View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9095_low_17 (Length: 317)

Name: NF9095_low_17
Description: NF9095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9095_low_17
NF9095_low_17
[»] chr7 (45 HSPs)
chr7 (1-300)||(27363120-27363432)
chr7 (111-155)||(34000276-34000320)
chr7 (231-285)||(12278834-12278888)
chr7 (116-156)||(42227807-42227847)
chr7 (240-289)||(11665442-11665491)
chr7 (111-176)||(45425467-45425532)
chr7 (111-143)||(37451252-37451284)
chr7 (111-159)||(39926537-39926585)
chr7 (238-285)||(18233604-18233651)
chr7 (111-178)||(27833381-27833448)
chr7 (238-285)||(38134412-38134459)
chr7 (129-176)||(41237906-41237953)
chr7 (238-285)||(43249999-43250046)
chr7 (241-287)||(19930945-19930991)
chr7 (111-157)||(45151391-45151437)
chr7 (126-171)||(2512338-2512383)
chr7 (240-285)||(3721101-3721146)
chr7 (240-285)||(5835255-5835300)
chr7 (240-289)||(6630914-6630963)
chr7 (240-285)||(7328697-7328742)
chr7 (111-148)||(10362314-10362351)
chr7 (237-282)||(16341501-16341546)
chr7 (240-285)||(19206058-19206103)
chr7 (240-285)||(20549799-20549844)
chr7 (123-156)||(23221418-23221451)
chr7 (236-285)||(23849464-23849513)
chr7 (240-285)||(26733312-26733357)
chr7 (240-285)||(27732245-27732290)
chr7 (111-144)||(34568347-34568380)
chr7 (127-156)||(40449330-40449359)
chr7 (113-154)||(45272336-45272377)
chr7 (111-171)||(3584218-3584278)
chr7 (91-176)||(8237614-8237701)
chr7 (239-291)||(15902829-15902881)
chr7 (243-283)||(17307904-17307944)
chr7 (240-284)||(17851439-17851483)
chr7 (111-171)||(21322189-21322249)
chr7 (245-285)||(22602716-22602756)
chr7 (240-284)||(22868050-22868094)
chr7 (240-284)||(32308128-32308172)
chr7 (123-155)||(34897536-34897568)
chr7 (111-155)||(39106666-39106710)
chr7 (112-144)||(40854936-40854968)
chr7 (112-156)||(44651620-44651664)
chr7 (123-155)||(44868158-44868190)
[»] chr2 (51 HSPs)
chr2 (111-168)||(13000699-13000756)
chr2 (111-171)||(5168566-5168626)
chr2 (111-160)||(40967369-40967418)
chr2 (239-291)||(4229408-4229460)
chr2 (123-168)||(21497693-21497738)
chr2 (240-289)||(37411246-37411295)
chr2 (233-285)||(24011037-24011089)
chr2 (123-171)||(27889315-27889363)
chr2 (123-171)||(30243276-30243324)
chr2 (123-167)||(41542974-41543018)
chr2 (111-162)||(5028870-5028921)
chr2 (238-285)||(10535765-10535812)
chr2 (240-283)||(21616770-21616813)
chr2 (111-157)||(12413507-12413553)
chr2 (111-157)||(12425567-12425613)
chr2 (238-284)||(18570978-18571024)
chr2 (123-157)||(24581018-24581052)
chr2 (111-157)||(28202311-28202357)
chr2 (118-168)||(32407553-32407603)
chr2 (119-157)||(35281212-35281250)
chr2 (111-157)||(44488011-44488057)
chr2 (123-160)||(3196586-3196623)
chr2 (240-285)||(5367200-5367245)
chr2 (240-285)||(12668429-12668474)
chr2 (123-156)||(14735895-14735928)
chr2 (240-285)||(23718034-23718079)
chr2 (240-285)||(24105706-24105751)
chr2 (123-176)||(29544653-29544706)
chr2 (123-168)||(30045479-30045524)
chr2 (123-168)||(30050642-30050687)
chr2 (123-168)||(30141686-30141731)
chr2 (119-160)||(31837934-31837975)
chr2 (123-168)||(32957533-32957578)
chr2 (111-160)||(33401574-33401623)
chr2 (111-156)||(34376900-34376945)
chr2 (231-284)||(35449512-35449565)
chr2 (119-156)||(41939110-41939147)
chr2 (240-285)||(44860328-44860373)
chr2 (111-155)||(10332278-10332322)
chr2 (124-176)||(10735813-10735865)
chr2 (127-167)||(12126899-12126939)
chr2 (128-156)||(14414894-14414922)
chr2 (111-155)||(20120724-20120768)
chr2 (123-171)||(27848184-27848232)
chr2 (111-143)||(32844877-32844909)
chr2 (128-168)||(35065618-35065658)
chr2 (92-157)||(36264480-36264547)
chr2 (240-292)||(39279683-39279735)
chr2 (123-167)||(40295449-40295493)
chr2 (116-156)||(42451452-42451492)
chr2 (111-143)||(44868433-44868465)
[»] chr4 (54 HSPs)
chr4 (111-171)||(9783913-9783973)
chr4 (111-156)||(46434762-46434807)
chr4 (111-156)||(56096218-56096263)
chr4 (93-157)||(30135134-30135200)
chr4 (111-154)||(39842016-39842059)
chr4 (121-168)||(47704606-47704653)
chr4 (207-277)||(32910526-32910596)
chr4 (111-168)||(7230294-7230351)
chr4 (92-160)||(37735783-37735852)
chr4 (111-168)||(56551582-56551639)
chr4 (92-157)||(14202480-14202547)
chr4 (123-171)||(34042266-34042314)
chr4 (122-162)||(34968005-34968045)
chr4 (112-156)||(54677240-54677284)
chr4 (111-162)||(11300689-11300740)
chr4 (238-285)||(14465300-14465347)
chr4 (238-285)||(24343513-24343560)
chr4 (110-157)||(36479004-36479051)
chr4 (240-283)||(36635332-36635375)
chr4 (116-171)||(49385293-49385348)
chr4 (222-289)||(5654591-5654660)
chr4 (241-291)||(11110212-11110262)
chr4 (238-284)||(18513248-18513294)
chr4 (111-157)||(22040664-22040710)
chr4 (240-282)||(22440609-22440651)
chr4 (123-157)||(32923204-32923238)
chr4 (93-176)||(43034324-43034409)
chr4 (102-156)||(47016623-47016677)
chr4 (111-145)||(50650940-50650974)
chr4 (240-281)||(903930-903971)
chr4 (111-159)||(1701622-1701671)
chr4 (111-156)||(4911603-4911647)
chr4 (240-285)||(5775364-5775409)
chr4 (222-267)||(10546138-10546183)
chr4 (127-168)||(10564455-10564496)
chr4 (116-157)||(12058338-12058379)
chr4 (238-283)||(20743286-20743331)
chr4 (123-156)||(22411790-22411823)
chr4 (123-156)||(23160066-23160099)
chr4 (116-157)||(29568605-29568646)
chr4 (239-284)||(31243555-31243600)
chr4 (119-156)||(32006522-32006559)
chr4 (111-152)||(36071158-36071199)
chr4 (240-285)||(40613458-40613503)
chr4 (111-144)||(54587914-54587947)
chr4 (236-280)||(3634909-3634953)
chr4 (116-176)||(6460173-6460233)
chr4 (241-281)||(9996849-9996889)
chr4 (233-285)||(19230315-19230367)
chr4 (116-152)||(28311495-28311531)
chr4 (123-171)||(28435235-28435283)
chr4 (116-168)||(37921765-37921817)
chr4 (241-289)||(40699933-40699981)
chr4 (123-155)||(48159703-48159735)
[»] chr8 (37 HSPs)
chr8 (93-171)||(13357428-13357508)
chr8 (240-289)||(34897093-34897142)
chr8 (240-295)||(7658471-7658526)
chr8 (119-157)||(18959171-18959209)
chr8 (111-161)||(42208466-42208516)
chr8 (123-168)||(3650546-3650591)
chr8 (240-289)||(24362204-24362253)
chr8 (123-171)||(1230648-1230696)
chr8 (123-167)||(8717466-8717510)
chr8 (123-171)||(19260566-19260614)
chr8 (111-143)||(19701359-19701391)
chr8 (123-159)||(32115405-32115441)
chr8 (240-295)||(4786334-4786389)
chr8 (124-167)||(13449788-13449831)
chr8 (238-285)||(33382025-33382072)
chr8 (238-285)||(44067522-44067569)
chr8 (234-284)||(3025553-3025603)
chr8 (126-176)||(25136826-25136876)
chr8 (111-157)||(28439973-28440019)
chr8 (239-281)||(34201056-34201098)
chr8 (119-157)||(45049597-45049635)
chr8 (240-281)||(4611542-4611583)
chr8 (111-168)||(5179807-5179864)
chr8 (123-168)||(9241041-9241086)
chr8 (111-152)||(10320510-10320551)
chr8 (240-285)||(11927092-11927137)
chr8 (123-176)||(12748927-12748980)
chr8 (240-285)||(13844602-13844647)
chr8 (240-285)||(14134707-14134752)
chr8 (111-160)||(30874734-30874782)
chr8 (240-285)||(31236583-31236628)
chr8 (125-178)||(32286344-32286397)
chr8 (225-293)||(1639483-1639551)
chr8 (123-171)||(6471537-6471585)
chr8 (240-284)||(8798838-8798882)
chr8 (238-274)||(30068045-30068081)
chr8 (123-171)||(32051519-32051567)
[»] chr6 (50 HSPs)
chr6 (118-171)||(10018420-10018473)
chr6 (111-167)||(33824895-33824951)
chr6 (111-157)||(24623318-24623364)
chr6 (123-160)||(1989041-1989078)
chr6 (123-156)||(2105931-2105964)
chr6 (123-168)||(2617195-2617240)
chr6 (123-156)||(4826316-4826349)
chr6 (240-285)||(7265599-7265644)
chr6 (244-289)||(8931604-8931649)
chr6 (240-285)||(9025500-9025545)
chr6 (240-285)||(9195760-9195805)
chr6 (240-289)||(13851744-13851793)
chr6 (234-287)||(21142120-21142173)
chr6 (244-289)||(26562701-26562746)
chr6 (123-167)||(16390455-16390499)
chr6 (240-284)||(19040360-19040404)
chr6 (111-171)||(24248179-24248239)
chr6 (238-285)||(12086351-12086398)
chr6 (121-156)||(12459743-12459778)
chr6 (123-178)||(23635694-23635749)
chr6 (238-285)||(34446571-34446618)
chr6 (233-267)||(2140505-2140539)
chr6 (111-161)||(9333977-9334027)
chr6 (244-286)||(11591875-11591917)
chr6 (123-157)||(15169957-15169991)
chr6 (123-157)||(15178729-15178763)
chr6 (233-283)||(17168895-17168945)
chr6 (229-267)||(29711259-29711297)
chr6 (111-157)||(31971543-31971589)
chr6 (240-285)||(7086803-7086848)
chr6 (238-283)||(7569176-7569221)
chr6 (123-160)||(8629694-8629731)
chr6 (240-285)||(9027186-9027231)
chr6 (240-285)||(9617442-9617487)
chr6 (111-156)||(24438284-24438329)
chr6 (240-285)||(30866150-30866195)
chr6 (123-160)||(32409177-32409213)
chr6 (120-157)||(35110077-35110114)
chr6 (111-151)||(1794958-1794998)
chr6 (111-147)||(3487945-3487981)
chr6 (116-156)||(6503279-6503319)
chr6 (115-159)||(6814479-6814523)
chr6 (111-159)||(8138457-8138505)
chr6 (241-285)||(9629392-9629436)
chr6 (233-265)||(13211307-13211339)
chr6 (113-157)||(15187079-15187123)
chr6 (113-157)||(15473483-15473527)
chr6 (116-168)||(17177936-17177988)
chr6 (111-171)||(27907938-27907998)
chr6 (112-156)||(29680603-29680647)
[»] chr1 (48 HSPs)
chr1 (240-293)||(1864878-1864931)
chr1 (111-168)||(41974775-41974832)
chr1 (111-171)||(3777732-3777792)
chr1 (111-171)||(29739351-29739411)
chr1 (116-168)||(34595891-34595943)
chr1 (123-176)||(7925390-7925442)
chr1 (111-156)||(16967196-16967241)
chr1 (240-284)||(7918218-7918262)
chr1 (123-171)||(34521177-34521225)
chr1 (242-289)||(2445880-2445927)
chr1 (92-168)||(30678803-30678881)
chr1 (93-157)||(33153881-33153947)
chr1 (242-285)||(44482240-44482283)
chr1 (111-178)||(47719087-47719154)
chr1 (121-168)||(49431983-49432030)
chr1 (123-161)||(7996686-7996724)
chr1 (123-157)||(13401623-13401657)
chr1 (242-284)||(25361896-25361938)
chr1 (120-162)||(28979272-28979314)
chr1 (238-284)||(40747780-40747826)
chr1 (111-157)||(49868025-49868071)
chr1 (238-291)||(373053-373106)
chr1 (123-160)||(4806793-4806830)
chr1 (123-156)||(16966974-16967007)
chr1 (111-156)||(22388177-22388222)
chr1 (242-283)||(25098563-25098604)
chr1 (112-177)||(33175276-33175341)
chr1 (111-152)||(34808569-34808610)
chr1 (240-285)||(36878469-36878514)
chr1 (240-281)||(40181879-40181920)
chr1 (238-283)||(42325566-42325611)
chr1 (111-144)||(42416817-42416850)
chr1 (118-171)||(47417804-47417857)
chr1 (240-284)||(10233261-10233305)
chr1 (111-143)||(10843336-10843368)
chr1 (111-143)||(13794523-13794555)
chr1 (111-167)||(15670633-15670689)
chr1 (242-282)||(19324572-19324612)
chr1 (123-155)||(21341210-21341242)
chr1 (111-151)||(24124837-24124877)
chr1 (238-286)||(24176372-24176420)
chr1 (123-171)||(27533269-27533317)
chr1 (240-284)||(34712390-34712434)
chr1 (111-155)||(35011407-35011451)
chr1 (111-155)||(35632913-35632957)
chr1 (123-159)||(42860133-42860169)
chr1 (123-159)||(45652118-45652154)
chr1 (116-168)||(45677304-45677356)
[»] chr5 (40 HSPs)
chr5 (111-171)||(29695029-29695089)
chr5 (209-283)||(38749571-38749645)
chr5 (116-157)||(22745908-22745949)
chr5 (119-168)||(32565546-32565595)
chr5 (123-176)||(35413274-35413327)
chr5 (205-285)||(37472603-37472681)
chr5 (240-289)||(41091259-41091308)
chr5 (116-152)||(13547466-13547502)
chr5 (123-159)||(21657397-21657433)
chr5 (134-178)||(22434447-22434491)
chr5 (116-156)||(29904440-29904480)
chr5 (116-155)||(3052200-3052239)
chr5 (240-283)||(6471897-6471940)
chr5 (116-171)||(18557873-18557928)
chr5 (240-291)||(23015989-23016040)
chr5 (111-157)||(5614779-5614825)
chr5 (239-285)||(25863211-25863257)
chr5 (126-168)||(37614417-37614459)
chr5 (118-156)||(39963514-39963552)
chr5 (111-161)||(42964523-42964573)
chr5 (123-160)||(3052305-3052342)
chr5 (240-285)||(3966511-3966556)
chr5 (111-156)||(22394049-22394094)
chr5 (123-176)||(22522783-22522836)
chr5 (111-144)||(23118065-23118098)
chr5 (240-285)||(28588680-28588725)
chr5 (240-285)||(30502394-30502439)
chr5 (240-285)||(30542737-30542782)
chr5 (240-285)||(31264446-31264491)
chr5 (118-171)||(31545892-31545945)
chr5 (240-285)||(36838551-36838596)
chr5 (111-160)||(40445997-40446046)
chr5 (111-143)||(4432130-4432162)
chr5 (123-159)||(4763185-4763221)
chr5 (123-171)||(26655490-26655538)
chr5 (123-171)||(26927075-26927123)
chr5 (111-155)||(27679512-27679556)
chr5 (112-156)||(31305888-31305932)
chr5 (112-168)||(40715939-40715995)
chr5 (230-282)||(41600896-41600948)
