View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9100_low_1 (Length: 654)

Name: NF9100_low_1
Description: NF9100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9100_low_1
NF9100_low_1
[»] chr4 (84 HSPs)
chr4 (1-343)||(6133207-6133548)
chr4 (418-635)||(6133605-6133822)
chr4 (2-121)||(22802577-22802694)
chr4 (1-121)||(2891662-2891780)
chr4 (1-121)||(14787274-14787392)
chr4 (1-121)||(14789273-14789391)
chr4 (1-121)||(47563129-47563248)
chr4 (1-121)||(38928024-38928142)
chr4 (1-121)||(40091259-40091378)
chr4 (1-123)||(27499418-27499538)
chr4 (2-123)||(22800703-22800822)
chr4 (1-121)||(16453678-16453796)
chr4 (1-121)||(24446502-24446620)
chr4 (1-121)||(36921338-36921456)
chr4 (1-121)||(49088926-49089044)
chr4 (1-115)||(36919435-36919547)
chr4 (1-122)||(37089211-37089328)
chr4 (1-124)||(31849437-31849554)
chr4 (1-114)||(52942336-52942449)
chr4 (1-121)||(4215673-4215792)
chr4 (1-121)||(24889168-24889286)
chr4 (1-122)||(3824446-3824569)
chr4 (1-96)||(48486691-48486786)
chr4 (1-122)||(16455596-16455715)
chr4 (1-122)||(24879362-24879472)
chr4 (1-121)||(5101286-5101404)
chr4 (1-101)||(14633695-14633792)
chr4 (1-121)||(22046526-22046642)
chr4 (1-121)||(51015622-51015738)
chr4 (1-122)||(2484714-2484829)
chr4 (1-123)||(22044229-22044347)
chr4 (1-121)||(11006094-11006209)
chr4 (1-121)||(11008408-11008523)
chr4 (1-121)||(36380718-36380834)
chr4 (1-103)||(37312940-37313042)
chr4 (1-96)||(40637446-40637542)
chr4 (1-121)||(18409192-18409309)
chr4 (1-101)||(33415352-33415453)
chr4 (1-101)||(47210655-47210752)
chr4 (1-122)||(5635317-5635432)
chr4 (31-122)||(6765247-6765336)
chr4 (1-96)||(9148612-9148704)
chr4 (1-103)||(11435331-11435431)
chr4 (1-121)||(5198781-5198895)
chr4 (1-121)||(8631260-8631374)
chr4 (1-121)||(11437739-11437855)
chr4 (1-102)||(9176331-9176429)
chr4 (1-121)||(36378661-36378777)
chr4 (1-121)||(53405510-53405626)
chr4 (3-96)||(12395713-12395806)
chr4 (3-96)||(12400675-12400768)
chr4 (1-102)||(17662108-17662208)
chr4 (1-121)||(38890072-38890189)
chr4 (1-96)||(13547524-13547620)
chr4 (1-121)||(24348578-24348692)
chr4 (1-124)||(7941700-7941817)
chr4 (1-121)||(16931631-16931746)
chr4 (1-121)||(38409581-38409696)
chr4 (1-122)||(24880824-24880936)
chr4 (1-121)||(9173987-9174101)
chr4 (6-96)||(22134480-22134567)
chr4 (1-92)||(47275094-47275185)
chr4 (1-121)||(47868778-47868894)
chr4 (31-96)||(18534705-18534770)
chr4 (1-121)||(18709003-18709119)
chr4 (31-121)||(5664635-5664722)
chr4 (1-103)||(18847529-18847628)
chr4 (31-121)||(19323090-19323177)
chr4 (6-96)||(22132252-22132340)
chr4 (31-121)||(56030857-56030945)
chr4 (31-96)||(41997887-41997952)
chr4 (31-121)||(12102479-12102566)
chr4 (31-121)||(3937126-3937212)
chr4 (31-102)||(15032410-15032480)
chr4 (38-103)||(10113272-10113335)
chr4 (31-81)||(18537362-18537412)
chr4 (1-81)||(28454055-28454130)
chr4 (42-121)||(8756103-8756179)
chr4 (65-121)||(18311215-18311270)
chr4 (19-96)||(38270017-38270091)
chr4 (49-122)||(31983382-31983452)
chr4 (42-96)||(40998892-40998946)
chr4 (1-96)||(26085840-26085933)
chr4 (1-103)||(22782593-22782693)
[»] chr7 (62 HSPs)
chr7 (436-605)||(20599803-20599972)
chr7 (1-121)||(11355585-11355705)
chr7 (1-121)||(21678388-21678506)
chr7 (1-121)||(443924-444044)
chr7 (1-122)||(21680354-21680473)
chr7 (1-121)||(13099317-13099435)
chr7 (1-121)||(31434892-31435011)
chr7 (1-121)||(37411965-37412085)
chr7 (1-103)||(4295797-4295899)
chr7 (1-121)||(20297695-20297810)
chr7 (1-101)||(26804837-26804937)
chr7 (1-121)||(11759460-11759575)
chr7 (1-121)||(20299793-20299908)
chr7 (1-121)||(38394319-38394434)
chr7 (1-122)||(42330845-42330964)
chr7 (1-121)||(44724903-44725022)
chr7 (1-119)||(3036057-3036170)
chr7 (1-122)||(43253357-43253472)
chr7 (1-96)||(22251453-22251548)
chr7 (1-96)||(9679385-9679481)
chr7 (1-103)||(7471837-7471936)
chr7 (1-96)||(27306099-27306194)
chr7 (1-121)||(48457986-48458100)
chr7 (1-121)||(25542861-25542976)
chr7 (1-121)||(28485898-28486013)
chr7 (1-120)||(28487886-28488000)
chr7 (1-121)||(40836583-40836699)
chr7 (1-121)||(42223482-42223600)
chr7 (1-121)||(1606712-1606827)
chr7 (1-121)||(7469864-7469978)
chr7 (5-94)||(21990480-21990570)
chr7 (1-121)||(24465859-24465975)
chr7 (1-121)||(27832488-27832604)
chr7 (1-101)||(35962-36059)
chr7 (1-101)||(1850314-1850411)
chr7 (1-122)||(2935601-2935717)
chr7 (1-121)||(7188863-7188979)
chr7 (1-90)||(21592018-21592106)
chr7 (1-94)||(39145856-39145949)
chr7 (1-96)||(9681146-9681242)
chr7 (1-122)||(44897-45013)
chr7 (1-121)||(7094301-7094416)
chr7 (1-121)||(9027034-9027149)
chr7 (31-121)||(24748946-24749035)
chr7 (1-102)||(38396972-38397070)
chr7 (1-121)||(7351491-7351607)
chr7 (1-81)||(18345874-18345952)
chr7 (1-121)||(40946663-40946777)
chr7 (1-102)||(7092070-7092169)
chr7 (1-121)||(20626366-20626481)
chr7 (1-121)||(20630257-20630372)
chr7 (1-121)||(20642676-20642791)
chr7 (1-81)||(3878911-3878990)
chr7 (236-301)||(20599735-20599799)
chr7 (6-121)||(7349117-7349228)
chr7 (1-121)||(22394047-22394161)
chr7 (1-103)||(26295770-26295869)
chr7 (49-105)||(1046772-1046827)
chr7 (49-121)||(20136991-20137062)
chr7 (34-105)||(1049144-1049216)
chr7 (1-70)||(6349122-6349188)
chr7 (50-121)||(1502816-1502883)
[»] chr2 (42 HSPs)
chr2 (1-122)||(19007932-19008052)
chr2 (1-124)||(17849409-17849531)
chr2 (1-121)||(28196927-28197045)
chr2 (1-102)||(38020372-38020473)
chr2 (1-123)||(28459036-28459155)
chr2 (1-121)||(22707595-22707714)
chr2 (1-96)||(3022464-3022559)
chr2 (1-96)||(22162892-22162987)
chr2 (1-115)||(27105096-27105206)
chr2 (1-96)||(42923374-42923470)
chr2 (1-122)||(14837560-14837680)
chr2 (1-94)||(6258687-6258780)
chr2 (1-121)||(13909884-13910001)
chr2 (1-101)||(45279860-45279957)
chr2 (1-96)||(21520557-21520653)
chr2 (1-96)||(34979457-34979552)
chr2 (1-90)||(7462819-7462908)
chr2 (1-121)||(22287181-22287299)
chr2 (1-70)||(22407348-22407417)
chr2 (25-121)||(36560981-36561074)
chr2 (1-96)||(15539398-15539492)
chr2 (1-122)||(24162062-24162179)
chr2 (1-121)||(43623423-43623542)
chr2 (1-121)||(6263993-6264111)
chr2 (1-102)||(23871108-23871211)
chr2 (24-121)||(42453797-42453890)
chr2 (1-91)||(5375218-5375308)
chr2 (31-121)||(20592395-20592484)
chr2 (25-121)||(36558721-36558814)
chr2 (1-121)||(31732631-31732744)
chr2 (31-121)||(22874431-22874519)
chr2 (1-102)||(23452094-23452193)
chr2 (8-121)||(11739421-11739532)
chr2 (3-121)||(19504178-19504291)
chr2 (1-121)||(19501843-19501958)
chr2 (1-121)||(11577957-11578072)
chr2 (1-121)||(38414028-38414145)
chr2 (1-81)||(42064797-42064875)
chr2 (1-121)||(45332020-45332136)
chr2 (1-47)||(44288984-44289030)
chr2 (1-81)||(17848730-17848811)
chr2 (1-103)||(17897114-17897211)
[»] chr3 (80 HSPs)
chr3 (1-122)||(12267818-12267937)
chr3 (1-102)||(27635515-27635616)
chr3 (1-121)||(43423308-43423426)
chr3 (1-121)||(32219383-32219503)
chr3 (1-121)||(43421260-43421378)
chr3 (1-121)||(18096740-18096859)
chr3 (1-122)||(32263880-32263999)
chr3 (1-121)||(1313703-1313822)
chr3 (1-121)||(6484654-6484773)
chr3 (1-119)||(48361511-48361629)
chr3 (1-121)||(36012125-36012243)
chr3 (1-122)||(24980007-24980127)
chr3 (1-121)||(18099010-18099129)
chr3 (1-121)||(18162961-18163080)
chr3 (1-103)||(28181300-28181401)
chr3 (1-122)||(53915337-53915456)
chr3 (1-103)||(53917522-53917624)
chr3 (1-114)||(880302-880414)
chr3 (7-96)||(1626549-1626638)
chr3 (1-121)||(4308122-4308240)
chr3 (1-121)||(1321782-1321897)
chr3 (1-119)||(5926611-5926726)
chr3 (1-121)||(10955867-10955981)
chr3 (1-121)||(10958163-10958277)
chr3 (1-122)||(15781175-15781294)
chr3 (1-103)||(45883239-45883341)
chr3 (1-115)||(47701526-47701635)
chr3 (1-121)||(51674608-51674727)
chr3 (1-90)||(51943669-51943758)
chr3 (1-96)||(3314981-3315077)
chr3 (1-117)||(27101026-27101140)
chr3 (1-101)||(43228589-43228687)
chr3 (1-96)||(53468319-53468414)
chr3 (1-102)||(5191954-5192052)
chr3 (1-121)||(25533728-25533842)
chr3 (1-121)||(50494302-50494417)
