View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9090_low_56 (Length: 338)
Name: NF9090_low_56
Description: NF9090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9090_low_56 |
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Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 39986872 - 39987178
Alignment:
| Q |
19 |
acccaacagaagagttgagcaatgttattaatgtgaagtattcatgatggaccgaaataatttaatataaacaaaaagacacctaagtattcaaaggatc |
118 |
Q |
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| T |
39986872 |
acccaactgaagagttgagcaatgttattaatgtgaagtattcatgatggaccgaaataatttaatataaacaaaaagacacctgagcattcaaagggtc |
39986971 |
T |
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| Q |
119 |
aaccaattatagatgacattatgattgttaaaaagaatatttccaaaattgataagcagttcagccttgggcttcttagttactcaagataaagttggaa |
218 |
Q |
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| T |
39986972 |
aatcaattatagatgacattatgattgttaaaaagaatatttccaaaattgataagcagttcagccttgggcttcttagttactcaagataaagttggaa |
39987071 |
T |
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| Q |
219 |
caaaactttcttttgtggaaaggttgatagaagtttaaaatagtagcgttcttgcaccatccttcaagttgagtgagaaacaaattcccagaacagatga |
318 |
Q |
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| T |
39987072 |
caaaactttcttttgtggaaaggttgatagaagtttaaaatagtagcgttcttgcaccatccttcaagttgagtgagaaacaaattcccagaacagatga |
39987171 |
T |
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| Q |
319 |
agagaat |
325 |
Q |
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||||||| |
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| T |
39987172 |
agagaat |
39987178 |
T |
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