[»] chr3 (35 HSPs)
chr3 (237-285)||(20691324-20691372)
chr3 (111-157)||(2563943-2563989)
chr3 (111-176)||(10926483-10926548)
chr3 (240-289)||(16192752-16192801)
chr3 (90-152)||(53633623-53633687)
chr3 (240-292)||(29508452-29508504)
chr3 (111-155)||(47099038-47099082)
chr3 (123-171)||(52453244-52453292)
chr3 (123-178)||(913580-913635)
chr3 (238-285)||(24205047-24205094)
chr3 (239-285)||(3730171-3730217)
chr3 (111-157)||(21160066-21160112)
chr3 (123-157)||(28965778-28965812)
chr3 (93-176)||(38130941-38131026)
chr3 (111-157)||(55126020-55126066)
chr3 (111-152)||(5117222-5117263)
chr3 (120-157)||(7859493-7859530)
chr3 (240-285)||(7928458-7928503)
chr3 (240-285)||(8039841-8039886)
chr3 (111-160)||(21245807-21245856)
chr3 (123-176)||(29631212-29631265)
chr3 (122-171)||(38602983-38603032)
chr3 (123-168)||(43630408-43630453)
chr3 (111-156)||(47377351-47377396)
chr3 (121-178)||(48417848-48417904)
chr3 (233-277)||(11251979-11252023)
chr3 (231-287)||(11658814-11658870)
chr3 (241-293)||(20503474-20503526)
chr3 (238-274)||(21149073-21149109)
chr3 (121-157)||(31463508-31463544)
chr3 (240-284)||(32804547-32804591)
chr3 (128-168)||(33634529-33634569)
chr3 (111-155)||(48315027-48315071)
chr3 (240-284)||(49505161-49505205)
chr3 (111-167)||(52119390-52119446)
[»] scaffold1694 (1 HSPs)
scaffold1694 (111-169)||(169-227)
[»] scaffold0027 (1 HSPs)
scaffold0027 (111-171)||(61557-61617)
[»] scaffold0118 (1 HSPs)
scaffold0118 (123-161)||(40024-40062)
[»] scaffold0011 (1 HSPs)
scaffold0011 (123-157)||(189973-190007)
[»] scaffold0204 (1 HSPs)
scaffold0204 (115-152)||(16169-16206)
[»] scaffold0123 (1 HSPs)
scaffold0123 (244-285)||(44531-44572)
[»] scaffold0036 (1 HSPs)
scaffold0036 (240-285)||(9753-9798)
[»] scaffold0022 (1 HSPs)
scaffold0022 (240-289)||(90851-90900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (240-285)||(135318-135363)
[»] scaffold0016 (1 HSPs)
scaffold0016 (123-176)||(204616-204669)
[»] scaffold0734 (1 HSPs)
scaffold0734 (116-176)||(4323-4383)
[»] scaffold0044 (1 HSPs)
scaffold0044 (241-285)||(53189-53233)
[»] scaffold0008 (1 HSPs)
scaffold0008 (224-284)||(263379-263439)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 27363120 - 27363432
Alignment:
Q  1 tgatttactctttttctactatgatttactcctttttacatgtaatggattgatg-------------taatatttcagtaaataataagagcagcaaga 87  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||||||              |||||||| ||| |||||||||||||||||||    
T  27363120 tgatttactctttttatattatgatttcctcctttttacatgtaatggattgatcgaagaaaagtatctaatattttagtgaataataagagcagcaaga 27363219  T
Q  88 aaattgtcctagtgagcttaattgttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaagaccaacaaga 187  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27363220 aaattgtcctagtgagcttagttgttgataagga-aatgcataatatacgtaaggttcgaggttcaaacctcggctaccaccaaaaaaagaccaacaaga 27363318  T
Q  188 aaattatagtgcacctaactatgaagcacaaactcagacatatcaaca-ttgataataatttgagacaatgacataattcagtctaattatatgtgtcga 286  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  27363319 aaattatagtgcacttaactatgaagcacaaactcagacatatcaacatttgataataatttgagacaatggcataattcagtctaattatatgtgttga 27363418  T
Q  287 tgttggatatgata 300  Q
    ||||||||||||||    
T  27363419 tgttggatatgata 27363432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 34000276 - 34000320
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  34000276 gttgataaggataatgcataatatatgtaaggttcggggttcaaa 34000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 12278834 - 12278888
Alignment:
Q  231 caacattgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  12278834 caacactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 42227847 - 42227807
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  42227847 taaggacaatgcataatatatgtaaggttcgaggttcaaac 42227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 11665491 - 11665442
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||| | ||| ||||||||||||||||||||| ||||||||||    
T  11665491 taataatttgaaaaaatcacataattcagtctaattataagtgtcgatgt 11665442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 45425467 - 45425532
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||||||| || ||||||||||||||| |||||||| ||||| || | |||| |||||||||||||    
T  45425467 gttgataaagacaatgcataatatatgcaaggttcggggttcgaatcccggccaccaccaacaaaa 45425532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 37451284 - 37451252
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    |||||||||||||||||||||||||||||||||    
T  37451284 gttgataaggataatgcataatatatgtaaggt 37451252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 39926585 - 39926537
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    ||||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  39926585 gttgataaggacaatgcataatatatgcaatgttcggggttcaaacctc 39926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 18233651 - 18233604
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||| |||||||||| |||||||||||||||| |||||||| ||||||    
T  18233651 gatagtaatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 27833448 - 27833381
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    |||| |||||| ||||||||||||||||||||| || |||||||||| || | |||||| | ||||||    
T  27833448 gttggtaaggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccaccgaaaaaaga 27833381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 38134459 - 38134412
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| |||||||||||||| | |||| ||||||||||    
T  38134459 gataataatttgagaaaatgacataattcaatgtaatcatatgtgtcg 38134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 41237953 - 41237906
Alignment:
Q  129 taatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||| |||||||||||||||||||||| | |||||||| ||||    
T  41237953 taatatatgcaaggttcgaggttcaaacctcgaccaccaccaaaaaaa 41237906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 43249999 - 43250046
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  43249999 gataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 19930991 - 19930945
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcgat 287  Q
    |||||||||| | |||||||||||||| | |||||||||||||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatgtgtcgat 19930945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 45151391 - 45151437
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| | |||||||||||||||||||||||| | ||||||||||    
T  45151391 gttgataggaataatgcataatatatgtaaggtttggggttcaaacc 45151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 2512338 - 2512383
Alignment:
Q  126 gcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||||||||| ||||| ||||||||||||| |||| ||||||||    
T  2512338 gcataatatatgcaaggtacgaggttcaaaccccggccaccaccaa 2512383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 3721101 - 3721146
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcg 3721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 5835255 - 5835300
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||| ||||||| ||| |||||||||||| |||||||||||||||    
T  5835255 taatagtttgagaaaataacataattcagtgtaattatatgtgtcg 5835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 6630963 - 6630914
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| | | || ||||||||| |||||||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgt 6630914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 7328742 - 7328697
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 10362351 - 10362314
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgag 148  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  10362351 gttgataaggagaatgcataatatatgcaaggttcgag 10362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 16341501 - 16341546
Alignment:
Q  237 tgataataatttgagacaatgacataattcagtctaattatatgtg 282  Q
    |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  16341501 tgataataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 19206058 - 19206103
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||| | |||||||||||||||    
T  19206058 taataatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 20549799 - 20549844
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 23221418 - 23221451
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||||| |||||||||    
T  23221418 aatgcataatatatgtaaggttcgtggttcaaac 23221451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 23849513 - 23849464
Alignment:
Q  236 ttgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| ||  |||||||||||| |||||||||||||||    
T  23849513 ttgataataatttaagaaaaacacataattcagtataattatatgtgtcg 23849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 26733312 - 26733357
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||||||    
T  26733312 taataatttgacaaaatcacataattcagtctaattaaatgtgtcg 26733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 27732290 - 27732245
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 34568380 - 34568347
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggtt 144  Q
    ||||||||||||||||||||||||||| ||||||    
T  34568380 gttgataaggataatgcataatatatgcaaggtt 34568347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 40449359 - 40449330
Alignment:
Q  127 cataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||||||||||||||||||||    
T  40449359 cataatatatgtaaggttcgaggttcaaac 40449330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 45272377 - 45272336
Alignment:
Q  113 tgataaggataatgcataatatatgtaaggttcgaggttcaa 154  Q
    ||||||||| |||| || ||||||||||||||||||||||||    
T  45272377 tgataaggacaatgtatgatatatgtaaggttcgaggttcaa 45272336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 3584218 - 3584278
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| |||||| ||||||||||||||| ||||| |||| |||||||| || | ||||||||    
T  3584218 gttggtaaggacaatgcataatatatgcaaggtacgagattcaaaccccgaccaccaccaa 3584278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 8237701 - 8237614
Alignment:
Q  91 ttgtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||| ||||||||| ||  |||| |||||| ||||||||||||||  || || ||||||||||||| |||| |||| ||| ||||    
T  8237701 ttgtcctcgtgagcttagttctgttggtaaggacaatgcataatatatacaaagtccgaggttcaaaccccggccaccaacaaaaaaa 8237614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 15902829 - 15902881
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgtgtcgatgttg 291  Q
    |||||||||||| | ||| |||||||| ||| ||||||||||||||| |||||    
T  15902829 ataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttg 15902881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 17307904 - 17307944
Alignment:
Q  243 taatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgt 17307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 17851439 - 17851483
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 21322189 - 21322249
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| ||||||||||||||||| |||| ||||| |  |||||||||| |||| ||||||||    
T  21322189 gttggtaaggataatgcataatgtatgcaaggtccagggttcaaaccccggccaccaccaa 21322249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  245 atttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 22868050 - 22868094
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||| ||||| ||| |||||||||||| ||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 32308128 - 32308172
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  32308128 taataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 34897536 - 34897568
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaa 155  Q
    |||||||||||||||||||||| ||||||||||    
T  34897536 aatgcataatatatgtaaggtttgaggttcaaa 34897568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 39106710 - 39106666
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||| | ||||||||||| ||||| |||||||||||||||||    
T  39106710 gttgatatgaataatgcataaaatatgcaaggttcgaggttcaaa 39106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 40854936 - 40854968
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggtt 144  Q
    |||||||||| ||||||||||||||||||||||    