chr3 (1-121)||(54691417-54691534)
chr3 (1-121)||(5886500-5886618)
chr3 (1-121)||(5899973-5900091)
chr3 (2-121)||(43226381-43226495)
chr3 (1-92)||(53591479-53591570)
chr3 (1-122)||(9604446-9604564)
chr3 (1-102)||(10084245-10084343)
chr3 (1-102)||(10191168-10191266)
chr3 (1-121)||(25389209-25389326)
chr3 (1-114)||(25688005-25688119)
chr3 (1-102)||(53893910-53894009)
chr3 (1-122)||(3307056-3307177)
chr3 (1-121)||(11168404-11168519)
chr3 (31-121)||(31151667-31151754)
chr3 (1-121)||(42990602-42990717)
chr3 (1-115)||(880090-880203)
chr3 (1-121)||(23633747-23633862)
chr3 (9-121)||(6232103-6232208)
chr3 (1-62)||(47148795-47148856)
chr3 (1-121)||(28101848-28101963)
chr3 (1-121)||(456211-456325)
chr3 (1-121)||(458588-458702)
chr3 (1-121)||(747061-747177)
chr3 (1-121)||(41849356-41849470)
chr3 (1-103)||(4666810-4666912)
chr3 (1-82)||(26720850-26720929)
chr3 (1-121)||(28761287-28761402)
chr3 (1-121)||(38210674-38210789)
chr3 (1-101)||(38890343-38890441)
chr3 (1-121)||(3859813-3859930)
chr3 (31-122)||(17795581-17795670)
chr3 (31-122)||(19104021-19104110)
chr3 (1-121)||(51726847-51726961)
chr3 (1-102)||(561640-561737)
chr3 (25-102)||(7606459-7606536)
chr3 (1-43)||(39715762-39715804)
chr3 (1-58)||(8183040-8183097)
chr3 (1-121)||(10621366-10621483)
chr3 (31-129)||(4103728-4103822)
chr3 (31-121)||(42992712-42992799)
chr3 (1-121)||(6065633-6065749)
chr3 (1-81)||(11170673-11170752)
chr3 (1-121)||(22114143-22114258)
chr3 (1-121)||(28412870-28412984)
[»] chr5 (62 HSPs)
chr5 (1-121)||(41585580-41585698)
chr5 (1-117)||(17818338-17818453)
chr5 (1-121)||(26098129-26098249)
chr5 (1-120)||(12555757-12555876)
chr5 (1-105)||(2724209-2724313)
chr5 (2-121)||(10474168-10474285)
chr5 (1-121)||(37705626-37705745)
chr5 (1-122)||(658203-658321)
chr5 (1-103)||(31465849-31465952)
chr5 (4-121)||(34530559-34530674)
chr5 (1-103)||(40221845-40221947)
chr5 (1-94)||(20045302-20045395)
chr5 (1-96)||(1189475-1189570)
chr5 (1-121)||(4236951-4237065)
chr5 (1-121)||(17073203-17073321)
chr5 (1-121)||(36208889-36209007)
chr5 (1-122)||(38882411-38882526)
chr5 (1-115)||(21289075-21289187)
chr5 (1-121)||(18469332-18469448)
chr5 (1-96)||(21948348-21948445)
chr5 (1-121)||(36402170-36402289)
chr5 (1-121)||(2175224-2175341)
chr5 (1-105)||(25804347-25804448)
chr5 (1-96)||(2954730-2954826)
chr5 (1-96)||(6747622-6747720)
chr5 (1-96)||(20505710-20505808)
chr5 (1-121)||(10528937-10529054)
chr5 (1-103)||(16776477-16776578)
chr5 (1-121)||(18467007-18467123)
chr5 (1-121)||(18511056-18511174)
chr5 (1-96)||(2818200-2818296)
chr5 (1-96)||(6745386-6745484)
chr5 (1-96)||(6756808-6756904)
chr5 (1-92)||(20043305-20043397)
chr5 (1-81)||(26098047-26098127)
chr5 (3-121)||(31179213-31179326)
chr5 (1-121)||(10587138-10587252)
chr5 (31-121)||(27910784-27910872)
chr5 (1-103)||(18596961-18597063)
chr5 (1-121)||(39798353-39798468)
chr5 (1-122)||(21684293-21684408)
chr5 (1-96)||(25921337-25921429)
chr5 (1-119)||(27912859-27912973)
chr5 (1-121)||(34476894-34477009)
chr5 (1-121)||(3372977-3373093)
chr5 (1-80)||(18509201-18509280)
chr5 (1-122)||(38959971-38960087)
chr5 (1-122)||(39854802-39854922)
chr5 (1-120)||(6661038-6661151)
chr5 (1-121)||(696191-696310)
chr5 (1-90)||(25904419-25904508)
chr5 (1-102)||(34479275-34479374)
chr5 (1-95)||(16092069-16092162)
chr5 (1-121)||(24127172-24127291)
chr5 (1-121)||(15552569-15552685)
chr5 (1-121)||(10750022-10750137)
chr5 (1-121)||(10757498-10757613)
chr5 (34-122)||(20054182-20054267)
chr5 (1-53)||(39397916-39397968)
chr5 (1-102)||(4410345-4410442)
chr5 (1-96)||(31543057-31543149)
chr5 (49-121)||(31472458-31472529)
[»] chr1 (76 HSPs)
chr1 (1-121)||(50078635-50078754)
chr1 (1-121)||(2949079-2949197)
chr1 (1-126)||(18839904-18840027)
chr1 (1-121)||(4131221-4131340)
chr1 (1-123)||(50248415-50248535)
chr1 (1-121)||(17319203-17319321)
chr1 (1-96)||(14097838-14097934)
chr1 (2-121)||(47451948-47452065)
chr1 (1-115)||(11457328-11457440)
chr1 (1-119)||(25251123-25251239)
chr1 (1-121)||(3579431-3579548)
chr1 (1-122)||(27336781-27336903)
chr1 (1-121)||(6995540-6995658)
chr1 (1-121)||(23816206-23816323)
chr1 (1-121)||(47906587-47906704)
chr1 (1-122)||(39932398-39932515)
chr1 (1-118)||(9240937-9241052)
chr1 (1-95)||(17324390-17324484)
chr1 (1-121)||(28206912-28207031)
chr1 (1-121)||(25248398-25248516)
chr1 (1-121)||(27338973-27339094)
chr1 (1-121)||(31490228-31490345)
chr1 (1-129)||(30780362-30780490)
chr1 (1-123)||(12302347-12302470)
chr1 (1-96)||(13215400-13215495)
chr1 (1-121)||(13447117-13447231)
chr1 (1-102)||(15294694-15294792)
chr1 (1-103)||(31424878-31424980)
chr1 (1-121)||(39462837-39462956)
chr1 (1-121)||(50307389-50307508)
chr1 (1-121)||(18307425-18307543)
chr1 (1-103)||(51750362-51750461)
chr1 (1-121)||(10399669-10399786)
chr1 (9-121)||(31735365-31735472)
chr1 (1-121)||(46431548-46431663)
chr1 (5-121)||(51757862-51757973)
chr1 (1-121)||(13762159-13762275)
chr1 (31-121)||(14183455-14183542)
chr1 (7-121)||(16429277-16429387)
chr1 (1-96)||(28998117-28998215)
chr1 (1-96)||(29003833-29003931)
chr1 (1-122)||(9459276-9459392)
chr1 (1-122)||(9463103-9463219)
chr1 (1-122)||(15916706-15916822)
chr1 (1-130)||(40134260-40134387)
chr1 (1-96)||(2617840-2617933)
chr1 (480-633)||(47944911-47945064)
chr1 (31-121)||(30790250-30790337)
chr1 (19-102)||(2510202-2510284)
chr1 (1-103)||(15823865-15823968)
chr1 (1-121)||(23786162-23786278)
chr1 (1-96)||(25860276-25860367)
chr1 (1-121)||(31422706-31422825)
chr1 (1-96)||(38925351-38925448)
chr1 (1-121)||(20291779-20291894)
chr1 (1-121)||(16226491-16226607)
chr1 (1-103)||(16432705-16432805)
chr1 (1-121)||(41647236-41647355)
chr1 (25-121)||(24326008-24326101)
chr1 (1-122)||(16231886-16232003)
chr1 (1-118)||(18800426-18800538)
chr1 (1-121)||(20302764-20302879)
chr1 (5-121)||(51752696-51752805)
chr1 (31-121)||(8348905-8348991)
chr1 (31-121)||(17185979-17186067)
chr1 (1-121)||(47177685-47177801)
chr1 (1-76)||(50076563-50076638)
chr1 (1-121)||(43104503-43104615)
chr1 (1-117)||(17324482-17324598)
chr1 (1-121)||(28842817-28842931)
chr1 (1-121)||(47180036-47180152)
chr1 (1-81)||(28841002-28841080)
chr1 (35-83)||(15669279-15669327)
chr1 (1-78)||(16428968-16429043)
chr1 (31-77)||(26519328-26519373)
chr1 (1-121)||(13358896-13359011)
[»] chr6 (42 HSPs)
chr6 (1-121)||(15367380-15367498)
chr6 (1-121)||(11982872-11982989)
chr6 (1-121)||(24338295-24338413)
chr6 (1-121)||(9020280-9020398)
chr6 (1-121)||(15346695-15346813)
chr6 (1-121)||(3631784-3631902)
chr6 (1-121)||(3629711-3629830)
chr6 (1-124)||(1069560-1069681)
chr6 (1-121)||(28241163-28241277)
chr6 (1-103)||(30728685-30728787)
chr6 (1-96)||(14507040-14507132)
chr6 (1-103)||(4816087-4816186)
chr6 (1-124)||(19704400-19704521)
chr6 (1-121)||(15530003-15530125)
chr6 (25-122)||(29754548-29754642)
chr6 (1-121)||(26065337-26065457)
chr6 (1-121)||(26085306-26085426)
chr6 (1-96)||(3394718-3394814)
chr6 (1-121)||(26065961-26066077)
chr6 (1-121)||(26068235-26068351)
chr6 (1-121)||(17012387-17012502)
chr6 (1-122)||(33311483-33311599)
chr6 (1-92)||(3233594-3233686)
chr6 (1-121)||(33309214-33309329)
chr6 (1-103)||(1230105-1230205)
chr6 (1-121)||(5273055-5273172)
chr6 (1-121)||(26932403-26932518)
chr6 (1-121)||(25480229-25480346)
chr6 (1-121)||(2628727-2628842)
chr6 (34-117)||(14466706-14466787)
chr6 (34-103)||(18322482-18322550)
chr6 (1-121)||(12195354-12195470)
chr6 (1-103)||(20915213-20915312)
chr6 (1-121)||(32280348-32280463)
chr6 (1-121)||(3027703-3027817)
chr6 (49-121)||(8717195-8717264)
chr6 (49-121)||(13057589-13057659)
chr6 (1-119)||(22490964-22491077)
chr6 (1-62)||(14458663-14458723)
chr6 (1-103)||(26945495-26945594)
chr6 (38-102)||(19696825-19696887)
chr6 (65-121)||(10584358-10584413)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-121)||(50339-50457)
scaffold0005 (1-121)||(52338-52456)
scaffold0005 (1-101)||(183500-183597)
[»] chr8 (45 HSPs)
chr8 (1-102)||(30480365-30480466)
