View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9090_low_20 (Length: 536)

Name: NF9090_low_20
Description: NF9090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9090_low_20
NF9090_low_20
[»] chr7 (36 HSPs)
chr7 (19-525)||(23859034-23859533)
chr7 (308-525)||(7398412-7398632)
chr7 (308-507)||(27237348-27237545)
chr7 (336-525)||(9021754-9021940)
chr7 (308-507)||(12419419-12419617)
chr7 (304-521)||(2611181-2611399)
chr7 (308-475)||(23744808-23744974)
chr7 (308-483)||(38971257-38971430)
chr7 (308-525)||(23020409-23020623)
chr7 (308-507)||(21763513-21763709)
chr7 (317-483)||(8171472-8171637)
chr7 (317-483)||(29077224-29077389)
chr7 (338-505)||(36891560-36891728)
chr7 (316-440)||(9014111-9014233)
chr7 (317-525)||(9014702-9014903)
chr7 (302-483)||(8239691-8239871)
chr7 (317-481)||(18776698-18776862)
chr7 (304-506)||(6765604-6765802)
chr7 (304-483)||(23550990-23551169)
chr7 (412-525)||(20153164-20153276)
chr7 (304-403)||(5955515-5955614)
chr7 (308-498)||(12981315-12981502)
chr7 (312-483)||(20091207-20091379)
chr7 (412-483)||(48983871-48983942)
chr7 (304-483)||(38414795-38414974)
chr7 (304-368)||(26917651-26917715)
chr7 (308-509)||(18201115-18201313)
chr7 (429-525)||(17800265-17800362)
chr7 (317-463)||(26254017-26254163)
chr7 (308-481)||(10329333-10329506)
chr7 (304-483)||(24525601-24525783)
chr7 (355-483)||(36902898-36903022)
chr7 (412-482)||(28749715-28749784)
chr7 (374-483)||(47984959-47985068)
chr7 (412-483)||(10955488-10955559)
chr7 (413-483)||(12596315-12596385)
[»] chr4 (51 HSPs)
chr4 (308-525)||(36118383-36118598)
chr4 (309-507)||(39329317-39329514)
chr4 (308-521)||(27112000-27112212)
chr4 (313-506)||(52468272-52468463)
chr4 (324-525)||(24396901-24397102)
chr4 (308-498)||(10041923-10042113)
chr4 (308-496)||(37744827-37745021)
chr4 (308-403)||(5893099-5893195)
chr4 (308-507)||(36178658-36178852)
chr4 (310-507)||(40217217-40217411)
chr4 (317-483)||(43455464-43455629)
chr4 (313-499)||(36362798-36362984)
chr4 (298-525)||(15735062-15735282)
chr4 (304-465)||(39655173-39655334)
chr4 (317-483)||(47128996-47129161)
chr4 (308-507)||(51691844-51692039)
chr4 (304-404)||(30507039-30507142)
chr4 (312-478)||(32128598-32128764)
chr4 (317-483)||(2790674-2790839)
chr4 (318-483)||(54083176-54083340)
chr4 (312-483)||(16845030-16845200)
chr4 (312-483)||(34027588-34027758)
chr4 (412-509)||(45656158-45656255)
chr4 (412-496)||(4167918-4168002)
chr4 (317-483)||(54780786-54780953)
chr4 (317-483)||(38209523-38209689)
chr4 (358-483)||(10978909-10979036)
chr4 (317-483)||(35465116-35465280)
chr4 (412-488)||(35779352-35779428)
chr4 (356-492)||(2135294-2135428)
chr4 (318-483)||(37777156-37777321)
chr4 (324-481)||(1105543-1105699)
chr4 (412-483)||(13460216-13460287)
chr4 (358-483)||(34768548-34768672)
chr4 (359-481)||(48209251-48209374)
chr4 (308-377)||(4167846-4167915)
chr4 (308-377)||(11906826-11906895)
chr4 (317-452)||(17679440-17679574)
chr4 (358-452)||(51964748-51964844)
chr4 (308-404)||(24614040-24614137)
chr4 (412-483)||(40089525-40089596)
chr4 (317-442)||(16922260-16922386)
chr4 (358-483)||(19498513-19498635)
chr4 (412-480)||(37514671-37514739)
chr4 (412-483)||(5128869-5128940)
chr4 (317-483)||(32915394-32915560)
chr4 (312-474)||(16882323-16882484)
chr4 (312-402)||(38352193-38352283)
chr4 (304-402)||(40089614-40089712)
chr4 (317-452)||(10428131-10428264)
chr4 (307-367)||(45305044-45305104)
[»] chr8 (37 HSPs)
chr8 (309-525)||(41677098-41677315)
chr8 (306-525)||(15167336-15167555)
chr8 (306-525)||(15078721-15078938)
chr8 (305-507)||(34048630-34048830)
chr8 (308-525)||(7944447-7944664)
chr8 (310-466)||(30674330-30674485)
chr8 (308-506)||(39332333-39332527)
chr8 (335-478)||(8646215-8646356)
chr8 (317-525)||(34789796-34790004)
chr8 (308-525)||(11290145-11290367)
chr8 (323-496)||(5973047-5973219)
chr8 (412-521)||(5942661-5942771)
chr8 (338-504)||(25561448-25561613)
chr8 (312-483)||(23606558-23606728)
chr8 (307-507)||(14509904-14510105)
chr8 (317-483)||(45475821-45475986)
chr8 (318-483)||(13534622-13534785)
chr8 (318-483)||(13624162-13624325)
chr8 (412-509)||(5721537-5721634)
chr8 (324-483)||(30883333-30883493)
chr8 (412-507)||(23941119-23941214)
chr8 (305-387)||(5942766-5942848)
chr8 (317-483)||(2952152-2952320)
chr8 (333-525)||(8102875-8103067)
chr8 (317-483)||(10917395-10917560)
chr8 (312-483)||(23798189-23798360)
chr8 (315-404)||(34868108-34868198)
chr8 (325-481)||(41879187-41879341)
chr8 (312-483)||(42600786-42600957)
chr8 (308-404)||(38009076-38009173)
chr8 (317-483)||(3048450-3048616)
chr8 (308-361)||(38843420-38843473)
chr8 (317-481)||(5860675-5860841)
chr8 (317-483)||(37430091-37430257)
chr8 (308-403)||(34812682-34812783)
chr8 (305-369)||(29364468-29364532)
chr8 (333-369)||(4097822-4097858)
[»] chr2 (41 HSPs)
chr2 (304-507)||(21665622-21665823)
chr2 (305-507)||(16096987-16097188)
chr2 (318-507)||(11912691-11912880)
chr2 (324-525)||(12133977-12134182)
chr2 (304-507)||(24035466-24035668)
chr2 (308-509)||(28425632-28425835)
chr2 (333-525)||(38400758-38400950)
chr2 (308-507)||(13800469-13800668)
chr2 (308-525)||(16227291-16227510)
chr2 (309-505)||(7742055-7742255)
chr2 (310-404)||(22727384-22727478)
chr2 (417-507)||(37182649-37182739)
chr2 (344-483)||(29939823-29939961)
chr2 (358-483)||(9046032-9046157)
chr2 (305-392)||(37182738-37182824)
chr2 (308-404)||(11952514-11952609)
chr2 (314-404)||(44914835-44914924)
chr2 (342-483)||(26716131-26716273)
chr2 (317-483)||(4505897-4506063)
chr2 (422-507)||(11952644-11952729)
chr2 (317-483)||(6965010-6965174)
chr2 (317-483)||(3155220-3155386)
chr2 (412-501)||(22727530-22727619)
chr2 (412-483)||(24410440-24410511)
chr2 (305-404)||(42029226-42029329)
chr2 (304-483)||(3953009-3953186)
chr2 (312-483)||(10762495-10762664)
chr2 (317-452)||(34694009-34694143)
chr2 (317-452)||(34716421-34716555)
chr2 (317-452)||(40636172-40636306)
chr2 (309-369)||(12694795-12694855)
chr2 (412-483)||(12337476-12337547)
chr2 (308-481)||(8907002-8907176)
chr2 (314-507)||(10252387-10252587)
chr2 (317-402)||(1396632-1396718)
chr2 (358-452)||(5952692-5952783)
chr2 (312-483)||(27506669-27506839)
chr2 (425-525)||(29694344-29694440)
chr2 (304-369)||(37622276-37622341)
chr2 (342-402)||(8327701-8327761)
chr2 (412-483)||(7162787-7162858)
[»] chr1 (38 HSPs)
chr1 (308-525)||(39134644-39134864)
chr1 (308-498)||(10925878-10926067)
chr1 (308-507)||(38546960-38547158)
chr1 (308-507)||(45758485-45758685)
chr1 (308-507)||(5533303-5533501)
chr1 (304-525)||(26803921-26804135)
chr1 (308-506)||(6221670-6221865)
chr1 (306-525)||(43235690-43235911)
chr1 (317-483)||(5316695-5316860)
chr1 (317-483)||(44655756-44655921)
chr1 (312-483)||(17168971-17169141)
chr1 (317-483)||(14146315-14146480)
chr1 (358-483)||(23185442-23185566)
chr1 (308-507)||(33170750-33170940)
chr1 (317-483)||(16140070-16140235)
chr1 (342-483)||(4971576-4971716)
chr1 (412-483)||(27559652-27559723)
chr1 (342-483)||(41697095-41697235)
chr1 (304-481)||(38853539-38853717)
chr1 (314-483)||(50146311-50146479)
chr1 (313-483)||(1366808-1366976)
chr1 (317-483)||(50881445-50881609)
chr1 (318-483)||(51607374-51607538)
chr1 (317-483)||(5027564-5027731)
chr1 (312-480)||(40501717-40501885)
chr1 (312-483)||(9172950-9173121)
chr1 (312-483)||(9180932-9181103)
chr1 (323-473)||(35392295-35392442)
chr1 (412-483)||(6771806-6771877)
chr1 (312-483)||(19955732-19955902)
chr1 (412-477)||(21740964-21741029)
chr1 (342-448)||(6889661-6889765)
chr1 (342-448)||(6891507-6891611)
chr1 (317-483)||(3406433-3406599)
chr1 (317-483)||(3440221-3440387)
chr1 (367-402)||(17322606-17322641)
chr1 (308-367)||(24988406-24988465)
chr1 (433-481)||(13913530-13913578)
[»] scaffold1320 (1 HSPs)
scaffold1320 (306-525)||(1317-1534)
[»] chr5 (45 HSPs)
chr5 (304-525)||(11242237-11242457)
chr5 (308-486)||(26718871-26719048)
chr5 (308-486)||(26988615-26988792)
chr5 (334-522)||(1366474-1366662)
chr5 (345-507)||(2024600-2024762)
chr5 (313-507)||(34425883-34426076)
chr5 (304-507)||(2412068-2412266)
chr5 (311-505)||(2530823-2531015)
chr5 (374-525)||(14318373-14318523)
chr5 (304-525)||(10407422-10407643)
chr5 (374-525)||(36868864-36869015)
chr5 (309-525)||(40794249-40794464)
chr5 (338-509)||(10543652-10543820)
chr5 (308-518)||(24395706-24395916)
chr5 (312-481)||(38869289-38869457)
chr5 (304-525)||(22648656-22648874)
chr5 (308-404)||(35080694-35080788)
chr5 (310-507)||(33037760-33037958)
chr5 (358-483)||(23284034-23284158)
chr5 (312-483)||(16198719-16198890)
chr5 (317-483)||(34756296-34756462)
chr5 (317-483)||(16592005-16592170)
chr5 (314-495)||(15639635-15639817)
chr5 (318-482)||(31194544-31194706)
chr5 (317-481)||(36187810-36187973)
chr5 (317-483)||(27079015-27079182)
chr5 (317-481)||(22986488-22986652)
chr5 (318-483)||(30854333-30854498)
chr5 (412-483)||(9364295-9364366)
chr5 (308-506)||(17344937-17345135)
chr5 (412-506)||(41911642-41911736)
chr5 (317-483)||(15480021-15480185)
chr5 (412-480)||(28822367-28822435)
chr5 (412-483)||(19523203-19523274)
chr5 (354-404)||(606236-606288)
chr5 (317-483)||(2274894-2275060)
chr5 (308-369)||(27530611-27530672)
chr5 (318-482)||(31881364-31881528)
chr5 (313-365)||(22875060-22875112)
chr5 (412-483)||(16799352-16799423)
chr5 (412-483)||(27924086-27924157)
chr5 (412-483)||(40389561-40389632)
chr5 (412-482)||(7670929-7670999)
chr5 (412-463)||(7338023-7338074)
chr5 (245-301)||(32767213-32767269)
[»] chr3 (39 HSPs)
chr3 (307-525)||(26279504-26279723)
chr3 (322-525)||(52374622-52374824)
chr3 (309-525)||(28689287-28689502)
chr3 (317-483)||(8073272-8073437)
chr3 (308-507)||(54574748-54574950)
chr3 (308-507)||(49393074-49393269)
chr3 (309-507)||(25855405-25855601)
chr3 (308-448)||(23641242-23641382)
chr3 (318-482)||(36605973-36606136)
chr3 (341-525)||(8420290-8420476)
chr3 (312-483)||(43207167-43207336)
chr3 (417-525)||(29598072-29598179)
chr3 (317-483)||(18372486-18372655)
chr3 (317-483)||(34290569-34290735)
chr3 (317-483)||(47467691-47467857)
chr3 (333-483)||(3953846-3953995)
chr3 (317-483)||(21582778-21582945)
chr3 (317-482)||(36715957-36716123)
chr3 (312-483)||(37168374-37168545)
chr3 (317-483)||(38681026-38681192)
chr3 (312-483)||(44708484-44708654)
chr3 (317-483)||(54619136-54619302)
chr3 (308-505)||(32319082-32319276)
chr3 (305-525)||(42453376-42453590)
chr3 (317-481)||(27078501-27078666)
chr3 (317-481)||(27084298-27084463)
chr3 (342-483)||(53149272-53149413)
chr3 (342-483)||(9878646-9878786)
chr3 (308-451)||(50258548-50258690)
chr3 (412-481)||(53506912-53506981)
chr3 (412-483)||(42098808-42098879)
chr3 (312-478)||(54407083-54407252)
chr3 (417-507)||(789919-790009)
chr3 (312-398)||(48720439-48720525)
chr3 (308-366)||(52973437-52973495)
chr3 (312-483)||(50939162-50939332)
chr3 (318-362)||(29598175-29598219)
chr3 (419-483)||(29620423-29620487)
chr3 (451-507)||(52973379-52973435)
[»] scaffold1590 (1 HSPs)
scaffold1590 (324-507)||(199-381)
[»] chr6 (23 HSPs)
chr6 (308-521)||(2477510-2477722)
chr6 (304-507)||(20611773-20611973)
chr6 (312-480)||(17353964-17354132)
chr6 (317-483)||(33774124-33774291)
chr6 (412-521)||(21183703-21183813)
chr6 (317-483)||(21479501-21479668)
chr6 (358-506)||(6159422-6159568)
chr6 (317-483)||(13727332-13727498)
chr6 (317-483)||(20711653-20711819)
chr6 (312-483)||(27788618-27788787)
chr6 (318-449)||(27314113-27314244)
chr6 (317-483)||(21280552-21280718)
chr6 (311-483)||(28075790-28075965)
chr6 (308-469)||(30121783-30121941)
chr6 (358-483)||(34397864-34397988)
chr6 (358-483)||(19737667-19737791)
chr6 (412-482)||(1155877-1155947)
chr6 (304-373)||(27131120-27131189)
chr6 (415-507)||(4036931-4037023)
chr6 (412-483)||(24711027-24711098)
chr6 (308-395)||(27994850-27994936)
chr6 (342-481)||(235183-235323)
chr6 (322-403)||(4037524-4037604)
[»] scaffold0097 (1 HSPs)
scaffold0097 (306-498)||(38914-39108)
[»] scaffold0012 (1 HSPs)
scaffold0012 (333-492)||(206439-206597)
[»] scaffold0007 (1 HSPs)
scaffold0007 (308-525)||(230786-231001)
[»] scaffold0182 (1 HSPs)
scaffold0182 (308-521)||(23925-24130)
[»] scaffold0039 (1 HSPs)
scaffold0039 (312-483)||(106542-106713)
[»] scaffold0070 (1 HSPs)
scaffold0070 (317-483)||(1347-1512)
[»] scaffold0022 (2 HSPs)
scaffold0022 (304-507)||(40065-40270)
scaffold0022 (304-507)||(138125-138330)
[»] scaffold0003 (2 HSPs)
scaffold0003 (308-521)||(351260-351471)
scaffold0003 (457-525)||(350281-350349)
[»] scaffold0018 (1 HSPs)
scaffold0018 (412-507)||(173538-173633)
[»] scaffold0902 (1 HSPs)
scaffold0902 (324-404)||(4404-4484)
[»] scaffold0227 (2 HSPs)
scaffold0227 (323-404)||(16147-16228)
scaffold0227 (419-498)||(16016-16095)


Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 525
Target Start/End: Complemental strand, 23859533 - 23859034
Alignment:
Q  19 aagcttttgtcacatgtctaacacgtgggcgaggtgtgactgttagtgtataattcacatttaagtatatttatttgtaactaaatagagttagttcggt 118  Q
    ||||||||||||||||||||||||       |||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||| |||    
T  23859533 aagcttttgtcacatgtctaacac-------aggtatgactgttggtgtataattcagatttaagtatatttatttgtaactacatagagttagttaggt 23859441  T
Q  119 tgttatttggtagttgttaaagtagttagagaagttatagttcataactataactagagttagctattactagttagttaactacatattcaagtgtata 218  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  23859440 tgttatttggtagttgttaaagtagttagagaagttatagttaataactataactagagttagctattacaagttagttaactacagattcaagtgtata 23859341  T
Q  219 gttagtcttttaaacaggagctctataaagtttaaatatgataacatatcttatgtatcacacacaagttgaatccatttcaacggggtcgttcctacga 318  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  23859340 gttagtcttttaaataggaactctataaagtttaaatatgataacacatctcatgtatcacacacaagttgactccatttcaacaggtccgttcctacga 23859241  T
Q  319 atttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagat 418  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| |||| |||||||||||||||       |||||||    
T  23859240 atttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctatttaaa-ttttttaaaagat 23859142  T
Q  419 aaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacatccatcta 517  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  23859141 aaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaaaccaccctcccaaaaaaacacccaccta 23859042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 7398632 - 7398412
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaa-taaaaacgtattttattta--aaagaacaatgttctatttaaa 404  Q
    ||||||||||||  || ||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||||    
T  7398632 cgttcctacgaagctgtaggctcgactctgtaagtgaaaagagacccgtaataaaaataaaaacatattttttttataaaagaacaatgttctatttaaa 7398533  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa- 503  Q
           ||| ||||||||||| ||| | |||||||| |||||||| |||  |||||||||||||| |||||||||||| ||| |||||||||||||||     
T  7398532 ttttttgaaa-gataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctcaaaccaccctcccaaa 7398434  T
Q  504 aaaacatccatctaacaccaaa 525  Q
    ||||||||||  ||||||||||    
T  7398433 aaaacatccacgtaacaccaaa 7398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 27237348 - 27237545
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||       
T  27237348 cgttcctgtgaatttggaggctcgtctctataagtgaaaagagatccgtaataaaataacaa-gtattttttttaaaagaacaatgttctatttaaa-tt 27237445  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| |||| ||||||||| |||  | | |||  |||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  27237446 ttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccctcccaaaaaa 27237545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 336 - 525
Target Start/End: Original strand, 9021754 - 9021940
Alignment:
Q  336 tgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 435  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||  |||||||||| | |||||||||       ||||||||||||||||||| ||||    
T  9021754 tgtaagtgaaaagagacacgtaataaaataaaagcgtattttttt--aaagaacaatttgctatttaaatttttt-aaaagataaatacaatgtgccgta 9021850  T
Q  436 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacatccatctaacaccaaa 525  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||    
T  9021851 tatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga-cctcaaaccaccctcccaaaaaaacatccacctaacaccaaa 9021940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 12419419 - 12419617
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||| ||||  ||||||||| || |||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||       
T  12419419 cgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctatttaaa-tt 12419517  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||||||  | ||||| || |||||| ||||| |||||||||||||  | ||||||||||| ||| |||||||||||||||||||    
T  12419518 ttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctcaaaccaccctcccaaaaaa 12419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 521
Target Start/End: Original strand, 2611181 - 2611399
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 402  Q
    |||||||||||| ||||  |||||||||  |||| ||||||||||||    ||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  2611181 gggtcgttcctatgaatccggaggctcggttctgcaagtgaaaagaggcttgtaataaaataaaaaagtatttttttttaaaagaacaatgttctattta 2611280  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca 502  Q
    ||       ||||||||||||||| |||||||||||||||| ||||| |||   |||||||||| || ||||||||||||| ||| |||| | |||||||    
T  2611281 aatttttt-aaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctcaaacgatcctccca 2611379  T
Q  503 -aaaaacatccatctaacac 521  Q
     ||||||| ||| |||||||    
T  2611380 gaaaaacacccacctaacac 2611399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 475
Target Start/End: Complemental strand, 23744974 - 23744808
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||||||||||||  |||| |||||||||||||  |||||| |||||||||| ||||||| || ||||||||||||||||| |||||       
T  23744974 cgttcctacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaattaaa-tt 23744876  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtata 475  Q
        ||||||||||||||| ||| || ||||||||| |||||| ||| || |||||||||||||||||    
T  23744875 ttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 483
Target Start/End: Complemental strand, 38971430 - 38971257
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||| |||||||| | ||| |||| || |||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||| || ||||||||       
T  38971430 cgtttctacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtattttttttaaaagatcaatattttatttaaa--t 38971333  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
        ||||||||||||||| ||||||||||||||  ||||||| |||| ||||||||||||||||| ||| |||||    
T  38971332 ttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgagga 38971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 23020409 - 23020623
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||||||| ||||||| ||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||  ||||| |       
T  23020409 cgttcctacgaatctggaggc-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcatttaga-tt 23020506  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||||||||| || |||| |||||||||| | |||| ||||  ||||||||||||||||||||||||||| | | ||| || |||| |||||||    
T  23020507 ttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaatcatcctctcaaaaaa 23020605  T
Q  508 catccatctaacaccaaa 525  Q
    || | | |||||||||||    
T  23020606 cacctacctaacaccaaa 23020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 21763513 - 21763709
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||| ||| |||||||||   ||| ||||| |||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||       
T  21763513 cgttcctacaaatctggaggctctgttctataagtaaaaagagatccgtaataaaataaaaacgtattt--ttttaaagaacattgttctatttaaa-tt 21763609  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| || |||||||||||||||||||| |||  ||||||||||||||  || ||| | ||  || ||| |||||||||||||||    
T  21763610 ttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactaccagatgcatcaagaatctcaaatcaccctcccaaaaaa 21763709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 8171472 - 8171637
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||| |||||||| ||||||||| |||||||||||||| |       |||||    
T  8171472 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 8171570  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  8171571 ataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 8171637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 29077389 - 29077224
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  29077389 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 29077291  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||||||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  29077290 ataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgagga 29077224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 505
Target Start/End: Complemental strand, 36891728 - 36891560
Alignment:
Q  338 taagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 435  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||  ||||||| ||||||||||||| |       ||| ||| |||||||||||| |||    
T  36891728 taagtgaaaagaagtccgtgataaaataaaaacgtattttttttttaaaagaataatgttctatttatatttttt-aaatgatgaatacaatgtgttgta 36891630  T
Q  436 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
    ||||| || |||| |||||  ||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  36891629 tatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccatcctcccaaaa 36891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 316 - 440
Target Start/End: Original strand, 9014111 - 9014233
Alignment:
Q  316 cgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||||||||| |||||||| ||| ||||||||||||| ||||||||       ||||    
T  9014111 cgaattcggaggctcgactctataagtgaaaagaggcccgtaataaaataaaaccgtatttt-ttttaaagaacaatgttttatttaaa-ttttttaaaa 9014208  T
Q  416 gataaatacaatgtgtcgtatatat 440  Q
    |||||||||||||||| ||||||||    
T  9014209 gataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 525
Target Start/End: Original strand, 9014702 - 9014903
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||| |||| |||||||   ||||||||||||||||  ||||||| ||| || || |||| || ||||||||       |||||    
T  9014702 gaattcggaggctcggctctataagggaaaagaagcccgtaataaaataaaactgtatttttttttaatgatcaatcttttatttaaattttgt-aaaag 9014800  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacatccatc 515  Q
    ||||||||||||||||||||||||       |||||||  ||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||| ||| |    
