View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9095_low_5 (Length: 620)

Name: NF9095_low_5
Description: NF9095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9095_low_5
NF9095_low_5
[»] chr8 (10 HSPs)
chr8 (1-245)||(27309783-27310022)
chr8 (219-376)||(12750154-12750312)
chr8 (282-335)||(43846291-43846344)
chr8 (241-376)||(34362988-34363123)
chr8 (309-376)||(22842147-22842215)
chr8 (219-335)||(157490-157606)
chr8 (307-370)||(33102104-33102168)
chr8 (280-335)||(34072904-34072959)
chr8 (310-372)||(35690591-35690654)
chr8 (245-322)||(5995150-5995227)
[»] chr5 (14 HSPs)
chr5 (218-370)||(37442518-37442670)
chr5 (224-376)||(9828179-9828330)
chr5 (282-376)||(32303607-32303702)
chr5 (250-353)||(32827017-32827120)
chr5 (282-379)||(8254694-8254791)
chr5 (223-370)||(42923876-42924024)
chr5 (266-352)||(36781027-36781114)
chr5 (213-335)||(8055196-8055320)
chr5 (280-325)||(28217976-28218021)
chr5 (280-325)||(28228830-28228875)
chr5 (280-321)||(28228862-28228903)
chr5 (219-295)||(32303658-32303733)
chr5 (309-365)||(34398078-34398134)
chr5 (314-370)||(34594661-34594717)
[»] chr7 (6 HSPs)
chr7 (282-370)||(41909334-41909422)
chr7 (267-370)||(3756380-3756484)
chr7 (311-355)||(41340986-41341030)
chr7 (208-263)||(31195636-31195691)
chr7 (261-368)||(31756809-31756919)
chr7 (315-374)||(10084613-10084672)
[»] chr1 (9 HSPs)
chr1 (223-327)||(622857-622961)
chr1 (213-352)||(14210626-14210765)
chr1 (245-301)||(6960014-6960070)
chr1 (282-372)||(21322543-21322634)
chr1 (276-322)||(3393030-3393076)
chr1 (274-335)||(3851745-3851804)
chr1 (298-355)||(52186902-52186960)
chr1 (226-327)||(31847645-31847746)
chr1 (265-368)||(29855934-29856038)
[»] scaffold0254 (1 HSPs)
scaffold0254 (243-370)||(23196-23323)
[»] chr6 (9 HSPs)
chr6 (243-370)||(2146735-2146862)
chr6 (214-370)||(3606957-3607113)
chr6 (219-377)||(30841105-30841262)
chr6 (219-335)||(28992377-28992493)
chr6 (307-372)||(2725843-2725909)
chr6 (280-372)||(3644736-3644829)
chr6 (266-335)||(3788926-3788995)
chr6 (231-378)||(6566840-6566988)
chr6 (231-301)||(6575141-6575212)
[»] chr4 (18 HSPs)
chr4 (225-345)||(30211934-30212054)
chr4 (307-353)||(30097447-30097493)
chr4 (219-292)||(43635751-43635824)
chr4 (282-335)||(53979055-53979108)
chr4 (278-327)||(56369521-56369570)
chr4 (282-376)||(959081-959175)
chr4 (240-370)||(50136474-50136604)
chr4 (223-324)||(36138985-36139086)
chr4 (284-376)||(52450149-52450242)
chr4 (219-331)||(42096740-42096852)
chr4 (245-324)||(7095578-7095657)
chr4 (280-335)||(16962859-16962914)
chr4 (281-367)||(33648207-33648294)
chr4 (311-377)||(8434236-8434302)
chr4 (266-328)||(37182222-37182284)
chr4 (283-352)||(45800248-45800318)
chr4 (282-370)||(56210956-56211043)
chr4 (282-326)||(23811317-23811361)
[»] chr3 (9 HSPs)
chr3 (223-367)||(52204671-52204815)
chr3 (218-295)||(36703044-36703121)
chr3 (208-295)||(9144153-9144240)
chr3 (280-323)||(18360111-18360154)
chr3 (282-367)||(36703076-36703162)
chr3 (282-335)||(20991593-20991646)
chr3 (282-375)||(33486894-33486987)
chr3 (282-335)||(35310404-35310457)
chr3 (283-335)||(40355903-40355955)
[»] chr2 (11 HSPs)
chr2 (213-376)||(33833356-33833519)
chr2 (266-355)||(17793893-17793982)
chr2 (219-335)||(17793993-17794109)
chr2 (223-367)||(43294567-43294710)
chr2 (282-372)||(44540663-44540754)
chr2 (219-377)||(39555930-39556087)
chr2 (282-372)||(6620006-6620097)
chr2 (266-370)||(32016436-32016542)
chr2 (219-292)||(8514003-8514076)
chr2 (282-335)||(13387358-13387411)
chr2 (282-326)||(44069891-44069935)
[»] scaffold0004 (1 HSPs)
scaffold0004 (223-293)||(130688-130758)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 1e-64; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27310022 - 27309783
Alignment:
Q  1 acattgatattgaatattttcttcttttgaccttctttttcaaaaaagagtgnnnnnnnnnn---gtaatttagtatattgatgccaaacagggcagtat 97  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||             ||||| |||||||||||||||||| |||| |||||    
T  27310022 acattgatattgaatgttttcttcttttgaccttctttttcaaaaaagagtgaaaaaaaaagaaagtaatatagtatattgatgccaaatagggtagtat 27309923  T
Q  98 cctaacattattcatttcatccaaagcaaacatgtatcgactttgacttattatgaaattgttagctagtgggattgctcgtggtccgtcaaattggatt 197  Q
    |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||    
T  27309922 cctaacattattcat-----ccaaagcaaacatgtatcgactttgacttattatgaaattgttagctaataggattgctcgtggtccgtcgaattgaatt 27309828  T
Q  198 ggagaattactgcttttctttcatctgtttttcctcatttccgtccta 245  Q
    | | |||   |||||||||| |||||||||||||||||||||||||||    
T  27309827 gaaaaat---tgcttttcttccatctgtttttcctcatttccgtccta 27309783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 376
Target Start/End: Complemental strand, 12750312 - 12750154
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||||||||| |||||| ||  |||||||||||||| |||  ||| ||||||  | ||| |||||||| || | ||||||||| || ||||||||||||    