T  40854936 ttgataaggaaaatgcataatatatgtaaggtt 40854968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 44651620 - 44651664
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||    
T  44651620 ttgataatgacaatgcataatatatgcaaggttcgaagttcaaac 44651664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 44868190 - 44868158
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||||||||||||||| |||||||||||    
T  44868190 aatgcataatatatgtaaggtccgaggttcaaa 44868158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 13000699 - 13000756
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13000699 gttggtaaagataatgcataatatatgtaaggtccgaggtttaaacctcggctaccac 13000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 5168626 - 5168566
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||| || ||||||||||    
T  5168626 gttgatagggataatgcataatatatgcaaggttcggggttcaaaccccgactaccaccaa 5168566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 40967418 - 40967369
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  40967418 gttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcg 40967369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 4229460 - 4229408
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgtgtcgatgttg 291  Q
    |||||||||| ||| |||||||||||||||| |||| ||||||||||||||||    
T  4229460 ataataatttaagagaatgacataattcagtgtaatcatatgtgtcgatgttg 4229408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 21497693 - 21497738
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||    
T  21497693 aatgcataatatatgcaaggttcgaggtttaaacctcggccaccac 21497738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 37411295 - 37411246
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| |||||||||||| | |||||||||||||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgt 37411246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 24011037 - 24011089
Alignment:
Q  233 acattgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||||||||||| |||||||||||| ||| |||| ||| ||||||    
T  24011037 acattgataataatttgagaaaatgacataatttagtgtaatcataggtgtcg 24011089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27889315 - 27889363
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||| |||||||||||| |||||||||||| | |||||||||||    
T  27889315 aatgcataaaatatgtaaggtttgaggttcaaaccccagctaccaccaa 27889363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 30243276 - 30243324
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||  |||||||| ||||||||||||||| ||||||||    
T  30243276 aatgcataatatatacaaggttcggggttcaaacctcggccaccaccaa 30243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 41543018 - 41542974
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||    
T  41543018 aatgcataatatatgtaaggttcggggtttaaacctcggccacca 41542974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 5028870 - 5028921
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggc 162  Q
    |||||| |||| |||||||||||||||||||||| | |||||||||| ||||    
T  5028870 gttgattaggacaatgcataatatatgtaaggtttggggttcaaaccccggc 5028921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 10535812 - 10535765
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  10535812 gataataatttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 21616770 - 21616813
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  21616770 taataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 12413507 - 12413553
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  12413507 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaacc 12413553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 12425567 - 12425613
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  12425567 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaacc 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 18570978 - 18571024
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||||| |||||||||||||| | |||| |||||||||    
T  18570978 gataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 24581052 - 24581018
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||||||| |||||||||||||||||||    
T  24581052 aatgcataatatatgcaaggttcgaggttcaaacc 24581018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 28202311 - 28202357
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| ||| ||||||||||||||||||||| ||| |||||||||    
T  28202311 gttgatagggacaatgcataatatatgtaaggtccgaagttcaaacc 28202357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 32407603 - 32407553
Alignment:
Q  118 aggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||| ||| |||||||||||||||||| |||||||||||||| || |||||    
T  32407603 aggacaatacataatatatgtaaggtttgaggttcaaacctcagccaccac 32407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 35281250 - 35281212
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  35281250 ggataatgtataatatatgcaaggttcgaggttcaaacc 35281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 44488057 - 44488011
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||| |||||| ||||||||||||||||||||||||  |||||||||    
T  44488057 gttggtaaggacaatgcataatatatgtaaggttcggagttcaaacc 44488011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 3196586 - 3196623
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  3196586 aatgcataatatatgtaaggttcgagattcaaatctcg 3196623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 5367200 - 5367245
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||  ||| |||||||||||| |||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 12668474 - 12668429
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| | |||||||||||||||| |||||||| ||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 14735928 - 14735895
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||| ||||||||||||||||||||||||    
T  14735928 aatgcataaaatatgtaaggttcgaggttcaaac 14735895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 23718034 - 23718079
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| | | |||||||||||| |||||||||||||||    
T  23718034 taataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 24105706 - 24105751
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| | | |||||||||||| |||||||||||||||    
T  24105706 taataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29544653 - 29544706
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  29544653 aatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaa 29544706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 30045479 - 30045524
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||  |||||||||| ||||||||||||| |||||    
T  30045479 aatgcataatatatacaaggttcgagattcaaacctcggccaccac 30045524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 30050642 - 30050687
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||  |||||||||| ||||||||||||| |||||    
T  30050642 aatgcataatatatacaaggttcgagattcaaacctcggccaccac 30050687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 30141686 - 30141731
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||  |||||||||| ||||||||||||| |||||    
T  30141686 aatgcataatatatacaaggttcgagattcaaacctcggccaccac 30141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 31837975 - 31837934
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||||||| ||||||||||||||||||| | |||||||||||    
T  31837975 ggataatgtataatatatgtaaggttcgggattcaaacctcg 31837934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 32957578 - 32957533
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||    
T  32957578 aatgcataatatatgtaaggtttggggtttaaacctcggccaccac 32957533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 33401623 - 33401574
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    ||||||| ||||||||||| ||||||| ||||| ||||||||||| ||||    
T  33401623 gttgatatggataatgcatgatatatgcaaggtacgaggttcaaatctcg 33401574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 34376900 - 34376945
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  34376900 gttggtaaggatattgcataaaatatgcaaggttcgaggttcaaac 34376945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 35449512 - 35449565
Alignment:
Q  231 caacattgataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||| || ||||||||||||| ||| ||| |||||||| ||||||||||||||    
T  35449512 caacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 41939147 - 41939110
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  41939147 ggataatgcataatatatgtaaggtttgagattcaaac 41939110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 44860328 - 44860373
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| |||  ||||||||||| |||||||||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 10332322 - 10332278
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  10332322 gttgataaggacaatgcataatatatggaaggtcggaggttcaaa 10332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 10735865 - 10735813
Alignment:
Q  124 atgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  10735865 atgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaa 10735813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 12126899 - 12126939
Alignment:
Q  127 cataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||||||||||||||||| |||||||||||| ||| |||||    
T  12126899 cataatatatgtaaggtttgaggttcaaaccccggttacca 12126939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 14414922 - 14414894
Alignment:
Q  128 ataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||||||||||    
T  14414922 ataatatatgtaaggttcgaggttcaaac 14414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 20120768 - 20120724
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    |||| |||||| ||||||||||||||| |||||||| ||||||||    
T  20120768 gttggtaaggacaatgcataatatatgcaaggttcggggttcaaa 20120724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27848184 - 27848232
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| ||||| || |||||||||| |||| ||||||||    
T  27848184 aatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaa 27848232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 32844877 - 32844909
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    |||||||| ||||||||||||||||||||||||    
T  32844877 gttgataatgataatgcataatatatgtaaggt 32844909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 35065658 - 35065618
Alignment:
Q  128 ataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  35065658 ataatatatgcaaggttcgaggttcaaaccccggccaccac 35065618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 36264547 - 36264480
Alignment:
Q  92 tgtcctagtgagcttaattg--ttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||| ||||||||||||   ||| || ||||||||||||||||||| || ||||| ||||||||||    
T  36264547 tgtccttgtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaaacc 36264480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 39279683 - 39279735
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttgg 292  Q
    ||||||| ||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttgg 39279735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 40295493 - 40295449
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||||||||| |||| ||| ||||||||||||||| |||||||||    
T  40295493 aatgcataatgtatgcaagattcgaggttcaaaccccggctacca 40295449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 42451452 - 42451492
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  42451452 taaggacactgcataatatatgtaaggtttgaggttcaaac 42451492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 44868433 - 44868465
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    ||||||||||| |||||||||||||||||||||    
T  44868433 gttgataaggacaatgcataatatatgtaaggt 44868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 9783913 - 9783973
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||| ||| |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  9783913 gttgatatggacaatgcataatatatgtaaggtctgaggttcaaacctcggccaccaccaa 9783973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 46434807 - 46434762
