View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9090_low_60 (Length: 314)

Name: NF9090_low_60
Description: NF9090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9090_low_60
NF9090_low_60
[»] chr7 (47 HSPs)
chr7 (29-222)||(32178617-32178808)
chr7 (239-298)||(46246575-46246634)
chr7 (239-298)||(12178483-12178542)
chr7 (239-298)||(46245122-46245181)
chr7 (239-296)||(706743-706800)
chr7 (239-296)||(11669841-11669898)
chr7 (239-296)||(27161997-27162054)
chr7 (239-298)||(12180639-12180698)
chr7 (239-298)||(13420286-13420345)
chr7 (239-298)||(37133649-37133708)
chr7 (239-298)||(38758317-38758376)
chr7 (239-298)||(45277967-45278026)
chr7 (239-296)||(708154-708211)
chr7 (239-296)||(41591515-41591572)
chr7 (242-298)||(40028460-40028516)
chr7 (239-298)||(8230070-8230129)
chr7 (239-298)||(21715072-21715131)
chr7 (239-298)||(21716619-21716678)
chr7 (239-298)||(31392058-31392117)
chr7 (239-298)||(31393659-31393718)
chr7 (239-298)||(37348735-37348794)
chr7 (239-298)||(38756655-38756714)
chr7 (239-296)||(27160305-27160362)
chr7 (239-296)||(32429872-32429929)
chr7 (239-296)||(41385811-41385868)
chr7 (239-296)||(41593205-41593262)
chr7 (242-298)||(11671286-11671342)
chr7 (242-286)||(37350216-37350260)
chr7 (239-298)||(3704398-3704457)
chr7 (239-298)||(20208464-20208523)
chr7 (239-298)||(25008092-25008151)
chr7 (239-298)||(28848558-28848617)
chr7 (240-298)||(8231634-8231692)
chr7 (240-298)||(37131836-37131894)
chr7 (239-297)||(40030030-40030088)
chr7 (239-281)||(43546747-43546789)
chr7 (241-298)||(14774515-14774572)
chr7 (241-298)||(15224968-15225025)
chr7 (239-296)||(28556246-28556303)
chr7 (239-296)||(37547934-37547991)
chr7 (239-296)||(41384149-41384206)
chr7 (239-291)||(15136946-15136998)
chr7 (241-289)||(39787760-39787808)
chr7 (239-298)||(25009485-25009544)
chr7 (239-286)||(31734766-31734813)
chr7 (14-45)||(32178807-32178838)
chr7 (109-144)||(32279710-32279745)
[»] chr3 (37 HSPs)
chr3 (239-298)||(41081802-41081861)
chr3 (239-298)||(31796834-31796893)
chr3 (239-298)||(40499252-40499311)
chr3 (239-296)||(32558919-32558976)
chr3 (239-298)||(31795373-31795432)
chr3 (239-298)||(41083271-41083330)
chr3 (239-298)||(48566996-48567055)
chr3 (239-297)||(48568531-48568589)
chr3 (239-296)||(32613883-32613941)
chr3 (242-296)||(32615648-32615702)
chr3 (241-296)||(24613614-24613669)
chr3 (239-297)||(3150020-3150078)
chr3 (240-290)||(24612279-24612329)
chr3 (242-296)||(33781496-33781550)
chr3 (239-296)||(31199249-31199306)
chr3 (239-296)||(32559885-32559942)
chr3 (239-296)||(33780657-33780714)
chr3 (242-297)||(22942339-22942394)
chr3 (239-297)||(33732965-33733023)
chr3 (239-296)||(3026883-3026940)
chr3 (242-298)||(30700299-30700355)
chr3 (239-298)||(53527970-53528029)
chr3 (239-298)||(53529534-53529593)
chr3 (239-281)||(8391401-8391443)
chr3 (239-293)||(25529922-25529976)
chr3 (239-296)||(44458595-44458652)
chr3 (242-298)||(33734502-33734558)
chr3 (242-298)||(41879927-41879983)
chr3 (242-298)||(46725269-46725325)
chr3 (240-291)||(27320703-27320754)
chr3 (242-297)||(31656956-31657011)
chr3 (239-298)||(55196574-55196633)
chr3 (239-293)||(33551588-33551641)
chr3 (239-281)||(45981407-45981449)
chr3 (239-296)||(5377807-5377864)
chr3 (242-298)||(3149265-3149321)
chr3 (239-291)||(30701847-30701899)
[»] chr2 (47 HSPs)
chr2 (239-298)||(40304762-40304821)
chr2 (239-298)||(40303293-40303352)
chr2 (239-298)||(45493032-45493091)
chr2 (239-298)||(45499305-45499364)
chr2 (239-298)||(45500774-45500833)
chr2 (240-298)||(22060480-22060538)
chr2 (239-297)||(44097354-44097412)
chr2 (241-298)||(7317392-7317449)
chr2 (239-296)||(22054334-22054391)
chr2 (239-298)||(6844097-6844156)
chr2 (239-296)||(22060162-22060219)
chr2 (242-298)||(6842718-6842774)
chr2 (242-298)||(22053128-22053184)
chr2 (239-298)||(16143596-16143655)
chr2 (239-298)||(28165658-28165717)
chr2 (239-296)||(18224847-18224904)
chr2 (239-296)||(43516398-43516455)
chr2 (239-296)||(44820932-44820989)
chr2 (241-297)||(44465091-44465147)
chr2 (239-298)||(28563376-28563435)
chr2 (239-298)||(44492311-44492370)
chr2 (239-297)||(10343988-10344046)
chr2 (239-297)||(16142226-16142284)
chr2 (239-296)||(28563957-28564014)
chr2 (239-296)||(40128929-40128986)
chr2 (242-298)||(28167330-28167386)
chr2 (241-289)||(42928937-42928985)
chr2 (239-298)||(1841755-1841814)
chr2 (239-298)||(20587039-20587098)
chr2 (240-279)||(44095359-44095398)
chr2 (239-281)||(20588476-20588518)
chr2 (239-297)||(35588127-35588185)
chr2 (242-291)||(13947751-13947800)
chr2 (242-291)||(14088940-14088989)
chr2 (239-291)||(9262899-9262951)
chr2 (239-287)||(9660846-9660893)
chr2 (239-298)||(38730062-38730122)
chr2 (239-286)||(1840157-1840204)
chr2 (239-282)||(9662192-9662234)
chr2 (239-298)||(16288974-16289033)
chr2 (239-298)||(38728185-38728243)
chr2 (241-296)||(40127242-40127297)
chr2 (239-298)||(44421342-44421401)
chr2 (239-286)||(44906147-44906194)
chr2 (239-296)||(43518079-43518136)
chr2 (244-297)||(44904532-44904585)
chr2 (242-298)||(31557948-31558004)
[»] chr5 (29 HSPs)
chr5 (239-298)||(38624716-38624775)
chr5 (239-298)||(16308565-16308624)
chr5 (239-298)||(38626170-38626229)
chr5 (239-298)||(27756785-27756844)
chr5 (243-297)||(28592081-28592135)
chr5 (239-296)||(9672353-9672410)
chr5 (239-295)||(28592421-28592476)
chr5 (239-297)||(17555004-17555063)
chr5 (241-296)||(35931350-35931405)
chr5 (108-161)||(12036346-12036399)
chr5 (93-161)||(6102835-6102903)
chr5 (242-298)||(11771201-11771257)
chr5 (240-296)||(35929523-35929579)
chr5 (239-298)||(1418936-1418995)
chr5 (239-298)||(30332283-30332342)
chr5 (239-298)||(33489899-33489958)
chr5 (239-297)||(8874275-8874333)
chr5 (240-298)||(18201345-18201403)
chr5 (241-298)||(8872522-8872579)
chr5 (84-161)||(16802025-16802102)
chr5 (241-298)||(25916278-25916335)
chr5 (241-298)||(36619546-36619603)
chr5 (239-298)||(30334007-30334066)
chr5 (259-298)||(37498895-37498934)
chr5 (239-298)||(39103411-39103470)
chr5 (239-281)||(42775420-42775462)
chr5 (239-296)||(9670959-9671016)
chr5 (239-296)||(13373768-13373825)
chr5 (240-289)||(16310108-16310157)
[»] chr4 (50 HSPs)
chr4 (240-298)||(33609344-33609402)
chr4 (239-296)||(4906129-4906186)
chr4 (239-296)||(4931998-4932055)
chr4 (242-298)||(22309138-22309194)
chr4 (242-298)||(33607471-33607527)
chr4 (239-294)||(4907465-4907520)
chr4 (239-294)||(4933335-4933390)
chr4 (239-298)||(22307671-22307730)
chr4 (239-294)||(29756272-29756327)
chr4 (239-296)||(29757610-29757667)
chr4 (239-298)||(21354776-21354836)
chr4 (239-298)||(19994498-19994557)
chr4 (241-296)||(35786682-35786737)
chr4 (239-298)||(48713462-48713521)
chr4 (239-297)||(18597855-18597913)
chr4 (242-296)||(38157023-38157077)
chr4 (239-296)||(23703865-23703922)
chr4 (242-295)||(54534981-54535034)
chr4 (239-298)||(2671541-2671600)
chr4 (247-298)||(9561854-9561905)
chr4 (239-298)||(19996054-19996113)
chr4 (239-298)||(32082633-32082692)
chr4 (239-298)||(42889810-42889869)
chr4 (239-298)||(42977198-42977257)
chr4 (239-298)||(42978919-42978978)
chr4 (239-298)||(44251605-44251664)
chr4 (239-298)||(55948953-55949012)
chr4 (239-297)||(39654673-39654731)
chr4 (239-297)||(54123546-54123604)
chr4 (241-298)||(10337106-10337163)
chr4 (240-293)||(23702398-23702451)
chr4 (240-296)||(35785166-35785222)
chr4 (239-286)||(11148350-11148397)
chr4 (241-296)||(22674154-22674209)
chr4 (239-298)||(24919052-24919111)
chr4 (239-298)||(34538126-34538185)
chr4 (239-298)||(44253192-44253251)
chr4 (239-298)||(55947360-55947419)
chr4 (242-290)||(39665274-39665322)
chr4 (242-298)||(54536697-54536753)
chr4 (239-298)||(18597632-18597691)
chr4 (239-298)||(39929354-39929413)
chr4 (242-280)||(55017743-55017781)
chr4 (241-298)||(48711860-48711917)
chr4 (120-161)||(53142815-53142856)
chr4 (239-296)||(55019359-55019416)
chr4 (242-286)||(7851553-7851597)
chr4 (258-298)||(9563335-9563375)
chr4 (242-298)||(10338170-10338226)
chr4 (99-161)||(51100064-51100128)
[»] chr1 (60 HSPs)
chr1 (239-296)||(50315318-50315375)
chr1 (239-298)||(24437074-24437133)
chr1 (239-297)||(46604439-46604497)
chr1 (239-296)||(8323441-8323498)
chr1 (239-296)||(31815772-31815829)
chr1 (240-296)||(9626469-9626525)
chr1 (239-298)||(22684150-22684209)
chr1 (239-296)||(8322521-8322578)
chr1 (239-296)||(31809989-31810046)
chr1 (239-286)||(10708030-10708077)
chr1 (239-298)||(16673256-16673315)
chr1 (239-298)||(24438948-24439007)
chr1 (239-294)||(26734426-26734481)
chr1 (239-298)||(33259372-33259431)
chr1 (239-298)||(33279531-33279590)
chr1 (239-297)||(12095877-12095935)
chr1 (240-298)||(16592022-16592080)
chr1 (239-296)||(32847814-32847871)
chr1 (258-298)||(31321028-31321068)
chr1 (242-298)||(40767618-40767674)
chr1 (242-298)||(50317050-50317106)
chr1 (239-298)||(7184323-7184382)
chr1 (239-298)||(7655264-7655323)
chr1 (239-297)||(12097941-12097999)
chr1 (239-296)||(9627583-9627640)
chr1 (239-296)||(11431331-11431388)
chr1 (239-296)||(28251931-28251988)
chr1 (239-296)||(33753635-33753692)
chr1 (239-296)||(42301622-42301679)
chr1 (239-296)||(52793704-52793761)
chr1 (239-291)||(9419825-9419877)
chr1 (242-298)||(13211112-13211168)
chr1 (239-283)||(18604583-18604627)
chr1 (242-286)||(44268891-44268935)
chr1 (239-298)||(7653686-7653745)
chr1 (239-290)||(10612138-10612189)
chr1 (239-298)||(13222914-13222973)
chr1 (242-297)||(14095721-14095776)
chr1 (239-298)||(33257881-33257940)
chr1 (239-298)||(33278053-33278112)
chr1 (239-298)||(36145344-36145403)
chr1 (239-298)||(46652781-46652840)
chr1 (240-298)||(31027226-31027284)
chr1 (239-289)||(31028673-31028723)
chr1 (239-289)||(31035643-31035693)
chr1 (239-297)||(41668273-41668331)
chr1 (239-296)||(35383058-35383115)
chr1 (101-161)||(27513-27573)
chr1 (239-298)||(13229273-13229333)
chr1 (239-298)||(7185856-7185915)
chr1 (239-298)||(28919083-28919142)
chr1 (239-298)||(28920655-28920714)
chr1 (239-294)||(32849933-32849988)
chr1 (239-286)||(33981504-33981551)
chr1 (240-291)||(35381385-35381436)
chr1 (239-298)||(44269074-44269133)
chr1 (239-289)||(33755325-33755375)
chr1 (120-161)||(27160338-27160379)
chr1 (239-296)||(27524265-27524322)
chr1 (239-296)||(46605924-46605981)
[»] scaffold0280 (1 HSPs)
scaffold0280 (239-298)||(12131-12190)
[»] chr8 (30 HSPs)
chr8 (239-298)||(3158037-3158096)
chr8 (239-298)||(39884616-39884675)
chr8 (239-298)||(39886076-39886135)
chr8 (239-296)||(357977-358034)
chr8 (239-291)||(45448499-45448551)
chr8 (239-296)||(36899898-36899955)
chr8 (239-294)||(359318-359373)
chr8 (239-297)||(22714050-22714108)
chr8 (239-296)||(17706165-17706222)
chr8 (240-296)||(21142480-21142536)
chr8 (239-298)||(25264340-25264399)
chr8 (240-290)||(15279641-15279691)
chr8 (240-290)||(15460010-15460060)
chr8 (239-296)||(17707450-17707507)
chr8 (239-296)||(36901179-36901236)
chr8 (240-296)||(27339188-27339244)
chr8 (239-298)||(1650210-1650269)
chr8 (239-298)||(25265905-25265964)
chr8 (239-294)||(26720252-26720307)
chr8 (239-296)||(7272900-7272957)
chr8 (93-146)||(18131198-18131251)
chr8 (108-161)||(40607320-40607373)
chr8 (239-298)||(7274651-7274710)
chr8 (239-298)||(26719385-26719444)
chr8 (239-298)||(33295445-33295504)
chr8 (240-294)||(2552408-2552462)
chr8 (240-290)||(37963275-37963325)
chr8 (241-290)||(5461936-5461985)
chr8 (239-296)||(27411242-27411299)
chr8 (239-295)||(37964645-37964701)
[»] chr6 (23 HSPs)
chr6 (239-297)||(1443417-1443475)
chr6 (239-296)||(11065656-11065713)
chr6 (239-298)||(1258440-1258499)
chr6 (239-296)||(842186-842243)
chr6 (239-296)||(7796749-7796806)
chr6 (239-294)||(843524-843580)
chr6 (239-298)||(1256714-1256773)
chr6 (239-298)||(8745432-8745491)
chr6 (239-297)||(10707676-10707734)
chr6 (240-298)||(19084120-19084178)
chr6 (242-296)||(30321166-30321220)
chr6 (241-298)||(8752800-8752857)