T  12750312 catctgtttttgctcattcccaccctacgtgagttaactcaagctgaaaaatacgcttacgtaagttaattcgcactgaaaatacacctgcgtgagttaa 12750213  T
Q  319 ctcacgctcgactattt-gatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    |||||||||| |||||| || ||  ||||| ||||||| ||| |||||||||| |||||    
T  12750212 ctcacgctcggctatttggacggggatgaggaaaaacagatgggagaagagcaattatc 12750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 43846344 - 43846291
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  43846344 agttaactcttgctgagaatatacatgcgtgagttaactcacgctcgactattt 43846291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 376
Target Start/End: Original strand, 34362988 - 34363123
Alignment:
Q  241 tcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatgg 340  Q
    ||||| ||||||||| ||||| || |||||||| || | |||||||||||||| | |||||| |  ||||| |||||||| | ||||| ||||||||| |    
T  34362988 tcctatgtgagttaactcacattgaaaaatatatctgcgtaagttaactcacgttaaaaatacatctgcgtaagttaacttaagctcggctatttgatag 34363087  T
Q  341 aaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    ||||||  ||||||| |||   |||||||| |||||    
T  34363088 aaatgaacaaaaacagatggatgaagagcaattatc 34363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 22842215 - 22842147
Alignment:
Q  309 cgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||| ||| ||||||| || |||||    
T  22842215 cgtgagttaactcacgctcgactattttgacgggaatgagaaaaaacagatgggagaagaacaattatc 22842147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 157490 - 157606
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||| ||||| |||||| || ||  ||||||||||| |||| ||| |||||| |||||| | | ||||||||   |||||||  |||||||||||||||    
T  157490 catctatttttgctcattcccatctaacgtgagttaactcacgctgaaaaatacacctacgtgaattaactcatattgaaaatgcacatgcgtgagttaa 157589  T
Q  319 ctcacgctcgactattt 335  Q
     ||||| || |||||||    
T  157590 ttcacgttccactattt 157606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 33102104 - 33102168
Alignment:
Q  307 tgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    |||||||||||||||||||||| ||| ||||| || |||||| ||||||| || |||||||||||    
T  33102104 tgcgtgagttaactcacgctcggctattttgacgggaatgagcaaaaacagataagagaagagca 33102168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 34072904 - 34072959
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||||||||||||||| |||| || | |||||||||||||| ||||| ||||||    
T  34072904 taagttaactcacgctgagaatacacctacgtgagttaactcatgctcgcctattt 34072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 35690591 - 35690654
Alignment:
Q  310 gtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    ||||||||| ||||||||||||| |||||||  |||||| ||||||| ||||||||||| ||||    
T  35690591 gtgagttaattcacgctcgactattttgatgagaatgagcaaaaacatatgagagaagaacagt 35690654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 5995227 - 5995150
Alignment:
Q  245 acgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||||||| |||| ||| |||||| || ||    ||||||||||||  ||||||| |||||||||||||||||||    
T  5995227 acgtgagttaactcacgctgaaaaatacacatatgcgagttaactcacgtcgaaaatacacatgcgtgagttaactca 5995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 37442518 - 37442670
Alignment:
Q  218 tcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagtta 317  Q
    |||||||||||| |||||| ||||||||| |||||||| |||| ||| |||||| |||||| | |||||||||| | |||||||| |  ||| |||||||    
T  37442518 tcatctgtttttgctcattcccgtcctacatgagttaactcacgctgaaaaatacacctacgtgagttaactcatgttgaaaatacatctgcatgagtta 37442617  T
Q  318 actcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    ||||||||||| |||||||| || |||||| ||||||| |||  |||||||||    
T  37442618 actcacgctcggctatttgacgggaatgagcaaaaacagatggaagaagagca 37442670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 224 - 376
Target Start/End: Complemental strand, 9828330 - 9828179
Alignment:
Q  224 gtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcac 323  Q
    |||||| ||||||||||  |||||||| |||| |||| ||| |||||| |||||| | ||||||||||  ||||||||| || || ||| ||||||||||    
T  9828330 gtttttgctcatttccgctctacgtgatttaactcacgctgaaaaatacacctacgtgagttaactcat-ctgaaaatacacttgtgtgggttaactcac 9828232  T
Q  324 gctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    |||| ||||||||| || |||||| |||| || ||| |||||||||| |||||    
T  9828231 gctctactatttgacgggaatgagcaaaaccagatgggagaagagcaattatc 9828179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 32303702 - 32303607
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||| |||| || |||  ||||||||| |||||    
T  32303702 agttaactcacgctgaaaatacacatgcgtgagttaactcacgctcgactattttgacgaaaatgagcaaaatcagatggaagaagagcaattatc 32303607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 32827017 - 32827120
Alignment:
Q  250 agttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaa 349  Q
    |||||| |||| ||| |||||| |||||||| ||||  |||||| |||||||| || || ||||||||||||| | |||||||||||| ||||||||| |    