T  9014801 ataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccctcccaaaaaaacacccacc 9014893  T
Q  516 taacaccaaa 525  Q
    ||||||||||    
T  9014894 taacaccaaa 9014903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 483
Target Start/End: Complemental strand, 8239871 - 8239691
Alignment:
Q  302 cggggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattt 401  Q
    ||||| ||| |||| ||||||||||||||| ||||| || |||||||||  |  | ||||||| |||||||||||| |||||||||  ||||||||||||    
T  8239871 cggggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctattt 8239772  T
Q  402 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    | |       |||| ||||||| |||||| |||||||||| | ||||||||||| ||||||| | ||||||||| |||||||    
T  8239771 atattttttaaaaa-ataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgagga 8239691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 18776698 - 18776862
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || ||||||||| || || ||||||| ||||  || |||| ||||||||| |||||||||||||| |       ||||    
T  18776698 gaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatttatatttttt-aaaa 18776796  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    ||||||||||| ||| |||||||||||| |||||||| || ||||||| |||||||||||||||||    
T  18776797 gataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgag 18776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 506
Target Start/End: Original strand, 6765604 - 6765802
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||| ||||||||||||  ||||||||   ||||||  |||||||||   |||||||||||||||| || |||| |   |||||||||||||||||||||    
T  6765604 gggttgttcctacgaatccggaggctcagttctgtagatgaaaagaggctcgtaataaaataaaaaagtttttttt---aaagaacaatgttctatttaa 6765700  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       ||||||||||||||| |||||||||||| ||  |||| |||||  ||||||||||||||||||| | ||| | ||| |||||||||| ||||    
T  6765701 atttttt-aaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctcaaaccacccttccaa 6765799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 483
Target Start/End: Original strand, 23550990 - 23551169
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    ||||||| |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||| |||||| || |||| | ||||| ||||||||     
T  23550990 gggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaaagcaatgatctatttat 23551089  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |       |||||||||||| || |||||||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  23551090 atttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 23551169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 525
Target Start/End: Complemental strand, 20153276 - 20153164
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatc 511  Q
    ||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||   || ||||||||||   ||||||||||    
T  20153276 aaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaaaccaccct-taaaaaaacatc 20153178  T
Q  512 catctaacaccaaa 525  Q
    || |||||| ||||    
T  20153177 cacctaacatcaaa 20153164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 5955614 - 5955515
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||| ||||||| |||| | ||||| |||| |||||||| ||||||||   ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5955614 gggttgttcctatgaatctagaggcccgacactgtaagtaaaaagagacaagtaataaaataaaaacgtattttttttaaaagagcaatgttctatttaa 5955515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 308 - 498
Target Start/End: Complemental strand, 12981502 - 12981315
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  ||||| |||  |||||| ||||||||||   |||||||||||||||| || |||||  |||||||| |||||||||||| ||       
T  12981502 cgttcctacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgtttttta--taaaagaagaatgttctattt-aattt 12981406  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 498  Q
        ||||||||||||||| ||  | |||||| ||| ||||| ||||  ||||||||||||| ||||| ||||||| ||| ||||||||||    
T  12981405 ttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaaaccaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 20091207 - 20091379
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnn 409  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||| ||||||| |||||||| |         
T  20091207 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctatttatattttt 20091306  T
Q  410 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
      |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  20091307 t-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 48983871 - 48983942
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  48983871 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgagga 48983942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 483
Target Start/End: Original strand, 38414795 - 38414974
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 402  Q
    ||||||| |||| ||||| ||||||||||||||| || ||||||||||   || ||||||| |||||||||||| ||  |||||| ||| |||||||||     
T  38414795 gggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctatttg 38414894  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |       |||||||||||| || ||| |||||||||| | ||||||||||  ||||||| ||||| |||||||||||||    
T  38414895 tatttttt-aaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgagga 38414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 26917651 - 26917715
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaa 368  Q
    ||||||||| ||||||| | |||||| |||||||||||||||||||| |||||||||||||||||    
T  26917651 gggtcgttcttacgaatctagaggcttgactctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 509
Target Start/End: Complemental strand, 18201313 - 18201115
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||| ||||||  ||||||||| ||||| |||||||| ||  ||||||||||||||||||  |||||| |||||| |||||||| ||||||||||       
T  18201313 cgttcccacgaatccggaggctcggctctgcaagtgaaa-gatgtccgtaataaaataaaaatatatttt-tttaaacgaacaatgatctatttaaa-tt 18201217  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||| ||||||||||  || | |||||||| | |||||| ||   ||||||||  |||| || ||||||||| ||| |||||||||||| ||||||    
T  18201216 ttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctcaaaccaccctcctaaaaaa 18201117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 525
Target Start/End: Original strand, 17800265 - 17800362
Alignment:
Q  429 tgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa-aaaacatccatctaacaccaaa 525  Q
    |||||||||||||   ||||||||||  |||||||||||||||||| ||||||||   | |||||||| |||||| |||||||||| |||||||||||    
T  17800265 tgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccaccatcccaagaaaacatccacctaacaccaaa 17800362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 463
Target Start/End: Complemental strand, 26254163 - 26254017
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| || ||  | ||||||||| || || ||||||| ||||| |||||| ||| |||||| |||||||||||||| |       ||||    
T  26254163 gaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatttatatttttt-aaaa 26254065  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaat 463  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  26254064 gataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 481
Target Start/End: Original strand, 10329333 - 10329506
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaann 406  Q
    |||||||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| || |||||||||||||| |      
T  10329333 cgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatttata-t 10329431  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
         |||||||||||| || ||| |||||||||| |  | |||||||  ||||||| |||||||||||||||||    
T  10329432 tttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgag 10329506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 483
Target Start/End: Original strand, 24525601 - 24525783
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaa----aagaacaatgttctat 399  Q
    ||||||| |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||      || |||||||||||||    
T  24525601 gggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttctat 24525700  T
Q  400 ttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||| |       |||||||||||| || ||| ||| |||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  24525701 ttatatttttt-aaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 24525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 483
Target Start/End: Original strand, 36902898 - 36903022
Alignment:
Q  355 gtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaa 454  Q
    ||||||||||||||||||||||| ||   |||||||||||||||||||||       || ||||||||||||  |||||||||||||   |||||| |||    
T  36902898 gtaataaaataaaaacgtattttttt---aagaacaatgttctatttaaa-ttttttaatagataaatacaagatgtcgtatatatgttgtacacctaaa 36902993  T
Q  455 tatgaaaatcactaccgtatacatgagga 483  Q
      ||||||||| ||| |||||||||||||    
T  36902994 ggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 28749784 - 28749715
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    ||||||||||||||| ||| |||||||||||| ||||| || || ||||||| ||||||||||||||||||    
T  28749784 aaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 483
Target Start/End: Original strand, 47984959 - 47985068
Alignment:
Q  374 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 473  Q
    |||| ||||||| | |||||||||||||| |       |||||| ||||| || ||| |||||||||||| ||||||||||  ||||||| || ||||||    
T  47984959 ttttttttaaaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgta 47985058  T
Q  474 tacatgagga 483  Q
    ||||||||||    
T  47985059 tacatgagga 47985068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 10955559 - 10955488
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||| || |  ||||||| |||||||||||||||||||    
T  10955559 aaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagga 10955488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 483
Target Start/End: Original strand, 12596315 - 12596385
Alignment:
Q  413 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||||| ||| |||||||||| | |||||||| |  ||||||| |||||||||| ||||||||    
T  12596315 aaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgagga 12596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 9e-59; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 36118383 - 36118598
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||| ||| ||||| || |||||||||||||||   |||||||||||||||||||||||| |||||| |||||||||||||||||||       
T  36118383 cgttcctacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtatttt-tttaaatgaacaatgttctatttaaattt 36118481  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||  ||||||||| | ||||||    
T  36118482 ttt-aaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctctaaccacccttcaaaaaaa 36118580  T
Q  508 catccatctaacaccaaa 525  Q
    |||||| |||||||||||    
T  36118581 catccacctaacaccaaa 36118598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 309 - 507
Target Start/End: Original strand, 39329317 - 39329514
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 408  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||        
T  39329317 gttcctacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaa-ttt 39329415  T
Q  409 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
       ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||  ||||||||||| ||||| | | |||||||||||||||||||    
T  39329416 tttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctcccaaaaaa 39329514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 521
Target Start/End: Complemental strand, 27112212 - 27112000
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||| |||||||||||||| |  ||||||| |||||| ||||||||||| |||||||       
T  27112212 cgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttt-tttaaacgaacaatgttcaatttaaattt 27112114  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca-aaaa 506  Q
        ||||||||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  27112113 ttt-aaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccagaaaa 27112015  T
Q  507 acatccatctaacac 521  Q
    ||| ||| |||||||    
T  27112014 acacccacctaacac 27112000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 313 - 506
Target Start/End: Complemental strand, 52468463 - 52468272
Alignment:
Q  313 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 412  Q
    ||||||||| ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||       |    
T  52468463 ctacgaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtatttt-tttaaaagaacaatgttctatttaaa-tttttta 52468366  T
Q  413 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
    |||||||||||||| ||| ||||||||||  ||||| |||||  |||||||||||||||||| |||||||| ||| |||||||| |||||||||    
T  52468365 aaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccaccttcccaaaaa 52468272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 324 - 525
Target Start/End: Complemental strand, 24397102 - 24396901
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaat 422  Q
    |||||||  |||||||||||||||||||   ||||||||||||||||||||||| ||| ||||||||||| || ||||||||       |||||||||||    
T  24397102 gaggctcagctctgtaagtgaaaagagacatgtaataaaataaaaacgtatttttttttaaaagaacaatattttatttaaatttttt-aaaagataaat 24397004  T
Q  423 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatccatctaacacc 522  Q
    | || |||  ||||||||| ||||||| ||||  |||||||||||| |||||||||||||| ||| |||| ||||||| |||||| ||||||||||||||    
T  24397003 ataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctcaaactaccctccaaaaaaaaatccatctaacacc 24396904  T
Q  523 aaa 525  Q
    |||    
T  24396903 aaa 24396901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 10041923 - 10042113
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 406  Q
    |||||||||||||  ||||| ||   ||||||||||||||||| |||||| |||||||||| |||| |||| ||||||||||||||||||||||||||      
T  10041923 cgttcctacgaatcgggaggttcagttctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaatt 10042022  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 498  Q
         |||| |||||||||| ||| ||||| |||| |||||||| |||| ||||||||||||||||||||| ||||| ||| ||| ||||||    
T  10042023 tttaaaaaa-ataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctcaaatcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 37744827 - 37745021
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaat--gttctattt 401  Q
    |||||||||||||| | |||||||||||| ||| |||||||||  ||||| ||||||||||||||||||| |||    |||| ||||||  |||||||||    
T  37744827 cgttcctacgaattcgaaggctcgactctataattgaaaagaggcccgtattaaaataaaaacgtattttttttttttaaaacaacaatatgttctattt 37744926  T
Q  402 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 496  Q
    |||       |||||||||||| || |||||| |||||||||||||| |||||  |||||||||||||||||||| |||||| ||| ||||||||    
T  37744927 aaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaaaccacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 403
Target Start/End: Complemental strand, 5893195 - 5893099
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaa 403  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  5893195 cgttcctacaaatttggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgtatttttttttaaaagaacaatgttctatttaa 5893099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 36178852 - 36178658
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||| |||||||| ||||   |||||||||||||||||| |||||||||| |       | |||| ||| | ||||||||||||||||||||       
T  36178852 cgttcctacaaatttggacgctcagttctgtaagtgaaaagagacccgtaataaatttttt---tttttttttttagagaacaatgttctatttaaatta 36178756  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatg-aggatccttaaaccaccctcccaaaaa 506  Q
        ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||  ||||||||||||||||||    
T  36178755 ttt-aaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaatcc--aaaccaccctcccaaaaa 36178659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 507
Target Start/End: Complemental strand, 40217411 - 40217217
Alignment:
Q  310 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnn 409  Q
    ||||||||||||  ||||||||  | |||||||||||||||   ||||||||||||||||||| |||| ||| |||||||| |   |||||||||         
T  40217411 ttcctacgaattcagaggctcggttttgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaagaacatta--ctatttaaattttt 40217314  T
Q  410 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
      |||||||||||| || ||||||||||||||||||||| ||||| |||||||||| || | |||||||||| | ||| |||||||||| ||||||||    
T  40217313 t-aaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacccttccaaaaaa 40217217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 43455464 - 43455629
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| |||||||||||||||  | ||||||||| || || ||||||| |||||||||| | ||||||||| |||||||||||||| |       |||||    
T  43455464 gaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtattatttttaaaagagcaatgttctatttatatttttt-aaaag 43455562  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  43455563 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 43455629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 499
Target Start/End: Original strand, 36362798 - 36362984
Alignment:
Q  313 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg--tattttatttaaaagaacaatgttctatttaaannnnnn 410  Q
    |||||||| | |||||  ||||||||||||||||||||| || ||||||||||||||    ||| || ||||||||||||||| ||| ||||||          
T  36362798 ctacgaatctagaggcctgactctgtaagtgaaaagagacccataataaaataaaaaaaaatatattttttaaaagaacaatgctctgtttaaatttttt 36362897  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc 499  Q
     ||||||||||||||| ||| ||||||||||| |||||||||||| || ||||||||||| ||||||| |||| ||| |||||||||||    
T  36362898 -aaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctcaaaccaccctc 36362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 298 - 525
Target Start/End: Complemental strand, 15735282 - 15735062
Alignment:
Q  298 tcaacggggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttct 397  Q
    ||||| ||| ||||||||| ||| || ||| |||| ||| |||||||||| ||   | || |||||||||||| |||||| ||||| |||||| ||||||    
T  15735282 tcaacagggccgttcctacaaatctgaaggttcgattctttaagtgaaaaaaggctc-tattaaaataaaaacatattttttttaagagaacagtgttct 15735184  T
Q  398 atttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccc 497  Q
    |||||||       |||||||||||||||   |||||||||     ||||||| ||| |||||||||| ||||||||||||||||| | | |||||||||    
T  15735183 atttaaatttttt-aaaagataaatacaagacgtcgtatat-----atacaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaaccaccc 15735090  T
Q  498 tcccaaaaaacatccatctaacaccaaa 525  Q
    ||| |||||||||||| |||||||||||    
T  15735089 tccaaaaaaacatccacctaacaccaaa 15735062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 465
Target Start/End: Original strand, 39655173 - 39655334
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctattta 402  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||   |||||||||||||||||| | | || || |||||||||||||||||||||    
T  39655173 gggtcgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaacgttctatttttaaaaagaacaatgttctattta 39655272  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatca 465  Q
    ||       ||||||||||||||| ||  || ||||||||| ||||||||||  |||||||||    
T  39655273 aa-ttttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 47129161 - 47128996
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| |||| ||||||| |||||||||||||||||||||||| |       |||||    
T  47129161 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttata-ttttttaaaag 47129063  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  47129062 ataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 47128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 51691844 - 51692039
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||   ||||||||||     | ||||||| ||||||||| ||||||||||||||||       
T  51691844 cgttcctacgaatccggaggctcggctctgcaagtgaaaagaggctcgtaataaaa-----atgtattttttttaaaagagcaatgttctatttaaattt 51691938  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaata--tgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
        ||||||||||||||| ||| |||||||||||| |||||| ||| |  |||||||||||||| |||||| || || ||| |||||||||||| ||||    
T  51691939 ttt-aaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctcaaaccaccctccgaaaa 51692037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30507039 - 30507142
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatt 400  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||| || |||||||||||||| |||   |||| ||||||||||||||||||||||    
T  30507039 gggtcgttcctacgaatccggaggctcgattttgtaagtgaaaagagacccataataaaataaaaatgtatttttttttttaaaagaacaatgttctatt 30507138  T
Q  401 taaa 404  Q
    ||||    
T  30507139 taaa 30507142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 312 - 478
Target Start/End: Complemental strand, 32128764 - 32128598
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||||||||||||| |||||  | |||||| || || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |          
T  32128764 cctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttt 32128665  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacat 478  Q
     |||||||||||| || |||||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  32128664 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 2790674 - 2790839
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | |||||||||| | || ||||||| ||||| | |||| |||||||||||||||||||||||| |       |||||    
T  2790674 gaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattttttttttaaaagaacaatgttctatttatatttttt-aaaag 2790772  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||| || ||  |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  2790773 ataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 2790839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 483
Target Start/End: Original strand, 54083176 - 54083340
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| || |||| ||||||| |||||||| |       ||||||    
T  54083176 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatatttttt-aaaaga 54083274  T
Q  418 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||| || ||| |||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  54083275 taaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgagga 54083340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 16845200 - 16845030