chr6 (239-296)||(19402124-19402181)
chr6 (239-286)||(28048980-28049027)
chr6 (99-161)||(20208051-20208113)
chr6 (99-161)||(22102074-22102136)
chr6 (239-291)||(19597984-19598036)
chr6 (239-298)||(7678647-7678706)
chr6 (240-298)||(2956235-2956293)
chr6 (239-297)||(4496505-4496563)
chr6 (239-296)||(19596343-19596400)
chr6 (239-296)||(20773443-20773500)
chr6 (242-298)||(33469800-33469856)
[»] scaffold0129 (1 HSPs)
scaffold0129 (239-296)||(4259-4316)
[»] scaffold1118 (1 HSPs)
scaffold1118 (247-298)||(2420-2471)
[»] scaffold1176 (1 HSPs)
scaffold1176 (239-298)||(2051-2110)
[»] scaffold0060 (1 HSPs)
scaffold0060 (239-296)||(13253-13310)
[»] scaffold0633 (1 HSPs)
scaffold0633 (239-297)||(6895-6953)
[»] scaffold0524 (1 HSPs)
scaffold0524 (242-298)||(7701-7757)
[»] scaffold0489 (1 HSPs)
scaffold0489 (239-298)||(6815-6874)
[»] scaffold0018 (1 HSPs)
scaffold0018 (239-298)||(193591-193650)
[»] scaffold0299 (1 HSPs)
scaffold0299 (59-161)||(18054-18158)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 32178808 - 32178617
Alignment:
Q  29 agatatagtattgctagcattactctgtgtagaatgctaaagagtaccttcaaaatattgggtgagcagccaaaacatgtaactttttgttaaaaataat 128  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32178808 agatatagtattgctcgcattactctgtgtagaatgctaaagagtaccctcaagatattggttgagcagccaaaacatgcaactttttgttaaaaataat 32178709  T
Q  129 gtaattattacttaatcaaatgtgaaaacttattactttatatatacaatttgttggtatgttgttataatttttttacctttcacgtaacggg 222  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32178708 gtaattattacttaatcaaa--tgaaaacttattactctatatatacaatttgtcggtatgttgttataatttttttacctttcacgtaacggg 32178617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 46246634 - 46246575
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46246634 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 46246575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12178483 - 12178542
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12178483 ggcttaaatatgtaaaaggtccctctaagttcgcgtgtttttggttttcgtccctgtatc 12178542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 46245122 - 46245181
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46245122 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 46245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 706743 - 706800
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  706743 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgta 706800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 11669841 - 11669898
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  11669841 ggcttaaatatgtaaacggtccctgtaagttcgcatgtttttggttttcgtccatgta 11669898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 27162054 - 27161997
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  27162054 ggcttaaatatgtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgta 27161997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 12180698 - 12180639
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  12180698 ggctaaaatatgttaattgtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 12180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 13420345 - 13420286
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||    
T  13420345 ggcttaaatatgtaaatggcccctgtaagtttgcgtgtttttggttttagtccctgtatc 13420286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 37133708 - 37133649
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||    
T  37133708 ggcttaaatatgtaaatcgtccccgtaagttcgcgtgtttttggttttcgtcactgtatc 37133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 38758376 - 38758317
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  38758376 ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtccctgtatc 38758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 45278026 - 45277967
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  45278026 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 45277967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 708211 - 708154
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  708211 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccatgta 708154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 41591515 - 41591572
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||    
T  41591515 ggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 41591572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 40028460 - 40028516
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  40028460 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 40028516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 8230070 - 8230129
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || | ||||||||||||||||||||||||||    
T  8230070 ggcttaaatatgtaaatcgtccctgtaatttggtgtgtttttggttttcgtccctgtatc 8230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 21715072 - 21715131
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||    
T  21715072 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgattttcgtccctgtatc 21715131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 21716678 - 21716619
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  || ||||||| || ||||||||||||||||||||||||||||    
T  21716678 ggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatc 21716619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 31392058 - 31392117
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||    
T  31392058 ggcttaaatatgtaaatcgtccctgtaatttgacgtgtttttggttttcgtccctgtatc 31392117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 31393718 - 31393659
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  31393718 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatc 31393659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 37348735 - 37348794
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  37348735 ggcttaaatttgtaaatggtccccgtaagttcgcgtgtttttggttttagtccctatatc 37348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 38756655 - 38756714
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||  |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  38756655 ggcttaaatattaaaaaggtccctgtaagttagcgcgtttttggttttagtccctgtatc 38756714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 27160305 - 27160362
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| ||||||||||| |||||||||| | | ||||||||||||||||||||    
T  27160305 ggcttaaataagtaaaaggtccttgtaagttcgtgagattttggttttcgtccctgta 27160362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 32429929 - 32429872
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  32429929 ggcttaaataagtaaaaagtccctgtaagttggcgcgtttttggttttagtccctgta 32429872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 41385868 - 41385811
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| ||||||||||||||||||  ||||| ||||| |||||||||    
T  41385868 ggcttaaatatgtaaatggtccctgtaagttcgcgcattttttgttttggtccctgta 41385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 41593262 - 41593205
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| |||||||||||||||| |  ||||||||||| |||||||||    
T  41593262 ggcttaaatatgtaaatggtccctgtaagttcgtgcatttttggttttggtccctgta 41593205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 11671342 - 11671286
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  ||||| |||||||||||||||||| |||||||||| ||||||    
T  11671342 ttaaatatgtaaatcgtccccgtaagttcgcgtgttttttgttttcgtccatgtatc 11671286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 37350260 - 37350216
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  37350260 ttaaatatgtaaatggtccccgtaagttcgcgtgtttttggtttt 37350216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 3704398 - 3704457
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| |||||  |||| ||||||||||| |||||||||||||||||||| ||||    
T  3704398 ggcttaaataggtaaatcgtccatgtaagttcgcttgtttttggttttcgtccctttatc 3704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 20208523 - 20208464
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||| |||||||||||| | ||||||||| |||| |||||| ||||    
T  20208523 ggcttaaatatgtaaaagatccctgtaagttggtgtgtttttgcttttagtccctctatc 20208464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 25008092 - 25008151
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  25008092 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 25008151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 28848558 - 28848617
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  28848558 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 28848617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 8231692 - 8231634
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  |||||||||| || || ||||||||||||| |||||||||||    
T  8231692 gcttaaatatgtaaatcgtccctgtaatttggcttgtttttggtttttgtccctgtatc 8231634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 37131836 - 37131894
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  ||||  |||||||||||||| |||||||||||| ||||||||    
T  37131836 gcttaaatatgtaaatcgtccacgtaagttcgcgtgtgtttggttttcgttcctgtatc 37131894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 40030088 - 40030030
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||||| || |||||||||| |||||| |||||||||    
T  40030088 ggcttaaatatgtaaatcgtccctgtaatttggcgtgttttttgttttcatccctgtat 40030030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 43546789 - 43546747
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttg 281  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  43546789 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttg 43546747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 14774515 - 14774572
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  ||||| |||||||||| ||||||| |||||||||| ||||||    
T  14774515 cttaaatatgtaaattgtccccgtaagttcgcatgttttttgttttcgtccgtgtatc 14774572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 15224968 - 15225025
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  ||||| |||||||||| ||||||| |||||||||| ||||||    
T  15224968 cttaaatatgtaaattgtccccgtaagttcgcatgttttttgttttcgtccgtgtatc 15225025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 28556246 - 28556303
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||  |||||| || |||||||||||||||| ||| |||||    
T  28556246 ggcttaaatatgtaaaaggtatctgtaatttagcgtgtttttggttttagtctctgta 28556303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 37547934 - 37547991
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| ||||||||||| |||||||| | | |||||||||||| |||||||||    
T  37547934 ggcttaaataagtaaaaggtccttgtaagttggtgcgtttttggttttagtccctgta 37547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 41384149 - 41384206
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| ||||| ||||||||||||  ||||| ||||| |||||||||    
T  41384149 ggcttaaatatgtaaatggtccttgtaagttcgcgcattttttgttttggtccctgta 41384206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 15136998 - 15136946
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    ||||||||||| ||||  |||||||||| |||||||||||||| |||||||||    
T  15136998 ggcttaaatatataaatcgtccctgtaaattcgcgtgtttttgattttcgtcc 15136946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 39787760 - 39787808
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    ||||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  39787760 cttaaatatgtaagaggtccatgtaagtttgcgtgtttttgcttttcgt 39787808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 25009544 - 25009485
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  25009544 ggctttaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 25009485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 31734813 - 31734766