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||    
T  46434807 gttgataaggacaatgcataatatatgtaaggtttgaggttcaaac 46434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 56096218 - 56096263
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||    
T  56096218 gttgataaggacaatgcataatatatgtaaggttcgtggttcaaac 56096263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 30135134 - 30135200
Alignment:
Q  93 gtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||| |||||||||| |  |||||||||||||||||||||||||||| || | |||||||||||||    
T  30135134 gtccttgtgagcttaactcagttgataaggataatgcataatatatgtcagatccgaggttcaaacc 30135200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 39842059 - 39842016
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaa 154  Q
    ||||||||||| |||||||||||||||||||||| |||||||||    
T  39842059 gttgataaggacaatgcataatatatgtaaggtttgaggttcaa 39842016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 47704606 - 47704653
Alignment:
Q  121 ataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||| |||||||||||||||||||||||| |||||||||| |||||    
T  47704606 ataatgtataatatatgtaaggttcgaggtttaaacctcggcaaccac 47704653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 32910526 - 32910596
Alignment:
Q  207 tatgaagcacaaactcagacatatcaacattgataataatttgagacaatgacataattcagtctaattat 277  Q
    |||||||||| ||| | |||||| | |||  ||||||||||||||| |||||||||||||||| |||||||    
T  32910526 tatgaagcacgaacaccgacataccgacacggataataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 7230294 - 7230351
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||| |||||| ||||||||||||||| ||||| || ||||||||||||||| |||||    
T  7230294 gttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 37735783 - 37735852
Alignment:
Q  92 tgtcctagtgagcttaatt-gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||||| |||||||||| | |||||  |||| |||||||||||||||||||||  |||||||||||||||    
T  37735783 tgtcctcgtgagcttaactcgttgacgaggacaatgcataatatatgtaaggtctgaggttcaaacctcg 37735852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 56551639 - 56551582
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||| |||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||    
T  56551639 gttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 14202547 - 14202480
Alignment:
Q  92 tgtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||| |||||||||| |  ||||||  ||||||||||||||||||||||||| || ||||||||||    
T  14202547 tgtcctcgtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaaacc 14202480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 34042266 - 34042314
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| |||||||| ||||||||||||| | ||||||||    
T  34042266 aatgcataatatatgcaaggttcggggttcaaacctcgaccaccaccaa 34042314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 34968045 - 34968005
Alignment:
Q  122 taatgcataatatatgtaaggttcgaggttcaaacctcggc 162  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  34968045 taatgcataatatatgtaaggtttgaggttcgaacctcggc 34968005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 54677240 - 54677284
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||    
T  54677240 ttgatatggacaatgcataatatatgtaaggttcgagattcaaac 54677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 11300689 - 11300740
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggc 162  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||| ||||    
T  11300689 gttgatatggattatgcataacatatgtaaggtccgaggttcaaaccccggc 11300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 14465347 - 14465300
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| |||||||||||||| | |||| ||||||||||    
T  14465347 gataataatttgagaaaatgacataattcaatttaatcatatgtgtcg 14465300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 24343513 - 24343560
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  24343513 gataataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 36479004 - 36479051
Alignment:
Q  110 tgttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||| || ||| |||||||||||||||||||||||||||||| ||||    
T  36479004 tgttggtatggacaatgcataatatatgtaaggttcgaggttcgaacc 36479051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 49385348 - 49385293
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||| ||||||||||||||||||| | ||  |||||||||||||| ||||||||    
T  49385348 taaggacaatgcataatatatgtaagatccggagttcaaacctcggccaccaccaa 49385293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 5654660 - 5654591
Alignment:
Q  222 cagacatatcaacattgataataatttgagacaatgacataattcagtctaattata--tgtgtcgatgt 289  Q
    ||||||| || ||| |||||||||||||||| |||||||||||||| | |||| |||  |||||||||||    
T  5654660 cagacatgtcgacactgataataatttgagaaaatgacataattcaatgtaatcatacgtgtgtcgatgt 5654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 11110212 - 11110262
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcgatgttg 291  Q
    |||||||||||| |||||||||||||  | |||| ||||||||||||||||    
T  11110212 aataatttgagaaaatgacataattcgatgtaatcatatgtgtcgatgttg 11110262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 18513294 - 18513248
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||||| |||||||||||||| | |||| |||||||||    
T  18513294 gataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 22040664 - 22040710
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| ||| ||||||||||||||| |||||||| ||||||||||    
T  22040664 gttgatatggacaatgcataatatatgcaaggttcggggttcaaacc 22040710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 22440651 - 22440609
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtg 282  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 32923238 - 32923204
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  32923238 aatgcataatatatgtaaggttcggggttcaaacc 32923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 43034409 - 43034324
Alignment:
Q  93 gtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||| |||||||||| |  |||| || ||| ||||||||||||||| |||||  |||||||||||| |||| |||||||| ||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccaccaaaaaaa 43034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 47016623 - 47016677
Alignment:
Q  102 agcttaattgttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||| ||| |||||||| || ||||||||||||||||||||||| ||| ||||||    
T  47016623 agctcaatagttgataaagacaatgcataatatatgtaaggttctaggatcaaac 47016677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 50650974 - 50650940
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttc 145  Q
    ||||||||||| |||||||||||||||||||||||    
T  50650974 gttgataaggacaatgcataatatatgtaaggttc 50650940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgt 281  Q
    ||||||||||||| ||| |||||||||||| |||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 1701622 - 1701671
Alignment:
Q  111 gttgataaggataa-tgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    |||||||||||||| ||||||||||||| ||||| |||||||| ||||||    
T  1701622 gttgataaggataaatgcataatatatgcaaggtccgaggttcgaacctc 1701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 4911647 - 4911603
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||    
T  4911647 gttgataaggata-tgcataatatatgtaaggtctgaggttcaaac 4911603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 10546138 - 10546183
Alignment:
Q  222 cagacatatcaacattgataataatttgagacaatgacataattca 267  Q
    ||||||| || ||| |||||||||||||||| ||||||||||||||    
T  10546138 cagacatgtcgacaatgataataatttgagaaaatgacataattca 10546183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 10564496 - 10564455
Alignment:
Q  127 cataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||  |||||||||||| ||||||||||    
T  10564496 cataatatatgtaaggtctgaggttcaaaccccggctaccac 10564455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 12058338 - 12058379
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||| ||||||| |||||| ||||    
T  12058338 taaggataatgcataatatatgcaaggttcaaggttcgaacc 12058379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 20743331 - 20743286
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||||    
T  20743331 gataataatttgagaaaatgacataattcagtgtaatcataggtgt 20743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 22411790 - 22411823
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||||| |||||||||    
T  22411790 aatgcataatatatgtaaggttcggggttcaaac 22411823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 23160066 - 23160099
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||||||||||| ||||||||||||    
T  23160066 aatgcataatatatgtaaggtccgaggttcaaac 23160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 29568605 - 29568646
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||| ||||||||||||||||||||| |||||||| ||||    
T  29568605 taaggacaatgcataatatatgtaaggtccgaggttcgaacc 29568646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 31243600 - 31243555
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    |||||||||||||| |||||||||||||||| |||| ||| |||||    
T  31243600 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc 31243555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 32006522 - 32006559
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  32006522 ggataatgcataatatatgtaaagttcggggttcaaac 32006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 36071158 - 36071199
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    |||| |||||| |||||||||||||||||||||||| |||||    
T  36071158 gttggtaaggacaatgcataatatatgtaaggttcggggttc 36071199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 40613458 - 40613503
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||| ||||||| ||| |||||||||||| |||||||||||||||    
T  40613458 taatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 54587914 - 54587947
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggtt 144  Q
    ||||||| ||||||||||||||||||||||||||    
T  54587914 gttgatatggataatgcataatatatgtaaggtt 54587947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 3634953 - 3634909
Alignment:
Q  236 ttgataataatttgagacaatgacataattcagtctaattatatg 280  Q
    ||||||||||||||||| ||||||| |||| | ||||||||||||    
T  3634953 ttgataataatttgagaaaatgacaaaatttaatctaattatatg 3634909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 6460233 - 6460173
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||| |||||| |||||||||| ||||||  ||||| ||||||||||||||| ||| ||||    
T  6460233 taagaataatgtataatatatgcaaggttgtaggtttaaacctcggctaccatcaaaaaaa 6460173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgt 281  Q
    |||||||||||| ||| |||||||||||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 19230367 - 19230315
Alignment:
Q  233 acattgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||| ||||||||||||||| ||| |||||||||| | |||||||| ||||||    
T  19230367 acatagataataatttgagaaaataacataattcaatgtaattataggtgtcg 19230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 28311495 - 28311531
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttc 152  Q
    ||||||||||||||||||||||||||||  |||||||    
T  28311495 taaggataatgcataatatatgtaaggtgtgaggttc 28311531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 28435283 - 28435235
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| |||||||| |||||||||| | || ||||||||    
T  28435283 aatgcataatatatgcaaggttcggggttcaaaccccagccaccaccaa 28435235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 37921765 - 37921817
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||| ||||||||||||||| ||||| || | |||||||| ||||||||||    
T  37921765 taaggacaatgcataatatatgcaaggtccgggattcaaaccccggctaccac 37921817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 40699981 - 40699933
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    |||||||||||| |||||||||||| ||  |||| ||||||||||||||    
T  40699981 aataatttgagaaaatgacataatttagcttaatcatatgtgtcgatgt 40699933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 48159703 - 48159735
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||||||||||||||||||| |||||||    