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| ||||| || |||||| ||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  16845200 cctaagaattcggaggctcggctctggaaatgaaaaaagc-cagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttt 16845102  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||||||||||||||   |||||||||   ||||||| |||||||||||||||||||    
T  16845101 aaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgagga 16845030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 34027758 - 34027588
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| | |||||||||||||| |           
T  34027758 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatatttttt- 34027660  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| ||||| |||||||||||||    
T  34027659 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgagga 34027588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 45656255 - 45656158
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaaca 509  Q
    ||||||||||| ||| ||||| ||||||||||||| | |||||| |||||||||| | ||||||||||| || ||| |||||||||||||||||||||    
T  45656255 aaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctcaaaccaccctcccaaaaaaca 45656158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 496
Target Start/End: Original strand, 4167918 - 4168002
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 496  Q
    ||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| |||||||||||| ||| ||| ||||    
T  4167918 aaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcacc 4168002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 54780953 - 54780786
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||| | |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  54780953 gaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 54780855  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  54780854 agataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 54780786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 38209523 - 38209689
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||||||||||||| ||||| || |||||||||  | || ||||||| ||||  || |||| ||| ||||| |||||||||||||| |       ||||    
T  38209523 gaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatatttttt-aaaa 38209621  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  38209622 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 38209689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 10979036 - 10978909
Alignment:
Q  358 ataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaa 454  Q
    ||||||| |||||||||||| |||   |||||| |||||||||||||| |       ||||||||||||||| |||||||||||||||| |||||||| |    
T  10979036 ataaaatcaaaacgtatttttttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgtcgtatatatgcggtacacccaga 10978938  T
Q  455 tatgaaaatcactaccgtatacatgagga 483  Q
      ||||||| |||||||||||||||||||    
T  10978937 agtgaaaatgactaccgtatacatgagga 10978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 35465280 - 35465116
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| |||||||||| ||||  | ||||||||| || || ||||||| ||||| |||||| ||||||||||||||||| |||||| |       | |||    
T  35465280 gaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatattttttttaaaagaacaatgttatatttata-ttttttacaag 35465182  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||| || ||| |||||||||||| |||||| |||  ||||||| |||||||||||||||||||    
T  35465181 ataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgagga 35465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 35779352 - 35779428
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcctt 488  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  ||||||| | ||||||||||||||||| ||||    
T  35779352 aaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacctt 35779428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 492
Target Start/End: Original strand, 2135294 - 2135428
Alignment:
Q  356 taataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaat 455  Q
    ||||||||||||||||| |||| ||| ||| |||||| |||||||||||       ||||||||||||||| ||||||||||||||||||||| |||||     
T  2135294 taataaaataaaaacgtttttttttttaaa-aacaatattctatttaaatttttt-aaaagataaatacaaggtgtcgtatatatgcgatacatccaaag 2135391  T
Q  456 atgaaaatcactaccgtatacatgaggatccttaaac 492  Q
     | || ||||||| |||||| ||||||| ||| ||||    
T  2135392 gtaaacatcactatcgtatatatgaggaacctcaaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 483
Target Start/End: Original strand, 37777156 - 37777321
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaac-aatgttctatttaaannnnnnnaaaag 416  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| |  |||| ||  ||||||||||||| |       |||||    
T  37777156 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctatttatatttttt-aaaag 37777254  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  37777255 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 37777321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 324 - 481
Target Start/End: Complemental strand, 1105699 - 1105543
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaata 423  Q
    |||||||| |||||  | ||||||||| || || ||||||| |||||||||||| |||||||||   |||||||||||| |       ||||||||||||    
T  1105699 gaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttttt-aaaagataaata 1105601  T
Q  424 caatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    ||| || ||||||||||||| |||||| | |  ||||||| |||||| ||||||||||    
T  1105600 caaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 13460287 - 13460216
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| |||||||||||||||| || ||||| || ||||||| |||||||||||||| ||||    
T  13460287 aaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataagga 13460216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 34768548 - 34768672
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||||||||| || ||| |||||||||||| |||||||| |  |    
T  34768548 ataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccagaggt 34768646  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
    |||||| | |||||||||||||||||    
T  34768647 gaaaatgattaccgtatacatgagga 34768672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 481
Target Start/End: Complemental strand, 48209374 - 48209251
Alignment:
Q  359 taaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaata 456  Q
    |||||| |||||||||||| |||  |||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||||| ||     
T  48209374 taaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccagatg 48209276  T
Q  457 tgaaaatcactaccgtatacatgag 481  Q
    |||| || |||||||||||||||||    
T  48209275 tgaatatgactaccgtatacatgag 48209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 4167846 - 4167915
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttt 377  Q
    ||||| |||||||  |||||||||| | |||||||||||||||  |||||||||||||||||||||||||    
T  4167846 cgttcgtacgaatccggaggctcgattttgtaagtgaaaagaggcccgtaataaaataaaaacgtatttt 4167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 11906826 - 11906895
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttt 377  Q
    |||||||||||||| ||||||||| || | |||||||||||||  ||||||||||||||||| |||||||    
T  11906826 cgttcctacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatgtatttt 11906895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 17679574 - 17679440
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| |||||||||  ||||  | |||||||||| | || ||||||| |||||||||||| ||||||||| |||| ||||||||| |       |||||    
T  17679574 gaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatattctatttata-ttttttaaaag 17679476  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    |||||||||| ||| |||||||||||| ||||||||    
T  17679475 ataaatacaaggtgccgtatatatgcggtacaccca 17679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 51964844 - 51964748
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn--aaaagataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |         ||||||||||||||| ||| |||||||||||||||||||||    
T  51964844 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacaccca 51964748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 404
Target Start/End: Complemental strand, 24614137 - 24614040
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaa 404  Q
    ||||| ||||||| |||||| ||  ||||||||||||||||||  |||||||||||| |||| |||  |||| ||| ||||||||||||||||||||||    
T  24614137 cgttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaat-aaaatgtatttttttttttaaagaacaatgttctatttaaa 24614040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 40089596 - 40089525
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  40089596 aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 40089525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 317 - 442
Target Start/End: Original strand, 16922260 - 16922386
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta--tttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    |||||||||||||||||| ||  | |||||||||| | || ||||||| ||||||| |||||  ||||||||| |||||||||||||| |       |||    
T  16922260 gaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctatttata-ttttttaaa 16922358  T
Q  415 agataaatacaatgtgtcgtatatatgc 442  Q
    ||||||||| || |||||||||||||||    
T  16922359 agataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 19498635 - 19498513
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||||||||| || ||| ||  |||||||| |||| |||||  |    
T  19498635 ataaaatcaaaacgtattttgtttaaaagagcaatgttctatttata-ttttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggt 19498539  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
    |||||| ||||| |||||||||||||    
T  19498538 gaaaatgactactgtatacatgagga 19498513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 37514739 - 37514671
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 480  Q
    ||||||||||||||| ||| |||||||||||| ||||| || |  ||||||| ||||||||||||||||    
T  37514739 aaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 5128869 - 5128940
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||||  | |||||| |  ||||||| |||||||||||||||||||    
T  5128869 aaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgagga 5128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 32915560 - 32915394
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||| | |||| ||||||||| | |||||||||||| |       ||||    
T  32915560 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctatttatatttttt-aaaa 32915462  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||| | |||||||| |  | ||||| | |||||||||||||||||    
T  32915461 gataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagga 32915394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 474
Target Start/End: Original strand, 16882323 - 16882484
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| ||||   | ||||||||  || || ||||||| |||||||||||| || |||| |||||||||||||||| |           
T  16882323 cctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgttctatttata-cttttt 16882421  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtat 474  Q
    |||||||||||| || ||| ||| ||||| || |||||| |||  ||||||| ||||||||||    
T  16882422 aaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 402
Target Start/End: Original strand, 38352193 - 38352283
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 402  Q
    |||| ||||| ||||||||| |||||  | |||||||||||| || ||||||| |||||||||||| ||| ||| |  |||| ||||||||    
T  38352193 cctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaaagtaatgatctattta 38352283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 40089712 - 40089614
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 402  Q
    ||||||| |||| ||||| ||||||||| ||||   | ||||||||  || || ||||||| |||||||||||| ||||||| | ||||||| ||||||    
T  40089712 gggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaaagcaatgttttattta 40089614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 452
Target Start/End: Original strand, 10428131 - 10428264
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | ||||||||| || ||  |||||| ||||  |||||| ||||||| | |||||||||||||| |       |||||    
T  10428131 gaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaa-agcaatgttctatttatatttttt-aaaag 10428228  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    |||||||||| ||| |||||||||||| ||||||||    
T  10428229 ataaatacaaggtgccgtatatatgcggtacaccca 10428264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 45305104 - 45305044
Alignment:
Q  307 tcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaa 367  Q
    |||||||||| |||| ||||| ||| |||| |||||||||||||||  ||| |||||||||    
T  45305104 tcgttcctacaaattcggaggttcggctctataagtgaaaagagatttgtagtaaaataaa 45305044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 6e-57; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 309 - 525
Target Start/End: Original strand, 41677098 - 41677315
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannn 407  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| |  |||||||||||||||||||||| ||| |||||||||||||||||||||||       
T  41677098 gttcctacgaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaattt 41677197  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||||||||||||  |||||||||||||||||||| | |||  ||||||||||||| ||||||||||||| ||| |||||||||||| ||||||    
T  41677198 ttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctccaaaaaaa 41677297  T
Q  508 catccatctaacaccaaa 525  Q
    || ||| |||||||||||    
T  41677298 cacccacctaacaccaaa 41677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 306 - 525
Target Start/End: Original strand, 15167336 - 15167555
Alignment:
Q  306 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaa 403  Q
    ||||||||||||||| || ||||||  ||||||||||||||| |  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15167336 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaa 15167435  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       |||||||||||| || |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||||||||| ||||    
T  15167436 atttttt-aaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacccttccaa 15167534  T
Q  504 aaaacatccatctaacaccaaa 525  Q
    |||| | ||| |||||||||||    
T  15167535 aaaa-acccacctaacaccaaa 15167555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 306 - 525
Target Start/End: Complemental strand, 15078938 - 15078721
Alignment:
Q  306 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 405  Q
    ||||||||||||||| || ||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||     
T  15078938 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaa- 15078840  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
          |||||||||||| || |||  |||||||||| |||||||||||| |||||||||||| |||||||||||||| ||| ||||||| || ||||||    
T  15078839 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacgcttccaaaa 15078740  T
Q  506 aacatccatctaacaccaaa 525  Q
    || || || |||||||||||    
T  15078739 aa-attcacctaacaccaaa 15078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 305 - 507
Target Start/End: Original strand, 34048630 - 34048830
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |   ||| ||| ||||||||||||||||||||||    
T  34048630 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatg---ttttttttaaagaacaatgttctatttaaa 34048726  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcg--tatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca 502  Q
           ||||||||||||||||||||||  |||||||  |||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||| |    
T  34048727 -cattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcctcataccaccctccaa 34048825  T
Q  503 aaaaa 507  Q
    |||||    
T  34048826 aaaaa 34048830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 7944447 - 7944664
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  ||| |||||| ||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||       
T  7944447 cgttcctacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttatttaaattt 7944546  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaa 506  Q
        |||| |||||||||| ||| ||||||||||   ||||||||||  ||||||||||||||||||||||||||| ||| |||||||| |||| |||||    
T  7944547 tttaaaaa-ataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaaaa 7944645  T
Q  507 acatccatctaacaccaaa 525  Q
    ||| ||| |||||||||||    
T  7944646 acacccacctaacaccaaa 7944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 466
Target Start/End: Original strand, 30674330 - 30674485
Alignment:
Q  310 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnn 409  Q
    ||||||||||| |||||||||| ||||||||||||||||||   |||||||||||||||||||||||| ||| ||||||||||||||||||||||         
T  30674330 ttcctacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaa-tgtt 30674428  T
Q  410 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcac 466  Q
      |||||||||||| || |||||||||||||||||||||| ||||  ||||||||||    
T  30674429 ttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 308 - 506
Target Start/End: Original strand, 39332333 - 39332527
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||| |||||||||  |||||| |||||||||||  |||||||||||||||| || |||| |   |||||||||||||||||||||        
T  39332333 cgttcctacgaattcggaggctcggttctgtaggtgaaaagagactcgtaataaaataaaaaagtttttttt---aaagaacaatgttctatttaa-ttt 39332428  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
        ||||||||||||||| ||||| |||||| ||| |||| |||||  ||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  39332429 tttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctctcaaaaa 39332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 335 - 478
Target Start/End: Complemental strand, 8646356 - 8646215
Alignment:
Q  335 ctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgt 434  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||       ||||||||||||||| || ||||    
T  8646356 ctgtaagtcaaaagagatccttaataaaataaaaacgtaatttttttaaaagaacaatgttctatttaaa-ttttttaaaagataaatacaaggtatcgt 8646258  T
Q  435 atatatgcgatacacccaaatatgaaaatcactaccgtatacat 478  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||    
T  8646257 atatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 317 - 525
Target Start/End: Original strand, 34789796 - 34790004
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    |||| |||| ||||| |||| |||||||||| || |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||       |||||    
T  34789796 gaatctggaagctcggctctataagtgaaaaaaggtccgtaataaaataaaaatgtattttttttaaaagaacgatgttctatttaaa-tctcttaaaag 34789894  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc-caaaaaacatccatc 515  Q
    ||||||||||  |||||||||||||   ||||||||||  ||||||||||||||||||||||||| |   | |||||||| |||  |||||||| ||| |    
T  34789895 ataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatcctaaaaaaacacccacc 34789994  T
Q  516 taacaccaaa 525  Q
    ||||||||||    
T  34789995 taacaccaaa 34790004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 525
Target Start/End: Complemental strand, 11290367 - 11290145
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-----aaaagaacaatgttctattta 402  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||||   ||||||||||||||| || |||| |||     |||||||||||||| ||||||    
T  11290367 cgttcctacgaattcagagactcgactttgtaagtgaaaagagacatgtaataaaataaaaatgtttttttttttttttaaaagaacaatgttttattta 11290268  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca 502  Q
    ||       ||||||||||||||| ||||||||||||||   ||||| ||||  ||||||||||||||||||||||||| | ||| |||||||| |||||    
T  11290267 aatttttt-aaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctcaaaccaccatccca 11290169  T
Q  503 a-aaaacatccatctaacaccaaa 525  Q
    | |||||||||| |||| ||||||    
T  11290168 acaaaacatccacctaataccaaa 11290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 323 - 496
Target Start/End: Original strand, 5973047 - 5973219
Alignment:
Q  323 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaat 422  Q
    ||||||| | |||||||| ||||||||| || ||||||||||||||| |||||   ||||||||||||||||||||||||||       |||||||||||    
T  5973047 ggaggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaa-ttttttaaaagataaat 5973145  T
Q  423 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 496  Q
    |||| ||||||||||||||   |||||||| | |||||||||| ||||||||||| ||||| ||| ||||||||    
T  5973146 acaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaaaccacc 5973219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 521
Target Start/End: Complemental strand, 5942771 - 5942661
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa-cat 510  Q
    |||||||||||||||  |||||||||| |||| ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||    
T  5942771 aaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccaaaaaagcat 5942672  T
Q  511 ccatctaacac 521  Q
    ||| |||||||    
T  5942671 ccacctaacac 5942661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 504
Target Start/End: Original strand, 25561448 - 25561613
Alignment:
Q  338 taagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 435  Q
    |||||||||||||  |||||| ||||||||||||||  |||| |||  ||||| |||||||||||||||        |||||||||||||| ||| ||||    
T  25561448 taagtgaaaagaggcccgtaacaaaataaaaacgtaatttttttttttaagaataatgttctatttaaatctttt--aaagataaatacaaggtgccgta 25561545  T
Q  436 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaa 504  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| ||| |||||||||| |||||    
T  25561546 tatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaaaccacccttccaaa 25561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 23606558 - 23606728
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | |||||||||| | || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  23606558 cctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-tttttt 23606656  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  | ||||| |||||||||||||||||||    
T  23606657 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgagga 23606728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 307 - 507
Target Start/End: Original strand, 14509904 - 14510105
Alignment:
Q  307 tcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatttaa 403  Q