T  32827017 agttaactcacgctgaaaaatacacctacatgagttttctcacgttgaaaatacacttgtgtgagttaactcatgttcgactatttgacggaaatgagca 32827116  T
Q  350 aaaa 353  Q
    ||||    
T  32827117 aaaa 32827120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 379
Target Start/End: Complemental strand, 8254791 - 8254694
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatcatt 379  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| ||| || ||| | ||||| ||| ||||||| ||| |||||||||| ||||||||    
T  8254791 agttaactcacactgaaaatgcacatgcgtgagttaatttacgttcggcttttttacggaaacgagtaaaaacatatgggagaagagcaattatcatt 8254694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 42923876 - 42924024
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||| |||||| |||| | || ||||||||  ||| ||| ||||||||| | ||| |||||||||||| |||||||  || ||| ||||||||| ||    
T  42923876 tgtttttgctcattcccgttcaacatgagttaacccacgctgaaaaatatacatgcatgagttaactcacgttgaaaatgcacctgcatgagttaacaca 42923975  T
Q  323 cgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    || |||  || ||||| || || ||| ||||||| ||| ||||||||||    
T  42923976 cgttcggttattttgaagggaacgagtaaaaacatatgtgagaagagca 42924024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 36781027 - 36781114
Alignment:
Q  266 aaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaa 352  Q
    ||||||||| ||| | | |||||||||||||| ||||||  | ||||| |||||| || |||||||| ||||| ||||||||||||||    
T  36781027 aaaatatacatacgtgaattaactcacgctgagaatatatttacgtgaattaactgacactcgactattttgacggaaatgagaaaaa 36781114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 8055320 - 8055196
Alignment:
Q  213 ttctttcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgc--tgaaaatatacatgcg 310  Q
    |||| |||| |||||||  ||||| |||||| || | |||||| |||| ||| |||||| | |||| | |||||| |||| |  |||||||  ||||||     
T  8055320 ttctctcatttgtttttgttcattcccgtccaactttagttaactcacgctgaaaaatacatctacgtgagttaattcacacattgaaaatgcacatgca 8055221  T
Q  311 tgagttaactcacgctcgactattt 335  Q
     ||||||||||||||||||||||||    
T  8055220 cgagttaactcacgctcgactattt 8055196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 28218021 - 28217976
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcacgc 325  Q
    |||||||||||||| ||| |||| || |||||||||||||||||||    
T  28218021 taagttaactcacgatgagaatacacctgcgtgagttaactcacgc 28217976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 28228830 - 28228875
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcacgc 325  Q
    |||||||||||||| ||| |||| ||||||| ||||||||||||||    
T  28228830 taagttaactcacgatgagaatacacatgcgcgagttaactcacgc 28228875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 28228903 - 28228862
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactc 321  Q
    |||||||||||||| ||| |||| ||||||||||||||||||    
T  28228903 taagttaactcacgatgagaatacacatgcgtgagttaactc 28228862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 32303733 - 32303658
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgct 295  Q
    |||| |||||| ||||||||||||||| ||||||||| |||| || ||||||| || | | | ||||||||||||||    
T  32303733 catccgtttttgctcatttccgtcctatgtgagttaactcacgct-gaaaatacacatgcgtgagttaactcacgct 32303658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 34398134 - 34398078
Alignment:
Q  309 cgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaa 365  Q
    |||||||||||||| ||||  |||||||||||||||||  ||||||| ||| |||||    
T  34398134 cgtgagttaactcatgctcagctatttgatggaaatgaacaaaaacatatgtgagaa 34398078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 34594717 - 34594661
Alignment:
Q  314 gttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    ||||||||||||||| |||||| | || |||||||||||| | ||| ||||||||||    
T  34594717 gttaactcacgctcggctatttaacgggaatgagaaaaaaaagatgggagaagagca 34594661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 41909334 - 41909422
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||| || ||||||| || |||||||||||||| ||||||||||||||    
T  41909334 agttaacttacgttgaaaatatacatgcgtgagttaacttacgcttgattatttgacgggaatgagaaaaaacagatgagagaagagca 41909422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 370
Target Start/End: Complemental strand, 3756484 - 3756380
Alignment:
Q  267 aaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaa 365  Q
    ||||| |||||||| |||||||||||||||| |||  || |||  |||||||||||| |||||||| ||||| || |||||| ||||||| ||| |||||    
T  3756484 aaatacacctacatgagttaactcacgctgagaatccacttgcacgagttaactcacactcgactattttgacgggaatgagcaaaaacaaatgggagaa 3756385  T
Q  366 gagca 370  Q
    |||||    
T  3756384 gagca 3756380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 41340986 - 41341030
Alignment:
Q  311 tgagttaactcacgctcgactatttgatggaaatgagaaaaaaca 355  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  41340986 tgagttaactcacgttcaactatttgatggaaatgagaaaaaaca 41341030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 31195691 - 31195636