T  48159703 aatgcataatatatgtaaggttcgaagttcaaa 48159735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 13357508 - 13357428
Alignment:
Q  93 gtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||| |||||||||| |  |||| || ||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacctcggccaccaccaa 13357428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 34897093 - 34897142
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgt 34897142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 7658471 - 7658526
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttggata 295  Q
    ||||||||||||| ||| |||||||||||| ||||||||| ||||| |||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattatatttgtcggtgttggata 7658526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 18959171 - 18959209
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  18959171 ggataatgcataatatatgcaaggttcgaggttcaaacc 18959209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 42208516 - 42208466
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcgg 161  Q
    |||| |||||| ||||||||||||||| ||||| |||||||||||||||||    
T  42208516 gttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacctcgg 42208466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 3650546 - 3650591
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||    
T  3650546 aatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 24362253 - 24362204
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||| ||||    
T  24362253 taataatttgagagaatcacataattcagtgtaattatatgtgtcaatgt 24362204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 1230696 - 1230648
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||    
T  1230696 aatgcataatatatgtaaggtttgaggttcaaaactcagccaccaccaa 1230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 8717510 - 8717466
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||    
T  8717510 aatgcataatatatgcaaggttcggggttcaaacctcggccacca 8717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 19260614 - 19260566
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||||||||| || |||||||||| |||| ||||||||    
T  19260614 aatgcataatatatgtaaggtccggggttcaaaccccggccaccaccaa 19260566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 19701391 - 19701359
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    |||||||||||||||||||||||||||||||||    
T  19701391 gttgataaggataatgcataatatatgtaaggt 19701359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 32115441 - 32115405
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32115441 aatgcataatatatgtaaggttcggggttcaaacctc 32115405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 4786389 - 4786334
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttggata 295  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||||| ||| |||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggata 4786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 13449831 - 13449788
Alignment:
Q  124 atgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||||||||||||| || ||||||||||||||||||||| ||||    
T  13449831 atgcataatatatgcaaagttcgaggttcaaacctcggccacca 13449788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 33382072 - 33382025
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  33382072 gataataatttaagaaaatgacataattcagagtaattatatgtgtcg 33382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 44067522 - 44067569
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  44067522 gataataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 3025553 - 3025603
Alignment:
Q  234 cattgataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||| ||||||||||||| ||| |||||||||||| |||||||| |||||    
T  3025553 cattgctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 25136876 - 25136826
Alignment:
Q  126 gcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||||| ||||| ||||| |||||||||||||||||| |||||||| ||||    
T  25136876 gcataaaatatgcaaggtccgaggttcaaacctcggccaccaccaaaaaaa 25136826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 28439973 - 28440019
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||| ||||||||||||||||||||||||  | ||||||||||    
T  28439973 gttgataaagataatgcataatatatgtaaggtctggggttcaaacc 28440019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 34201098 - 34201056
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgt 281  Q
    |||||||||||||| |||||||||||||| | |||||||||||    
T  34201098 ataataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 45049597 - 45049635
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  45049597 ggataatgcataaaatatgtaaggttcggggttcaaacc 45049635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 4611542 - 4611583
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgt 281  Q
    ||||||||||||| ||| |||||||||||| |||||||||||    
T  4611542 taataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 5179807 - 5179864
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||| |||||| ||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  5179807 gttggtaaggacaatgcataatatatacaaggttcggggttcaaacttcggccaccac 5179864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 9241041 - 9241086
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||||    
T  9241041 aatgcataatatatgtaaggtccgatgttcaaaccccggccaccac 9241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 10320510 - 10320551
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    ||||||||| |||||||||||||||||||||||  |||||||    
T  10320510 gttgataagaataatgcataatatatgtaaggtatgaggttc 10320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| | ||| |||||||||||| |||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 12748927 - 12748980
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  12748927 aatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaa 12748980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 13844647 - 13844602
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 14134707 - 14134752
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcg 14134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 30874734 - 30874782
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    ||||| ||||| |||||||||||||||||||| ||| |||||||||||||    
T  30874734 gttgacaaggacaatgcataatatatgtaagg-tcggggttcaaacctcg 30874782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 31236628 - 31236583
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||| | |||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 32286397 - 32286344
Alignment:
Q  125 tgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    ||||||||||||| ||| |||| |||||||||| |||| |||||||| ||||||    
T  32286397 tgcataatatatgcaagattcggggttcaaaccccggccaccaccaaaaaaaga 32286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 1639483 - 1639551
Alignment:
Q  225 acatatcaacattgataataatttgagacaatgacataattcagtctaattatatgtgtcgatgttgga 293  Q
    |||| |||||| | |||||| ||||||| |||||||||||||| | |||| |  |||||||||||||||    
T  1639483 acatgtcaacaataataatattttgagaaaatgacataattcaatgtaataacgtgtgtcgatgttgga 1639551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 6471537 - 6471585
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| || ||||| |||||||||| |||| ||||||||    
T  6471537 aatgcataatatatgcaatgttcggggttcaaaccccggccaccaccaa 6471585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||||| | ||||||||||||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 30068081 - 30068045
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaat 274  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  30068081 gataataatttgagaaaatgacataattcagtataat 30068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 32051567 - 32051519
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| ||||| || |||||||||| |||| ||||||||    
T  32051567 aatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaa 32051519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 10018420 - 10018473
Alignment:
Q  118 aggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||||||||||||||||| |||||||||  |||| ||||||||    
T  10018420 aggataatgcataatatatgtaaggttcggggttcaaactccggccaccaccaa 10018473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 33824895 - 33824951
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    ||||||||||| ||||||||||||||| ||||| || ||||||||||||||| ||||    
T  33824895 gttgataaggacaatgcataatatatgcaaggtccggggttcaaacctcggccacca 33824951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 24623364 - 24623318
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  24623364 gttgatatggacaatgcataatatatgtaaggttcggggttcaaacc 24623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 1989078 - 1989041
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1989078 aatgcataatatatgtaaggtttgaggttcaaacctcg 1989041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 2105931 - 2105964
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||||||||||||||||||||||||    
T  2105931 aatgcataatatatgtaaggttcgaggttcaaac 2105964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 2617240 - 2617195
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  2617240 aatgcataatatatgtaaggtttgaggtttaaacctcggccaccac 2617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 4826316 - 4826349
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||||||||||||||||||||||||    
T  4826316 aatgcataatatatgtaaggttcgaggttcaaac 4826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 7265644 - 7265599
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 8931649 - 8931604
Alignment:
Q  244 aatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||    
T  8931649 aatttgagaaaataacataattcagtataattatatgtgtcgatgt 8931604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 9025545 - 9025500
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 9195805 - 9195760
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 13851744 - 13851793
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  13851744 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 13851793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 21142120 - 21142173
Alignment:
Q  234 cattgataataatttgagacaatgacataattcagtctaattatatgtgtcgat 287  Q
    ||||| ||||||||||||| ||| | ||||||||||||| ||||||||||||||    
T  21142120 cattgttaataatttgagaaaatcatataattcagtctagttatatgtgtcgat 21142173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 26562701 - 26562746
Alignment:
Q  244 aatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgt 26562746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 16390455 - 16390499
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  16390455 aatgcataatatatgtaaggtccggggttcaaacctcggccacca 16390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 19040360 - 19040404
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 24248179 - 24248239
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| |||||||||| ||||||||||||||||| || ||||||| ||||| | ||||||||    
T  24248179 gttggtaaggataatacataatatatgtaaggtccggggttcaaccctcgaccaccaccaa 24248239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 12086398 - 12086351
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  12086398 gataataatttgagataatgacataattcagtttaatcataggtgtcg 12086351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 12459778 - 12459743
Alignment:
Q  121 ataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||||||||||||||||||||||| |||||||||    
T  12459778 ataatgcataatatatgtaaggttcggggttcaaac 12459743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 23635749 - 23635694
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    ||||||||||||||||||||||||  ||||||||  | ||||||||||| ||||||    
T  23635749 aatgcataatatatgtaaggttcggagttcaaactccagctaccaccaaaaaaaga 23635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 34446571 - 34446618
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  34446571 gataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 2140539 - 2140505
Alignment:
Q  233 acattgataataatttgagacaatgacataattca 267  Q