chr8 (1-121)||(15073084-15073202)
chr8 (1-105)||(14808133-14808237)
chr8 (1-121)||(28251410-28251528)
chr8 (1-121)||(15068354-15068472)
chr8 (2-122)||(33541254-33541372)
chr8 (1-121)||(35872301-35872419)
chr8 (1-92)||(36865911-36866002)
chr8 (1-96)||(41383036-41383131)
chr8 (1-124)||(13858331-13858450)
chr8 (1-96)||(37214132-37214227)
chr8 (1-103)||(43530494-43530593)
chr8 (1-121)||(3874372-3874487)
chr8 (1-121)||(14419035-14419153)
chr8 (9-121)||(14477630-14477740)
chr8 (1-121)||(18811086-18811202)
chr8 (1-121)||(27827364-27827479)
chr8 (1-121)||(22684491-22684609)
chr8 (1-121)||(25952892-25953010)
chr8 (1-122)||(27829675-27829791)
chr8 (1-121)||(3883436-3883551)
chr8 (1-121)||(4424397-4424512)
chr8 (1-122)||(18813260-18813377)
chr8 (1-121)||(28283062-28283177)
chr8 (1-122)||(15809597-15809712)
chr8 (1-121)||(609114-609230)
chr8 (1-103)||(27911451-27911551)
chr8 (1-103)||(27957870-27957970)
chr8 (1-102)||(31162584-31162683)
chr8 (31-96)||(27106770-27106835)
chr8 (1-53)||(181849-181901)
chr8 (31-121)||(2467979-2468066)
chr8 (31-121)||(3005486-3005572)
chr8 (34-121)||(15956358-15956443)
chr8 (1-121)||(32339688-32339803)
chr8 (1-96)||(44721222-44721314)
chr8 (1-123)||(5372023-5372145)
chr8 (31-121)||(15185564-15185652)
chr8 (1-103)||(43082352-43082451)
chr8 (1-62)||(41385118-41385180)
chr8 (31-121)||(21482708-21482798)
chr8 (34-122)||(24873038-24873124)
chr8 (41-118)||(1225567-1225644)
chr8 (1-103)||(43079981-43080080)
chr8 (31-121)||(21480900-21480990)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-121)||(14231-14347)
scaffold0131 (66-118)||(15386-15436)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-121)||(41325-41439)
[»] scaffold1674 (1 HSPs)
scaffold1674 (1-119)||(1294-1407)
[»] scaffold0370 (1 HSPs)
scaffold0370 (1-104)||(1308-1408)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-115)||(85554-85667)
[»] scaffold0011 (1 HSPs)
scaffold0011 (9-115)||(35928-36033)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-96)||(80186-80282)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-103)||(79512-79615)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-122)||(69132-69248)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-121)||(1493-1606)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-122)||(29502-29617)
[»] scaffold0127 (1 HSPs)
scaffold0127 (4-121)||(12715-12827)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-92)||(4319-4410)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-121)||(357-473)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-120)||(11315-11434)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-121)||(6531-6646)
[»] scaffold0891 (1 HSPs)
scaffold0891 (1-102)||(4535-4633)
[»] scaffold0057 (1 HSPs)
scaffold0057 (31-121)||(16501-16587)
[»] scaffold0250 (1 HSPs)
scaffold0250 (34-118)||(3243-3322)


Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 6133207 - 6133548
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  6133207 ttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattccttgctccacacatcaagtttgttattggtgtaatt 6133306  T
Q  101 ttttccatcgaattcacaacaggaatgttacatttatttgcatattttgaattgacaccaaggctactttgtcacgaattgagccgcttcctcgctgtac 200  Q
    |||||||||||||||||||| | ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6133307 ttttccatcgaattcacaactgtaatgttacatttatttgcatat---gaattgacaccaaggctactttgtcacgaattgagccacttcctcgctgtac 6133403  T
Q  201 tcgtgcgtgattaattaataccttatgaaacacgcatcatagtaatatataattatatattgctaaccaacaatagcttctccccac-aaaacgctagtc 299  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6133404 tcgtgcgtgattaattaataccttatgaagcacgcatcatagaaatatataattatatattgctaaccaacaatagcttctccccacaaaaacactagtc 6133503  T
Q  300 ttt-gactcttacaaacaccaactcacactcagaatcaacaccat 343  Q
    |||  ||||||||||||||||||||||||||||||||||||||||    
T  6133504 tttaaactcttacaaacaccaactcacactcagaatcaacaccat 6133548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 418 - 635
Target Start/End: Original strand, 6133605 - 6133822
Alignment:
Q  418 tatattgcttctctttgactcttaccttcatgaactgatcatcatattagaatggaatcaacacctgattttgtgaaaagggtgcttagagaagcgcttg 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6133605 tatattgcttctctttgactcttaccttcatgaactgatcatcatattagaatggaatcaacacctgattttgtgaaaagggtgcttagagaagcgcttg 6133704  T
Q  518 gtgatgacgttagcgatttcaaactactggtatttgcagttcatgcttttattcttgaatcagggtttattcgtgtggatcgcgtttcgggtgtgaagat 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6133705 gtgatgacgttagcgatttcaaactactggtatttgcagttcatgcttttattcttgaatcagggtttattcgtgtggatcgcgtttcgggtgtgaagat 6133804  T
Q  618 tagttcctctcatcttat 635  Q
    ||||||||||||||||||    
T  6133805 tagttcctctcatcttat 6133822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 22802694 - 22802577
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| ||||    
T  22802694 tttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattt 22802595  T
Q  102 tttccatcgaattcacaaca 121  Q
    ||  ||||||||||||||||    
T  22802594 tt--catcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2891662 - 2891780
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||| |||||||||| |||||||||||||| |||    
T  2891662 ttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattattctttgctccacacatcaagtttgttattggtgtgatt 2891761  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  2891762 ttt--catcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14787392 - 14787274
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  14787392 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 14787293  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  14787292 ttt--catcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14789391 - 14789273
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  14789391 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 14789292  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  14789291 ttt--catcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47563129 - 47563248
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||  ||    
T  47563129 ttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggtt 47563228  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | |||| |||||||||||    
T  47563229 ttct-catcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38928142 - 38928024
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  38928142 ttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 38928043  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  38928042 ttt--catcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40091378 - 40091259
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| | ||||| |||||||||| |||||||||||||| | |    
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaat 40091279  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||||||||| |||||    
T  40091278 tttt-catcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 27499418 - 27499538
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||| |||||  ||||| |||||||||| |||||||||||||| |||    
T  27499418 ttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttggttattcattgctccacacatcaagtttgttattggtgtgatt 27499517  T
Q  101 ttttccatcgaattcacaacagg 123  Q
    |||  ||||||||||| ||||||    
T  27499518 ttt--catcgaattcagaacagg 27499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 22800822 - 22800703
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| |||  |||||| | |||||||| |||||||||||||| ||||    
T  22800822 tttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgattt 22800723  T
Q  102 tttccatcgaattcacaacagg 123  Q
    ||  |||||||||| |||||||    
T  22800722 tt--catcgaattcgcaacagg 22800703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16453678 - 16453796