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    |||||||| |||||||  |||| |||||||||||||||||||||||||    
T  31734813 ggcttaaacatgtaaatcgtccttgtaagttcgcgtgtttttggtttt 31734766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 32178838 - 32178807
Alignment:
Q  14 cagagagattgttcaagatatagtattgctag 45  Q
    ||||||||||||||||||||||||||||||||    
T  32178838 cagagagattgttcaagatatagtattgctag 32178807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 32279745 - 32279710
Alignment:
Q  109 aactttttgttaaaaataatgtaattattacttaat 144  Q
    |||||||| |||||||||||||||||||||||||||    
T  32279745 aactttttattaaaaataatgtaattattacttaat 32279710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 41081802 - 41081861
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41081802 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 41081861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 31796893 - 31796834
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31796893 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 31796834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 40499311 - 40499252
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40499311 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 40499252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 32558919 - 32558976
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32558919 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtccctgta 32558976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 31795373 - 31795432
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31795373 ggcttaaatacgtaaaaggtccctgtaagttcgcgtgtttttggttttcggccctgtatc 31795432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 41083330 - 41083271
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  41083330 ggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccccgtatc 41083271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 48566996 - 48567055
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  48566996 ggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtcactgtatc 48567055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 48568589 - 48568531
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  48568589 ggcttaaatatgtaaaaggtctctgtaagttcgcgtgtttttggttttcgtccccgtat 48568531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 32613883 - 32613941
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaa-gttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  32613883 ggcttaaatatgtaaaaggtccttgtaaagttcgcgtgtttttggttttcgtccctgta 32613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 32615702 - 32615648
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  32615702 ttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgtttttgtccctgta 32615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 24613669 - 24613614
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  24613669 cttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 24613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 3150078 - 3150020
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||||||||||||||||||||||  || |||||||||||| ||||||||||    
T  3150078 ggcttaaatatgtaaaaggtccctgtaagttaacgcgtttttggttttagtccctgtat 3150020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 24612279 - 24612329
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24612279 gcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtc 24612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 33781550 - 33781496
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  33781550 ttaaatatgtaaaaggtccctgtaagttcgcgcgttttttgttttcgtccttgta 33781496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 31199249 - 31199306
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  31199249 ggcttgaatatgtaaaaggtccctgtaatttcgcgtattttaggttttcgtccctgta 31199306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 32559942 - 32559885
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||    
T  32559942 ggcttaaatatgtaaaaggtctctgtaagttcgcgtgttttttattttcatccctgta 32559885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 33780657 - 33780714
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  33780657 ggcttaaaaatgtaaaatgtccctgtaagttcgcgtattttttgttttcgtccctgta 33780714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 22942339 - 22942394
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||||  |||||||||||||||| |||||||||||||| |||||||||    
T  22942339 ttaaatatgtaaatcgtccctgtaagttcgcttgtttttggttttcatccctgtat 22942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 33732965 - 33733023
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||| |||||||    
T  33732965 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgttcctgtat 33733023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 3026940 - 3026883
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||||||||||||||||| ||  |||||||||||| |||||||||    
T  3026940 ggcttaaataagtaaaaggtccctgtaagttggcacgtttttggttttagtccctgta 3026883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 30700299 - 30700355
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  ||| || |||||||||||||||||||||||||||| ||||||    
T  30700299 ttaaatatgtaaatcgtctctttaagttcgcgtgtttttggttttcgtccttgtatc 30700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 53527970 - 53528029
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||| ||||||  |||||| ||| || ||||||||||||||||||||||||||||    
T  53527970 ggcttaaatgtgtaaatcgtccctttaatttggcgtgtttttggttttcgtccctgtatc 53528029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 53529593 - 53529534
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||| ||||| |||||||||||||||||    
T  53529593 ggcttaaatatgtaaatcgtccctgtaatttggcgtatttttagttttcgtccctgtatc 53529534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 8391401 - 8391443
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttg 281  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  8391401 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttg 8391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 25529976 - 25529922
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccct 293  Q
    |||||||||| ||||||||||| |||||||| ||| |||||||||||| ||||||    
T  25529976 ggcttaaataagtaaaaggtccttgtaagttggcgcgtttttggttttagtccct 25529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 44458595 - 44458652
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||| ||||    
T  44458595 ggcttaaatatgtaaaaagtccctgtaagttcatgtgttcttgattttcgtccttgta 44458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 33734558 - 33734502
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  |||||||||| || |||||||||||||||| || ||||||||    
T  33734558 ttaaatatgtaaatcgtccctgtaatttagcgtgtttttggttttggttcctgtatc 33734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 41879927 - 41879983
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  ||  ||||||||||| |||||||||||||||||| |||||||    
T  41879927 ttaaatatgtaaatcgtttctgtaagttcgtgtgtttttggttttcgtctctgtatc 41879983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 46725325 - 46725269
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||| |||||||| ||||||||||||||||   ||||||| ||||||    
T  46725325 ttaaatatgtaaaatgtccctgttagttcgcgtgtttttgtaattcgtccttgtatc 46725269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 27320754 - 27320703
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    ||||||||| |||| |||||||||||| || |||| ||||||||||||||||    
T  27320754 gcttaaatacgtaagaggtccctgtaatttagcgtatttttggttttcgtcc 27320703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 31656956 - 31657011
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||||  |||||||||| || || |||||||||||||||||| |||||    
T  31656956 ttaaatatgtaaatcgtccctgtaatttggcatgtttttggttttcgtccttgtat 31657011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 55196574 - 55196633
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| | ||||||||| ||||||||||||  ||||||||||| |||| ||||||    
T  55196574 ggcttaaataagaaaaaggtccttgtaagttcgcgcatttttggttttagtccatgtatc 55196633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 33551588 - 33551641
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccct 293  Q
    ||||||||||||||||||| ||||||||||| ||| |||||| ||||| ||||||    
T  33551588 ggcttaaatatgtaaaagg-ccctgtaagttggcgcgttttttgttttagtccct 33551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 45981407 - 45981449
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttg 281  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||    
T  45981407 ggcttaaatatgtaaaacgtccttgtaatttcgcgtgtttttg 45981449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 5377807 - 5377864
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| ||||||||||||||||| || |||  ||||| ||||| |||||||||    
T  5377807 ggcttaaataagtaaaaggtccctgtaaattggcgcattttttgttttagtccctgta 5377864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 3149265 - 3149321
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||| |||||||||||||||||||| ||  ||||| |||||| |||| ||||||    
T  3149265 ttaaataagtaaaaggtccctgtaagttagccagttttgggttttagtccatgtatc 3149321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 30701899 - 30701847
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    ||||||||||||||||     ||| ||||||||||||||||||||||||||||    
T  30701899 ggcttaaatatgtaaatcactcctttaagttcgcgtgtttttggttttcgtcc 30701847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 40304821 - 40304762
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40304821 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 40304762  T

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Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 40303293 - 40303352
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40303293 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 40303352  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 45493091 - 45493032
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45493091 ggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatc 45493032  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 45499305 - 45499364
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45499305 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 45499364  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 45500833 - 45500774
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45500833 ggcttaaatatgtaaaaggtccctgtaaattcgcgtgtttttggttttcgtccctgtatc 45500774  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 22060538 - 22060480
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22060538 gcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccctatatc 22060480  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 44097412 - 44097354
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  44097412 ggcttaaatatataaaaggtctctgtaagttcgcgtgtttttggttttcgtccctgtat 44097354  T

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Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 7317392 - 7317449
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  7317392 cttaaatatgtaaaagatccctgtaagttcgcgtgtttttggttttcgtccttgtatc 7317449  T

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Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 22054334 - 22054391
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22054334 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 22054391  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6844156 - 6844097
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  6844156 ggcttaaatatgtaaaaggtccttgtaagttcgcgtgtttttggttttcatccttgtatc 6844097  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 22060219 - 22060162