Alignment:
Q  208 tgcttttctttcatctgtttttcctcatttccgtcctacgtgagttaattcacact 263  Q
    |||| ||||||||||||||||| ||||||||||| | ||| |||||||||||||||    
T  31195691 tgctcttctttcatctgtttttactcatttccgttcaacgcgagttaattcacact 31195636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 31756809 - 31756919
Alignment:
Q  261 actggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaac--tcacgctcgacta-tttgatggaaatgagaaaaaacaca 357  Q
    |||| |||||| |||| ||| |||||||||||||||| ||||||  |||||||||||||  |||| ||| |||| ||| | ||||||||| ||||||| |    
T  31756809 actgaaaaatacacctgcatgagttaactcacgctgagaatatatctgcgtgagttaactatcacactcaactatttttacggaaatgagcaaaaacaga 31756908  T
Q  358 tgagagaagag 368  Q
    || ||||||||    
T  31756909 tgggagaagag 31756919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 10084672 - 10084613
Alignment:
Q  315 ttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagtta 374  Q
    |||||||||||| | |||||||| || |||||| ||||||| ||||||||||||| ||||    
T  10084672 ttaactcacgcttggctatttgacgggaatgagcaaaaacagatgagagaagagcggtta 10084613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 622857 - 622961
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||| |||||| |||||||||||||||||| ||||  || |||||| |||||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  622857 tgtttttgctcattcccgtcctacgtgagttaactcacgttgaaaaatacacctacgtgagttaactcacgctgaaaatacacatgcgcgagttaactca 622956  T
Q  323 cgctc 327  Q
     ||||    
T  622957 ggctc 622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 352
Target Start/End: Complemental strand, 14210765 - 14210626
Alignment:
Q  213 ttctttcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtg 312  Q
    ||||| ||||| ||||| |||||| || || |||||||| ||| |||| ||| |||||| |||||  | |||||||||||| |||||||  |  |||||     
T  14210765 ttcttccatctatttttgctcattcccatcttacgtgagataactcacgctgaaaaatacacctatgtgagttaactcacgttgaaaatgcatctgcgtt 14210666  T
Q  313 agttaactcacgctcgactatttgatggaaatgagaaaaa 352  Q
     |||||||||| ||||||||||||| || |||||| ||||    
T  14210665 tgttaactcacactcgactatttgacgggaatgagcaaaa 14210626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 6960014 - 6960070
Alignment:
Q  245 acgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaat 301  Q
    |||| |||||| |||||||| |||||| |||||| |||||||||||||| |||||||    
T  6960014 acgtaagttaactcacactgaaaaatacacctacgtaagttaactcacgttgaaaat 6960070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 21322543 - 21322634
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    |||||||| ||| ||| |||| || ||||||||||||||||| |||| ||| ||||| || | |||| ||||||| ||| ||||||||||||    
T  21322543 agttaacttacgttgagaatacacctgcgtgagttaactcaccctcggctattttgacgggattgagcaaaaacagatgggagaagagcagt 21322634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 3393076 - 3393030
Alignment:
Q  276 tacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||| ||||||||||||||||||||| || | ||||||||||||||    
T  3393076 tacatgagttaactcacgctgaaaatacacctacgtgagttaactca 3393030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 3851804 - 3851745
Alignment:
Q  274 cctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    ||||||| ||||||||||| ||||||||| || |||  ||||||||||||||||| ||||||    
T  3851804 cctacatgagttaactcacactgaaaatacacttgc--gagttaactcacgctcggctattt 3851745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 52186902 - 52186960
Alignment:
Q  298 aaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaaca 355  Q
    ||||| || |||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  52186902 aaatacacctgcgtgagttaactcacgctcggctattttgatggaagtgagcaaaaaca 52186960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 31847645 - 31847746
Alignment:
Q  226 ttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgc 325  Q
    |||| ||||||| ||||| || |||||||| ||||| || |||||| | |||  | |||||||||||| | |||||  || |||||||||||||||| ||    
T  31847645 ttttactcattttcgtccaacatgagttaactcacagtgaaaaatacatctatgtgagttaactcacggtaaaaatgcacttgcgtgagttaactcatgc 31847744  T
Q  326 tc 327  Q
    ||    
T  31847745 tc 31847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 29856038 - 29855934
Alignment:
Q  265 gaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagag 363  Q
    ||||||| |||| ||| |||||||||  ||||| |||| |  ||| ||||  |||||||||||||||| |||||||| |||||| ||||||| ||| | |    
T  29856038 gaaaatacacctgcatgagttaactcgtgctgagaatacatttgcctgaggcaactcacgctcgactattttgatgggaatgagcaaaaacagatggggg 29855939  T
Q  364 aagag 368  Q
    |||||    
T  29855938 aagag 29855934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 23323 - 23196
Alignment:
Q  243 ctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaa 342  Q
    ||||||||||||||||||  || |||| | |||||| |||||||||||||| ||||| || ||||||||||||| ||||||||||  |||||||| ||||    