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||| |||| |||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  16453678 ttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatt 16453777  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  16453778 ttt--catcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24446620 - 24446502
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||  ||| ||||||||||||| ||||||||||||||   |    
T  24446620 ttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtttgttattggtgt--gt 24446523  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  24446522 tttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 36921456 - 36921338
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  36921456 ttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatt 36921357  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  36921356 ttt--catcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 49088926 - 49089044
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||  ||| ||  ||||||||| |||||||||||||| |||    
T  49088926 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtttgttattggtgtgatt 49089025  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  49089026 ttt--catcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36919547 - 36919435
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  36919547 ttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatt 36919448  T
Q  101 ttttccatcgaattc 115  Q
    |||  ||||||||||    
T  36919447 ttt--catcgaattc 36919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37089328 - 37089211
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||   ||||| |||||||||| |||||||||||||| |||    
T  37089328 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttgttattggtgtgatt 37089231  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||| ||||||    
T  37089230 ttt--catcgaattcgcaacag 37089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 31849554 - 31849437
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  31849554 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 31849458  T
Q  101 ttttccatcgaattcacaacagga 124  Q
    ||   |||||||||| ||||||||    
T  31849457 tt---catcgaattcgcaacagga 31849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52942449 - 52942336
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||| |||| || |||||||||||||||||||| |||| ||    
T  52942449 ttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgat 52942350  T
Q  100 tttttccatcgaatt 114  Q
    ||||| |||||||||    
T  52942349 ttttt-catcgaatt 52942336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4215673 - 4215792
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||  |||||||||||||| ||||||||||||||| || |||||||| |||| | |    
T  4215673 ttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattattccttgcttcacacatc-aagttgttatttgtgtgagt 4215771  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  4215772 tttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24889168 - 24889286
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||| |||||| |||||||| || ||||||||||||| ||     
T  24889168 ttttctacttttggcttgtgattataattgttccatacactttgttttggttgttagattattccttgctccacacatc-aagttgttattggtgtgata 24889266  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||||||||| |||||    
T  24889267 tttt-catcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3824569 - 3824446
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    |||||||||||| ||||||||||| ||| ||||||||||| |||| ||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  99 ttttttccatcgaattcacaacag 122  Q
    |||||  |||||||||||||||||    
T  3824469 tttttctcatcgaattcacaacag 3824446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48486691 - 48486786
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||  |||| | ||| |||||||||||||||||||||    
T  48486691 ttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgt 48486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16455596 - 16455715
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| |||| |||| || || ||| ||||||||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  16455596 ttttctagttttagcttatgattataactgttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatt 16455695  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  16455696 ttt--catcgaattcacaacag 16455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24879362 - 24879472
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||          |||||||| ||||||||||||||  ||    
T  24879362 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatt----------cacatcaagtttgttattggtgtggtt 24879451  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||| |||||||||||||||||    
T  24879452 tttt-catcgaattcacaacag 24879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5101286 - 5101404
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| |||  |||| | |||||||||| ||||||||||||||   |    
T  5101286 ttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgt--gt 5101383  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  5101384 tttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14633695 - 14633792
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  14633695 ttttctacttttggcttgtattt--aattgttccatacattttgtttcggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 14633791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22046642 - 22046526
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| | |    
T  22046642 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga-t 22046547  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| |||||||||||||||    
T  22046546 ttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51015622 - 51015738
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||  ||    
T  51015622 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt-gtt 51015717  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| | |||||||||||||    
T  51015718 ttttcgaacgaattcacaaca 51015738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2484829 - 2484714
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  2484829 ttttctacttttggcttgtattt--aattgttccatacactttattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 2484733  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||||||||||    
T  2484732 tt---catcgaattcacaacag 2484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22044347 - 22044229
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| | |    
T  22044347 ttttctacttttggcttgtattt--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtta-t 22044252  T
Q  101 ttttccatcgaattcacaacagg 123  Q
    ||||| ||| |||||||||||||    
T  22044251 ttttcgatcaaattcacaacagg 22044229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11006209 - 11006094
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||   |    
T  11006209 ttttctactttttgcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt--gt 11006115  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| |||||||||||||||    
T  11006114 ttttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11008523 - 11008408
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||   |    
T  11008523 ttttctactttttgcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt--gt 11008429  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| |||||||||||||||    
T  11008428 ttttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36380718 - 36380834
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||| ||| ||| || |||||||||||| | |||||||||| |||    
T  36380718 ttttctacttttggcttgtgtttataattgtttcatacactttgttt-gattgcttgatcattacttactccacacatcaaatattttattggtgtgatt 36380816  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||| ||||||    
T  36380817 tt---catcgaattgacaaca 36380834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37313042 - 37312940
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| || || |||||||| |||||||||||||| |||||||||| |||  |||||| |||||||||| ||| |||||||||| |||    