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  22060219 ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctgta 22060162  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 6842718 - 6842774
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  6842718 ttaaatatgtaaaaggttcctgtaagtttgcgtgtttttggttttcatccctgtatc 6842774  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 22053128 - 22053184
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  22053128 ttaaatatgtaaaaggtctttgtaagttcgcgtgttttttgttttcgtccctgtatc 22053184  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 16143655 - 16143596
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||    
T  16143655 ggcttaaatatgtaaaaggtccccgtaagcttgcgtgtttttgattttcgtccctgtatc 16143596  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 28165658 - 28165717
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||    
T  28165658 ggcttaaatatgtaaaaggtccatgtaagttagcgcgtttttggttttagtccctgtatc 28165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 18224904 - 18224847
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || | |||||||||||||| |||||||||    
T  18224904 ggcttaaatatgtaaaaggtccctgtaatttagtgtgtttttggttttagtccctgta 18224847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 43516398 - 43516455
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||    
T  43516398 ggcttaaatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 43516455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 44820989 - 44820932
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||    
T  44820989 ggcttaaatatgtaaaaggtccctgtaaattcgcgcattttttgttttcgtccctgta 44820932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 44465147 - 44465091
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||    
T  44465147 cttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttctcgtccttgtat 44465091  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 28563376 - 28563435
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  28563376 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatc 28563435  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 44492370 - 44492311
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||| | ||| |||||||| ||||||||||||||||||||||| ||||    
T  44492370 ggcttaaatatgtaaacgatccatgtaagtttgcgtgtttttggttttcgtccctctatc 44492311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 10343988 - 10344046
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||||||||||||| |||||||||| |  ||||| ||||||||||||||||    
T  10343988 ggcttaaatatgtaaaaggtccatgtaagttcgtgcattttttgttttcgtccctgtat 10344046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16142226 - 16142284
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||| |||||||||||  |||| ||||||||||||||||||||||||||||| ||||||    
T  16142226 ggctaaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtctctgtat 16142284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 28564014 - 28563957
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||| |||| ||||||||||| |||||||||||| | ||||||||||||||||||||    
T  28564014 ggctttaataagtaaaaggtccttgtaagttcgcgagattttggttttcgtccctgta 28563957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 40128986 - 40128929
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||| ||||||||||||||||||||| ||||||  ||||| |||||||||||||||    
T  40128986 ggcttacatatgtaaaaggtccctgtaatttcgcgcattttttgttttcgtccctgta 40128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 28167386 - 28167330
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||| |||| ||||||    
T  28167386 ttaaataagtaaaaggtccctgtaagttagcgcgtttttggttttagtccttgtatc 28167330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 42928937 - 42928985
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  42928937 cttaaatatgtaaaaggtctctgtaagttcgcgcatttttggttttcgt 42928985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1841814 - 1841755
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||||||| || || |||||||||||||||| |||||||||||    
T  1841814 ggcttaaatatgtaaatcgtccctgaaatttggcgtgtttttggtttttgtccctgtatc 1841755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20587039 - 20587098
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  20587039 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 20587098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 44095359 - 44095398
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttt 279  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  44095359 gcttaaatatgtaaaaggtccatgtaagttcgcgtgtttt 44095398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 20588518 - 20588476
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttg 281  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  20588518 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttg 20588476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 35588127 - 35588185
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||| |||  |||| |||||||||||||| ||||||||||||||| |||||    
T  35588127 ggcttaaatatggaaatcgtccatgtaagttcgcgtgcttttggttttcgtccatgtat 35588185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 13947751 - 13947800
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||||||  |||||||||| || |||||||||||||||||||||    
T  13947751 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 13947800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 14088940 - 14088989
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||||||  |||||||||| || |||||||||||||||||||||    
T  14088940 ttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtcc 14088989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 9262951 - 9262899
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||| ||||||||| |||||||||||||| || ||||||||| ||||    
T  9262951 ggcttaaataagtaaaaggttcctgtaagttcgcgcgtatttggttttagtcc 9262899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 9660846 - 9660893
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttc 287  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  9660846 ggcttaaatatataaaaggtca-tgtaagttcgcgtgtttttggttttc 9660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 38730122 - 38730062
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttgg-ttttcgtccctgtatc 298  Q
    ||||||||||| ||||   ||| ||||||||||||||||||||| ||||||||||||||||    
T  38730122 ggcttaaatatataaatcatccttgtaagttcgcgtgtttttggtttttcgtccctgtatc 38730062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 1840157 - 1840204
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||    
T  1840157 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttt 1840204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 9662234 - 9662192
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttgg 282  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  9662234 ggcttaaatatgtaaa-ggtccctggaagttcgcgtgtttttgg 9662192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 16289033 - 16288974
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||| ||||||||||||  || |||||| ||||| || ||||||||    
T  16289033 ggcttaaatatgtaaaagatccctgtaagttgacgcgttttttgttttagttcctgtatc 16288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 38728185 - 38728243
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  | ||||||||||||| || ||||||||||||||||| ||||||    
T  38728185 ggcttaaatatgtaatcg-tccctgtaagttcacgagtttttggttttcgtccatgtatc 38728243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 40127242 - 40127297
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||| ||||||||||||||||||   |||| ||||| |||||||||    
T  40127242 cttaaatatgtaaatggtccctgtaagttcgcgcaatttttgttttggtccctgta 40127297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 44421401 - 44421342
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||   ||||||||| || |||||||||| |||||||||| ||||||    
T  44421401 ggcttaaatatgtaaatcatccctgtaaattggcgtgttttttgttttcgtccttgtatc 44421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 44906194 - 44906147
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||||||||    
T  44906194 ggcttaaataagtaaaaggtccctataagttagcgcgtttttggtttt 44906147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 43518136 - 43518079
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||| |||| | |||||||||||||| |  ||||||||||| |||||||||    
T  43518136 ggcttaaatatttaaatgatccctgtaagttcgtgcatttttggttttggtccctgta 43518079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 44904532 - 44904585
Alignment:
Q  244 aaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||| |||  ||||||||||| ||||||||||    
T  44904532 aaatatgtaaaaggtctttgtaagttagcgcatttttggttttagtccctgtat 44904585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 31557948 - 31558004
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||| |||||||  || | |||||||||| |||||| ||||    
T  31557948 ttaaatatgtaaaaggtccccgtaagttgacgcgcttttggttttagtccctatatc 31558004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 38624716 - 38624775
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38624716 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccccgtatc 38624775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 16308565 - 16308624
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  16308565 ggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 16308624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 38626229 - 38626170
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  38626229 ggcttaaatatgtaaaaggtccctgtaagttcgcatgtttttggttttcgtccatgtatc 38626170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 27756844 - 27756785
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||    
T  27756844 ggcttaaatatgtaaatcgtccctctaagttcgcgtgttttttgttttcgtccctgtatc 27756785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 28592081 - 28592135
Alignment:
Q  243 taaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  28592081 taaatatgtaaaaggtccttgtaagttcgcgtgttttttattttcgtccctgtat 28592135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 9672410 - 9672353
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||    
T  9672410 ggcttaaatatataaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 9672353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 28592476 - 28592421
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgt 295  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  28592476 ggcttaaatatgtaagaggtcc-tgtaagttcgcgtgttttttgttttcgtccctgt 28592421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 17555063 - 17555004
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttgg-ttttcgtccctgtat 297  Q
    ||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||||||    
T  17555063 ggcttaaatatgtaaattgtccatgtaagttcgcgtgtttttggtttttcgtccctgtat 17555004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 35931405 - 35931350
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  35931405 cttaaataggtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgta 35931350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 12036399 - 12036346
Alignment:
Q  108 taactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||||| |||||| |||||||||||||||||||||||| || |||||||||    
T  12036399 taactttttattaaaagtaatgtaattattacttaatcaaaagtcaaaacttat 12036346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 6102835 - 6102903
Alignment:
Q  93 agcagccaaaacatgtaactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    |||| |||||| | |||||||||| |||||| || ||||||||||||||||||||| || |||||||||    
T  6102835 agcaaccaaaataagtaactttttattaaaagtattgtaattattacttaatcaaaagtcaaaacttat 6102903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 11771201 - 11771257
