagctgcgtgataatatttt |
315 |
Q |
| |
|
||||| ||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
23012570 |
gttcaattcttctttttctcgtctcttattttagttgcgtgataatatttt |
23012520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 30967674 - 30967723
Alignment:
| Q |
283 |
tcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30967674 |
tcgtctcttattttagctgcttgataatattttgttactctggtacctaa |
30967723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 5198987 - 5198664
Alignment:
| Q |
1 |
aaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
5198987 |
aaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtt |
5198889 |
T |
|
| Q |
101 |
tgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagtt |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198888 |
tgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagtt |
5198789 |
T |
|
| Q |
201 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198788 |
ctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagct |
5198689 |
T |
|
| Q |
301 |
gcgtgataatattttgttactctgg |
325 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
5198688 |
gcgtgataatattttgttactctgg |
5198664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 45 - 323
Target Start/End: Original strand, 15602905 - 15603183
Alignment:
| Q |
45 |
tgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaatt |
144 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | || ||||||||||| |||| ||||||||| ||||||||||||||| |||| ||| |||||||| |
|
|
| T |
15602905 |
tgagaggaaaaatatagaaagaaaaattagatttttctatgaggtttctcttagtaagtgttagttagtattctcctatttacaagatagaatggtaatt |
15603004 |
T |
|
| Q |
145 |
gtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgagggg |
244 |
Q |
| |
|
|||| |||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603005 |
gtacactccatgcatttagagagaggtcttgtaatttcttctacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgagggg |
15603104 |
T |
|
| Q |
245 |
tttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactct |
323 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| |
|
|
| T |
15603105 |
tttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatttcaattgcgtgataatattttcttactct |
15603183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 825632 - 825794
Alignment:
| Q |
171 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
269 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
825632 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgagtggtttccacgtaaaatattgtgtgttc |
825731 |
T |
|
| Q |
270 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
825732 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
825794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 830288 - 830450
Alignment:
| Q |
171 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
269 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830288 |
tcctgtaatttcttccacttagtgaaagttctccactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
830387 |
T |
|
| Q |
270 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
830388 |
agttcctcttttctcgtctcttattttaactgcgtgataatattttgttactctggtacctaa |
830450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 67 - 327
Target Start/End: Original strand, 28715816 - 28716070
Alignment:
| Q |
67 |
aaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagaga |
166 |
Q |
| |
|
|||| ||||||||| ||| ||||||||||||| | |||||||| ||||||||||||||| || | ||||||||||||||||||||| ||||||||| |
|
|
| T |
28715816 |
aaaaatagtttctcttgtaaggtttctcctaggtagtgttagt----attctcctatttataggaaacggtggtaattgtactctccttgcatttagaga |
28715911 |
T |
|
| Q |
167 |
gaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtg |
266 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
28715912 |
gatgtcctgtaatttcttccactttgtgaaagttctctattcttctcttgtgg-tttttccccttatttaatgaggggtttccacgt-aaatattgtgtg |
28716009 |
T |
|
| Q |
267 |
ttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggta |
327 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
28716010 |
ttcaattcctcttttgtcgtctcttattttaaatgtgtgataatattttgttactctggta |
28716070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 43 - 338
Target Start/End: Complemental strand, 30397191 - 30396907
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| || ||||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||||||||||| || | |||| ||||| |
|
|
| T |
30397191 |
agtgagaggaacaatatagagaggaaatatagtttctcctgtgagatttctcctagt--------gttaatattctcctatttc-aacatagag-ggtaa |
30397102 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaa-gttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| |||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||| |||||| ||||||||||||||| |
|
|
| T |
30397101 |
tttgtctctccttgtatatagaaagaggtcttgtaatttcttccacttagtgaaaagttctctactctcgccctgtgatttttttcccttatttgttgag |
30397002 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaatagtat |
338 |
Q |
| |
|
||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
30397001 |
gggtttcaacg-aaaatat-gtgtgttcagttcgtcttttctcgtctcttattttagctgcgtgataatattttgctactctggcacccaatagtat |
30396907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 830205 - 830291
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgtta--gtttgtattctcct |
121 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
830205 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct |
830291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 825549 - 825635
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgtta--gtttgtattctcct |
121 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
825549 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgcgaggtttctcctaggtagtgttagtgtttgtattctcct |
825635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 265
Target Start/End: Complemental strand, 13844014 - 13843865
Alignment:
| Q |
114 |
attctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgcc |
213 |
Q |
| |
|
|||||||||||| ||| | |||||||||||| || ||| |||||||||| | || ||||||||||||||||||||||| ||||| |||| |||| || | |
|
|
| T |
13844014 |
attctcctatttttaaaatagagtggtaattttattcttcttgtatttataaaggggtcctgtaatttcttccacttaatgaaaattctatacttttaac |
13843915 |
T |
|
| Q |
214 |
ccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgt |
265 |
Q |
| |
|
| | |||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13843914 |
ctat-aatttttctccttatttgttgaggggtttccacgt-aaatattgtgt |
13843865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 31593068 - 31592923
Alignment:
| Q |
174 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
273 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| | |||||||||| | |||||| ||||| | |||||||||||| |||||| |||| ||| |
|
|
| T |
31593068 |
tgtaatttctttcggttagtgaaagttctctactcttatct-gtggttttttttc-ttatttattgagagatttccacgtaaattattgtatgttatgtt |
31592971 |
T |
|
| Q |
274 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttact |
321 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||||||||| ||||||| |
|
|
| T |
31592970 |
cctcttttctcgtctcttattctatctgtgtgataatattatgttact |
31592923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 8004167 - 8004292
Alignment:
| Q |
112 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
211 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||| | |||||||||||| | |||||||||| |||| || | |
|
|
| T |
8004167 |
gtattctcctatttataagagagagtg-taattgtactcttcttacatttaaagagaggttttataatttcttccattcagtgaaagttttctagtcata |
8004265 |
T |
|
| Q |
212 |
ccccgtggttttttccccttatttgttg |
239 |
Q |
| |
|
|||||| | ||||||| ||||||||||| |
|
|
| T |
8004266 |
ccccgttg-tttttcctcttatttgttg |
8004292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 112 - 329
Target Start/End: Complemental strand, 13840456 - 13840245
Alignment:
| Q |
112 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
211 |
Q |
| |
|
||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||||| |||||||| || |||| || ||| || |||||||||| |
|
|
| T |
13840456 |
gtattcttttatttttaagagagaattgtaattgtactctccttatatttagagagaggttttgtaattt-ttttacttggtaaaaattttctactcttg |
13840358 |
T |
|
| Q |
212 |
ccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataata |
311 |
Q |
| |
|
| || || |||| |||||| |||||||||| || || || |||||| ||||||| ||||||| |||||| ||| ||||| || | |||||||||| |
|
|
| T |
13840357 |
ctccatg--ttttcccccttgtttgttgaggaattctcatgt-aaatat--tgtgttcggttcctcctttctcatcttttattataattacgtgataata |
13840263 |
T |
|
| Q |
312 |
ttttgttactctggtacc |
329 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
13840262 |
ttttgttattctggtacc |
13840245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 12175881 - 12175768
Alignment:
| Q |
199 |
ttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttag |
298 |
Q |
| |
|
||||||||||||| || | ||||||||| |||||| ||||| |||||||| ||||||||||||||||| || || |||| || ||| ||||||||| |
|
|
| T |
12175881 |
ttctctactcttgtccaattgttttttcca-ttatttattgagatgtttccaca-aaaatattgtgtgttcaatttcttttttatcatcttttattttag |
12175784 |
T |
|
| Q |
299 |
ctgcgtgataatattt |
314 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12175783 |
ttgcgtgataatattt |
12175768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 9358207 - 9358158
Alignment:
| Q |
270 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
319 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||| ||||||||| |||| |
|
|
| T |
9358207 |
agttcttcttttctcgtctgttgttttagctgcgtaataatatttggtta |
9358158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 42117769 - 42117876
Alignment:
| Q |
164 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
263 |
Q |
| |
|
||||||||| | |||||||| | ||| |||||||| |||||| ||| | ||||||||| |||||||||| ||||| |||||| |||| ||||||||| |
|
|
| T |
42117769 |
agagaggtcttataatttctctcgtttaatgaaagttatctacttttgtctcgtggtttt-tccccttattaattgagaggtttctacgt-aaatattgt |
42117866 |
T |
|
| Q |
264 |
gtgttcagtt |
273 |
Q |
| |
|
||||||||| |
|
|
| T |
42117867 |
atgttcagtt |
42117876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 43 - 329
Target Start/End: Complemental strand, 16183913 - 16183636
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
16183913 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
16183824 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183823 |
tttgtctctccttgtatttagagagaggtcttgtaattgtcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
16183724 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183723 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
16183636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 37 - 329
Target Start/End: Original strand, 30235038 - 30235334
Alignment:
| Q |
37 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctg-tgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagaga |
133 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || | |||||||| |||||||||||||||||||||||| |
|
|
| T |
30235038 |
tagagtagtgagaggaaaaatatagagagaaaaattagtttctccttatgaggtttctcttacgtagtgttagtgtttgtattctcctatttataagaga |
30235137 |
T |
|
| Q |
134 |
gagtggtaattgtactctccttgtatttag-agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt-cccctt |
231 |
Q |
| |
|
|||||||||||||||||||||| || ||| |||||||||||||||||||||| | ||| |||||||| ||||||||| ||||||||||||| |||||| |
|
|
| T |
30235138 |
gagtggtaattgtactctccttataaataggagagaggtcctgtaatttcttctagttattgaaagttttctactcttatcccgtggtttttttcccctt |
30235237 |
T |
|
| Q |
232 |
atttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
329 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
30235238 |
attcgttgaggggtttccacgtaaa-tattgtgtgttcagttcctcttttctcattttttattttagctgtgtaataatattttgctactctggtacc |
30235334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 112 - 329
Target Start/End: Complemental strand, 8140183 - 8139969