T  37313042 ttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtgatt 37312943  T
Q  101 ttt 103  Q
    |||    
T  37312942 ttt 37312940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40637446 - 40637542
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||||||||||| || ||||||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| || |||||||||||||    
T  40637446 ttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttgctccacacatc-aagttgttattggtgt 40637542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18409309 - 18409192
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| |||||| || ||| |  |||||||||||||||| |||||||||| |||  |||||| |||||||||| ||| |||||||||| |||    
T  18409309 ttttctacttttgtcttgtgattataact--tccatacactttgttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatt 18409212  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  18409211 tttt-catcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33415453 - 33415352
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||||||| |||  |||||| |||||||||| ||||||||| |||| ||    
T  33415453 ttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgat 33415354  T
Q  100 tt 101  Q
    ||    
T  33415353 tt 33415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47210752 - 47210655
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||| ||||| ||||||| |||||||| || ||||||||||||| |||    
T  47210752 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgctttattatctcttgctccacacatc-aagttgttattggtgtgatt 47210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5635432 - 5635317
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || ||||||||||||| |||    
T  5635432 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgattgattatcccttgctccacacatc-aagttgttattggtgtgatt 5635336  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  5635335 tt---catcgaattcgcaacag 5635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 6765247 - 6765336
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    ||||||||||||||||| ||||||||||||||  ||| || |||||||||| |||||||||||||| ||||||  |||||||||||||||||    
T  6765247 ttccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgattttt--catcgaattcacaacag 6765336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9148612 - 9148704
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||| | |||||||| || |||||||||||||    
T  9148612 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgttccacacatc-aagttgttattggtgt 9148704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11435331 - 11435431
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||  |||||||||||||| ||||||| |||||||| || ||||||||||||| ||    
T  11435331 ttttctacttttggcttgtattt--aattgttccatacactttgtttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgat 11435427  T
Q  100 tttt 103  Q
    ||||    
T  11435428 tttt 11435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5198781 - 5198895
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || || |||||||||| |||    
T  5198781 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatccattgctccacacatc-aagttattattggtgtgatt 5198877  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  5198878 tt---catcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 8631374 - 8631260
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||  |||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  8631374 ttttctacttttggcttgtattt--aattgttccatacactttgttttagttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 8631278  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  8631277 tt---catcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11437739 - 11437855
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| || ||||||||||| ||||||| || ||||| || ||||||||||||| ||    
T  11437739 ttttctacttttggcttgtattt--aattgttccatacactttgtttttggctgcttgattatctcttgctccatacatc-aagttgttattggtgtgat 11437835  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  11437836 tttt--catcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9176429 - 9176331
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  9176429 ttttctacttttggcttgtattt--aattattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 9176333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36378661 - 36378777
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| | |||||||| |||||||| |||||||||||||| ||||||||||||||| |||||| |||| ||||| | | |||||||||| |||    
T  36378661 ttttctacttttcgtttgtgtttataattgtttcatacactttgttt-ggttgcttgattattacttgctccacatatcaagtattttattggtgtgatt 36378759  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  36378760 tt---catcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 53405510 - 53405626
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||| ||||||| ||||||||||||||  |||||| |||||||||| ||| |||||||||| |||    
T  53405510 ttttctacttttggcttgtatttataact--tccatacattttgttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgatt 53405607  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  53405608 ttt--catcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 12395806 - 12395713
Alignment:
Q  3 ttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||| ||||| ||| |||| |||||||| |||||| |||||||  |||||| |||||||||| ||||||||||||||    
T  12395806 ttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgt 12395713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 12400768 - 12400675
Alignment:
Q  3 ttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||| ||||| ||| |||| |||||||| |||||| |||||||  |||||| |||||||||| ||||||||||||||    
T  12400768 ttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgt 12400675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17662208 - 17662108
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||| |||| || |||||||||||||||||||| || | ||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  17662208 ttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 17662110  T
Q  101 tt 102  Q
    ||    
T  17662109 tt 17662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38890189 - 38890072
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||| ||||||||| ||| |  |||||||||||||||| ||||||| ||||||| |||||| |||| ||||||| | |||||||||| |||    
T  38890189 ttttctaattttgccttgtgtttataact--tccatacactttgttt-ggttgctagattattccttgctccacatatcaaatattttattggtgtgatt 38890093  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||  |||||||||||||||    
T  38890092 ttttttatcgaattcacaaca 38890072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13547524 - 13547620
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||  | |||||  |||| | |||||||||| ||||||||||||||    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgt 13547620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24348578 - 24348692
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||||||| |||  | |||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  24348578 ttttctatttttggcttgtattt--agttgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 24348674  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  24348675 tt---catcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7941700 - 7941817
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||| |||||  |||||| |||||||| || ||||| ||||||| |||    
T  7941700 ttttctacttttgccttgtatttc--attgttccatacactttgttttggttgcttaattatcccttgctccacacatc-aagttgttgttggtgtgatt 7941796  T
Q  101 ttttccatcgaattcacaacagga 124  Q
    ||   |||||||||| ||||||||    
T  7941797 tt---catcgaattcgcaacagga 7941817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16931746 - 16931631
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| |||||  |||||| |||||||  || ||||||||||||| |||    
T  16931746 ttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatcccttgctccacacat-taagttgttattggtgtgatt 16931650  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  16931649 ttt--catcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38409581 - 38409696