T  23323 ctacgtgagttaattcacgttgaaaaacacacctacgtaagttaactcacgttgaaattacacatgcgtgagttcactcacgctctgctatttgacggaa 23224  T
Q  343 atgagaaaaaacacatgagagaagagca 370  Q
    || || ||||| | ||| ||||||||||    
T  23223 ataagcaaaaatagatgggagaagagca 23196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 7e-23; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 2146862 - 2146735
Alignment:
Q  243 ctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaa 342  Q
    ||||||||||||||||||  || |||| | |||||| |||||||||||||| ||||| || ||||||||||||| ||||||||||  |||||||| ||||    
T  2146862 ctacgtgagttaattcacgttgaaaaacacacctacgtaagttaactcacgttgaaattacacatgcgtgagttcactcacgctctgctatttgacggaa 2146763  T
Q  343 atgagaaaaaacacatgagagaagagca 370  Q
    || || ||||| | ||| ||||||||||    
T  2146762 ataagcaaaaatagatgggagaagagca 2146735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 214 - 370
Target Start/End: Original strand, 3606957 - 3607113
Alignment:
Q  214 tctttcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtga 313  Q
    |||| ||||| ||||| |||||||||   |||| |||||||| | || |||||||||| |||||| | |||||||||||| | |||||| ||||||||||    
T  3606957 tcttccatctatttttgctcatttccactctacatgagttaacttacgctggaaaatacacctacgtgagttaactcacgttaaaaatacacatgcgtga 3607056  T
Q  314 gttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    || || |||||||| ||||||| | | ||||||| ||||| | ||| ||||||||||    
T  3607057 gtcaattcacgctcaactattttacgaaaatgagcaaaaatagatgggagaagagca 3607113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 377
Target Start/End: Complemental strand, 30841262 - 30841105
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||||||||| || ||| | || ||||||||||||| ||| |||| |||||| |  |  |||||||||||||  |||||||||  |||| ||||||||     
T  30841262 catctgtttttgcttattcctgttctacgtgagttaactcatactgaaaaatacaa-tgtataagttaactcatactgaaaatacgcatgtgtgagttag 30841164  T
Q  319 ctcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatca 377  Q
    ||||| ||||||||||||| ||||||||| ||||||| ||  ||||||| |||||||||    
T  30841163 ctcacactcgactatttgacggaaatgagtaaaaacagataggagaagaacagttatca 30841105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 28992377 - 28992493
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||||||||| |||||| ||   ||||||||||||| |||| ||| |||||| || ||| | ||||||||||||||||||||| ||||| |||||||||    
T  28992377 catctgtttttactcattccctctctacgtgagttaactcacgctgaaaaatacacatacgtgagttaactcacgctgaaaatacacatgtgtgagttaa 28992476  T
Q  319 ctcacgctcgactattt 335  Q
     ||||| ||| ||||||    
T  28992477 atcacgatcgtctattt 28992493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 2725843 - 2725909
Alignment:
Q  307 tgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    |||||||||||||||||||||| ||| ||||| || |||||| ||||||| ||| ||||||||||||    
T  2725843 tgcgtgagttaactcacgctcggctattttgacgggaatgagcaaaaacagatgggagaagagcagt 2725909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 3644829 - 3644736
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    ||||||||||||| ||||||||| || ||| | ||||||||||||||  |||| ||||| |  |||||| ||||| | ||||||||||||||||    
T  3644829 taagttaactcacactgaaaatacacctgcataagttaactcacgcttaactattttgacgagaatgagcaaaaatagatgagagaagagcagt 3644736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 3788926 - 3788995
Alignment:
Q  266 aaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||| |||||| ||||||||||||| |||||||||| | ||||| |||||||| | ||||| ||||||    
T  3788926 aaaatacacctacgtaagttaactcacactgaaaatattcttgcgtaagttaacttatgctcggctattt 3788995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 378
Target Start/End: Original strand, 6566840 - 6566988
Alignment:
Q  231 ctcatttccgtcctacgtgagttaattcacactggaaaa-tatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcga 329  Q
    |||||| |||||| ||||||||||| |||||||  |||| ||||| ||||| |||||| | ||| ||||||| ||   |||||| |||||||||  ||||    
T  6566840 ctcattcccgtccaacgtgagttaactcacactaaaaaactatacatacatgagttaatttacgttgaaaatttatcagcgtgacttaactcacattcga 6566939  T
Q  330 cta-tttgatggaaatgagaaaaaacacatgagagaagagcagttatcat 378  Q
    ||| ||| ||||||| ||| ||||| | ||| |||||||||| |||||||    
T  6566940 ctattttaatggaaacgagcaaaaatatatg-gagaagagcaattatcat 6566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 6575141 - 6575212
Alignment:
Q  231 ctcatttccgtcctacgtgagttaattcacactgg-aaaatatacctacataagttaactcacgctgaaaat 301  Q
    |||||| |||||| ||||||||||| |||||||   ||||||||||||| |||||||||| ||| |||||||    
T  6575141 ctcattcccgtccaacgtgagttaactcacactaataaaatatacctacgtaagttaacttacgttgaaaat 6575212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 30212054 - 30211934
Alignment:
Q  225 tttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacg 324  Q
    ||||| |||||| || ||| ||||||||||| ||||||||||||||  |||||| | |||||||||||| |||||||  ||||| ||||||||||||| |    