Alignment:
| Q |
112 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
211 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||| |||||||||| |||| |||| |
|
|
| T |
8140183 |
gtattctcctatttc-aagagagag-ggtaatttgtctctccttgtattaagagagaggtcttataatttcttccactgagtgaaagttttctaatctta |
8140086 |
T |
|
| Q |
212 |
ccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataata |
311 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||| |||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
8140085 |
ccccatggttttctccccttatttgttgaggggtttccacat-aaatattgtgcgttcagtttctcttttctcatctcttattttagctgtgtgataata |
8139987 |
T |
|
| Q |
312 |
ttttgttactctggtacc |
329 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8139986 |
ttttgttactctggtacc |
8139969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 148 - 329
Target Start/End: Complemental strand, 8138645 - 8138465
Alignment:
| Q |
148 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggttt |
247 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||| |||||| |||||||| |
|
|
| T |
8138645 |
ctctccttgtatttagagggaggtcttgtaatttcttccatttagtgaaagttctctaatcttgcctcgtggttttctccccttgtttgttaaggggttt |
8138546 |
T |
|
| Q |
248 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
329 |
Q |
| |
|
|||| | || || |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |
|
|
| T |
8138545 |
ccacat-aattactgtgtgttaagtttttcttttctcgtctcttattttagctgcgtgataatactttgatactctgctacc |
8138465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 5102749 - 5102606
Alignment:
| Q |
176 |
taatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
275 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||||||||| || ||| |||||||||||||||||||| |||||| || || ||||||| ||| || ||| || |
|
|
| T |
5102749 |
taatttctcccacttagtaaaagttatctactcttgctccatgg-tttttccccttatttgttga-gggttttcatgt-aaatattatgtatttagtccc |
5102653 |
T |
|
| Q |
276 |
tc-ttttctcgtctcttattttagctgcgtgataatattttgttact |
321 |
Q |
| |
|
|| ||||||| ||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
5102652 |
tctttttctcatcttttattttagttgagtgataatattttgttact |
5102606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 329
Target Start/End: Complemental strand, 36528529 - 36528420
Alignment:
| Q |
219 |
gttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgtt |
318 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||||| || || |||||| |
|
|
| T |
36528529 |
gttttttttccttattcgtggaggggtttccacgtaaa-tattgtgtgttcaattcctctattctcatctcttattttagttgcgtaattttactttgtt |
36528431 |
T |
|
| Q |
319 |
actctggtacc |
329 |
Q |
| |
|
|||||| |||| |
|
|
| T |
36528430 |
actctgatacc |
36528420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 178; Significance: 6e-96; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 43 - 332
Target Start/End: Complemental strand, 27508 - 27228
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| |||||| |
|
|
| T |
27508 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattcacctatttc-aagagaga-tggtaa |
27419 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27418 |
tttgtctctccttgtatttagagagaagtattgtaattgtcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
27319 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27318 |
gggtttccacgtaaagtattgtgtgttcagtttctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
27228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 46191266 - 46191544
Alignment:
| Q |
43 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagtttgtgttagtttgtattctcctatttataagagagagtggtaa |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
46191266 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
46191355 |
T |
|
| Q |
143 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
241 |
Q |
| |
|
|| |||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
46191356 |
tttgtctctccttctatttagagagaagtcttgtaattgtcttccacttagtgaaagttctctactcttgtcccgtggttttttccccttatttgttgag |
46191455 |
T |
|
| Q |
242 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
46191456 |
gggtttccacgtaaaatat--tgtgttcagttcctcttttctcgtctcttattttagctgcatgataatattttgttactctggttcctaa |
46191544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 148 - 329
Target Start/End: Complemental strand, 30697300 - 30697120
Alignment:
| Q |
148 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggttt |
247 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
30697300 |
ctctccttgtatttagaaagaggtcttgtaatttcttccacttagtgaaagttctctactcttgccacgtggctttttccccttatttgttgaggggttt |
30697201 |
T |
|
| Q |
248 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
329 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30697200 |
ccacgt-aaatattttgtgttaagttcctcttttctcgtctcttatgttagctgcgtgataatattttgttactctagtacc |
30697120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 4130215 - 4130399
Alignment:
| Q |
148 |
ctctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtt |
246 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4130215 |
ctctccttgtatttagagagaagtcttgtaattatcttccacttagtgaaagttctctactcttgccccgtggttttttccctttatttgttgagggatt |
4130314 |
T |
|
| Q |
247 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
332 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
4130315 |
tccacgt-aaattttgtgtgttcagttcctcttttctcgtcacttattttagttgcgtgataatattttgttactcaagtacctaa |
4130399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 30674865 - 30674787
Alignment:
| Q |
112 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttag |
192 |
Q |
| |
|
||||||||||||| | |||||||| || ||||||| |||||||| | ||||| ||||||| | ||||||||||||||||| |
|
|
| T |
30674865 |
gtattctcctatt-acaagagagaatg-taattgttctctccttatttttagtgagaggttgtataatttcttccacttag |
30674787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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