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||| |||||||  |||||||||||||  |||||| |||||||| || |||||||||||||   |    
T  38409581 ttttctacttttggcttgtattt--aattgttccatacaatttgttttagttgcttgattatcccttgctccacacatc-aagttgttattggtgt--gt 38409675  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| || ||||||||||||    
T  38409676 ttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24880824 - 24880936
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactt--tgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    ||||||||||||||||||||||| |||||||||| |||||||  ||||| |||||||||||||||          |||||||| ||||||||||||||      
T  24880824 ttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattatt----------cacatcaagtttgttattggtgtgg 24880913  T
Q  99 ttttttccatcgaattcacaacag 122  Q
    |||||| |||||||||||||||||    
T  24880914 tttttt-catcgaattcacaacag 24880936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9174101 - 9173987
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||| || |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||| |||| |||    
T  9174101 ttttctacttttggcttgtattt--aattatttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattagtgtgatt 9174005  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  9174004 tt---catcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 22134567 - 22134480
Alignment:
Q  6 tacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || |||||||||||||    
T  22134567 tacttttggcttgtattt--aattgttccatacactttgttttggttgtttgattatcccttgctccacacatc-aagttgttattggtgt 22134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47275094 - 47275185
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattg 92  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||  ||| | ||||||||||||  ||| || |||||||||| ||||||||||    
T  47275094 ttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttattg 47275185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47868778 - 47868894
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  | |||||||||||||||||| ||| |||||| |||||||  |||||| |||||||| || ||||||||||||| ||    
T  47868778 ttttctacttttggcttgtatt--ttattgttccatacactttgattttggttgcctgattatcccttgctccacacatc-aagttgttattggtgtgat 47868874  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  47868875 tttt--catcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 18534770 - 18534705
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||| | | ||||||||||    
T  18534770 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattggtgt 18534705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18709119 - 18709003
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||| ||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||  ||    
T  18709119 ttttctactattggcttgtatttataacttt--catacactttgttttggttgcttgattatgccttgctccacacatc-aagttgttattggtgtggtt 18709023  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||| |||||||||||    
T  18709022 tttt-catcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 5664635 - 5664722
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| | | || |||||||||| | | |||||||||| |||||   ||||||||||||||||    
T  5664635 ttccatacactttgttttggttgcttgattattaccttctccacacatcaagtattttattggtgtgatttt---catcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18847529 - 18847628
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  |||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  18847529 ttttctactttttggcttgtattt--aattattccatacactttgttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 18847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 19323090 - 19323177
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||| |||  |||||||||||||| |||||| |||||||||| | | |||||||||| |||||   ||||||||||||||||    
T  19323090 ttccatacactttattttagttgcttgattattacttgctccacacatcaagtattttattggtgtgatttt---catcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 22132340 - 22132252
Alignment:
Q  6 tacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  22132340 tacttttggcttgtattt--aattgttccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 22132252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 56030857 - 56030945
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| |||||| ||| ||| ||||||| |||| ||||| ||| |||||||||| ||||||  |||||||||| |||||    
T  56030857 ttccatacactttgttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgattttt--catcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 41997887 - 41997952
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||| ||||||||||||||  ||| || |||||||||| ||| ||||||||||    
T  41997887 ttccatacactttgttttggttgcttgattatcactttctccacacatcaagtttattattggtgt 41997952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 12102479 - 12102566
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||| | ||||| |||||| |||||||||| |   |||||||||| |||||   ||||||||||||||||    
T  12102479 ttccatacactttgttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtgatttt---catcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 3937212 - 3937126
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||  |||||| | |||||| || ||||||||||||| ||||||  |||||||||| |||||    
T  3937212 ttccatacactttgttt-ggttgcttgattatcccttgctcctcacatc-aagttgttattggtgtgattttt--catcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 15032480 - 15032410
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 102  Q
    ||||||||||||||||| ||||||||||||||| |||||| | |||||||| | | |||||||||| |||||    
T  15032480 ttccatacactttgttt-ggttgcttgattattacttgctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 10113272 - 10113335
Alignment:
Q  38 cactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttt 103  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||| | |||||||||| ||||||    
T  10113272 cactttgttttggttgcttgattatt--ttgctccacacatcaaatattttattggtgtgattttt 10113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 18537412 - 18537362
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    ||||||||||||||||| | ||||||||||||| |||||| ||||||||||    
T  18537412 ttccatacactttgttttgattgcttgattattacttgctccacacatcaa 18537362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28454055 - 28454130
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    ||||||||||||| ||||||||| |||||||  ||| |||||||||| |||| ||||||||||  ||||||||||||||||    
T  28454055 ttttctacttttg-cttgtgtttataattgt--catccactttgttttggtttcttgattatt--ttgcttcacacatcaa 28454130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 8756179 - 8756103
Alignment:
Q  42 ttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||| ||||||||||||||| |||||| |||||||||| | | |||||| ||| |||||   ||||||||||||||||    
T  8756179 ttgttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgatttt---catcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 18311270 - 18311215
Alignment:
Q  65 cttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||| |||||||||| ||| |||||||||| |||||||| |||||||||||||||    
T  18311270 cttgctccacacatcaagtttattattggtgtgattttttc-atcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 38270091 - 38270017
Alignment:
Q  19 tgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||| ||||||||||||||   |||||| |||||||||| |||  ||| || |||||||||| ||||||||||||||    
T  38270091 tgtttataattgttccatac---ttgttttggttgcttgactatcccttactccacacatcaagtttgttattggtgt 38270017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 31983452 - 31983382
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    ||||||||||||||||  |||| |||||||||||| | |||||| ||| ||||||| ||||||||| |||||||    
T  31983452 ggttgcttgattattt--tgctccacacatcaaatattttattgatgtgatttttt-catcgaatttacaacag 31983382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 40998946 - 40998892
