View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9092_high_6 (Length: 238)
Name: NF9092_high_6
Description: NF9092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9092_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 8818300 - 8818170
Alignment:
| Q |
100 |
ctgaatagcttcaaagagttgaatgatattaggatgatgaatagtactaagaatagaaatctctttgatgagattatctctaactttagaactcaattgg |
199 |
Q |
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| T |
8818300 |
ctgaatagcttcaaagagttgaatgatattaggatgatgaatagtactaagaatagaaatctctttgatgagattatctctaactttagaactcaattgg |
8818201 |
T |
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| Q |
200 |
gtcttatcaatttccttaattgctacctcca |
230 |
Q |
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| T |
8818200 |
gtcttatcaatttccttaattgctacctcca |
8818170 |
T |
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