View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9098_low_24 (Length: 304)
Name: NF9098_low_24
Description: NF9098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9098_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 266
Target Start/End: Complemental strand, 23982726 - 23982472
Alignment:
| Q |
12 |
ataatactacttgttgcctagtggatttgatctaagtggtaaaaagacatgatttggatctaaattttttggatttgaactctacttttgtctttgaatg |
111 |
Q |
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| T |
23982726 |
ataatactacttgttgagtagtggatttggtctaagtggtaaaaagacatgatttggatctaaattttttggatttgaactctacttttgtctttgaatg |
23982627 |
T |
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| Q |
112 |
aagataaaattaaatttatttgtaagtgttttttgagtagcattagattgagttaagggcatcgttctctaatttcaaannnnnnnatcaaaaaagttac |
211 |
Q |
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| T |
23982626 |
aagataaaattaaatttatttgtaagtgtttttttagtagcattagattgagttaagggcatcgttccctaatctcaaatttttttatcaaaaaagatac |
23982527 |
T |
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| Q |
212 |
tttaatattgggaatgagagttgaagatataaaaatgataatattgacctctctc |
266 |
Q |
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| T |
23982526 |
tttaatatttggaatgagagttgaagatataaaaattatagtattgacctctctc |
23982472 |
T |
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