Alignment:
Q  42 ttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||| ||||||||||||||| |||| |||||||||||||| | ||||| ||||    
T  40998946 ttgttttggttgcttgattattacttgtttcacacatcaaatattttatttgtgt 40998892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26085933 - 26085840
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| ||| |||   || ||||||||||| ||| |||||||||| |||  |||||| |||||||| || |||||||||||||    
T  26085933 ttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgactatcccttgctccacacatc-aagttgttattggtgt 26085840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22782693 - 22782593
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| |||   || ||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  22782693 ttttctacttttggcttgtatttataa--ctttcatacgctttgtttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 22782597  T
Q  100 tttt 103  Q
    ||||    
T  22782596 tttt 22782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 1e-64; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 436 - 605
Target Start/End: Original strand, 20599803 - 20599972
Alignment:
Q  436 ctcttaccttcatgaactgatcatcatattagaatggaatcaacacctgattttgtgaaaagggtgcttagagaagcgcttggtgatgacgttagcgatt 535  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  20599803 ctcttaccatcatcaaccgatcattatattagaatggaatcaacacctaattttgtgaaaagggtgcttagagaagcacttggcgacgacgttagcgatt 20599902  T
Q  536 tcaaactactggtatttgcagttcatgcttttattcttgaatcagggtttattcgtgtggatcgcgtttc 605  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20599903 tcaaactactggtatttgctgttcatgcttttattcttgaatcagggtttgttcgtgtggatcacgtttc 20599972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11355585 - 11355705
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||| |||||| |||||||||||||| |||||||||| ||    
T  11355585 ttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgat 11355684  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||| |||||||||| |||||    
T  11355685 ttttt-catcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21678388 - 21678506
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||| |||| ||||| |||||||| ||||| |||    
T  21678388 ttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgatt 21678487  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  21678488 ttt--catcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 443924 - 444044
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||| |||| |||||| |||||||||| |||||||||||||| | |    
T  443924 ttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtgagt 444023  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  444024 tttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21680354 - 21680473
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||  |||||||||||||   |    
T  21680354 ttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgattattccttgcttcacacatcaagcttgttattggtgtgggt 21680453  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  21680454 ttt--catcgaattcacaacag 21680473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13099435 - 13099317
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||  ||  |||||| |||||||||| |||||||||||||| |||    
T  13099435 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgatt 13099336  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  13099335 ttt--catcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31435011 - 31434892
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||| | ||||||||||||| |||||| |||||||||| |||||||||||||| |||    
T  31435011 ttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattccttgctccacacatcaagtttgttattggtgtgatt 31434912  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | |||||||||| |||||    
T  31434911 ttct-catcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37412085 - 37411965
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| | |    
T  37412085 ttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagt 37411986  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||| |||||||||||    
T  37411985 tttctcatcaaattcacaaca 37411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4295899 - 4295797
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||||||||||| |||    
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgatt 4295800  T
Q  101 ttt 103  Q
    |||    
T  4295799 ttt 4295797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20297695 - 20297810
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  20297695 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 20297791  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  20297792 ttt--catcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26804837 - 26804937
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||   ||||| ||||||||||||||||||||||||| |||    
T  26804837 ttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaaatttgttattggtgtgatt 26804936  T
Q  101 t 101  Q
    |    
T  26804937 t 26804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11759460 - 11759575
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  11759460 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 11759556  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  11759557 ttt--catcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20299793 - 20299908
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  20299793 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 20299889  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||| |||||||||||    
T  20299890 ttt--catcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38394319 - 38394434
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  38394319 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 38394415  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  38394416 ttt--catcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42330964 - 42330845
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||   ||||| |||||||||| ||| ||||||| || |||    
T  42330964 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttattattggcgtgatt 42330865  T
Q  101 ttttccatcgaattcacaacag 122  Q
    | |  |||||||||| ||||||    
T  42330864 tct--catcgaattcgcaacag 42330845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44724903 - 44725022
Alignment:
Q  1 ttttctacttttggcttgtgtttctaat-tgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||||||||       
T  44724903 ttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt--g 44725000  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||| ||||||||||| |||||    
T  44725001 ttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3036057 - 3036170
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| || |||||||| ||||||||||||| |||    
T  3036057 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccaaacatcaaa-ttgttattggtgtgatt 3036153  T
Q  101 ttttccatcgaattcacaa 119  Q
    | |  ||||||||||||||    
T  3036154 tct--catcgaattcacaa 3036170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 43253472 - 43253357
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| |||    
T  43253472 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaaa-ttgttattggtgtgatt 43253376  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  43253375 tt---catcgaattcgcaacag 43253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22251548 - 22251453
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||  ||||||  ||||||||| ||||||||||||||    
T  22251548 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatcccttgctcaacacatcaagtttgttattggtgt 22251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9679385 - 9679481
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||||||||||    
T  9679385 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgt 9679481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7471936 - 7471837