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |  ||||||| ||||||||||| ||||||||||||||||    
T  11771201 ttaaatatgtaaaaggttcgagtaagtttgcgtgtttttgattttcgtccctgtatc 11771257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 35929523 - 35929579
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||| ||||||||||| |||||||||| | | ||||||||||||||||||||    
T  35929523 gcttaaataagtaaaaggtccttgtaagttcgtgagattttggttttcgtccctgta 35929579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1418995 - 1418936
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| ||  ||||||||| |||||||||||||||||    
T  1418995 ggcttaaatatgtaaatcgtccctgtaatttgacgtgttttttgttttcgtccctgtatc 1418936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 30332283 - 30332342
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||| ||||| |||||||||||||||||    
T  30332283 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatc 30332342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33489958 - 33489899
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| |||||| ||||||||||||| ||| |||||| ||||| |||||||||||    
T  33489958 ggcttaaataagtaaaatgtccctgtaagttagcgcgtttttcgttttagtccctgtatc 33489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8874333 - 8874275
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||||| ||  | ||||||||||||||||||||||||    
T  8874333 ggcttaaatatgtaaatcgtccctgtaatttgacctgtttttggttttcgtccctgtat 8874275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 18201403 - 18201345
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  ||||||||||||| |||||||||| |||||||| | ||||||    
T  18201403 gcttaaatatgtaaattgtccctgtaagtttgcgtgttttttgttttcgttcttgtatc 18201345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 8872522 - 8872579
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||   |||||||||| || ||||||||||||||||||| ||||||||    
T  8872522 cttaaatatgtaattcgtccctgtaatttggcgtgtttttggttttcgttcctgtatc 8872579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 16802025 - 16802102
Alignment:
Q  84 tattgggtgagcagccaaaacatgtaactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    |||||| | |||| ||||||||  ||||||||| | |||| |||||||||||||||||||||||| || |||| ||||    
T  16802025 tattggttaagcaaccaaaacaaataactttttataaaaagtaatgtaattattacttaatcaaaagtcaaaatttat 16802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 25916335 - 25916278
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  |||| ||||| || |||||||||||||||| |||||||||||    
T  25916335 cttaaatatgtaaatcgtccatgtaatttggcgtgtttttggtttttgtccctgtatc 25916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 36619546 - 36619603
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  |||||| ||| || ||||||||||| ||||||||||||||||    
T  36619546 cttaaatatgtaaatcgtccctataatttggcgtgtttttgattttcgtccctgtatc 36619603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 30334066 - 30334007
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||   |||||| ||| || |||||||||||||||| |||||||||||    
T  30334066 ggcttaaatatgtaagtcgtccctataatttggcgtgtttttggtttttgtccctgtatc 30334007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 298
Target Start/End: Complemental strand, 37498934 - 37498895
Alignment:
Q  259 ccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  37498934 ccctataagttcgcgtgtttttggttttcgtccatgtatc 37498895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 39103470 - 39103411
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||| || |||||    
T  39103470 ggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgttccagtatc 39103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 42775420 - 42775462
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttg 281  Q
    ||||||||||||||||| || ||||||| ||||||||||||||    
T  42775420 ggcttaaatatgtaaaacgttcctgtaatttcgcgtgtttttg 42775462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 9670959 - 9671016
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||| ||| |||||| |||||| ||||||||||  ||||| |||||||||||||||    
T  9670959 ggcttacatacgtaaaaagtccctctaagttcgcgctttttttgttttcgtccctgta 9671016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 13373768 - 13373825
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||| |||||||||||||||||||    ||||| ||||||||| |||||    
T  13373768 ggcttaaatatgtcaaaggtccctgtaagttcgtccattttttgttttcgtctctgta 13373825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 16310157 - 16310108
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    |||||||||||||||  |||| ||||||||||  ||||||||||||||||    
T  16310157 gcttaaatatgtaaatcgtccatgtaagttcgtatgtttttggttttcgt 16310108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 33609402 - 33609344
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33609402 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccttgtatc 33609344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 4906129 - 4906186
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4906129 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4906186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 4931998 - 4932055
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4931998 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 22309194 - 22309138
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22309194 ttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatc 22309138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 33607471 - 33607527
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  33607471 ttaaatatgtaaaaggtctctgtaagttcgcgtgtttttggttttcgtccttgtatc 33607527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 4907520 - 4907465
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4907520 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 4933390 - 4933335
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4933390 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 4933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 22307671 - 22307730
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22307671 ggcttaaatatgcaaaaggtccctgtaagttcgcatgtttttggttttagtccctgtatc 22307730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 29756272 - 29756327
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  29756272 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctg 29756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 29757667 - 29757610
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  29757667 ggcttaaatatgtaaaaggtccctgtaagttcacgcatttttggttttcgtccctgta 29757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 21354836 - 21354776
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagtt-cgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  21354836 ggcttaaatatgtaaaagatccctgtaagtttcgcgtgtttttgattttcgtccctgtatc 21354776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 19994498 - 19994557
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  19994498 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 19994557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 35786737 - 35786682
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  35786737 cttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccttgta 35786682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 48713521 - 48713462
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  48713521 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 48713462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 18597913 - 18597855
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||||||||||||||    
T  18597913 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtat 18597855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 38157023 - 38157077
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  38157023 ttaaatatgtaaatcatccctgtaagttcgcgtgtttttggttttcgtccctgta 38157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 23703922 - 23703865
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  23703922 ggcttaaatatgtaaaaggtccctctaagttcgcgcatttttggttttcatccctgta 23703865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 54534981 - 54535034
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgt 295  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  54534981 ttaaatatgtaaatcgtccatgtaagttcgcgtgtttttggttttcgtccctgt 54535034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2671541 - 2671600
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  2671541 ggcttaaataagaaaaaggtccctgtaagttcgcgcatttttggttttagtccctgtatc 2671600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 9561854 - 9561905
Alignment:
Q  247 tatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  9561854 tatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtctctgtatc 9561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 19996113 - 19996054
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||| |||||||||||    
T  19996113 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttggtccctgtatc 19996054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 32082692 - 32082633
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||||||||||||    
T  32082692 ggcttaaatatgtaaatcgtccgtgtaatttggcgtgtttttggttttcgtccctgtatc 32082633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 42889869 - 42889810
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||||||| ||||||||| |||||||||| ||||||    
T  42889869 ggcttaaatatgtaaatcgtccctgtaagttcacgtgttttttgttttcgtccttgtatc 42889810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 42977198 - 42977257
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||||||||||||    
T  42977198 ggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatc 42977257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 42978978 - 42978919
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||||||||||||    
T  42978978 ggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatc 42978919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 44251605 - 44251664
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  44251605 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatc 44251664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 55949012 - 55948953
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||||||||||||    
T  55949012 ggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatc 55948953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 39654731 - 39654673
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||||    
T  39654731 ggcttaaatatttaaaagatccctgtaagttggcgtgattttggttttcgtcactgtat 39654673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 54123604 - 54123546
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  |||||||||| || || ||||||||||||||||||||||||    
T  54123604 ggcttaaatatgtaaatcgtccctgtaatttggcatgtttttggttttcgtccctgtat 54123546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 10337106 - 10337163
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  10337106 cttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatc 10337163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 23702398 - 23702451
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccct 293  Q
    ||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  23702398 gcttaaatatgtaaaaggtccttgtaagttcgcgcattttttgttttcgtccct 23702451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 35785166 - 35785222
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||||||||    
T  35785166 gcttaaatatgtaaaagatccatgtaagttcgcgtattttttgtttttgtccctgta 35785222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 11148350 - 11148397