    |||||||||||||||||||| ||||||||||||||    
T  2140539 acattgataataatttgagaaaatgacataattca 2140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 9334027 - 9333977
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcgg 161  Q
    ||||| ||||| |||||||||||||||||||||| | ||||| ||||||||    
T  9334027 gttgacaaggacaatgcataatatatgtaaggtttggggttcgaacctcgg 9333977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 11591917 - 11591875
Alignment:
Q  244 aatttgagacaatgacataattcagtctaattatatgtgtcga 286  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcga 11591875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 15169957 - 15169991
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  15169957 aatgcataatatatgtaaggttcggggttcaaacc 15169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 15178729 - 15178763
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  15178729 aatgcataatatatgtaaggttcggggttcaaacc 15178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 17168895 - 17168945
Alignment:
Q  233 acattgataataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  17168895 acattgataataatttgaaaaaatgacataattcaatgtaactatatgtgt 17168945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 29711259 - 29711297
Alignment:
Q  229 atcaacattgataataatttgagacaatgacataattca 267  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  29711259 atcaacatcgataataatttgagaaaatgacataattca 29711297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 31971543 - 31971589
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||| |||||| ||||||||||||||| ||||| |||||||||||||    
T  31971543 gttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacc 31971589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 7086803 - 7086848
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 7569221 - 7569176
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  7569221 gataataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 8629731 - 8629694
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  8629731 aatgcataatatatgcaaggttcggggttcaaacctcg 8629694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 9027186 - 9027231
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| ||||||||| || |||||||||||||||    
T  9027186 taataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 9617442 - 9617487
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||| | |||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 24438329 - 24438284
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||||    
T  24438329 gttggtaagaataatgcataatatatgtaaagttcggggttcaaac 24438284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 30866195 - 30866150
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||| | |||||||||||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 32409213 - 32409177
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32409213 aatgcataatatatgtaaggttcg-ggttcaaacctcg 32409177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 35110077 - 35110114
Alignment:
Q  120 gataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  35110077 gataatgcataatatatgtaaggtttgaggttcgaacc 35110114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 1794998 - 1794958
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggtt 151  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  1794998 gttgatatggacaatgcataatatatgtaaggtccgaggtt 1794958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 3487945 - 3487981
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcga 147  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  3487945 gttgataagaataatgcataatatatgcaaggttcga 3487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 6503279 - 6503319
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  6503279 taaggataatgtataatatatgtaaggtttggggttcaaac 6503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 6814523 - 6814479
Alignment:
Q  115 ataaggataatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    ||||| ||||||||||||||||| || |||||| |||||||||||    
T  6814523 ataagaataatgcataatatatgcaacgttcgaagttcaaacctc 6814479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 8138505 - 8138457
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    ||||||||| | |||||||||||||||||||||  | ||||||||||||    
T  8138505 gttgataagaacaatgcataatatatgtaaggtctggggttcaaacctc 8138457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 9629392 - 9629436
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||| ||| |||||||||| | |||||||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 13211339 - 13211307
Alignment:
Q  233 acattgataataatttgagacaatgacataatt 265  Q
    |||||||||||||||||||| ||||||||||||    
T  13211339 acattgataataatttgagaaaatgacataatt 13211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 15187079 - 15187123
Alignment:
Q  113 tgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  15187079 tgataagtacaatgcataatatatgcaaggtccgaggttcaaacc 15187123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 15473527 - 15473483
Alignment:
Q  113 tgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  15473527 tgataagtacaatgcataatatatgcaaggtccgaggttcaaacc 15473483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 17177988 - 17177936
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||| |||||||||||||||||||||  ||||||| || |||||| |||||    
T  17177988 taaggaaaatgcataatatatgtaaggtatgaggttcgaatctcggccaccac 17177936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 27907998 - 27907938
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||| ||||||||||||||| ||||| |||||  | |||||||||| |||| ||||||||    
T  27907998 gttgacaaggataatgcataaaatatgcaaggtctggggttcaaaccccggccaccaccaa 27907938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 29680603 - 29680647
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||    
T  29680603 ttgatagggataatgcataatatatgcaaggttcggtgttcaaac 29680647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 1864931 - 1864878
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttgga 293  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttgga 1864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 41974775 - 41974832
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  41974775 gttgatagggataatgcataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 3777732 - 3777792
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||| |||||||| |||||||||  |||||||||||||||||||||| | ||||||||    
T  3777732 gttgatatggataatgtataatatatacaaggttcgaggttcaaacctcgaccaccaccaa 3777792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 29739351 - 29739411
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| |||||| ||||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  29739351 gttggtaaggacaatgcataaaatatgcaaggtccggggttcaaacctcggctaccaccaa 29739411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 34595891 - 34595943
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||| |||||    
T  34595891 taaggataatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 7925390 - 7925442
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||    
T  7925390 aatgcataatatatg-aaggttcggggttcaaacctcggccaccaccaaaaaaa 7925442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 16967241 - 16967196
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  16967241 gttgatatggacaatgcataatatatgcaaggttcgaggttcaaac 16967196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 7918262 - 7918218
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 34521225 - 34521177
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| ||||| || ||||||||||||||| ||||||||    
T  34521225 aatgcataatatatgcaaggtccggggttcaaacctcggccaccaccaa 34521177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 2445880 - 2445927
Alignment:
Q  242 ataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||| |||||||||||||| | |||| ||||||||||||||    
T  2445880 ataatttgagaaaatgacataattcaatttaatcatatgtgtcgatgt 2445927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 30678881 - 30678803
Alignment:
Q  92 tgtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||| |||||||||| |  |||| || ||| |||||||||||||||||||||||  ||||||||| ||||| |||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttcaaacttcggccaccac 30678803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 33153947 - 33153881
Alignment:
Q  93 gtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||| |||||||||| |  |||| || ||| ||||||||||||||||||||| |||||||||||||    
T  33153947 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaacc 33153881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 44482240 - 44482283
Alignment:
Q  242 ataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 47719154 - 47719087
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    |||| |||||||||||||||||||||| ||||||||  |||| || | |||| |||||||| ||||||    
T  47719154 gttggtaaggataatgcataatatatgcaaggttcggagttcgaatcccggccaccaccaaaaaaaga 47719087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 49432030 - 49431983
Alignment:
Q  121 ataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||||||||||| || |||||||||| |||| |||||    
T  49432030 ataatgcataatatatgtaaggtccggggttcaaaccccggccaccac 49431983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 7996724 - 7996686
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcgg 161  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  7996724 aatgcataatatatgtaaagtttgaggttcaaacctcgg 7996686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 13401623 - 13401657
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  13401623 aatgcataatatatgtaaggttcggggttcaaacc 13401657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  242 ataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 28979314 - 28979272
Alignment:
Q  120 gataatgcataatatatgtaaggttcgaggttcaaacctcggc 162  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  28979314 gataatgcataatatatgcaagattcgaggttcaaatctcggc 28979272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 40747826 - 40747780
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||||| |||||||||||||| | |||||||| |||||    
T  40747826 gataataatttgagaaaatgacataattcaatgtaattataggtgtc 40747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 49868025 - 49868071
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  49868025 gttgatatggataatgcataatatatgcaaggtccgagattcaaacc 49868071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 373053 - 373106
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcgatgttg 291  Q
    ||||||||||||||| |||||||| ||| ||| |||| |||||||||| |||||    
T  373053 gataataatttgagaaaatgacatgatttagtttaatcatatgtgtcggtgttg 373106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 4806830 - 4806793
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  4806830 aatgtataatatatgtaaggtttgaggttcaaacctcg 4806793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 16967007 - 16966974
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||||||||||| ||||||||||||||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaac 16966974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 22388222 - 22388177
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||| ||| |||||||||||||||||| ||||||| |||||||    
T  22388222 gttgatagggacaatgcataatatatgtaacgttcgagattcaaac 22388177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  242 ataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||| ||| |||||||||||| |||||||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 33175276 - 33175341
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaag 177  Q
    |||||| ||| |||||||||||||||||||||  |||||||||| ||| || ||||| || |||||    
T  33175276 ttgatatggacaatgcataatatatgtaaggtatgaggttcaaatctcagccaccacaaaaaaaag 33175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 34808610 - 34808569
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    |||| |||||| ||||||||||||||| ||||||||||||||    
T  34808610 gttgttaaggacaatgcataatatatgcaaggttcgaggttc 34808569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 36878469 - 36878514