    ||||||||||||||||||||  |||  |||| ||||||||| ||  ||||||||||||||||| |||   |||| ||| |||||||||||||| ||||||    
T  14509904 tcgttcctacgaatttggagattcggttctgcaagtgaaaataggcccgtaataaaataaaaatgtattttttttttttaaagaacaatgttcaatttaa 14510003  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatg-aaaatcactaccgtatacatgaggatccttaaaccaccctccca 502  Q
    |       |||||| ||||| || ||||||||||||  || ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| || ||    
T  14510004 a-ttttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacctcaaaccaccatctca 14510100  T
Q  503 aaaaa 507  Q
    |||||    
T  14510101 aaaaa 14510105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 45475986 - 45475821
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||| |  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  45475986 gaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 45475888  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  45475887 ataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagga 45475821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 483
Target Start/End: Original strand, 13534622 - 13534785
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  13534622 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaaga 13534720  T
Q  418 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13534721 taaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13534785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 483
Target Start/End: Original strand, 13624162 - 13624325
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  13624162 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaaga 13624260  T
Q  418 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13624261 taaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13624325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 5721634 - 5721537
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaaca 509  Q
    ||||||||||||||| ||| | ||||||  || ||||||||||  |||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  5721634 aaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaaccaccctcccaaaaaaca 5721537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 483
Target Start/End: Complemental strand, 30883493 - 30883333
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaa 421  Q
    |||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| ||||||||| |||||||||||||| |       ||||||||||    
T  30883493 gaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatatttttt-aaaagataaa 30883395  T
Q  422 tacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  30883394 tacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 30883333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 412 - 507
Target Start/End: Original strand, 23941119 - 23941214
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    ||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||| | | |||| | ||||| ||| |||||||||||||||||||    
T  23941119 aaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctcaaaccaccctcccaaaaaa 23941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 5942848 - 5942766
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaaga 387  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||||  ||||||||||||||||| ||||||| |||||||||    
T  5942848 ggtcgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatgtattttttttaaaaga 5942766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 2952152 - 2952320
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaannnnnnnaa 413  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || ||| |||   |||||| |||||||||||||| |       ||    
T  2952152 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttctatttatatttttt-aa 2952250  T
Q  414 aagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  2952251 aagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 2952320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 525
Target Start/End: Complemental strand, 8103067 - 8102875
Alignment:
Q  333 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatt--taaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtg 430  Q
    |||||||| |||||||||  |  |||||||||||||| ||||||| ||  ||||| || |||||| ||||||||       ||||||||||||||| |||    
T  8103067 ctctgtaaatgaaaagaggcctataataaaataaaaatgtatttttttcttaaaataataatgttatatttaaatttttt-aaaagataaatacaaggtg 8102969  T
Q  431 tcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatccatctaacaccaaa 525  Q
      ||||||||||| |||||| |||  ||||||||| ||||||||||||||||| ||| ||||| | ||   |||||||||||| |||||||||||    
T  8102968 cagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaaacc-ctcttaaaaaaaacatccacctaacaccaaa 8102875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 10917560 - 10917395
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| ||||||| |||||||| |       |||||    
T  10917560 gaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatatttttt-aaaag 10917462  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||| ||||||||||||    
T  10917461 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgagga 10917395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 23798189 - 23798360
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat-tttatttaaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| |||||  |  |||||||| ||  | ||||||| ||||||||| ||| ||| ||||| |||||||||||||| |          
T  23798189 cctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctatttatatttttt 23798288  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  23798289 -aaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 23798360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 404
Target Start/End: Original strand, 34868108 - 34868198
Alignment:
Q  315 acgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaa 404  Q
    |||||| | |||||||| ||| ||||||||||||||| || |||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  34868108 acgaatctcgaggctcggctccgtaagtgaaaagagacccataataaaataaaaacgtattttttttttaaagaataatgttctatttaaa 34868198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 481
Target Start/End: Complemental strand, 41879341 - 41879187
Alignment:
Q  325 aggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatac 424  Q
    ||||||| |||||  | ||||||||| |  || ||||||| |||||||||||| |||||||||||||||||||||||| |       |||||||||||||    
T  41879341 aggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtatttt-tttaaaagaacaatgttctatttatatttttt-aaaagataaatac 41879244  T
Q  425 aatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    || ||  |||||||||||| |||| |||||  ||||||| ||||||| |||||||||    
T  41879243 aaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgag 41879187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 42600957 - 42600786
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| ||||| || ||||||||| || || ||||||| ||||||| |||| ||| ||| || ||||| |||||||| |          
T  42600957 cctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatttatatttttt 42600858  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || ||| |||||||||| | ||||||||||  ||||||| |||||||||||||||||||    
T  42600857 -aaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 42600786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 38009076 - 38009173
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaac-gtattttatttaaaagaacaatgttctatttaaa 404  Q
    |||||||| ||||  |||||||||  ||||||| ||||||||  |||||||||||||||||||  | |||| ||||||||||||||||||||||||||    
T  38009076 cgttcctatgaatccggaggctcggttctgtaactgaaaagaagtccgtaataaaataaaaacttttttttttttaaaagaacaatgttctatttaaa 38009173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 3048450 - 3048616
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||| | ||||||| |       ||||    
T  3048450 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatttatatttttt-aaaa 3048548  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||| | | |||||||| ||||||||||||| |||||    
T  3048549 gataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgagga 3048616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 38843420 - 38843473
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataa 361  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  38843420 cgttcctacgaatttggaggctcggctctctaagtgaaaagaggtccgtaataa 38843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 5860675 - 5860841
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatttaaannnnnnnaa 413  Q
    ||||||||||||||| ||||| || ||||||||| ||  | ||||||| ||||| ||   |||  ||| ||||| |||||||||||||| |       ||    
T  5860675 gaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatatttttt-aa 5860773  T
Q  414 aagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    ||||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| ||||||||||    
T  5860774 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 5860841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 37430091 - 37430257
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  37430091 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 37430189  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||| | |  | ||||| |||||||||||||||||||    
T  37430190 gataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgagga 37430257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 403
Target Start/End: Original strand, 34812682 - 34812783
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt------aaaagaacaatgttctattt 401  Q
    ||||||||| |||  || ||||||||||||||||||||||||| |  || |||||||||||| ||||||| |||      ||||||||||| ||||||||    
T  34812682 cgttcctacaaatccgggggctcgactctgtaagtgaaaagaggtatgtcataaaataaaaatgtattttttttttttaaaaaagaacaatattctattt 34812781  T
Q  402 aa 403  Q
    ||    
T  34812782 aa 34812783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 29364532 - 29364468
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 369  Q
    |||||||||||||||||| ||| |||| |||||||||| |||||||| ||||   ||||||||||    
T  29364532 ggtcgttcctacgaatttagagactcggctctgtaagtaaaaagagacccgtttaaaaataaaaa 29364468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 369
Target Start/End: Complemental strand, 4097858 - 4097822
Alignment:
Q  333 ctctgtaagtgaaaagagatccgtaataaaataaaaa 369  Q
    |||||||| | ||||||||||||||||||||||||||    
T  4097858 ctctgtaaataaaaagagatccgtaataaaataaaaa 4097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 8e-53; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 304 - 507
Target Start/End: Original strand, 21665622 - 21665823
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||| |||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21665622 gggttgttcctacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtatttt-tttaaaagaacaatgttctatttaa 21665720  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       ||||||||||||||  |||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||  |||||||||||| ||    
T  21665721 a-ttttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccacaaaccaccctcctaa 21665819  T
Q  504 aaaa 507  Q
    ||||    
T  21665820 aaaa 21665823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 305 - 507
Target Start/End: Complemental strand, 16097188 - 16096987
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  16097188 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaa 16097089  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaa 504  Q
           ||||||||||||||| ||| ||||||||||   ||||||||||  ||||||| |||||| |||||||||||| ||| |||||||| | |||||    
T  16097088 -ttttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaaaccaccattccaaa 16096990  T
Q  505 aaa 507  Q
    |||    
T  16096989 aaa 16096987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 318 - 507
Target Start/End: Original strand, 11912691 - 11912880
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat-tttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    |||| ||||||||| |||| |||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||       ||||     
T  11912691 aattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctatttaaatttaaaaaaaa- 11912789  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||||||||| ||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  11912790 ataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctcaaaccaccctcccaaaaaa 11912880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 324 - 525
Target Start/End: Original strand, 12133977 - 12134182
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa---cgtattttatttaaaa-gaacaatgttctatttaaannnnnnnaaaagata 419  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||   |||||||| ||||||| |||||||||||||||||||       ||||||||    
T  12133977 gaggctcggttctgtaagtgaaaagaggtccgtaataaaataataagaacgtattttttttaaaaagaacaatgttctatttaaaaaattt-aaaagata 12134075  T
Q  420 aatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca-aaaaacatccatctaa 518  Q
    ||||||| ||  |||||||||||||||||||||||  |||||||||||||||||||||| |||| ||| |||||||||||||| |||||||| || ||||    
T  12134076 aatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctcaaaccaccctcccacaaaaacatacacctaa 12134175  T
Q  519 caccaaa 525  Q
    |||||||    
T  12134176 caccaaa 12134182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 304 - 507
Target Start/End: Original strand, 24035466 - 24035668
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    ||||| |||||||||||  ||| |||||| | ||||||||||||||   ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  24035466 gggtcattcctacgaatccggatgctcgattttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctatttaa 24035565  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       ||||||||||||||| ||| |||||| |||||||||||| |||  ||||||||||||||| |||||||||||  |  |||||||||||||||    
T  24035566 a-ttttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctcccaa 24035664  T
Q  504 aaaa 507  Q
    ||||    
T  24035665 aaaa 24035668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 28425632 - 28425835
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaa 404  Q
    ||||||||||||||  ||||||||  | ||||| ||||||||| |||||||||||||||||| ||||||| |||   |||||||||||||||||||||||    
T  28425632 cgttcctacgaattcagaggctcgtttttgtaaatgaaaagaggtccgtaataaaataaaaatgtatttttttttttaaaagaacaatgttctatttaaa 28425731  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaa 504  Q
           ||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||| ||| || || ||||||||||    
T  28425732 aatttt-aaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctcaagcctccctcccaaa 28425830  T
Q  505 aaaca 509  Q
    |||||    
T  28425831 aaaca 28425835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 333 - 525
Target Start/End: Complemental strand, 38400950 - 38400758
Alignment:
Q  333 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 432  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| || |||| |||||||||||||||||||||       ||||||||||||||| |||||    
T  38400950 ctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaatttttt-aaaagataaatacaaggtgtc 38400852  T
Q  433 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc-ccaaaaaacatccatctaacaccaaa 525  Q
     |||||||||||||||  ||||  ||||||||||||||||||||||||||| ||| |||||||||||   |||||||| ||| |||||||||||    
T  38400851 atatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcttaaaaaaacacccacctaacaccaaa 38400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 13800469 - 13800668
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||| ||||||||| | || ||||||||||||||||||||||| | |||||||||||||||| ||||||| || |||||||||||||||||||||||       
T  13800469 cgtttctacgaattcgaagactcgactctgtaagtgaaaagaggttcgtaataaaataaaaatgtatttttttaaaaagaacaatgttctatttaaa-tt 13800567  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacaccc-aaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
        |||||||||||| || ||| |||||||||||||||||||| |||  |||||||||||||  |||||| ||||| ||| ||| |||| |||||||||    
T  13800568 ttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacctcaaatcaccttcccaaaaa 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 16227291 - 16227510
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat---tttatttaaaagaacaatgttctatttaaa 404  Q
    |||||||||||||| ||||||||   |||||||||||||||||| || ||||||||||||||| |||   ||| ||| |||||||||| |||||||||||    
T  16227291 cgttcctacgaattcggaggctcagttctgtaagtgaaaagaga-ccttaataaaataaaaacatatattttttttttaaagaacaattttctatttaaa 16227389  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaa 504  Q
           ||||||||||||||| |||||||||||||| |||||||| | | ||||||||||||||  ||||||| |||| ||| ||||||||||||||||    
T  16227390 tttttt-aaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctcaaaccaccctcccaaa 16227488  T
Q  505 aaa-catccatctaacaccaaa 525  Q
    ||| || ||| |||||||||||    
T  16227489 aaaccacccacctaacaccaaa 16227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 505
Target Start/End: Original strand, 7742055 - 7742255
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaatgttctatttaaa 404  Q
    ||||||||||||  ||||| |||  |||||||||||||||||  |||| |||||||||||||  || ||||||    ||||||||||||||||||||| |    
T  7742055 gttcctacgaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaacacatattatttttttaaaagaacaatgttctatttata 7742154  T
Q  405 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaa 504  Q
           ||||||||||||||||||||| |||||||||| |||| |||||  ||||||  |||| ||||| |||||||| ||| ||||||| ||||||||    
T  7742155 tttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctcaaaccactctcccaaa 7742254  T
Q  505 a 505  Q
    |    
T  7742255 a 7742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 22727384 - 22727478
Alignment:
Q  310 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    |||||||||||| ||||||||||| ||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22727384 ttcctacgaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtattttttttaaaagaacaatgttctatttaaa 22727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 37182739 - 37182649
Alignment:
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccctcccaaaaaa 37182649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 344 - 483
Target Start/End: Original strand, 29939823 - 29939961
Alignment:
Q  344 aaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcg 443  Q
    ||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       | ||||||||||||| ||||||||||||||||    
T  29939823 aaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-acaagataaatacaaggtgtcgtatatatgcg 29939921  T
Q  444 atacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     ||||||||||  ||||||| |||||||||||||||||||    
T  29939922 gtacacccaaaggtgaaaatgactaccgtatacatgagga 29939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 9046157 - 9046032
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| |||||||||| | |||||||||||||||||||||||| |       |||||||||||| || ||| |||||||||||| ||||||||||  |    
T  9046157 ataaaatcaaaacgtattgtttttaaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggt 9046058  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
    |||||| |||||||||||||||||||    
T  9046057 gaaaatgactaccgtatacatgagga 9046032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 37182824 - 37182738
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaat 392  Q
    ||||||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  37182824 ggtcgttcctaagaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaacgtatttt-tttaaaagaacaat 37182738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 11952514 - 11952609
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    ||||||||||||| || |||||||  |||||||||||||||||| |||||||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  11952514 cgttcctacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacat-tttttttttaaagaacaatgttctatttaaa 11952609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 404
Target Start/End: Original strand, 44914835 - 44914924
Alignment:
Q  314 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    |||||||| | ||||||  |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  44914835 tacgaattcgaaggctcagctctgtaagtgaaaagaggtccgtaataaaataaaaatgtacttt-tttaaaagaacaatgttctatttaaa 44914924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 483
Target Start/End: Complemental strand, 26716273 - 26716131
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatat 440  Q
    ||||||||| || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |       |||||||||||| || ||| | |||||||    
T  26716273 tgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatat 26716174  T
Q  441 gcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||| ||||||||||  ||||||| |||||||||||||||||||    
T  26716173 gcggtacacccaaaggtgaaaatgactaccgtatacatgagga 26716131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 4506063 - 4505897
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  4506063 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 4505965  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  4505964 gataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 4505897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 422 - 507
Target Start/End: Original strand, 11952644 - 11952729
Alignment:
Q  422 tacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    ||||| |||||||||||||| ||||||| || | |||||||||||||| | ||||||||||| ||| |||||||||||||||||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccctcccaaaaaa 11952729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 6965174 - 6965010
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||   ||||| ||||||||| |||||||||||||| |       |||||    
T  6965174 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaata-attttttttaaaagagcaatgttctatttatatttttt-aaaag 6965077  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  6965076 ataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 6965010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 3155386 - 3155220
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| || |  || ||||||||| || || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  3155386 gaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 3155288  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  3155287 gataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 3155220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 22727530 - 22727619