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  11148350 ggcttaaataagtaaaaggtccctgtaagttagcgcgtttttggtttt 11148397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 22674154 - 22674209
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||||||| ||||    
T  22674154 cttaaatatgtaaaaggtccctataagttcgcgcattttttgttttcgtccttgta 22674209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 24919052 - 24919111
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  || |||||||||| ||||||||||||| ||||| ||||||||    
T  24919052 ggcttaaatatgtaaatcgtacctgtaagtttgcgtgtttttggtcttcgttcctgtatc 24919111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 34538126 - 34538185
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||| |||| ||||||    
T  34538126 ggcttaaatatgtaaaaggtcccggtaagttagcacgtttttggttttagtccttgtatc 34538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 44253251 - 44253192
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||| ||| || ||||||||||||||||||||||| ||||    
T  44253251 ggcttaaatatgtaaatcgtccctttaatttggcgtgtttttggttttcgtccctatatc 44253192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 55947360 - 55947419
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| ||  ||| |||||||||||||||||||||||    
T  55947360 ggcttaaatatgtaaatcgtccctgtaatttgacgtatttttggttttcgtccctgtatc 55947419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 39665274 - 39665322
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    ||||||||||||| ||||||||||||||||||  ||||| |||||||||    
T  39665274 ttaaatatgtaaatggtccctgtaagttcgcgcattttttgttttcgtc 39665322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 54536753 - 54536697
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  |||||||||| |||||||||| |||||||| |||| ||||||    
T  54536753 ttaaatatgtaaatcgtccctgtaaattcgcgtgttcttggtttttgtccatgtatc 54536697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 18597632 - 18597691
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||| ||||  |||| ||||| ||  |||||||||||||||||||||||||||    
T  18597632 ggcttaaatatttaaatcgtccatgtaatttgccgtgtttttggttttcgtccctgtatc 18597691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 39929413 - 39929354
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||    |||||||||||||    
T  39929413 ggcttaaatatgtaaaacgtccatgtaatttcgcgtgtttttgcaaatcgtccctgtatc 39929354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 55017743 - 55017781
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgttttt 280  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  55017743 ttaaatatgtaaatcgtccctgtaagttcgcgtgttttt 55017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 48711860 - 48711917
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  |||| ||||| || |||||||||| |||||||||| ||||||    
T  48711860 cttaaatatgtaaatcgtccttgtaattttgcgtgttttttgttttcgtccttgtatc 48711917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 53142815 - 53142856
Alignment:
Q  120 aaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    |||||| |||||||||||||||||||||| || |||||||||    
T  53142815 aaaaatgatgtaattattacttaatcaaaagttaaaacttat 53142856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 55019416 - 55019359
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| ||||| ||||| ||||||  ||||| |||||| ||||||||    
T  55019416 ggcttaaatatgtaaatggtccttgtaatttcgcgcattttttgttttcttccctgta 55019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 7851597 - 7851553
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    |||||||| |||||||| |||||||||||| |||||||| |||||    
T  7851597 ttaaatatataaaaggttcctgtaagttcgtgtgttttttgtttt 7851553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 9563375 - 9563335
Alignment:
Q  258 tccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||| ||||||||||| ||||| |||||||||||||||||    
T  9563375 tccctttaagttcgcgtattttttgttttcgtccctgtatc 9563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 10338226 - 10338170
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  |||| ||||| || |||||||||||||||| ||| |||||||    
T  10338226 ttaaatatgtaaatcgtccatgtaattttgcgtgtttttggtttttgtctctgtatc 10338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 51100128 - 51100064
Alignment:
Q  99 caaaacatgtaactttttg-ttaaaaa-taatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||| ||||||||||  ||||||| || ||||||||||||||||||||| || |||||||||    
T  51100128 caaaacaagtaacttttttattaaaaagtagtgtaattattacttaatcaaaagttaaaacttat 51100064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 50315318 - 50315375
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50315318 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtctctgta 50315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 24437074 - 24437133
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24437074 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgttttttgttttcgtcactgtatc 24437133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 46604439 - 46604497
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  46604439 ggcttaaatatgtaaaaggtccctgtaagtttgcgtgtttttggttttcgtccttgtat 46604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 8323498 - 8323441
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8323498 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 8323441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 31815829 - 31815772
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31815829 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 31815772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 9626469 - 9626525
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9626469 gcttaaatatgtaaaaggtccctgtaagttcgcgtattttttgttttcgtccctgta 9626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 22684209 - 22684150
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  22684209 ggctttaatatgtaaaaggtccttgtaagttcgcgtgtttttggttttcgtccatgtatc 22684150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 8322521 - 8322578
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  8322521 ggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 8322578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 31809989 - 31810046
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  31809989 ggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctgta 31810046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 10708030 - 10708077
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10708030 ggcttaaatatgtaaaaagtccctgtaagttcgcgtgtttttggtttt 10708077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 16673315 - 16673256
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  16673315 ggcttaaatatgtaaatcgtccctgtaattttgcgtgtttttggttttcgtccctgtatc 16673256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 24439007 - 24438948
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  24439007 ggctaaaatatgtaaatcgtccctgtaaattcgcgtgtttttggttttcgtccctgtatc 24438948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 26734426 - 26734481
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  26734426 ggcttaaatatgtaaaaggtccatgtaagttcgcgcatttttggttttcgtccctg 26734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33259431 - 33259372
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  33259431 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 33259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33279590 - 33279531
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  33279590 ggcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 33279531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 12095877 - 12095935
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  12095877 ggcttaaataagtaaaaggtccctgtaagttcgtgcgtttttggttttagtccctgtat 12095935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 16592022 - 16592080
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  16592022 gcttaaatatgtaaattgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 16592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 32847814 - 32847871
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||    
T  32847814 ggcttaaataagtaaaaggtccctgtaagttggcgcgtttttggttttagtccctgta 32847871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 31321028 - 31321068
Alignment:
Q  258 tccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31321028 tccctgtaagttcgcgtgtttttggttttcgtccctgtatc 31321068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 40767618 - 40767674
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  40767618 ttaaatatgtaaaaggtctctgtaagtttgcgcgtttttggttttagtccctgtatc 40767674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 50317106 - 50317050
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  50317106 ttaaatatgtaaatcgtccatgtaagttcgcgtgtttttgattttcgtccctgtatc 50317050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7184323 - 7184382
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  || | ||||||||||||||||||||||||||||| |||||||    
T  7184323 ggcttaaatatgtaaattgttcttgtaagttcgcgtgtttttggttttcgtctctgtatc 7184382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7655323 - 7655264
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  || ||||||| || ||||||||||||||||||||||||||||    
T  7655323 ggcttaaatatgtaaatcgttcctgtaatttggcgtgtttttggttttcgtccctgtatc 7655264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12097999 - 12097941
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  12097999 ggcttaaataagtaaaaggtccccgtaagttcgcgcatttttggttttagtccctgtat 12097941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 9627640 - 9627583
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||| |||||||||||||  ||||| |||||||| ||||||    
T  9627640 ggcttaaatatgtaaaaggtctctgtaagttcgcgcattttttgttttcgttcctgta 9627583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 11431388 - 11431331
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||||||||||||||||| ||| |||||| ||||| |||||||||    
T  11431388 ggcttaaataagtaaaaggtccctgtaagttggcgcgtttttcgttttagtccctgta 11431331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 28251931 - 28251988
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||| ||||||||||||||| || |||  |||||||||||||||||||||    
T  28251931 ggcttaaatatgcaaaaggtccctgtaatttagcgcatttttggttttcgtccctgta 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 33753635 - 33753692
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||| ||| |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  33753635 ggcttacataggtaaaaggtccctgtaagttcgcgagattttggttttcgtccttgta 33753692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 42301679 - 42301622
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||    
T  42301679 ggcttaaatatgtaaaaggttcctctaagttcgcgtattttttgttttcgtccttgta 42301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 52793704 - 52793761
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||| ||||||||||||||||||||   ||||| |||||||||||||||    
T  52793704 ggcttaaatatgttaaaggtccctgtaagttcgctcattttttgttttcgtccctgta 52793761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 9419877 - 9419825
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||||||||||||||| |||||||| ||||||||||| |||| ||||    
T  9419877 ggcttaaatatgtaaaaggtccttgtaagttggcgtgtttttgcttttagtcc 9419825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 13211168 - 13211112
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||   |||||||||||| | ||||||||||||||||||||||||||    
T  13211168 ttaaatatgtaaatcttccctgtaagtttgtgtgtttttggttttcgtccctgtatc 13211112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 18604627 - 18604583