T  30212054 ttttttctcattcccatccaacgtgagttaactcacactggaaaatgcacctacgtgagttaactcacgttgaaaatgcacatgtgtgagttaactcatg 30211955  T
Q  325 ctcgactatttgatggaaatg 345  Q
    ||||  ||||| || ||||||    
T  30211954 ctcggttattttattgaaatg 30211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 30097493 - 30097447
Alignment:
Q  307 tgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  30097493 tgcgtgagttaactcacgctcgactatttgatggaaatgagcaaaaa 30097447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 43635751 - 43635824
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcac 292  Q
    ||||| ||||| |||||||||||||||| |||||||| |||| |||||||||| |||||  |||||||||||||    
T  43635751 catctatttttgctcatttccgtcctacatgagttaactcacgctggaaaatacacctatttaagttaactcac 43635824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 53979108 - 53979055
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  53979108 agttaactcacgctgaaaatacacatgtgtgagttaactcacgttcgactattt 53979055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 56369521 - 56369570
Alignment:
Q  278 cataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctc 327  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  56369521 cataaattaaatcacgctgaaaatatacatgcgtgagttaactcacgctc 56369570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 959175 - 959081
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    |||||||| |||||||||||| || ||| | |||||||| |||||||| ||||| | ||||||||| ||||| | ||| |||||||||| |||||    
T  959175 agttaacttacgctgaaaatacacctgcatcagttaactgacgctcgattatttaacggaaatgagcaaaaatagatgggagaagagcaattatc 959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 370
Target Start/End: Complemental strand, 50136604 - 50136474
Alignment:
Q  240 gtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatg 339  Q
    |||||||||||||||| |||||||| |||||| |||||  | ||||||||||  ||||||||| || ||||   | ||||| ||||||| |||||||| |    
T  50136604 gtcctacgtgagttaactcacactgaaaaatacacctatgtgagttaactcaaactgaaaatacacctgcgcatgataacttacgctcggctatttgacg 50136505  T
Q  340 gaaatgagaaaaaacacatgagagaagagca 370  Q
    | |||||| |||||   ||| ||||||||||    
T  50136504 ggaatgagcaaaaattaatgggagaagagca 50136474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 36139086 - 36138985
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||| ||||||  | ||| || |||||||| |||| ||| |||||  || ||||| |||||||||||| |||||||  |||||||||||||||||||    
T  36139086 tgtttttgctcattctcatccaacatgagttaactcacgctgaaaaattcacatacatgagttaactcacgttgaaaatgcacatgcgtgagttaactca 36138987  T
Q  323 cg 324  Q
    ||    
T  36138986 cg 36138985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 52450149 - 52450242
Alignment:
Q  284 ttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    |||||||||| ||||||||||  ||| |||||||||||||||||| ||| ||||| || |||||| ||||||| ||| ||| | |||| |||||    
T  52450149 ttaactcacgttgaaaatataactgcttgagttaactcacgctcggctattttgacgggaatgagtaaaaacagatgggaggaaagcaattatc 52450242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 42096852 - 42096740
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||| ||||| |||||| |  ||| ||||||||||| |||| ||| |||||  |||||  | |||||||||||| ||||||| ||  | ||||||||||    
T  42096852 catctatttttgctcattcctatccaacgtgagttaactcacgctgaaaaatgcacctatgtgagttaactcacgttgaaaatgtatctacgtgagttaa 42096753  T
Q  319 ctcacgctcgact 331  Q
    |||||| ||||||    
T  42096752 ctcacgttcgact 42096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 7095578 - 7095657
Alignment:
Q  245 acgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacg 324  Q
    ||||||||||| |||||||| |||||| || ||  | |||||||| ||  |||||||| || ||||||||||||||||||    
T  7095578 acgtgagttaactcacactgaaaaatacacttatgtgagttaacttacattgaaaatacacttgcgtgagttaactcacg 7095657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 16962914 - 16962859
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    ||||| ||||||| ||||||||| |  | |||||||||||||||||||||||||||    
T  16962914 taagtcaactcacactgaaaatacatctacgtgagttaactcacgctcgactattt 16962859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 33648294 - 33648207
Alignment:
Q  281 aagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaaga 367  Q
    ||||||||||||||||| |||| |  ||||| ||||||||||| |||||||| ||||| || |||||| ||||| | ||| |||||||    
T  33648294 aagttaactcacgctgagaatacatctgcgttagttaactcacactcgactattttgacgggaatgagcaaaaatatatgggagaaga 33648207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 8434236 - 8434302
Alignment:
Q  311 tgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatca 377  Q
    ||||||||| ||||||||  |||||||  |||||||| ||||| | |||||||||||||| ||||||    
T  8434236 tgagttaacgcacgctcggttatttgacagaaatgagcaaaaaaagatgagagaagagcaattatca 8434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 37182222 - 37182284
Alignment:
Q  266 aaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcg 328  Q
    |||||| |||||| | |||||||||||| |||||||  ||||| ||||||||||| |||||||    