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc 501  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||  |||||||||||||| |||||||||  | ||| |||||||| ||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaaccaccatccc 22727619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 24410511 - 24410440
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  24410511 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 24410440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 42029329 - 42029226
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta----aaagaacaatgttctatt 400  Q
    ||||||||||| |||| ||||||||||  | ||||||||||||||| | |||||||| ||||||| ||||||| |||     ||||||||||||||||||    
T  42029329 ggtcgttcctaagaatctggaggctcggttttgtaagtgaaaagaggttcgtaataatataaaaatgtatttttttttttttaaagaacaatgttctatt 42029230  T
Q  401 taaa 404  Q
    ||||    
T  42029229 taaa 42029226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 483
Target Start/End: Complemental strand, 3953186 - 3953009
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    ||||||| |||  ||||||||||||||| || || || ||||||||| || || ||||||| |||| ||||||| |||||| || | ||||||||||||     
T  3953186 gggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtattttttttaaa-gaccgatgttctatttat 3953088  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |       ||||||||||||||| ||| |||||| ||||| |||||||| |  ||||||| | |||||||| ||||||||    
T  3953087 atttttt-aaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgagga 3953009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 10762495 - 10762664
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||||||||||||  |||||  | |||||||||  | || ||||||| ||||||| |||| |||||| || |||||||||||||| |           
T  10762495 cctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgttttttttttaaa-gagcaatgttctatttatatttttt- 10762592  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||  ||||||||| | ||||||||||  ||||||| |||||||||||||||||||    
T  10762593 aaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 10762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 34694143 - 34694009
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||| |||  |||| || |||||||||  |||| ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  34694143 gaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 34694045  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    |||||||||| ||| |||||||||| | ||||||||    
T  34694044 ataaatacaaggtgccgtatatatgtggtacaccca 34694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 34716555 - 34716421
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||| |||  |||| || |||||||||  |||| ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  34716555 gaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 34716457  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    |||||||||| ||| |||||||||| | ||||||||    
T  34716456 ataaatacaaggtgccgtatatatgtggtacaccca 34716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 40636306 - 40636172
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||  |||||  | |||||||||  | || ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||    
T  40636306 gaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttttt-aaaag 40636208  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    |||||||||| |||||||||||||||| ||||||||    
T  40636207 ataaatacaaggtgtcgtatatatgcggtacaccca 40636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 12694855 - 12694795
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 369  Q
    |||| |||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12694855 gttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 12694795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 12337476 - 12337547
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||||| |||||||| | |||||||| |  ||||||| |||||||||||||||||||    
T  12337476 aaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagga 12337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 481
Target Start/End: Original strand, 8907002 - 8907176
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaan 405  Q
    |||||||  ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| |||||||||  ||||||||||||| |     
T  8907002 cgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctatttatat 8907101  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
          ||||||||||||||| | | |||||||||||| |||||||| |  | ||||| |||||||||||||||||    
T  8907102 ttttt-aaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 8907176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 507
Target Start/End: Complemental strand, 10252587 - 10252387
Alignment:
Q  314 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaa 413  Q
    |||||||  ||||||||| | | ||||||||||||||    |||||||||||||||| |||||| ||| |||||| ||||||| |||||||       ||    
T  10252587 tacgaatcaggaggctcggcacggtaagtgaaaagaggcgtgtaataaaataaaaacatatttttttttaaagaaaaatgttcaatttaaa-ttttttaa 10252489  T
Q  414 aagataaatacaatgt---gtcgtatatatgcgatacacccaaatatgaaaatcac-----taccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
    ||||||||||||| ||   ||||||||||| | | |||||||||  |||||| |||     || | |||||||||||| ||| |||||||||||| ||||    
T  10252488 aagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgaggaacctcaaaccaccctccaaaaa 10252389  T
Q  506 aa 507  Q
    ||    
T  10252388 aa 10252387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 1396632 - 1396718
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgt-attttatttaaaagaacaatgttctattta 402  Q
    ||||| ||||||||||||||| || |||||||||  | || ||||||| ||||| | ||||| ||||||||| ||||||||||||||    
T  1396632 gaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattta 1396718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 5952692 - 5952783
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacaccca 452  Q
    ||||||| |||||||||||| ||||||||| ||||||| ||||||         ||||||||||||||| ||| |||||||||||| ||||||||    
T  5952692 ataaaatcaaaacgtattttttttaaaagagcaatgttatattta---ttttttaaaagataaatacaaggtgccgtatatatgcggtacaccca 5952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 27506669 - 27506839
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |  |||| | ||||| |||||||| |           
T  27506669 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaagcaatgatctatttatatttttt- 27506767  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||| | ||||||||||  | ||||| ||||| |||||||||||||    
T  27506768 aaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgagga 27506839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 525
Target Start/End: Complemental strand, 29694440 - 29694344
Alignment:
Q  425 aatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacatccatctaacacca 523  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||     |||||||||| | ||| |||||||  |||| |||||||| ||| |||||||||    
T  29694440 aatgtgttgtatatacgcgatacacccaaatgtgaaaatcac-----tatacatgagaaacctcaaaccactatcccaaaaaaacacccacctaacacca 29694346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 304 - 369
Target Start/End: Original strand, 37622276 - 37622341
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 369  Q
    |||||||||| || ||||||||||||||||  |||||||||||| || |  |||||||||||||||    
T  37622276 gggtcgttccaacaaatttggaggctcgacattgtaagtgaaaaaaggtatgtaataaaataaaaa 37622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 8327761 - 8327701
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 402  Q
    |||||||||||| || ||||||| |||||||||||| ||||||| | ||||| ||||||||    
T  8327761 tgaaaagagatcagtgataaaatcaaaacgtattttttttaaaaaagcaatgatctattta 8327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 7162858 - 7162787
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||||| || || || |  ||||||| ||||||||||| |||||||    
T  7162858 aaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgagga 7162787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 39134644 - 39134864
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaan 405  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||||     
T  39134644 cgttcctacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatttaaat 39134743  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaa 504  Q
          ||||||||||||||| |||  |||||||||| |||||||||||  ||| ||||||||| ||||||||||||| ||| ||||||||||||| |||    
T  39134744 tttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacctcaaaccaccctcccaaaa 39134843  T
Q  505 aaacatccatctaacaccaaa 525  Q
    ||||| ||| |||||||||||    
T  39134844 aaacacccacctaacaccaaa 39134864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 10925878 - 10926067
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||| ||||||||||||||||||| ||||||||||||   |||||||||||||||||| |||||| |||||||||||||| ||||||||||        
T  10925878 cgttcctacaaatttggaggctcgactctctaagtgaaaagaagcccgtaataaaataaaaacttatttt-tttaaaagaacaatattctatttaagtat 10925976  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 498  Q
        |||| |||||||||||||| |||||||||| ||| || ||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  10925977 ttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcctcaaatcaccct 10926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 38546960 - 38547158
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |  ||||||||||||||||| | ||||| ||| ||||| ||||||||||||||||       
T  38546960 cgttcctacgaatttggaggatcggctctgcaagtgaaaaggggcccgtaataaaataaaaaggaatttttttttaaagatcaatgttctatttaaattt 38547059  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| ||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||||||||||||    
T  38547060 ttt-aaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctcaaaccaccctcccaaaaaa 38547158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 45758685 - 45758485
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg--tattttatttaaaagaacaatgttctatttaaan 405  Q
    |||||||||||||   |||||||| |||||||||||||||||| |||| ||||||||||||| |  |||||| ||||||||||||||||||||||||||     
T  45758685 cgttcctacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaa- 45758587  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
          ||||||||||| ||| |||| |||||||||  ||||| |||||  ||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  45758586 ttttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaa 45758487  T
Q  506 aa 507  Q
    ||    
T  45758486 aa 45758485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 5533501 - 5533303
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||| ||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||       
T  5533501 cgtttctacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatgtatttt-tttaaaagaacaatattctatttaaattt 5533403  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||||||| |||| ||| ||||||||||   ||||  ||||  |||||||||||||||||||||||||||  || |||||||| ||||||||||    
T  5533402 ttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaaccaccatcccaaaaaa 5533303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 304 - 525
Target Start/End: Complemental strand, 26804135 - 26803921
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    ||||||||||||  ||| ||||| || || ||||||| ||||||||| ||||||||||||| |||||||||||| ||  ||||||||||| | |||||||    
T  26804135 gggtcgttcctataaatctggagacttgattctgtaa-tgaaaagaggtccgtaataaaatgaaaacgtattttttt--aaagaacaatgctatatttaa 26804039  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       |||||||||||||||  |||||||||||||||||||||   ||  ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  26804038 atttttt-aaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccctcccaa 26803943  T
Q  504 aaaacatccatctaacaccaaa 525  Q
    ||||||  || |||||||||||    
T  26803942 aaaacactcacctaacaccaaa 26803921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 506
Target Start/End: Complemental strand, 6221865 - 6221670
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||| |||||||| ||||| ||||  ||||||| |||||||||| |||||||||||||||||  |||||| ||| ||||||||||||||||||||||       
T  6221865 cgtttctacgaatctggagactcggttctgtaaatgaaaagagacccgtaataaaataaaaatttatttt-ttttaaagaacaatgttctatttaaa--t 6221769  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
        ||||||||||||||||||| |||||||| ||| |||| | |||| ||||||||| || |||||| ||||||| ||| |||||||||| |||||||    
T  6221768 ttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctcaaaccacccttccaaaaa 6221670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 306 - 525
Target Start/End: Original strand, 43235690 - 43235911
Alignment:
Q  306 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 405  Q
    |||||||||||||||  | |  ||||||| |||||||||||||||  | ||||||||||||||| ||||||| ||  |||||| |||||||||||||||     
T  43235690 gtcgttcctacgaatccgaatactcgactttgtaagtgaaaagaggcctgtaataaaataaaaatgtatttttttctaaagaaaaatgttctatttaaat 43235789  T
Q  406 nnnnnna-aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aa 503  Q
            ||||||||||||||  |||||||||||||   ||||||||||  |||||||||||| |||||||||||||| ||| |||||||| |||| ||    
T  43235790 ttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccatcccaaa 43235889  T
Q  504 aaaacatccatctaacaccaaa 525  Q
    |||||||| | |||||||||||    
T  43235890 aaaacatcaacctaacaccaaa 43235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 5316860 - 5316695
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    |||||||||||||||||  |   | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  5316860 gaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 5316762  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  5316761 ataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 5316695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 44655921 - 44655756
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||| || |||||||||| | || ||||||| ||||| || ||| ||||||||| |||||||||||||| |       |||||    
T  44655921 gaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataatttttttaaaagagcaatgttctatttatatttttt-aaaag 44655823  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||||||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  44655822 ataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 44655756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 17169141 - 17168971
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| ||||| || ||||||||| || || ||||||| |||||||||||| || |||| | |||||||||||||| |           
T  17169141 cctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatatttttt- 17169043  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||| ||||||||||| ||||||||||  ||||||| |||||| ||||||||||||    
T  17169042 aaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgagga 17168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 14146480 - 14146315
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||   | |||||||||  | || ||||||| |||||||||||| ||||||||| | |||||||||||| |       |||||    
T  14146480 gaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatatttttt-aaaag 14146382  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  14146381 ataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 14146315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 23185566 - 23185442
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||||| |  |    
T  23185566 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccataggt 23185468  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
    |||||| |||||||||||||||||||    
T  23185467 gaaaatgactaccgtatacatgagga 23185442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 33170940 - 33170750
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaat-aaaaacgtatt-ttatttaaaagaacaatgttctatttaaan 405  Q
    |||||||||||||||| ||||||||||||| |||||| |||          |||||| ||||| ||||| || ||||||| ||||||||| ||||||||     
T  33170940 cgttcctacgaatttgaaggctcgactctgcaagtgagaag----------taaaataaaaaatgtattcttttttaaaaaaacaatgttatatttaaat 33170851  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
          ||| | |||||||||||||| ||||||||||| |||||| ||   ||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  33170850 tttttaaaacg-taaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaaccttaaaccaccctcctaaaa 33170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 16140235 - 16140070
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||||||||   |||||||||||| |       |||||    
T  16140235 gaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttttt-aaaag 16140137  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||| ||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  16140136 ataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 16140070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 4971576 - 4971716
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 441  Q
    |||||||||| | || ||||||| ||||| |||||| ||| ||||| |||||||||||||| |       ||||||||||||||| ||  ||||||||||    
T  4971576 tgaaaagagaccagtgataaaatcaaaacatatttttttttaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtaccgtatatatg 4971674  T
Q  442 cgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    || |||||||| |  ||||||| |||||||||||||||||||    
T  4971675 cggtacacccataagtgaaaatgactaccgtatacatgagga 4971716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 27559723 - 27559652
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  27559723 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 27559652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 41697095 - 41697235
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 441  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| | |||||||||||| |       ||||||||||||||| || |||||||||||    
T  41697095 tgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatatttttt-aaaagataaatacaaagtatcgtatatatg 41697193  T
Q  442 cgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |  |||| ||| |  ||||||| |||||||||||||||||||    
T  41697194 cagtacatccagaagtgaaaatgactaccgtatacatgagga 41697235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 481
Target Start/End: Complemental strand, 38853717 - 38853539
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctattt 401  Q
    |||||||| ||||||| |  ||| |||| |||| ||||||||| |||   | |||||||||||||| ||||||| |||  ||||||||| ||||||||||    
T  38853717 gggtcgtttctacgaaatcagagactcggctctataagtgaaatgaggcacataataaaataaaaatgtattttttttttaaaagaacagtgttctattt 38853618  T
Q  402 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||       ||| ||||||||||| ||||||||||||||   || | |||||  |||||||||||||||||||||||||    
T  38853617 aaatttttt-aaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 483
Target Start/End: Complemental strand, 50146479 - 50146311
Alignment:
Q  314 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaata-aaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 412  Q
    |||||||| ||||||||| |||||||| ||||| |||| || | |||||||| |||| ||| ||| ||||||||||||||||||||||||||            
T  50146479 tacgaattcggaggctcggctctgtaaatgaaacgagacccatgataaaataaaaaatgtacttt-tttaaaagaacaatgttctatttaaactttttg- 50146382  T
Q  413 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| ||| ||| |||||| |||| |||||||  | ||||||| |||| ||||||||||||    
T  50146381 aaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagga 50146311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 483
Target Start/End: Original strand, 1366808 - 1366976
Alignment:
Q  313 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 412  Q
    ||||||||||||||||||  |||||  | |||||||||  | || ||||| | ||||| |||||| ||| || || |||||||||||||| |       |    
T  1366808 ctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatatttttttttaa-gagcaatgttctatttatatttttt-a 1366905  T
Q  413 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| || ||| |||||||||||| |||||||||| |||||||| ||||||||||||| |||||    
T  1366906 aaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgagga 1366976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 50881609 - 50881445
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||  |||||| ||||||||| |||||||||||||| |       |||||    
T  50881609 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctatttt-tttaaaagagcaatgttctatttatatttttt-aaaag 50881512  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||||||||||||||| |||| | | |  ||||||| ||||| |||||||||||||    
T  50881511 ataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgagga 50881445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 483
Target Start/End: Original strand, 51607374 - 51607538
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||| || |||||| |||||| |       ||||||    
T  51607374 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaaaaaaaatgttttatttatatttttt-aaaaga 51607471  T
Q  418 taaatacaatgtgtc-gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||| || ||| | ||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  51607472 taaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgagga 51607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 5027731 - 5027564
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||||||||| |  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  5027731 gaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 5027633  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| |||| |||||||    
T  5027632 agataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagga 5027564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 480
Target Start/End: Original strand, 40501717 - 40501885
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaac-aatgttctatttaaannnnnn 410  Q
    |||| ||||| |||||||||||||||  | ||||||||| || || ||||||| |||||||||||| |  |||| ||  |||| |||||||| |          
T  40501717 cctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatctatttatatttttt 40501816  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 480  Q
     |||||||||||| || |||||||||||||||| ||||||||||  | ||||| ||||||||||||||||    
T  40501817 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 9172950 - 9173121
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta-tttaaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||| |||||| |||||||  ||| ||| |||||||||||||||| |          
T  9172950 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatttatatttttt 9173049  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  9173050 -aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9173121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 9180932 - 9181103