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggt 283  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  18604627 ggcttaaatatgtaaaagatccctgtaagttcgcgtgcttttggt 18604583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 44268891 - 44268935
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  44268891 ttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggtttt 44268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7653686 - 7653745
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||| ||||| |||||||||||||||||    
T  7653686 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatc 7653745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 10612189 - 10612138
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    |||||||||||||||||||||| | |||||||| ||||||||| ||||||||    
T  10612189 ggcttaaatatgtaaaaggtccttataagttcgtgtgtttttgcttttcgtc 10612138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 13222914 - 13222973
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| |||||||||||||||||||| ||  |||||||||||| |||| ||||||    
T  13222914 ggcttaaataagtaaaaggtccctgtaagttagcacgtttttggttttagtccgtgtatc 13222973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 14095721 - 14095776
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||| | |||||||||||||||||||  ||||||||| |||||    
T  14095721 ttaaatatgtaaaaggttcatgtaagttcgcgtgttttttattttcgtccatgtat 14095776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 33257881 - 33257940
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||| |||| ||||||    
T  33257881 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatc 33257940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 33278053 - 33278112
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||| |||| ||||||    
T  33278053 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggtttttgtccttgtatc 33278112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 36145344 - 36145403
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || |||| ||||| |||||||||||||||||    
T  36145344 ggcttaaatatgtaaatcgtccctgtaatttggcgtattttttgttttcgtccctgtatc 36145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 46652840 - 46652781
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  46652840 ggcttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 46652781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 31027226 - 31027284
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||| ||||||||||  |||||||| ||||| || |||||||    
T  31027226 gcttaaatatgtaaaaggtccatgtaagttcgtatgtttttgcttttcttctctgtatc 31027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 31028723 - 31028673
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    ||||||||||| |||||||||| | |||||||||||||||||| |||||||    
T  31028723 ggcttaaatatataaaaggtccttataagttcgcgtgtttttgcttttcgt 31028673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 31035693 - 31035643
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    ||||||||||| |||||||||| | |||||||||||||||||| |||||||    
T  31035693 ggcttaaatatataaaaggtccttataagttcgcgtgtttttgcttttcgt 31035643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 41668273 - 41668331
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  ||| |||||| || |||||||||||||||||||| ||||||    
T  41668273 ggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtctctgtat 41668331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 35383115 - 35383058
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| ||||||||||||  |||||| ||| |||||||||||| |||||||||    
T  35383115 ggcttaaataagtaaaaggtcccgataagttggcgcgtttttggttttagtccctgta 35383058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 27513 - 27573
Alignment:
Q  101 aaacatgtaactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||| |||||||||| | |||| || ||||||||||||||||||||| || |||||||||    
T  27513 aaacaagtaactttttataaaaagtagtgtaattattacttaatcaaaagtcaaaacttat 27573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 13229333 - 13229273
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtg-tttttggttttcgtccctgtatc 298  Q
    |||||||||||| |||||||||||||||||| ||| | |||||||||||  ||||||||||    
T  13229333 ggcttaaatatgcaaaaggtccctgtaagttagcgcgttttttggttttaatccctgtatc 13229273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7185915 - 7185856
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||| |||  |||| |||||||| || ||||||| |||||||||||||||||    
T  7185915 ggcttaaatatgcaaatcgtccttgtaagtttgcatgttttttgttttcgtccctgtatc 7185856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 28919083 - 28919142
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||| ||||  |||||||||| || ||||||||||| ||||| ||||||||||    
T  28919083 ggcttaaatatataaattgtccctgtaatttggcgtgtttttgattttcatccctgtatc 28919142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 28920714 - 28920655
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||   |||||||||| || |||||||||| ||||| |||||||||||    
T  28920714 ggcttaaatatgtaagtcgtccctgtaatttggcgtgttttttgtttttgtccctgtatc 28920655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 32849988 - 32849933
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||| ||||||||||||||||| || ||| |||||| ||||| |||||||    
T  32849988 ggcttaaataagtaaaaggtccctgtaaattggcgcgttttttgttttagtccctg 32849933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 33981504 - 33981551
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    ||||||||||||||||  |||||| |||||||| ||||||||||||||    
T  33981504 ggcttaaatatgtaaatcgtccctataagttcgtgtgtttttggtttt 33981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 35381385 - 35381436
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    ||||||||| ||||||||| |||||||||| ||| |||||||||||| ||||    
T  35381385 gcttaaataagtaaaaggtacctgtaagttggcgcgtttttggttttagtcc 35381436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 44269133 - 44269074
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||| |||||| |||||||||||||| ||||| ||||| ||||    
T  44269133 ggcttaaatatgtaaatcgtctctgtaaattcgcgtgtttttgattttcatccctatatc 44269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 33755375 - 33755325
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgt 289  Q
    |||||||||| ||||||||||| |||||||||| | | |||||||||||||    
T  33755375 ggcttaaataagtaaaaggtccttgtaagttcgtgagattttggttttcgt 33755325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 27160379 - 27160338
Alignment:
Q  120 aaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||| ||||||||||||||||||||| || |||||||||    
T  27160379 aaaaatagtgtaattattacttaatcaaaagtcaaaacttat 27160338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 27524265 - 27524322
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||| ||| || |||  ||||| ||||| |||||||||    
T  27524265 ggcttaaatatgtaaaaggtccctataatttagcgcattttttgtttttgtccctgta 27524322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 46605981 - 46605924
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| | |||||||||||| |||| |||| |||||| ||||| |||||||||    
T  46605981 ggcttaaataagaaaaaggtccctgaaagtccgcgcgttttttgttttagtccctgta 46605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12131 - 12190
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  12131 ggcttaaatatgtaaaaggttccggtaagttcgcgtgtttttggttttcgtccctgtatc 12190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 8e-21; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 3158096 - 3158037
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3158096 ggcttaaatatgtaaatcgtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 3158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 39884616 - 39884675
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  39884616 ggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatc 39884675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 39886135 - 39886076
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  39886135 ggcttaaatatgtaaatggtccctgtaagttcgcgtgtttttggttttagtccctgtatc 39886076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 357977 - 358034
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  357977 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 358034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 45448551 - 45448499
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45448551 ggcttaaatatgtaaaaggtccctctaagttcgcgtgtttttggttttcgtcc 45448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 36899898 - 36899955
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  36899898 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccctgta 36899955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 359373 - 359318
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  359373 ggcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccctg 359318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 22714108 - 22714050
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||||    
T  22714108 ggcttaaatatgtaaatcgcccctgtaagttcgtgtgtttttggttttcgtccctgtat 22714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17706165 - 17706222
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  17706165 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttggttttagtccttgta 17706222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 21142480 - 21142536
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||    
T  21142480 gcttaaatatgtaaaaggtccctgtaagttcgcgcattttttgttttcgtccttgta 21142536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 25264340 - 25264399
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||||    
T  25264340 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccttgtatc 25264399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 15279691 - 15279641
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  15279691 gcttaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtc 15279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 15460060 - 15460010
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  15460060 gcttaaatatgtaaatcgtccttgtaagttcgcgtgtttttggttttcgtc 15460010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 17707507 - 17707450
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||| ||||| ||||| || |||||||||||||||| |||||||||    
T  17707507 ggcttaaatatgtaaatggtccatgtaatttagcgtgtttttggttttagtccctgta 17707450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 36901236 - 36901179
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||| ||| |||||    
T  36901236 ggcttaaatatgtaaaaggtccctgtaatttagcgtgtttttgtttttagtctctgta 36901179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 27339244 - 27339188
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||| ||||||||||||||| ||||||| |||||||| ||||||    
T  27339244 gcttaaatatataaaagatccctgtaagttcgcatgttttttgttttcgttcctgta 27339188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1650269 - 1650210
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||||||||||||||||| |||||||| | ||||||    
T  1650269 ggcttaaatatgtaaaccgtccttgtaagttcgcgtgtttttagttttcgttcatgtatc 1650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 25265964 - 25265905
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||| |||||| || |||||||||| |||||||||||||||||    
T  25265964 ggcttaaatatgtaaatcgtctctgtaatttggcgtgttttttgttttcgtccctgtatc 25265905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 26720307 - 26720252
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    ||||||||||||||||   ||||  |||||||||||||||||||||||||||||||    
T  26720307 ggcttaaatatgtaaataatccccataagttcgcgtgtttttggttttcgtccctg 26720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 7272900 - 7272957
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||| |||||||||| ||||||||| |||  ||||||||||| |||||||||    