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgt 281  Q
    ||||||||||||| ||| |||||||||||| |||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 42325566 - 42325611
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||||| |||||||||||||||| |||  ||||||||    
T  42325566 gataataatttgagaaaatgacataattcagtgtaacaatatgtgt 42325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 42416817 - 42416850
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggtt 144  Q
    ||||||||||||||||||||||||||| ||||||    
T  42416817 gttgataaggataatgcataatatatgcaaggtt 42416850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 47417804 - 47417857
Alignment:
Q  118 aggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| ||||||||||||||| ||||||||  |||||||||||||  ||||||||    
T  47417804 aggacaatgcataatatatgcaaggttcggagttcaaacctcggtcaccaccaa 47417857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 10233261 - 10233305
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    |||||| |||||| ||| |||||||||||| ||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 10843368 - 10843336
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    ||||||||||||||||||||||||||| |||||    
T  10843368 gttgataaggataatgcataatatatgcaaggt 10843336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 13794555 - 13794523
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    ||||||||||||||||||||||||||| |||||    
T  13794555 gttgataaggataatgcataatatatgcaaggt 13794523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 15670689 - 15670633
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||||||  |||||| |||||||||||||||||| | |||||||||| || ||||||    
T  15670689 gttgatagtgataatacataatatatgtaaggtttggggttcaaaccccgactacca 15670633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  242 ataatttgagacaatgacataattcagtctaattatatgtg 282  Q
    ||||||||||| ||| |||||||||||| ||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 21341210 - 21341242
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||||||||| |||||||||||||||||    
T  21341210 aatgcataatatatgcaaggttcgaggttcaaa 21341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 24124877 - 24124837
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggtt 151  Q
    |||| |||||| ||||||||||||||| |||||||||||||    
T  24124877 gttgttaaggacaatgcataatatatgcaaggttcgaggtt 24124837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 24176420 - 24176372
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcga 286  Q
    ||||||||||||||| ||| |||| ||||||| |||||||| |||||||    
T  24176420 gataataatttgagaaaataacatcattcagtgtaattataggtgtcga 24176372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27533269 - 27533317
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| |||||||| |||||||||| || | ||||||||    
T  27533269 aatgcataatatatgcaaggttcggggttcaaaccccgaccaccaccaa 27533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 34712434 - 34712390
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 35011407 - 35011451
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||| ||||| ||||||||||||||| ||||||| |||||||||    
T  35011407 gttgacaaggacaatgcataatatatgcaaggttcaaggttcaaa 35011451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 35632913 - 35632957
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||| ||| |||||||||||||| ||||||| ||||||||||    
T  35632913 gttgatatggacaatgcataatatatataaggtttgaggttcaaa 35632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 42860133 - 42860169
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    |||||||||||||||||||||||| | ||||||||||    
T  42860133 aatgcataatatatgtaaggttcgggattcaaacctc 42860169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 45652154 - 45652118
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  45652154 aatgcataatatatgtaaggtccgaggttcgaacctc 45652118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 45677304 - 45677356
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||| |||||||||||| |  ||||||||| |||| |||||    
T  45677304 taaggataatgcataacatatgtaaggtttggagttcaaaccccggccaccac 45677356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 29695029 - 29695089
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||| || | ||||||||    
T  29695029 gttgatatggacaatgcataatatatgtaaggttcgtggttcaaaccccgaccaccaccaa 29695089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 38749645 - 38749571
Alignment:
Q  209 tgaagcacaaactcagacatatcaacattgataataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    |||||||||||| | ||||| || |||  ||||||||||||| | |||||||||||||| | |||||||||||||    
T  38749645 tgaagcacaaacacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 22745908 - 22745949
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  22745908 taaggataatgcataatatatgtaaggtacgaggttcgaacc 22745949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 32565546 - 32565595
Alignment:
Q  119 ggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| |||||    
T  32565546 ggataatgcataatatatgtaaggtccgaagttcaaaccttggccaccac 32565595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 35413327 - 35413274
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||||||||||||||||| || || |||||||| | ||||||||||||||||||    
T  35413327 aatgcataatatatgtaacgtacggggttcaaatcccggctaccaccaacaaaa 35413274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 37472681 - 37472603
Alignment:
Q  205 actatgaagcacaaactcagacatatcaacattgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||||||||||||    ||| ||||||||||| |||| |||||||||||||  | |||| ||||||||||    
T  37472681 actatgaagcacaaactcagacatgg--acactgataataattcgagaaaatgacataattcgatataatcatatgtgtcg 37472603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 41091308 - 41091259
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    |||| |||||||| ||| |||||||||||| |||||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgt 41091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 13547466 - 13547502
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttc 152  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13547466 taaggataatgcataatgtatgtaaggttcgaggttc 13547502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 21657433 - 21657397
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21657433 aatgcataatatatgtaaggtttgaggttcaaacctc 21657397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 22434491 - 22434447
Alignment:
Q  134 tatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||    
T  22434491 tatgtaaggttcgaggttcaaacctcgaccaccaccaaaaaaaga 22434447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 29904440 - 29904480
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  29904440 taaggacaatacataatatatgtaaggttcgaggttcaaac 29904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 3052200 - 3052239
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  3052200 taaggataatgcataatatatgtaaggtttggggttcaaa 3052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 6471940 - 6471897
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgt 283  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 18557873 - 18557928
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||| |||||||||||| || ||||| |||| ||||||||||||||| ||||||    
T  18557873 taaggacaatgcataatatgtgcaaggtccgagattcaaacctcggctatcaccaa 18557928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 23016040 - 23015989
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttg 291  Q
    |||| |||||||| ||| |||||||||||| |||||||| ||||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttg 23015989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 5614779 - 5614825
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| |||||||||||||||||||||||||  | ||||||||||    
T  5614779 gttgatatggataatgcataatatatgtaaggtcgggggttcaaacc 5614825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 25863211 - 25863257
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  25863211 ataataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 37614459 - 37614417
Alignment:
Q  126 gcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||| |||||||||||||||||| ||||| |||||    
T  37614459 gcataatatatgcaaggttcgaggttcaaacttcggccaccac 37614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 39963514 - 39963552
Alignment:
Q  118 aggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  39963514 aggacaatgcataatatatgtaaggttcggggttcaaac 39963552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 42964523 - 42964573
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcgg 161  Q
    ||||||||||| |||| |||||||||||||||||||  |||||||| ||||    
T  42964523 gttgataaggacaatgtataatatatgtaaggttcggtgttcaaacatcgg 42964573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 3052305 - 3052342
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  3052305 aatgtataatatatgcaaggttcgaggttcaaacctcg 3052342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 3966511 - 3966556
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| ||| |||||||| |||||||||||||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 22394049 - 22394094
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||| ||| ||||||||||||||||||| | ||||||||||||    
T  22394049 gttgatatggacaatgcataatatatgtaagatccgaggttcaaac 22394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 22522836 - 22522783
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  22522836 aatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaa 22522783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 23118098 - 23118065
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggtt 144  Q
    ||||||||||| ||||||||||||||||||||||    
T  23118098 gttgataaggacaatgcataatatatgtaaggtt 23118065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 28588725 - 28588680
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 30502439 - 30502394
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 30542782 - 30542737
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 31264446 - 31264491
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 31545892 - 31545945
Alignment:
Q  118 aggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||||||||||||||||| ||||||| |||||| ||||| | | ||||||||    
T  31545892 aggataatgcataatatatgcaaggttcaaggttcgaaccttgacaaccaccaa 31545945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 36838551 - 36838596
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| |||||||| ||| |||||||||||||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 40445997 - 40446046
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    ||||||||||| ||||||||||||||| |||||  |||||||||| ||||    
T  40445997 gttgataaggacaatgcataatatatgcaaggtctgaggttcaaatctcg 40446046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 4432130 - 4432162
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggt 143  Q
    ||||||||||| |||||||||||||||||||||    
T  4432130 gttgataaggacaatgcataatatatgtaaggt 4432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 4763221 - 4763185
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctc 159  Q
    ||||||||||||||||||||| || ||||||||||||    
T  4763221 aatgcataatatatgtaaggtccggggttcaaacctc 4763185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 26655490 - 26655538
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||||||||| || ||||| |||| |||| ||||||||    
T  26655490 aatgcataatatatgtaaggtccggggttcgaaccccggccaccaccaa 26655538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 26927075 - 26927123
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||||||||| || ||||| |||| |||| ||||||||    
T  26927075 aatgcataatatatgtaaggtccggggttcgaaccccggccaccaccaa 26927123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 27679512 - 27679556
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||    
T  27679512 gttggtaaagataatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 31305932 - 31305888