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta-tttaaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||| |||||| |||||||  ||| ||| |||||||||||||||| |          
T  9180932 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatttatatttttt 9181031  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  9181032 -aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9181103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 473
Target Start/End: Complemental strand, 35392442 - 35392295
Alignment:
Q  323 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaat 422  Q
    |||| |||||||||||||||||||| |  ||| ||||||||||||||  | |||| |||||||||| |||||| ||||||||        || |||||||    
T  35392442 ggagactcgactctgtaagtgaaaaaatgtccataataaaataaaaatat-ttttttttaaaagaataatgttttatttaaatttttt--aaggataaat 35392346  T
Q  423 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 473  Q
    |||| ||| |||||||||||| || | |||||  |||||||||||||||||    
T  35392345 acaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 6771877 - 6771806
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||||| |||||||| |  ||||||| ||||||||||||| |||||    
T  6771877 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgagga 6771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 19955902 - 19955732
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||| ||||| ||| ||| | ||||| |||||||| |           
T  19955902 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaaagcaatgatctatttatatttttt- 19955804  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||  |||||||||||| ||||||||||  ||||||| ||||||||||| |||||||    
T  19955803 aaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 19955732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 477
Target Start/End: Original strand, 21740964 - 21741029
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtataca 477  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |  ||||||| |||||| ||||||    
T  21740964 aaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 6889765 - 6889661
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 441  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| || |||||||||||    
T  6889765 tgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaagtatcgtatatatg 6889668  T
Q  442 cgataca 448  Q
    || ||||    
T  6889667 cggtaca 6889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 448
Target Start/End: Complemental strand, 6891611 - 6891507
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 441  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| || |||||||||||    
T  6891611 tgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaagtatcgtatatatg 6891514  T
Q  442 cgataca 448  Q
    || ||||    
T  6891513 cggtaca 6891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 3406599 - 3406433
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||||||||||||  ||| |  | ||||||||| || || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  3406599 gaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 3406501  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||  ||||| |  |  ||||||| |||||||||||||||||||    
T  3406500 gataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3406433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 3440221 - 3440387
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||||||||||||  ||| |  | ||||||||| || || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  3440221 gaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 3440319  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||  ||||| |  |  ||||||| |||||||||||||||||||    
T  3440320 gataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3440387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 402
Target Start/End: Original strand, 17322606 - 17322641
Alignment:
Q  367 aaacgtattttatttaaaagaacaatgttctattta 402  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17322606 aaacgtattttttttaaaagaacaatgttctattta 17322641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 24988465 - 24988406
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaa 367  Q
    |||||||| ||||||| |||||||||||||||||| |||  ||| || ||||||||||||    
T  24988465 cgttcctatgaatttgaaggctcgactctgtaagtaaaactagacccataataaaataaa 24988406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 13913530 - 13913578
Alignment:
Q  433 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    ||||||||||| |||||| |||  ||||||| |||||||||||||||||    
T  13913530 gtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgag 13913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 306 - 525
Target Start/End: Complemental strand, 1534 - 1317
Alignment:
Q  306 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 405  Q
    ||||||||||||||| || ||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||     
T  1534 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaa- 1436  T
Q  406 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
          |||||||||||| || |||  |||||||||| |||||||||||| |||||||||||| |||||||||||||| ||| ||||||| || ||||||    
T  1435 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacgcttccaaaa 1336  T
Q  506 aacatccatctaacaccaaa 525  Q
    || || || |||||||||||    
T  1335 aa-attcacctaacaccaaa 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 304 - 525
Target Start/End: Original strand, 11242237 - 11242457
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||||||||||| ||||  ||||||||| |||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||| |    
T  11242237 gggtcgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattct-tttaaaagaacaatgttctattt-a 11242334  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-a 502  Q
    |       |||||||||||||||  ||  ||||||||| |||||| ||||| ||| |||||||||||||||||||||||| ||| ||||||||||||| |    
T  11242335 atttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctcccaa 11242434  T
Q  503 aaaaacatccatctaacaccaaa 525  Q
    ||||||| || ||||||||||||    
T  11242435 aaaaacacccctctaacaccaaa 11242457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 26718871 - 26719048
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||| ||||  |||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||       
T  26718871 cgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaa-at 26718969  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcc 486  Q
        ||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||    
T  26718970 ttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgaggatcc 26719048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 26988615 - 26988792
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||| ||||  |||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||       
T  26988615 cgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaa-at 26988713  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcc 486  Q
        ||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||    
T  26988714 ttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgaggatcc 26988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 334 - 522
Target Start/End: Original strand, 1366474 - 1366662
Alignment:
Q  334 tctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcg 433  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||       | |||||||||||||  ||| |    
T  1366474 tctgtaagtaaaaagaggtccgtaaaaaaataaaaacgtattttttttaaaagaacaatgttctatttaaatttttt-ataagataaatacaagatgtgg 1366572  T
Q  434 tatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacatccatctaacacc 522  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||||| ||||||||    
T  1366573 tatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctcataccaccctcccaaaaaaacatccacctaacacc 1366662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 345 - 507
Target Start/End: Original strand, 2024600 - 2024762
Alignment:
Q  345 aaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcg 443  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| ||||||||||||||| |||||||||| |    
T  2024600 aaagaggtccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttaaa-gataaatacaatgtgccgtatatatgtg 2024698  T
Q  444 atacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  2024699 atacacccaaagatgaaaatcactaccatatacatgaggatcctcaaaccatcctcccaaaaaa 2024762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 313 - 507
Target Start/End: Complemental strand, 34426076 - 34425883
Alignment:
Q  313 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 412  Q
    |||||||| || |||||||  |||||||||||||| |||   ||||||||||||||| |||| || ||||||||||||||||||||||| ||       |    
T  34426076 ctacgaatctgaaggctcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatcttttttaaaagaacaatgttctatttcaatttttt-a 34425978  T
Q  413 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||||||||||||| ||| |||||||||| |||||||| ||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  34425977 aaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaaaccaccctcccaaaaaa 34425883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 304 - 507
Target Start/End: Complemental strand, 2412266 - 2412068
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||| ||| ||||||||| ||||||  | |||||||||||||||||| ||||||||||||||| |     |||| ||| |||||||||||||||||||||    
T  2412266 gggttgtttctacgaattcggaggcaaggctctgtaagtgaaaagaggtccgtaataaaataatat----tttttttttaaagaacaatgttctatttaa 2412171  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       |||| |||||||||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| ||| ||||||||||||| |    
T  2412170 attttttaaaaa-ataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctcaaaccaccctcccta 2412072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 311 - 505
Target Start/End: Original strand, 2530823 - 2531015
Alignment:
Q  311 tcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnn 410  Q
    |||||||||| || ||| | | ||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||| ||||||||||||||           
T  2530823 tcctacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaa-aatgttctatttaa-gttttt 2530920  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
     ||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||| ||||||||||||| ||| ||||||||||| |||||    
T  2530921 taaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctctcaaaa 2531015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 374 - 525
Target Start/End: Original strand, 14318373 - 14318523
Alignment:
Q  374 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 473  Q
    |||| ||| ||||||||||||||||||||||       ||||||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||    
T  14318373 tttttttttaaagaacaatgttctatttaaatttttt-aaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgta 14318471  T
Q  474 tacatgaggatccttaaaccaccctcccaaaaaacatccatctaacaccaaa 525  Q
    |||||||||| ||| |||||||||||| |||||||| ||| |||| ||||||    
T  14318472 tacatgaggaacctcaaaccaccctccaaaaaaacacccacctaagaccaaa 14318523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 525
Target Start/End: Complemental strand, 10407643 - 10407422
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    ||||||||||||||||| | |||| |||  ||| ||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10407643 gggtcgttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctatttaa 10407544  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-a 502  Q
    |       |||||||||| |||| |||||||| |||||   |||| | |||  ||||||| |||||||||| ||||||||  ||  ||||||| |||| |    
T  10407543 a-ttttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctccaaccaccatcccaa 10407445  T
Q  503 aaaaacatccatctaacaccaaa 525  Q
    |||||||| ||||||||||||||    
T  10407444 aaaaacattcatctaacaccaaa 10407422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 374 - 525
Target Start/End: Original strand, 36868864 - 36869015
Alignment:
Q  374 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 473  Q
    |||| |||||||||||||||||||||||||        ||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||    
T  36868864 ttttttttaaaagaacaatgttctatttaa-tttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgta 36868962  T
Q  474 tacatgaggatccttaaaccaccct-cccaaaaaacatccatctaacaccaaa 525  Q
    ||||||||||  || |||||||||| ||||||||||||||| |||| ||||||    
T  36868963 tacatgaggaatctcaaaccaccctccccaaaaaacatccacctaataccaaa 36869015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 309 - 525
Target Start/End: Original strand, 40794249 - 40794464
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||| |||||||| ||||||||| ||||||||||||||||||   |||||||||||||||||| | |||| ||||||||||||||||| ||||||||       
T  40794249 gttcatacgaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaa-tt 40794347  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||| |||||||| | | |||| ||||  |||||||| |||  ||||||||||||||||||||||||| | ||| ||||||||||   ||||||    
T  40794348 ttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccct-aaaaaaaa 40794446  T
Q  508 catccatctaacaccaaa 525  Q
    |||| | |||||||||||    
T  40794447 catcaacctaacaccaaa 40794464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 338 - 509
Target Start/End: Complemental strand, 10543820 - 10543652
Alignment:
Q  338 taagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtata 437  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||| | |||||       |||||||||||| || |||  |||||    
T  10543820 taagtgaaaagagatccgtaataaaataaaaatgtattttttttaaa-gaataatgttccacttaaatttttt-aaaagataaatataaggtgatgtata 10543723  T
Q  438 tatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaaca 509  Q
    ||||||||||| |||||  |||||||||||||||||||||| ||||  || |||||||||||||||||||||    
T  10543722 tatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaaaccaccctcccaaaaaaca 10543652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 24395916 - 24395706
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  |||||  || |||||||| | |||||| | ||||||||||||||||| ||||||| ||||||| || |||||||||||||||       
T  24395916 cgttcctacgaatccggaggtacggctctgtaaataaaaagaaacccgtaataaaataaaaatgtattttttttaaaa-aataatgttctatttaaattt 24395818  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc--ccaaaa 505  Q
        ||||||||||||||| |||| |||||||| | ||||| |||||  |||||||||| |||||||| ||||||| | |||||||||||||    ||||    
T  24395817 ttt-aaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaaaccaccctctaaaaaaa 24395719  T
Q  506 aacatccatctaa 518  Q
    |||||||||||||    
T  24395718 aacatccatctaa 24395706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 481
Target Start/End: Original strand, 38869289 - 38869457
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  38869289 cctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt- 38869387  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  38869388 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 38869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 304 - 525
Target Start/End: Original strand, 22648656 - 22648874
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaa-taaaaacgtattttatttaaaagaacaatgttctattta 402  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||   | ||||||||| |||||| |||| || |||||  |||||||||||||||||    
T  22648656 gggtcgttcctacgaatccggagactcg-ctctgtaagtgaaaagaagcctgtaataaaaataaaaatgtatattttttaa--gaacaatgttctattta 22648752  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca 502  Q
    ||       |||||||||||||||||||||||||||||| |  ||| |||||  ||| ||||||||| ||||| || || | ||| |||||||| ||| |    
T  22648753 aatttttt-aaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctcaaaccaccttccaa 22648851  T
Q  503 aaaaacatccatctaacaccaaa 525  Q
    ||||||||||| |||||||||||    
T  22648852 aaaaacatccacctaacaccaaa 22648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 35080694 - 35080788
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    ||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||  |||||| ||||||||||||||||| ||||||||    
T  35080694 cgttcctacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa--tattttttttaaaagaacaatgttttatttaaa 35080788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 310 - 507
Target Start/End: Complemental strand, 33037958 - 33037760
Alignment:
Q  310 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattt--tatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||||||  |||||||| ||||||||  ||||||||   |||||||||||||||| |||| |  | ||||||||||||||||| ||||||||       
T  33037958 ttcctacgaattcagaggctcggctctgtaaccgaaaagaggctcgtaataaaataaaaatgtatatattttttaaaagaacaatgttttatttaaattt 33037859  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||||||||||||  | |||||||||||   ||||||||||  |||||| || ||||||||||||||||| ||| |||||||| ||| ||||||    
T  33037858 ttt-aaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctcaaaccaccatccaaaaaaa 33037760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 23284034 - 23284158
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga-taaatacaatgtgtcgtatatatgcgatacacccaaata 456  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |        ||||| ||||||||| |||||||||||||||| |||||||||| |    
T  23284034 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt--aaagactaaatacaaggtgtcgtatatatgcggtacacccaaaga 23284131  T
Q  457 tgaaaatcactaccgtatacatgagga 483  Q
    ||||||| |||||||||||||||||||    
T  23284132 tgaaaatgactaccgtatacatgagga 23284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 16198719 - 16198890
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  || || |||||||||||||| |          
T  16198719 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctatttatatttttt 16198818  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  16198819 -aaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgagga 16198890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 34756296 - 34756462
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  34756296 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 34756394  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  34756395 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 34756462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 16592005 - 16592170
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||||||||||||| |||||  | |||||||||  |  | ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||    
T  16592005 gaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatattttttttaaaagagcaatgttctatttatattttct-aaaag 16592103  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||  |||||||||||||||| |||||||| |  ||||||| ||||||||||| |||||||    
T  16592104 ataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgagga 16592170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 495
Target Start/End: Complemental strand, 15639817 - 15639635
Alignment:
Q  314 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna- 412  Q
    ||||||||||||||||||  ||| |||||||||| |   |||||||||| |||||| || |||| ||| |||||||||||||| |||||               
T  15639817 tacgaatttggaggctcggttctataagtgaaaataagcccgtaataaa-taaaaatgtttttttttttaaagaacaatgttcaatttattttttttttt 15639719  T
Q  413 -aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccac 495  Q
     |||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||  ||||||||| |||| |||||||||||    
T  15639718 taaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaaccac 15639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 31194544 - 31194706
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||||||| |||||  | |||||||||| | || ||||||| |||||||||||  ||||||||| |||||||||||||| |       ||||||    
T  31194544 aattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtatttcttttaaaagagcaatgttctatttata-ttttttaaaaga 31194642  T
Q  418 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    ||||||||| ||| |||||||||||| || ||||| |  ||||||| ||||||||||||||||||    
T  31194643 taaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 36187810 - 36187973
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||||||| |||| ||||||||| | |||||||||||| |       ||||     
T  36187810 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttttttttttaaaagagcgatgttctatttatatttttt-aaaat 36187908  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||    
T  36187909 ataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 36187973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 27079182 - 27079015
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  27079182 gaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 27079084  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| |||||| |||  ||||||| ||||| |||||||||||||    
T  27079083 agataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagga 27079015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 22986488 - 22986652
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||  |||||  | |||||||||  | || ||||||| |||||||| |||| ||||||||| |||||||||||| ||        ||||    
T  22986488 gaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctatt-aatattttttaaaa 22986586  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    || |||||||| |||||||||||||||| |||||||| |  ||||||| |||||||||||||||||    
T  22986587 gacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 22986652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 483
Target Start/End: Complemental strand, 30854498 - 30854333
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    |||||||||||||| |||||  | |||||| || || |  ||||||| |||||||||||| ||| |||||| |||||||||||||| |       |||||    
T  30854498 aatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttatatttttt-aaaag 30854400  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| ||| |||||||||||| ||||| || |  ||||||| |||| ||||||||||||||    
T  30854399 ataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagga 30854333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 9364366 - 9364295
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  9364366 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 9364295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 506
Target Start/End: Complemental strand, 17345135 - 17344937
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 406  Q
    |||||||||||||||||||| ||| |||| |||||| ||| |  |  |||||||||| |||| ||| |||| ||||||| ||||||||||||||||||      