T  7272900 ggcttaaataagtaaaaggtctctgtaagttggcgcatttttggttttagtccctgta 7272957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 18131198 - 18131251
Alignment:
Q  93 agcagccaaaacatgtaactttttgttaaaaataatgtaattattacttaatca 146  Q
    |||| |||||||| |||||||||| |||||| || |||||||||||||||||||    
T  18131198 agcaaccaaaacaagtaactttttattaaaagtagtgtaattattacttaatca 18131251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 40607320 - 40607373
Alignment:
Q  108 taactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||||| |||||| || ||||||||||||||||||||| || |||||||||    
T  40607320 taactttttattaaaagtagtgtaattattacttaatcaaaagtcaaaacttat 40607373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7274710 - 7274651
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| | ||||||||||||||||||||||  ||||| ||||| || ||||||||    
T  7274710 ggcttaaataagaaaaaggtccctgtaagttcgcgcattttttgttttagttcctgtatc 7274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 26719385 - 26719444
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||| |||||||||   ||| ||||||||||||||||||| |||||||||| ||||||    
T  26719385 ggcttatatatgtaaatcatccatgtaagttcgcgtgttttttgttttcgtccttgtatc 26719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33295504 - 33295445
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||| |||||| || |||||||||| ||||| |||||||||||    
T  33295504 ggcttaaatatgtaaatcgtctctgtaatttggcgtgttttttgtttttgtccctgtatc 33295445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 2552408 - 2552462
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctg 294  Q
    |||||||||||||||  ||| ||||||||| ||||||||||| || |||||||||    
T  2552408 gcttaaatatgtaaatcgtctctgtaagtttgcgtgtttttgattatcgtccctg 2552462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 37963275 - 37963325
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    ||||||||||||||||||||| ||||| || ||| |||||| |||||||||    
T  37963275 gcttaaatatgtaaaaggtccttgtaacttagcgcgttttttgttttcgtc 37963325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 5461936 - 5461985
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtc 290  Q
    ||||||||||||||  ||| | |||||||||||||||||| |||||||||    
T  5461936 cttaaatatgtaaatcgtcaccgtaagttcgcgtgttttttgttttcgtc 5461985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 27411299 - 27411242
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||| || |||  ||| |||||||  ||||||||    
T  27411299 ggcttaaatatgtaaaaggtccctgtaatttagcgcatttatggtttttatccctgta 27411242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 37964701 - 37964645
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgt 295  Q
    |||||||||| ||||||||||||||||| || | |  ||||| ||||||||||||||    
T  37964701 ggcttaaatacgtaaaaggtccctgtaatttagtgcattttttgttttcgtccctgt 37964645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 1443417 - 1443475
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  1443417 ggcttaaatatgtgaaaggtccctgtaagttcacgtgtttttggttttcgtccctgtat 1443475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 11065713 - 11065656
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11065713 ggcttaaatatgtaaaaggtccttgtaagttcgcgcatttttggttttcgtccctgta 11065656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1258499 - 1258440
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  1258499 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctgtatc 1258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 842186 - 842243
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||    
T  842186 ggcttaaatatgtataaggtccctgtaagttcgcgcattttttgttttcgtccctgta 842243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 7796749 - 7796806
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||||    
T  7796749 ggcttaaatatgtaaaaggtcccagtaagttcgcgcatttttggtttttgtccctgta 7796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 843580 - 843524
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttgg-ttttcgtccctg 294  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  843580 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggtttttcgtccctg 843524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 1256714 - 1256773
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||||||||||||    
T  1256714 ggcttaaatatgtaaatcgtccttgtaatttggcgtgtttttggttttcgtccctgtatc 1256773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 8745432 - 8745491
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||    
T  8745432 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttggttttcgtccctatatc 8745491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 10707676 - 10707734
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||| ||||  ||||||||||||||||||||||||  |||||||||||||||    
T  10707676 ggcttaaatatataaattgtccctgtaagttcgcgtgttttttattttcgtccctgtat 10707734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 19084178 - 19084120
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  |||||||||| || |||||||||||||||| |||||||||||    
T  19084178 gcttaaatatgtaaaccgtccctgtaatttagcgtgtttttggtttttgtccctgtatc 19084120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 30321220 - 30321166
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||| ||||||||||| |  |||||||||||||||||||||    
T  30321220 ttaaatatgtaaaaggtctctgtaagttcgtgcatttttggttttcgtccctgta 30321166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 8752857 - 8752800
Alignment:
Q  241 cttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||  ||| |||||| || ||||||||||||||||||||||||||||    
T  8752857 cttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtccctgtatc 8752800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 19402181 - 19402124
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||| |||||||||||   ||||| |||||||||||||||    
T  19402181 ggcttaaatatgtaaaaggtccttgtaagttcgcacattttttgttttcgtccctgta 19402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 28048980 - 28049027
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggtttt 286  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  28048980 ggcttaaatatatcaaaggtctctgtaagttcgcgtgtttttggtttt 28049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 20208113 - 20208051
Alignment:
Q  99 caaaacatgtaactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||||||||| || || ||||||    
T  20208113 caaaacaagtagctttttattaaaagtaatgtaattattacttaatcaaaagtcaatacttat 20208051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 22102136 - 22102074
Alignment:
Q  99 caaaacatgtaactttttgttaaaaataatgtaattattacttaatcaaatgtgaaaacttat 161  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||||||||| || || ||||||    
T  22102136 caaaacaagtagctttttattaaaagtaatgtaattattacttaatcaaaagtcaatacttat 22102074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 19598036 - 19597984
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtcc 291  Q
    |||||||||||||||| ||||||||||||| ||||  ||||||||||| ||||    
T  19598036 ggcttaaatatgtaaatggtccctgtaagtccgcgcatttttggttttggtcc 19597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7678706 - 7678647
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  |||||||||| || ||||||||||| |||| |||| ||||||    
T  7678706 ggcttaaatatgtaaatcgtccctgtaatttggcgtgtttttgctttttgtccttgtatc 7678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 2956293 - 2956235
Alignment:
Q  240 gcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||||  |||||||||| ||   ||||||||||||||||||| ||||||    
T  2956293 gcttaaatatgtaaatcgtccctgtaatttgatgtgtttttggttttcgtccttgtatc 2956235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 4496505 - 4496563
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    |||||||||| |||||  |||  ||||||||| |||||||||||||||||||| |||||    
T  4496505 ggcttaaataggtaaatcgtcattgtaagttcacgtgtttttggttttcgtccatgtat 4496563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 19596343 - 19596400
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||  |||||| ||||||||||  ||||||||||| |||| ||||    
T  19596343 ggcttaaatatgtaaattgtccctataagttcgcgcatttttggttttggtccttgta 19596400  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 20773500 - 20773443
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    ||||||||||||||||||||| || |||||| |||  ||||| |||||| ||||||||    
T  20773500 ggcttaaatatgtaaaaggtctctataagtttgcgcattttttgttttcatccctgta 20773443  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 33469856 - 33469800
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||| ||  ||||||||||||||| ||||||||  ||||||| ||||||||    
T  33469856 ttaaatatgtgaattgtccctgtaagttcgtgtgttttttattttcgttcctgtatc 33469800  T

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Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 4316 - 4259
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4316 ggcttaaatatgtaaaaggtccctgtaagttcgcgcatttttggttttcgtccctgta 4259  T

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Target: scaffold1118 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 2420 - 2471
Alignment:
Q  247 tatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2420 tatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctatatc 2471  T

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Target: scaffold1176 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2051 - 2110
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||    
T  2051 ggcttaaatatgaaaaatgtccttgtaagttcgcgtgtttttggtttccgtccctgtatc 2110  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 13310 - 13253
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgta 296  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||||    
T  13310 ggcttaaatatgtaaaaggtccctgtaagttcacgcattttttgttttcgttcctgta 13253  T

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Target: scaffold0633 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 6953 - 6895
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtat 297  Q
    ||||||||||||||||  ||| |||||| || |||||||||||||||||||| ||||||    
T  6953 ggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggttttcgtctctgtat 6895  T

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Target: scaffold0524 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 7701 - 7757
Alignment:
Q  242 ttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    |||||||||||||| |||||||||| ||||||||||||||    |||||||||||||    
T  7701 ttaaatatgtaaaacgtccctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 7757  T

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Target: scaffold0489 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6874 - 6815
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||  ||| |||||| || |||||||||||||||| || ||||||||    
T  6874 ggcttaaatatgtaaatcgtctctgtaatttggcgtgtttttggtttttgttcctgtatc 6815  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 193591 - 193650
Alignment:
Q  239 ggcttaaatatgtaaaaggtccctgtaagttcgcgtgtttttggttttcgtccctgtatc 298  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    |||||||||||||    
T  193591 ggcttaaatatgtaaaacgtctctgtaatttcgcgtgtttttgcaaatcgtccctgtatc 193650  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 18158 - 18054
Alignment:
Q  59 agaatgctaaagagtaccttcaaaatattgggtgagcagccaaaacatgtaactttttgttaaaaa--taatgtaattattacttaatcaaatgtgaaaa 156  Q
    ||||||||||| |||||| |||    ||||| | |||| |||||||| |||||||||| | |||||  |  ||||||||||||||||||||| || ||||    
T  18158 agaatgctaaacagtaccgtcagggcattggttaagcaaccaaaacaagtaactttttataaaaaaagttgtgtaattattacttaatcaaaagtcaaaa 18059  T
Q  157 cttat 161  Q
    |||||    
T  18058 cttat 18054  T

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