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||    
T  31305932 ttgataaagacaatgcataatatatgtaaggtccgaagttcaaac 31305888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 40715995 - 40715939
Alignment:
Q  112 ttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||| ||| ||||||||||||||| ||||| || |||||||||| |||| |||||    
T  40715995 ttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 41600896 - 41600948
Alignment:
Q  230 tcaacattgataataatttgagacaatgacataattcagtctaattatatgtg 282  Q
    ||||||||||||||||||||||| ||| ||| |||||| | |||| |||||||    
T  41600896 tcaacattgataataatttgagaaaattacacaattcaatataatcatatgtg 41600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 20691324 - 20691372
Alignment:
Q  237 tgataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  20691324 tgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcg 20691372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 2563943 - 2563989
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  2563943 gttgataaaaataatgaataatatatgtaaggttcgaggttcaaacc 2563989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 10926483 - 10926548
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||| |||||| ||||||||||||||| |||||||| ||||||||  ||||| |||||||| ||||    
T  10926483 gttggtaaggacaatgcataatatatgcaaggttcggggttcaaatgtcggccaccaccaaaaaaa 10926548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 16192801 - 16192752
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||| |||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgt 16192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 53633687 - 53633623
Alignment:
Q  90 attgtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    |||||||| |||||||||| |  |||| |||||||||||||||||||||||||||| || |||||    
T  53633687 attgtcctcgtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttc 53633623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 29508452 - 29508504
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgttgg 292  Q
    ||||||||||| | ||| | |||||||||| ||||||||||||||||||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttgg 29508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 47099082 - 47099038
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  47099082 gttgataagaataatgcataatatatgcaaggttcggggttcaaa 47099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 52453292 - 52453244
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    ||||||||||||||| || ||||||||||||||||||| | ||||||||    
T  52453292 aatgcataatatatgcaaagttcgaggttcaaacctcgtccaccaccaa 52453244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 913635 - 913580
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    ||||||||||||||| ||||| || |||||||||||| || |||||||| ||||||    
T  913635 aatgcataatatatgcaaggtccggggttcaaacctctgccaccaccaaaaaaaga 913580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 24205094 - 24205047
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  24205094 gataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 3730217 - 3730171
Alignment:
Q  239 ataataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||||| |||||||||||||||| |||| ||| ||||||    
T  3730217 ataataatttgagataatgacataattcagtgtaatcataggtgtcg 3730171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 21160066 - 21160112
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||| |||||||||||||||||||||||||  | ||||||||||    
T  21160066 gttgatatggataatgcataatatatgtaaggtcgggggttcaaacc 21160112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 28965812 - 28965778
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  28965812 aatgcataatatatgtaaggttcggggttcaaacc 28965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 38131026 - 38130941
Alignment:
Q  93 gtcctagtgagcttaatt--gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||| |||||||||| |  |||| || ||| ||||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaa 38130941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 55126020 - 55126066
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||| |||| ||| ||||||||||| |||||||||||||||||||    
T  55126020 gttgatgaggacaatacataatatatgcaaggttcgaggttcaaacc 55126066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 5117222 - 5117263
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  5117222 gttgataaggacaatacataatatatgtaaggtttgaggttc 5117263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 7859530 - 7859493
Alignment:
Q  120 gataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  7859530 gataatgcataatatatgtaaggttcggggttcgaacc 7859493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 7928458 - 7928503
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||| | ||| |||||||||||| |||||||||||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 8039886 - 8039841
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| | |||||||||| |||||||||||||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 21245807 - 21245856
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcg 160  Q
    |||| |||||| |||||||||||||||||||||  | |||||||||||||    
T  21245807 gttggtaaggacaatgcataatatatgtaaggtctggggttcaaacctcg 21245856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29631212 - 29631265
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||||||||| |||||||| | |||||||| |||| |||||||| ||||    
T  29631212 aatgcataatatatgcaaggttcgggattcaaaccccggccaccaccaaaaaaa 29631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 38602983 - 38603032
Alignment:
Q  122 taatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||||||||||||||| |||||||  |||||||||| |||| ||||||||    
T  38602983 taatgcataatatatgcaaggttcatggttcaaaccccggccaccaccaa 38603032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 43630453 - 43630408
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  43630453 aatgcataatatatgtaaggtttgaggttcaaatttcggcaaccac 43630408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 47377396 - 47377351
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaac 156  Q
    |||| |||||| ||||||||||||||  ||||||||||||||||||    
T  47377396 gttggtaaggacaatgcataatatatacaaggttcgaggttcaaac 47377351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 48417904 - 48417848
Alignment:
Q  121 ataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaaga 178  Q
    ||||||||||||||||| ||||||||| ||||||||| |||  |||||||| ||||||    
T  48417904 ataatgcataatatatgcaaggttcgaagttcaaacc-cggacaccaccaaaaaaaga 48417848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 11251979 - 11252023
Alignment:
Q  233 acattgataataatttgagacaatgacataattcagtctaattat 277  Q
    |||||| ||||||||||||| ||| |||||||||||| |||||||    
T  11251979 acattgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 11658814 - 11658870
Alignment:
Q  231 caacattgataataatttgagacaatgacataattcagtctaattatatgtgtcgat 287  Q
    |||||| | ||||||||||||| |||  ||||||||||| | |||||||||||||||    
T  11658814 caacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcgat 11658870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 20503474 - 20503526
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcgatgttgga 293  Q
    |||||||||| | |||||||||||||||| |||||| | |||||| |||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttgga 20503526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 21149073 - 21149109
Alignment:
Q  238 gataataatttgagacaatgacataattcagtctaat 274  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  21149073 gataataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 31463508 - 31463544
Alignment:
Q  121 ataatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||  ||||||||||||    
T  31463508 ataatgcataatatatgtaaggtctgaggttcaaacc 31463544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 32804591 - 32804547
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 33634529 - 33634569
Alignment:
Q  128 ataatatatgtaaggttcgaggttcaaacctcggctaccac 168  Q
    ||||||||||||||||||| ||||||||| ||||| |||||    
T  33634529 ataatatatgtaaggttcggggttcaaacatcggccaccac 33634569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 48315071 - 48315027
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaa 155  Q
    |||| |||||||||||||||||||||| ||||| || ||||||||    
T  48315071 gttggtaaggataatgcataatatatgcaaggtccggggttcaaa 48315027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 49505205 - 49505161
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 52119390 - 52119446
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctacca 167  Q
    |||| |||||| ||||||||||||||| |||||||| ||||| |||| |||| ||||    
T  52119390 gttggtaaggacaatgcataatatatgcaaggttcggggttcgaaccccggccacca 52119446  T

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Target: scaffold1694 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 169 - 227
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccacc 169  Q
    ||||||| ||| |||||||||| |||| |||||  ||||||||||||||||||||||||    
T  169 gttgatatggacaatgcataatgtatgcaaggtctgaggttcaaacctcggctaccacc 227  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 61617 - 61557
Alignment:
Q  111 gttgataaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaa 171  Q
    |||| ||||||||||||||||| |||||||||| |  |||||||||| |||| ||||||||    
T  61617 gttggtaaggataatgcataatgtatgtaaggtccagggttcaaaccccggccaccaccaa 61557  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 40024 - 40062
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcgg 161  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  40024 aatgcataatatatgcaaggttagaggttcaaacctcgg 40062  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 190007 - 189973
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacc 157  Q
    |||||||||||||||||||||||| ||||||||||    
T  190007 aatgcataatatatgtaaggttcggggttcaaacc 189973  T

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Target: scaffold0204 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 16169 - 16206
Alignment:
Q  115 ataaggataatgcataatatatgtaaggttcgaggttc 152  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  16169 ataaggacaatgcataatatatgtaaagttcgaggttc 16206  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 44572 - 44531
Alignment:
Q  244 aatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||| ||| |||||||||||| |||||||||||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 9798 - 9753
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| || ||||||||| |||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 90851 - 90900
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcgatgt 289  Q
    ||||||||||||| ||| | |||||||||| ||||||||| |||||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcgatgt 90900  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 135363 - 135318
Alignment:
Q  240 taataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    ||||||||||||| ||| ||||||||| || |||||||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 204616 - 204669
Alignment:
Q  123 aatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    ||||||||| |||||||||||||| |||||||||| | || |||||| ||||||    
T  204616 aatgcataaaatatgtaaggttcggggttcaaaccgcagccaccacctacaaaa 204669  T

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Target: scaffold0734 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 4383 - 4323
Alignment:
Q  116 taaggataatgcataatatatgtaaggttcgaggttcaaacctcggctaccaccaacaaaa 176  Q
    |||||||||||||||||||||| || ||| | ||||| ||||||||  |||||||| ||||    
T  4383 taaggataatgcataatatatggaatgtttggggttcgaacctcggacaccaccaaaaaaa 4323  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  241 aataatttgagacaatgacataattcagtctaattatatgtgtcg 285  Q
    |||||||||||| ||| |||||||||||| |||||||| ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 263439 - 263379
Alignment:
Q  224 gacatatcaacattgataataatttgagacaatgacataattcagtctaattatatgtgtc 284  Q
    ||||| |||||| || ||||||||||||| ||  |||||||||||| |||||||| |||||    
T  263439 gacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

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