T  17345135 cgttcctacgaatttggaggttcggctctctaagtggaaaaaagtatgtaataaaattaaaatgtatttttttttaaaataacaatgttctatttaaatt 17345036  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
          | | ||||||||||  |||| | |||||||| |||||||||| || ||||| |||||||||| ||  | || ||| |||||||| |||||||||    
T  17345035 ttttatata-ataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctcaaaccaccatcccaaaaa 17344937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 506
Target Start/End: Original strand, 41911642 - 41911736
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
    |||||| |||||||| |||||||||||| ||| ||||||||||  | |||||||||| |||||| ||||||| ||| ||| |||||| |||||||    
T  41911642 aaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctcaaatcacccttccaaaaa 41911736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 15480021 - 15480185
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||| |||||| |||||| || | |||||||||||| |       |||||    
T  15480021 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaa-gaccgatgttctatttatatttttt-aaaag 15480118  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||  ||||||||||||||| |||||||| |  ||||||| |||||||||| ||||||||    
T  15480119 ataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgagga 15480185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 28822367 - 28822435
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 480  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  28822367 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 19523274 - 19523203
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| ||||||||||||    
T  19523274 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagga 19523203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 606288 - 606236
Alignment:
Q  354 cgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaa 404  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  606288 cgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatttaaa 606236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 2275060 - 2274894
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| |||||||||  ||||  | |||||||||  | || ||||||| |||||||||||| ||| |||||| | |||||||||||| |       ||||    
T  2275060 gaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatatttttt-aaaa 2274962  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| || ||||||||||||  |||||||| |  ||||||| ||||||||||||| |||||    
T  2274961 gataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgagga 2274894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 27530672 - 27530611
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 369  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||  |||||||||||||||||    
T  27530672 cgttcctacgaatttagaggctcggttctataagtgaaaagaggcccgtaataaaataaaaa 27530611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 31881364 - 31881528
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| |||||||| |||||  | ||||||| | || |||||||||| ||||||| |||| |||  |||||| |||||||||||||| |       ||||    
T  31881364 aatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttctatttatatttttt-aaaa 31881462  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    ||||||||||  ||| ||||||||||||  ||| ||| | |||||||| ||||||||||||||||||    
T  31881463 gataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 22875112 - 22875060
Alignment:
Q  313 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaata 365  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||    
T  22875112 ctacgaatttggaggctcggttctgtaagtgaaaagagaacagtaataaaata 22875060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 16799352 - 16799423
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||| ||||||| || ||| |||||||||||| ||||||||||  ||||||| | |||||||||||||||||    
T  16799352 aaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgagga 16799423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 27924157 - 27924086
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| |||| |||||  | ||||| |||||||||||||||||||    
T  27924157 aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgagga 27924086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 40389561 - 40389632
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || |||||||||||||||| |||| |||||  ||||||| ||||||||||  |||||||    
T  40389561 aaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgagga 40389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 7670999 - 7670929
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    |||||||||||| || ||| ||||||| | || ||||||||||  ||||||| ||||||||||||||||||    
T  7670999 aaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 7338074 - 7338023
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaat 463  Q
    ||||||||||||||| |||||||||||||||| |||||| |||  |||||||    
T  7338074 aaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 32767269 - 32767213
Alignment:
Q  245 aaagtttaaatatgataacatatcttatgtatcacacacaagttgaatccatttcaa 301  Q
    |||||||||| ||||  |||||||| ||||||| || | ||||||||||||||||||    
T  32767269 aaagtttaaacatgaacacatatctcatgtatctcaaataagttgaatccatttcaa 32767213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 8e-50; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 307 - 525
Target Start/End: Complemental strand, 26279723 - 26279504
Alignment:
Q  307 tcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaann 406  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||      
T  26279723 tcgttcctatgaatttggaggttcaactttgtaagtgaaaagaggtccatagtaaaataaaaacgtatttt-tttaaaagaacaatgttctatttaaa-t 26279626  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcact--accgtatacatgaggatccttaaaccaccctccc-aa 503  Q
         |||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||  ||  |||||||||||| ||| ||||||||||||| ||    
T  26279625 tttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacctcaaaccaccctcccaaa 26279526  T
Q  504 aaaacatccatctaacaccaaa 525  Q
    |||||| ||| |||||||||||    
T  26279525 aaaacacccacctaacaccaaa 26279504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 322 - 525
Target Start/End: Complemental strand, 52374824 - 52374622
Alignment:
Q  322 tggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataa 420  Q
    |||| |||| ||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||         || ||||    
T  52374824 tggatgctcaactttgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaa-ataa 52374726  T
Q  421 atacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatccatctaaca 520  Q
    ||||||||||||||||| |||||||||| | |||   ||||||||||||||||||||||| || ||| | |||| |||||||||||||| ||| ||||||    
T  52374725 atacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctcatacca-cctcccaaaaaacacccacctaaca 52374627  T
Q  521 ccaaa 525  Q
    |||||    
T  52374626 ccaaa 52374622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 309 - 525
Target Start/End: Original strand, 28689287 - 28689502
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 408  Q
    ||||| || |||||||||| ||| ||||  ||||||||||||   ||||||||||||||||  |||||| ||||||| || |||||||||||||||        
T  28689287 gttcccacaaatttggaggttcggctctccaagtgaaaagaggctcgtaataaaataaaaagatattttttttaaaaaaagaatgttctatttaaatttt 28689386  T
Q  409 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaac 508  Q
       ||||||||||||||| ||| ||||||||||||||| | |||||  ||||||||||| ||||||||||||| |  || |||| |||||||||||||||    
T  28689387 ca-aaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaaactaccctcccaaaaaac 28689485  T
Q  509 atccatctaacaccaaa 525  Q
    | ||| |||||||||||    
T  28689486 acccacctaacaccaaa 28689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 8073272 - 8073437
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| ||||| || ||||||||| || || ||||||| |||||||||||| |||||||||  ||||||||||||| |       |||||    
T  8073272 gaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatttatatttttt-aaaag 8073370  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  8073371 ataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 8073437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 308 - 507
Target Start/End: Original strand, 54574748 - 54574950
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaatgttctatttaa 403  Q
    ||||||||||||| ||||||||||   ||| |||||||| |||| ||||||||||||||| | ||||||| |||    ||||||||||||||||||||||    
T  54574748 cgttcctacgaatctggaggctcggtgctggaagtgaaatgagacccgtaataaaataaagatgtattttttttttttaaaagaacaatgttctatttaa 54574847  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       |||| |||||||||| ||  |||||||||||| ||||||||||  | |||||||||||| |||||||||||| ||| ||||| |||||||||    
T  54574848 atttttc-aaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctcaaaccgccctcccaa 54574946  T
Q  504 aaaa 507  Q
    ||||    
T  54574947 aaaa 54574950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 308 - 507
Target Start/End: Complemental strand, 49393269 - 49393074
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  ||||||||| || |||||||||||| |||  |||||||||||||||| ||||||| ||| ||||||||||||||| ||||||       
T  49393269 cgttcctacgaatccggaggctcggct-tgtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctctttaaa-tt 49393172  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| | |||||||||||| | ||||||||||  | ||||| |||||||||||||||| || ||| ||| |||| ||||||||||    
T  49393171 ttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatga-gaacctcaaatcaccatcccaaaaaa 49393074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 507
Target Start/End: Complemental strand, 25855601 - 25855405
Alignment:
Q  309 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 408  Q
    |||||| || || ||||||||||  | ||||| |||||| ||  ||||||||||||||||| |||| || ||| ||||||||||||||||||||||        
T  25855601 gttcctgcgcatctggaggctcggttatgtaaatgaaaaaaggcccgtaataaaataaaaatgtatgtttttttaaagaacaatgttctatttaaatttt 25855502  T
Q  409 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
       ||||||||| ||||| ||||||||||||||   | ||||||||  ||||||||||||||||||||| || || ||| |||||||||||||||||||    
T  25855501 tt-aaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctcaaaccaccctcccaaaaaa 25855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 448
Target Start/End: Original strand, 23641242 - 23641382
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 406  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||  ||||||||| |      
T  23641242 cgttcctacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtatttttttttaaaagaacaacattctatttata-t 23641340  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgataca 448  Q
         |||||||||||||||||||||||||||||||| ||||    
T  23641341 tttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 36606136 - 36605973
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| ||||| ||| ||||| || ||||||||| || || ||||||| |||||||||||| ||||| ||| |||||||||||||| |       ||||||    
T  36606136 aattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttatattttttaaaaaga 36606037  T
Q  418 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    ||||||||| ||| |||||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  36606036 taaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 8420476 - 8420290
Alignment:
Q  341 gtgaaaagagatccgtaataaaataaaaacgtattt--tatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatat 438  Q
    ||||||||||| || |||||||||||||| ||||||  | |||||||||| |||||||||||||||       ||||||||||||||| ||| |||||||    
T  8420476 gtgaaaagagacccataataaaataaaaatgtatttcttttttaaaagaataatgttctatttaaatttttt-aaaagataaatacaaggtgccgtatat 8420378  T
Q  439 atgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc-ctcccaaaaaacatccatctaacaccaaa 525  Q
    |||   ||||||||||| ||||||||||| ||||||| | ||||| ||| ||||||||  ||| |||||||| ||| |||||||||||    
T  8420377 atgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctcaaaccaccattccaaaaaaacacccacctaacaccaaa 8420290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 43207167 - 43207336
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||||||||||||| |||||  | |||||||||  | || ||||| |||||||||||||| ||||||||| |||||||||||||| |           
T  43207167 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctatttata-tttttt 43207265  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||  ||||  ||||||| |||||||||||||||||||    
T  43207266 aaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgagga 43207336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 525
Target Start/End: Complemental strand, 29598179 - 29598072
Alignment:
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatccatct 516  Q
    |||||||||| ||  |||||||||| ||||||| |||| |||||| |||||||||||||||||||||  || |||||| ||||| |||||||||||| ||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaaccagcctccaaaaaaacatccacct 29598081  T
Q  517 aacaccaaa 525  Q
    |||||||||    
T  29598080 aacaccaaa 29598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 18372655 - 18372486
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||||| |||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  18372655 gaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 18372557  T
Q  417 ataaatacaatgtgtcgtatatat----gcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||| |||||||||||||    ||| ||||| || |  ||||||| |||||||||||||||||||    
T  18372556 ataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgagga 18372486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 34290569 - 34290735
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| |||||  | ||||||||  || || ||||||| |||||||||||| ||| |||| |||||||||||||||| |       ||||    
T  34290569 gaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatatttttt-aaaa 34290667  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||| || ||| |||||||||||| ||||||||||  ||||||| ||||||||||| |||||||    
T  34290668 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 34290735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 47467857 - 47467691
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta-aaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||||||| |||| |||  ||||| | |||||||||||| |       ||||    
T  47467857 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctatttatatttttt-aaaa 47467759  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| ||||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  47467758 gataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgagga 47467691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 333 - 483
Target Start/End: Original strand, 3953846 - 3953995
Alignment:
Q  333 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 432  Q
    ||||| || |||||||||  | || ||||||| |||| ||||||| |||||||||||||||||||||||| |       ||||||||||||||| ||| |    
T  3953846 ctctggaaatgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctatttatatttttt-aaaagataaatacaaggtgcc 3953944  T
Q  433 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| |||||||| |  ||||||| |  ||||||||||||||||    
T  3953945 gtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgagga 3953995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 21582945 - 21582778
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||||| || ||  | |||||||||  | || ||||||| |||||||||||| |||  |||||||||||||| |||||| |       |||    
T  21582945 gaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttatttatatttttt-aaa 21582847  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  21582846 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 21582778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 482
Target Start/End: Original strand, 36715957 - 36716123
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||||||||| ||  |||||||||||||| |||||||||||||| |       |||    
T  36715957 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctatttata-ttttttaaa 36716055  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||  || ||||||||| |||||    
T  36716056 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 37168545 - 37168374
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||| |||| |||||||||||||||| |          
T  37168545 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatatttttt 37168446  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || ||| |||||||||| | || |||||||  ||||||| |||||||||||||||||||    
T  37168445 -aaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagga 37168374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 38681026 - 38681192
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  38681026 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 38681124  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| ||||| |||||| |||| ||| |  ||||||| |||||||||||||||||||    
T  38681125 gataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgagga 38681192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 44708654 - 44708484
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| |||||||| ||||||  | |||||||||  | || ||||||| |||||||||||| || |||| |  ||||||||||||| |           
T  44708654 cctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagaaatgttctatttatatttttt- 44708556  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| ||||||||| || ||||||||||  ||||||| |||||||||||||||||||    
T  44708555 aaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgagga 44708484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 54619136 - 54619302
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || ||||||||   |  | ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  54619136 gaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 54619234  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  54619235 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 54619302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 505
Target Start/End: Original strand, 32319082 - 32319276
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||| | ||| |||||||||   |||||||||||||| || || ||||||||||||||| |||  || ||  |||||| |||||||||||||||       
T  32319082 cgttcctgcaaatatggaggctcagttctgtaagtgaaaataggtctgtaataaaataaaaatgtaagttttt--aaagaataatgttctatttaaattt 32319179  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaa 505  Q
        ||||||||||||||| |||| ||||||||||| ||||||||||  ||||||| |||| | |||| | ||||| ||| |||| || |||| ||||    
T  32319180 ttt-aaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctcaaactactctccaaaaa 32319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 525
Target Start/End: Complemental strand, 42453590 - 42453376
Alignment:
Q  305 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa-cgtattttattt--aaaagaacaatgttctattt 401  Q
    ||||||||||||||||  | || |||||||||||||||||||| |  |  ||||| ||||||||| | |||||| |||  ||||||||||||||| ||||    
T  42453590 ggtcgttcctacgaatgagaag-ctcgactctgtaagtgaaaaaatgtttgtaatgaaataaaaaacatattttttttttaaaagaacaatgttcaattt 42453492  T
Q  402 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc 501  Q
    |||       ||||||||||||||| ||||| ||||||||||||||||| |||  |||       || |||||||||||||| ||| ||||||||||       
T  42453491 aaatttttt-aaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccaccctaaa 42453400  T
Q  502 aaaaaacatccatctaacaccaaa 525  Q
    ||||| |||| |||||||||||||    
T  42453399 aaaaaccatctatctaacaccaaa 42453376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 27078501 - 27078666
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||| | ||||| || ||||||||| || || ||||||| ||||| ||  |||| ||||||| | |||||||||||||| |       |||    
T  27078501 gaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatttatatttttt-aaa 27078599  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||||||||||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||||    
T  27078600 agataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 27084298 - 27084463
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||| | ||||| || ||||||||| || || ||||||| ||||| ||  |||| ||||||| | |||||||||||||| |       |||    
T  27084298 gaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatttatatttttt-aaa 27084396  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||||||||||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||||    
T  27084397 agataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 53149272 - 53149413
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatat 440  Q
    |||||||||| | || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||||||||||||| ||| |||||||||    
T  53149272 tgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatat 53149370  T
Q  441 gcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||| ||||| || | || ||||| |||||||||||||||||||    
T  53149371 gcggtacactcagagataaaaatgactaccgtatacatgagga 53149413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 9878646 - 9878786
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 441  Q
    ||||||||| || || |||||||  ||||||||||| ||||||||| |||| ||||||||| |       |||||||||||| || |||  |||||||||    
T  9878646 tgaaaagaggtcagtgataaaatctaaacgtattttttttaaaagagcaatattctatttatatttttt-aaaagataaatataaggtgcagtatatatg 9878744  T
Q  442 cgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    || ||||||||||  ||||||| |||| ||||||||| ||||    
T  9878745 cggtacacccaaaggtgaaaatgactatcgtatacataagga 9878786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 451
Target Start/End: Original strand, 50258548 - 50258690
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||  ||||| ||||||||| |||||  |  ||||||||||| || ||||||| ||||| |||||| || |||||| | |||||||||||| |       
T  50258548 cgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatatttttttaaaaagagcgatgttctatttatattt 50258647  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacaccc 451  Q
        |||| |||||||||| |||||||||||||||| |||||||    
T  50258648 tttaaaaa-ataaatacaaggtgtcgtatatatgcggtacaccc 50258690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 53506912 - 53506981
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    |||||||||||| || ||  |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  53506912 aaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 53506981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 42098879 - 42098808
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||||| || || || |  ||||||| |||||||||||||||||||    
T  42098879 aaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgagga 42098808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 478