T  37182222 aaaatacacctacgtgagttaactcacgttgaaaatgcacatgtgtgagttaacttacgctcg 37182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 45800248 - 45800318
Alignment:
Q  283 gttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatt-tgatggaaatgagaaaaa 352  Q
    ||||||||||||||| |||| |  |||||| |||||||| |||||||||||| ||| |||||| |||||||    
T  45800248 gttaactcacgctgagaatacatgtgcgtgggttaactctcgctcgactattatgacggaaattagaaaaa 45800318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 56210956 - 56211043
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagca 370  Q
    |||||||||||| |||||||| ||| | ||||||||||||||| ||  ||| ||||| |||||||||  |||||| ||||||||||||||    
T  56210956 agttaactcacgttgaaaatacacacgtgtgagttaactcacg-tcagctattttgacggaaatgag-caaaacatatgagagaagagca 56211043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 23811317 - 23811361
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgct 326  Q
    ||||||||||||||| || || || ||||||||||||||||||||    
T  23811317 agttaactcacgctgtaattaaacttgcgtgagttaactcacgct 23811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 367
Target Start/End: Complemental strand, 52204815 - 52204671
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||| ||||||   ||||||||||||||||  ||| ||| |||||||| |||| | ||||| |||||| |||||| | |||| | ||||||||||||    
T  52204815 tgtttttgctcattcttgtcctacgtgagttaacccacgctgaaaaatatatctacctgagttagctcacgttgaaaacacacatacatgagttaactca 52204716  T
Q  323 cgctcgactatttgatggaaatgagaaaaaacacatgagagaaga 367  Q
    |||||  |||||||| || ||||||  |||||| |||||||||||    
T  52204715 cgctcagctatttgacgggaatgagtgaaaacatatgagagaaga 52204671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 36703044 - 36703121
Alignment:
Q  218 tcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgct 295  Q
    |||| ||||||| |||||| ||||||||||||||||||||||| ||| | |||| |||||| | | ||||||||||||    
T  36703044 tcatatgtttttgctcattcccgtcctacgtgagttaattcacgctgaagaatacacctacgtgaattaactcacgct 36703121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 9144240 - 9144153
Alignment:
Q  208 tgcttttctttcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgct 295  Q
    |||| |||| ||||||||||||  ||||||||| | |||||||||||||| || |||||||||| || | ||| |||||| |||||||    
T  9144240 tgctcttctctcatctgtttttgttcatttccgccttacgtgagttaatttacgctggaaaatacacttgcatgagttaattcacgct 9144153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 18360111 - 18360154
Alignment:
Q  280 taagttaactcacgctgaaaatatacatgcgtgagttaactcac 323  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  18360111 taagttaactcacgctgaaaatacacctgcgtgagttaactcac 18360154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 36703076 - 36703162
Alignment:
Q  282 agttaactcacgctgaa-aatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaaga 367  Q
    |||||| |||||||||| |||| || | ||||| |||||||||||||||| |||| | ||||||||  ||||||| ||| |||||||    
T  36703076 agttaattcacgctgaagaatacacctacgtgaattaactcacgctcgacaatttaacggaaatgaacaaaaacagatgggagaaga 36703162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 20991646 - 20991593
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||||||||||||| |||| || || ||| ||||||||||||||| ||||||    
T  20991646 agttaactcacgctgacaatacacctgtgtgggttaactcacgctcggctattt 20991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 375
Target Start/End: Original strand, 33486894 - 33486987
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttat 375  Q
    |||||| |||||||||||||| || ||| | |||||||||||  ||| |||||||| |  |||||| ||||| | | |||||||||||| ||||    
T  33486894 agttaattcacgctgaaaatacacttgcataagttaactcacattcggctatttgacgagaatgagcaaaaatagacgagagaagagcaattat 33486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 35310404 - 35310457
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    ||||||||||| |||| |||| || || ||||||||||||||||||| ||||||    
T  35310404 agttaactcacactgagaatacacctgtgtgagttaactcacgctcggctattt 35310457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 40355955 - 40355903
Alignment:
Q  283 gttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||||||||||||||||| |  | | |||||||||||||||||| ||||||    
T  40355955 gttaactcacgctgaaaatacatctacatgagttaactcacgctcggctattt 40355903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 376
Target Start/End: Original strand, 33833356 - 33833519
Alignment:
Q  213 ttctttcatctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtg 312  Q
    |||| |||| ||||||| |||||||  ||| ||||||| |||| |||| ||  |||||| || ||  | |||||||||||| | |||||| || ||| ||    
T  33833356 ttctctcatatgtttttactcatttatgtcttacgtgaattaaatcacgctaaaaaatacacatatgtgagttaactcacgttaaaaatacacctgcatg 33833455  T
Q  313 agttaactcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatc 376  Q
    ||||||| |||||||| ||||||||  | |||||| ||||||| ||| |||||||||| |||||    
