View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9095_low_19 (Length: 253)
Name: NF9095_low_19
Description: NF9095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9095_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 2740194 - 2740429
Alignment:
| Q |
3 |
acttttccccaaaagttcatagtcatatcaattgactatttttccaaatggataaaaacaaagcccttgtccactaatacaacagaaagtttatatggaa |
102 |
Q |
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| T |
2740194 |
acttttccccaaaagttcatagtcatatcaattgactatttttccaaatggataaaaacaaagcccttgtccactaatacaacagaaagtttatatggaa |
2740293 |
T |
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| Q |
103 |
aaatgtcatttgtcgatcaccatgagcttccccacaccatcataaaagacaatgacacccaattttctagttaaagaaaggtttcaagatttatgtggtg |
202 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2740294 |
aaatgtcatttgtcgatcaccaagagcttccccacaccatcataagagacaatgagacccaattttctagttaaagaaaggtttcaagatttatgtggtg |
2740393 |
T |
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| Q |
203 |
agttcgagattcagttgaagtttgcatcggttgaac |
238 |
Q |
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||||| |||||||||||||||||||||||||||||| |
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| T |
2740394 |
agttcaagattcagttgaagtttgcatcggttgaac |
2740429 |
T |
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