Target Start/End: Original strand, 54407083 - 54407252
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaatgttctatttaaannn 407  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||||| |||| |||    |||| |||||||||||||||| |       
T  54407083 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttctatttatattt 54407182  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacat 478  Q
        |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| ||||||||||||||    
T  54407183 ttt-aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 790009 - 789919
Alignment:
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||||||||| ||||| ||||||||   ||||||||||  | |||||||| ||| |||||||||||| ||| ||||||||  |||||||||    
T  790009 ataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctcaaaccaccaacccaaaaaa 789919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 398
Target Start/End: Original strand, 48720439 - 48720525
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttcta 398  Q
    |||| ||||| ||||||||| |||||  | ||||||||| |  || ||||||| |||||||||||| ||||||||| ||||||||||    
T  48720439 cctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacgtattttttttaaaagagcaatgttcta 48720525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 52973495 - 52973437
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataa 366  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||  || |||||||||||    
T  52973495 cgttcctacgaatttagaggctcgattctgtaagagaaaagaggcccataataaaataa 52973437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 50939162 - 50939332
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| || |||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| | ||||| |||||||| |           
T  50939162 cctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgatctatttatatttttt- 50939260  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||  | ||||||||||  | ||||| |||||||||||||||||||    
T  50939261 aaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgagga 50939332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 29598219 - 29598175
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaa 362  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||    
T  29598219 aattcggaggctcgactttgtaagtgaaaagaggtccgtaataaa 29598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 483
Target Start/End: Original strand, 29620423 - 29620487
Alignment:
Q  419 aaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||| ||| |||||||||||| || | ||| |  ||||||| |||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgagga 29620487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 52973435 - 52973379
Alignment:
Q  451 caaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||| |||||||||||||| |||| ||||| || | | |||||||||||||||||||    
T  52973435 caaagatgaaaatcactactgtatgcatgatgaacttcaaaccaccctcccaaaaaa 52973379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 324 - 507
Target Start/End: Original strand, 199 - 381
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaata 423  Q
    |||||||| ||||| ||||||| ||||  || |||||||||||||| |||||||  |||||||||||||||||||||||||       ||||||||||||    
T  199 gaggctcggctctgcaagtgaatagaggcccataataaaataaaaatgtatttttattaaaagaacaatgttctatttaaatttttt-aaaagataaata 297  T
Q  424 caatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  298 caaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaaaccaccctcccaaaaaa 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 521
Target Start/End: Original strand, 2477510 - 2477722
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||| |||||||||||||| |  ||||||| |||||| ||||||||||| |||||||       
T  2477510 cgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttt-tttaaacgaacaatgttcaatttaaattt 2477608  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccca-aaaa 506  Q
        ||||||||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  2477609 ttt-aaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccagaaaa 2477707  T
Q  507 acatccatctaacac 521  Q
    ||| ||| |||||||    
T  2477708 acacccacctaacac 2477722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 304 - 507
Target Start/End: Complemental strand, 20611973 - 20611773
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||  || ||| ||||||||||||| |||| || || | ||  |||||||| ||||    
T  20611973 gggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttcaagataa--atgttctacttaa 20611876  T
Q  404 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaa 503  Q
    |       ||| ||||||||||| ||||||||||||| ||| ||| |||||  ||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  20611875 atttttt-aaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaactaccctcccaa 20611777  T
Q  504 aaaa 507  Q
    ||||    
T  20611776 aaaa 20611773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 480
Target Start/End: Complemental strand, 17354132 - 17353964
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 410  Q
    |||| ||||| ||||||||||||||   | ||||||||| || || ||||||| |||||||||||| ||||||| || |||||||||||||| |          
T  17354132 cctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctatttatatttttt 17354033  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 480  Q
     |||||||||||| || |||||||||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  17354032 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 33774291 - 33774124
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||| ||||||||| ||||| || |||||||||  | |||||||||| ||||| ||  |||| |||||||||  ||||||||||||| |       |||    
T  33774291 gaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatttatatttttt-aaa 33774193  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  33774192 agataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgagga 33774124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 21183703 - 21183813
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc-aaaaaacat 510  Q
    ||||||||||||||| ||  |||||||||| | ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||    
T  21183703 aaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaaccacccacccaaaaaaacat 21183802  T
Q  511 ccatctaacac 521  Q
    ||| |||||||    
T  21183803 ccacctaacac 21183813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 21479668 - 21479501
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 414  Q
    ||||||||||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| ||||||||| |||||||||||||| |       |||    
T  21479668 gaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatatttttt-aaa 21479570  T
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  21479569 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 21479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 506
Target Start/End: Complemental strand, 6159568 - 6159422
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||||||||| |||||| |||||  ||||||||||||||||| |       |||||||||||||||||||||||||||||||| ||||  ||||  |    
T  6159568 ataaaataaaaacatattttttttaat-gaacaatgttctatttatatttttt-aaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggt 6159471  T
Q  458 gaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaa 506  Q
    | |||||||||||||||| || |||| ||| |||||||||| |||||||    
T  6159470 ggaaatcactaccgtatatataaggaacctcaaaccacccttccaaaaa 6159422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 13727332 - 13727498
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  13727332 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 13727430  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13727431 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13727498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 20711653 - 20711819
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| |||||||||  ||||  | ||||||||| || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |       ||||    
T  20711653 gaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttt-aaaa 20711751  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  20711752 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20711819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 312 - 483
Target Start/End: Original strand, 27788618 - 27788787
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 411  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||| ||||||||| |           
T  27788618 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttt-tttaaaagagcaattttctatttatatttttt- 27788715  T
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  27788716 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 27788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 27314113 - 27314244
Alignment:
Q  318 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 417  Q
    |||| |||||||||||||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  27314113 aattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaaaga 27314212  T
Q  418 taaatacaatgtgtcgtatatatgcgatacac 449  Q
    ||||||||| ||| |||||||||||| |||||    
T  27314213 taaatacaaggtgccgtatatatgcggtacac 27314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 21280718 - 21280552
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 415  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  21280718 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 21280620  T
Q  416 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  21280619 gataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 21280552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 483
Target Start/End: Complemental strand, 28075965 - 28075790
Alignment:
Q  311 tcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta----aaagaacaatgttctatttaaann 406  Q
    ||||| ||||||||||||||| |||||  | |||||||||  | || | ||||| |||||||||||| ||||    ||| | |||||||||||||| |      
T  28075965 tcctaagaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatt 28075866  T
Q  407 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
         |||||||||||| || ||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  28075865 tttt-aaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgagga 28075790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 469
Target Start/End: Complemental strand, 30121941 - 30121783
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||| ||||||| |||||| | | |||| |||||||||| ||   |||||||||||||||  || |||| ||| ||||||||||||| ||||||||       
T  30121941 cgttcatacgaatatggaggttgggctctataagtgaaaataggctcgtaataaaataaaa--gtgtttttttttaaagaacaatgttttatttaaattt 30121844  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactac 469  Q
        |||| |||||||||| ||||| ||||||||||||||| |||||  |||||||||||||    
T  30121843 tttaaaaa-ataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 34397988 - 34397864
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||| |||  |    
T  34397988 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggt 34397890  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
     ||||| |||| |||| |||||||||    
T  34397889 aaaaatgactatcgtaaacatgagga 34397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 19737667 - 19737791
Alignment:
Q  358 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 457  Q
    ||||||| |||| || |||| ||||||||| |||||||||||||| |       ||| ||||||||||| ||| |||||||||||| |||||| | |  |    
T  19737667 ataaaatcaaaatgttttttttttaaaagagcaatgttctatttatatttttttaaa-gataaatacaaggtgccgtatatatgcggtacacctagaggt 19737765  T
Q  458 gaaaatcactaccgtatacatgagga 483  Q
    |||||| |||||||||||||||||||    
T  19737766 gaaaatgactaccgtatacatgagga 19737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 1155877 - 1155947
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 482  Q
    ||||||||||||||| ||||| |||||||||| |||| ||| |  ||||||| ||||||||||||||||||    
T  1155877 aaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 27131120 - 27131189
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta 373  Q
    |||||||||| ||||||   ||||||| ||||| ||| |||||||||||| |||||||||||||||||||    
T  27131120 gggtcgttccaacgaatccagaggctcaactctataaatgaaaagagatctgtaataaaataaaaacgta 27131189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 507
Target Start/End: Complemental strand, 4037023 - 4036931
Alignment:
Q  415 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    |||||||||||| ||| |||||||||  | ||||||||||  | || |||||||||||||| ||||||| | | |||||||||||| ||||||    
T  4037023 agataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccctccaaaaaaa 4036931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 24711027 - 24711098
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||||||| ||| |||||||||| | ||||| || |  ||||||| |||||||||||||||||||    
T  24711027 aaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgagga 24711098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 27994936 - 27994850
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgtt 395  Q
    |||||||||||||  ||| ||||| ||||||||| ||||| |    |||||||||||||||||||||||| ||||| |||||||||||    
T  27994936 cgttcctacgaatccggaagctcggctctgtaagcgaaaataagctcgtaataaaataaaaacgtatttt-tttaagagaacaatgtt 27994850  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 481
Target Start/End: Original strand, 235183 - 235323
Alignment:
Q  342 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcg--tatata 439  Q
    |||||||||| | || ||||||| |||||||||||| ||| ||| | ||||| |||||||| |       |||||||||||| || ||| ||  ||||||    
T  235183 tgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaaagcaatgatctatttatatttttt-aaaagataaatataaggtgccgggtatata 235281  T
Q  440 tgcgatacacccaaatatgaaaatcactaccgtatacatgag 481  Q
    | |  |||||||||| |||||||| |||||||||||||||||    
T  235282 taccgtacacccaaagatgaaaatgactaccgtatacatgag 235323  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 4037604 - 4037524
Alignment:
Q  322 tggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 403  Q
    |||||||| | ||| |||||||| |||||  || | |||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  4037604 tggaggctaggctccgtaagtgataagagggccatgataaaataaaaatgtatttt-ttttaaagaataatgttctatttaa 4037524  T

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Target: scaffold0097 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 306 - 498
Target Start/End: Complemental strand, 39108 - 38914
Alignment:
Q  306 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaa---aagaacaatgttctattta 402  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||| |||     || ||||||||||||||||    
T  39108 gtcgttcctacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaacgtttttttttttttttaaaaacaatgttctattta 39009  T
Q  403 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 498  Q
    ||       ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  39008 aatttttt-aaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctcaaaccaccct 38914  T

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Target: scaffold0012 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 333 - 492
Target Start/End: Original strand, 206439 - 206597
Alignment:
Q  333 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 432  Q
    |||||||||||||||||| |  ||||||||||||||| ||||||| ||| |||||| |||||||||||||||       ||||||||||||||| |||||    
T  206439 ctctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaagaagaatgttctatttaaattttgt-aaaagataaatacaaggtgtc 206537  T
Q  433 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaac 492  Q
    ||||||||||| |||||||||   ||||||||||||||||||||||||||| ||| ||||    
T  206538 gtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaaac 206597  T

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Target: scaffold0007 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 525
Target Start/End: Original strand, 230786 - 231001
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||||||||||  ||| |||||  |||||||| ||||||||  |||||||||||  |||| |||| || ||||||||||||||||||||||||||       
T  230786 cgttcctacgaatccggaagctcggatctgtaagggaaaagaggcccgtaataaaa--aaaatgtatattttttaaaagaacaatgttctatttaaattt 230883  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        |||||||||||  || |||| |||||||||||||| |||||||  |||||||||||||| |||||||||||| | | |||||||||||||||||||    
T  230884 gtt-aaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaaaccaccctcccaaaaaa 230982  T
Q  508 -catccatctaacaccaaa 525  Q
     || ||| |||||||||||    
T  230983 ccacccacctaacaccaaa 231001  T

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Target: scaffold0182 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 521
Target Start/End: Original strand, 23925 - 24130
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    ||||||||||||||||||||||||  ||| |||||||||||||   | |||||||| | |||   |||||     |||||||||| |||||||||||       
T  23925 cgttcctacgaatttggaggctcggttctctaagtgaaaagaggctcataataaaaaataaa---attttt----aaagaacaatattctatttaaattt 24017  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| |||||||||||||||| ||||||||||  ||||||||| |||||||| ||| ||||  || |||||||||||||||||||    
T  24018 ttt-aaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctcaaaccaccctcccaaaaaa 24116  T
Q  508 catccatctaacac 521  Q
    |||||| |||||||    
T  24117 catccacctaacac 24130  T

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Target: scaffold0039 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 106713 - 106542
Alignment:
Q  312 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 410  Q
    |||| ||||||||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||| ||||||||||||||||||||| |          
T  106713 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatttatatttttt 106614  T
Q  411 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
     |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  106613 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 1512 - 1347
Alignment:
Q  317 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 416  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| || ||||||||||| |       |||||    
T  1512 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctatttatatttttt-aaaag 1414  T
Q  417 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 483  Q
    ||||||||||  || |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  1413 ataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 507
Target Start/End: Complemental strand, 40270 - 40065
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 402  Q
    |||||| ||||  |||| |||||| ||  |||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  40270 gggtcgatcctgtgaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctattta 40171  T
Q  403 a-annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc 501  Q
    |         ||||||||||||||| ||| ||||| ||||   ||||||| ||  |||||||||| | |||||||||||| | ||| |||||||| ||||    
T  40170 atttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 40071  T
Q  502 aaaaaa 507  Q
    ||||||    
T  40070 aaaaaa 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 507
Target Start/End: Complemental strand, 138330 - 138125
Alignment:
Q  304 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 402  Q
    |||||| ||||  |||| |||||| ||  |||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  138330 gggtcgatcctgtgaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctattta 138231  T
Q  403 a-annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccc 501  Q
    |         ||||||||||||||| ||| ||||| ||||   ||||||| ||  |||||||||| | |||||||||||| | ||| |||||||| ||||    
T  138230 atttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 138131  T
Q  502 aaaaaa 507  Q
    ||||||    
T  138130 aaaaaa 138125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 521
Target Start/End: Original strand, 351260 - 351471
Alignment:
Q  308 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 407  Q
    |||||| || ||| |||||||||  ||||||| ||||||| |   ||||||||||||||||| || |||| ||  || || ||||||||||||||||       
T  351260 cgttccgacaaatctggaggctcagctctgtatgtgaaaaaatgcccgtaataaaataaaaatgttttttttt--aatgatcaatgttctatttaaaaaa 351357  T
Q  408 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
        ||||||||||||||| ||||||||||||||   ||||||||||  |||||||| |||| | ||||| ||||  ||| |||||||  |||| |||||    
T  351358 aattaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaaccacaatcccgaaaaa 351457  T
Q  508 catccatctaacac 521  Q
    |||||| |||||||    
T  351458 catccacctaacac 351471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 525
Target Start/End: Original strand, 350281 - 350349
Alignment:
Q  457 tgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaacatccatctaacaccaaa 525  Q
    |||||||| |||| | ||||||||||  ||| |||||||  |||||||||||||||| |||||||||||    
T  350281 tgaaaatcgctactgaatacatgaggtacctcaaaccacaatcccaaaaaacatccacctaacaccaaa 350349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 412 - 507
Target Start/End: Original strand, 173538 - 173633
Alignment:
Q  412 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcccaaaaaa 507  Q
    ||||||||||||||| ||  |||||||||||||||||||||||  | |||||||||||||||||| |||||| ||| |||||| ||||||| ||||    
T  173538 aaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaaaccatcctcccataaaa 173633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 4404 - 4484
Alignment:
Q  324 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    |||||||| ||||| ||||||| ||||  ||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  4404 gaggctcggctctgcaagtgaatagaggcccgtaataaaataaaaatgtatttttattaaaagaacaatgttctatttaaa 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 323 - 404
Target Start/End: Complemental strand, 16228 - 16147
Alignment:
Q  323 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 404  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||||||||||  ||| |||||  |||||||||||||||    
T  16228 ggaggctcgactctgtaagtgaaaaaaattctgtaataaaataaaaacgtatttctttttaaagagaaatgttctatttaaa 16147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 498
Target Start/End: Complemental strand, 16095 - 16016
Alignment:
Q  419 aaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 498  Q
    ||||||||  |||||||| |||||| |||| ||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccaccct 16016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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