T  33833456 agttaacccacgctcggctatttgacaggaatgagtaaaaacagatgggagaagagcaattatc 33833519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 17793982 - 17793893
Alignment:
Q  266 aaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactatttgatggaaatgagaaaaaaca 355  Q
    |||||| ||||| ||||||||||||||||| |||||| ||||   |||||||||| |||||||||||||| | ||||||||  |||||||    
T  17793982 aaaatacacctatataagttaactcacgcttaaaatacacatatatgagttaacttacgctcgactatttaacggaaatgaataaaaaca 17793893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 17794109 - 17793993
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    ||||||||||  ||||||  | ||||| || |||||| | || ||| |||||| ||||| |||||||||||||||||||||||| || ||| ||| ||||    
T  17794109 catctgttttcactcattctcatcctatgttagttaacttacgctgaaaaatacacctatataagttaactcacgctgaaaatacacctgcatgaattaa 17794010  T
Q  319 ctcacgctcgactattt 335  Q
    || ||| ||||||||||    
T  17794009 cttacgttcgactattt 17793993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 223 - 367
Target Start/End: Original strand, 43294567 - 43294710
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaactca 322  Q
    ||||||| || |||||||| ||||||||||||| | |  ||| |||||| || ||| | | |||||||| | |||||||| |  | | ||||| ||||||    
T  43294567 tgtttttgcttatttccgttctacgtgagttaactaatgctg-aaaatacacttacgtgaattaactcatgttgaaaatacatctacatgagtcaactca 43294665  T
Q  323 cgctcgactatttgatggaaatgagaaaaaacacatgagagaaga 367  Q
    ||||| ||||||||| ||||||||| ||||||| |||||||||||    
T  43294666 cgctcaactatttgacggaaatgagtaaaaacagatgagagaaga 43294710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 44540754 - 44540663
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    |||||||||||| ||| |||| |||||||||| ||||||| | |||||||| ||||| || ||| || ||||||| ||||||||||||||||    
T  44540754 agttaactcacgttgagaatacacatgcgtgaattaactcgctctcgactattttgacgggaataagcaaaaacagatgagagaagagcagt 44540663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 377
Target Start/End: Original strand, 39555930 - 39556087
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacgctgaaaatatacatgcgtgagttaa 318  Q
    |||||||||||  |||||   |||||||||||||||| | || ||  |||||| |||||| | ||| |||||||  | ||| || |||||||||||||||    
T  39555930 catctgtttttgttcattcatgtcctacgtgagttaacttacgcta-aaaatacacctacgtgagtcaactcactttaaaattacacatgcgtgagttaa 39556028  T
Q  319 ctcacgctcgactatttgatggaaatgagaaaaaacacatgagagaagagcagttatca 377  Q
    ||||| ||||||||||||| || |||||| |||| || ||  ||||| |||| ||||||    
T  39556029 ctcacactcgactatttgacgggaatgagcaaaatcagataggagaaaagcaattatca 39556087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 6620097 - 6620006
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt-gatggaaatgagaaaaaacacatgagagaagagcagt 372  Q
    ||||||||||  | || |||| || ||| ||||||||||||||||| ||||||| || || |||||| ||||||| ||||||||||||||||    
T  6620097 agttaactcatacagagaatacacctgcatgagttaactcacgctcaactattttgacgggaatgagcaaaaacaaatgagagaagagcagt 6620006  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 370
Target Start/End: Original strand, 32016436 - 32016542
Alignment:
Q  266 aaaatatacctacataagttaactcacgctgaaaatatacatgcgtgag-ttaactcacgctcgacta-tttgatggaaatgagaaaaaacacatgagag 363  Q
    |||||| |||||| | |||||||||||| | |||||| || |||||||| |||||||||||| ||||| |||||||| || ||| ||||| | ||| |||    
T  32016436 aaaatacacctacgtgagttaactcacgttaaaaatacacctgcgtgagtttaactcacgctggactattttgatgggaacgagtaaaaatagatgggag 32016535  T
Q  364 aagagca 370  Q
    |||||||    
T  32016536 aagagca 32016542  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 8514076 - 8514003
Alignment:
Q  219 catctgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcac 292  Q
    ||||||||||| ||||||||||| ||||||||||||| | ||  || |||||| |||||| | |||||||||||    
T  8514076 catctgtttttgctcatttccgtactacgtgagttaaattacgttgaaaaatacacctacgtgagttaactcac 8514003  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 13387411 - 13387358
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgctcgactattt 335  Q
    |||||||||| | |||||||| |||| |||||||||||||||||| ||||||||    
T  13387411 agttaactcatgatgaaaatacacatacgtgagttaactcacgcttgactattt 13387358  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 44069935 - 44069891
Alignment:
Q  282 agttaactcacgctgaaaatatacatgcgtgagttaactcacgct 326  Q
    |||||||||||| |||||||| || ||||||||||||||||||||    
T  44069935 agttaactcacgttgaaaatacacctgcgtgagttaactcacgct 44069891  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 130688 - 130758
Alignment:
Q  223 tgtttttcctcatttccgtcctacgtgagttaattcacactggaaaatatacctacataagttaactcacg 293  Q
    ||||||| |||||||||||| |||||||||||| |||||||| |||||| |||| | | ||||||||||||    
T  130688 tgtttttactcatttccgtcttacgtgagttaactcacactgaaaaatacacctgcgtgagttaactcacg 130758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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