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  7471936 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 7471840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27306194 - 27306099
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||| |||  |||| | |||||||||| ||||||||||||||    
T  27306194 ttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaagtttgttattggtgt 27306099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48457986 - 48458100
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  48457986 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 48458082  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  48458083 tt---catcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25542861 - 25542976
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  25542861 ttttctacttttggcttgtattt--aattgttccatacattttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 25542957  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  25542958 ttt--catcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28485898 - 28486013
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||| ||||||||||||||  |||||| |||| ||| || ||||||||||||| |||    
T  28485898 ttttctacttttggcttgtattt--aattgttccatacattttgttttggttgcttgattatcccttgctccacatatc-aagttgttattggtgtgatt 28485994  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  28485995 ttt--catcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28487886 - 28488000
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  28487886 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 28487982  T
Q  101 ttttccatcgaattcacaac 120  Q
    |||  |||||||||| ||||    
T  28487983 ttt--catcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40836699 - 40836583
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||  |||||| |||||||| || ||||||||||||| | |    
T  40836699 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgtttgattatcccttgctccacacatc-aagttgttattggtgtga-t 40836604  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| ||||||||| |||||    
T  40836603 ttttcgatcgaattcgcaaca 40836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 42223482 - 42223600
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||  ||||||||| ||| ||||||||||||||  ||| || |||||||||| ||||||||||||||  ||    
T  42223482 ttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgttt 42223581  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||  ||||||||| |||||    
T  42223582 tttt--atcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1606712 - 1606827
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| |||    
T  1606712 ttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgatt 1606808  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  1606809 ttt--catcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7469978 - 7469864
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||  |||||||||||| | | |||| ||||||||||| ||||||||||||| |||    
T  7469978 ttttctacttttggcttgtattt--aattgttccatacactttgttttagttgcttgatta-tccctgctccacacatcaaa-ttgttattggtgtgatt 7469883  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  7469882 ttt--catcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 21990480 - 21990570
Alignment:
Q  5 ctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 94  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||| ||||||||    
T  21990480 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24465859 - 24465975
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| |  |||||||||||||||| |||||||||| |||  |||| | |||||||||||||| |||||||||| |||    
T  24465859 ttttctacttttggtttgtgattataact--tccatacactttgttttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgatt 24465956  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  24465957 ttt--catcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27832604 - 27832488
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| |  |||||||||||||||| |||| |||||||||||| |||| ||||||| || |||||||||||| | |||    
T  27832604 ttttctacttttggtttgtgattataact--tccatacactttgttttggttacttgattatttcctgctccacacattaagtttgttattggtatgatt 27832507  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  27832506 ttt--catcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35962 - 36059
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  35962 ttttctacttttggtttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 36058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1850314 - 1850411
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  1850314 ttttctacttttggcttgtattt--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 1850410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2935601 - 2935717
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  ||||||||||||| |||||||| |||||||| |||||  ||||||||||||||| || ||||||||||||| ||    
T  2935601 ttttctactttttggcttgtattt--aattgttccatacgctttgttttggttgcttaattatcccttgcttcacacatc-aagttgttattggtgtgat 2935697  T
Q  100 tttttccatcgaattcacaacag 122  Q
    |||   |||||||||||||||||    
T  2935698 ttt---catcgaattcacaacag 2935717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7188863 - 7188979
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||| |  |||||||||||||||| ||||||||||||||| |||||| |||||||||| | | |||||| ||| |||    
T  7188863 ttttctacttttg-cttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgatt 7188959  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||  |||||||||||||||    
T  7188960 tttt-gatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21592106 - 21592018
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 90  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||  |||||||  |||||| |||||||||| ||||||||    
T  21592106 ttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcacttgctccacacatcaagtttgttat 21592018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39145949 - 39145856
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 94  Q
    |||||||||||||| |||||||| ||||||||  ||||| ||||||| ||||||||||||||  ||| || |||||||||| ||||||||||||    
T  39145949 ttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9681146 - 9681242
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||  | |||||  |||| | |||||||||| ||||||||||||||    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgt 9681242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 44897 - 45013
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || ||||||||||||| |||    
T  44897 ttttctactttttgcttgtattt--aattgttccatacactttgttttggttgcttgattatccattgctccacacatc-aagttgttattggtgtgatt 44993  T
Q  101 ttttccatcgaattcacaacag 122  Q
    | |  |||||||||| ||||||    
T  44994 tct--catcgaattcgcaacag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7094416 - 7094301
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||| ||||||| ||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  7094416 ttttctacttttgacttgtattt--aattgttccacacactttattttggttgcttgactatgccttgctccacacatcaagtttgttattggtgtgatt 7094319  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  7094318 tt---catcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9027149 - 9027034
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  9027149 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 9027053  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  9027052 ttt--catcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 24748946 - 24749035
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||| ||||||||  |||||| |||||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  24748946 ttccatacactttgttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttttct-catcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38396972 - 38397070
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| |||    
T  38396972 ttttctacttttggcttgtattt--aattgttctatacactttgttttggttgctttattatcccttgctccacacatc-aagttgttattggtgtgatt 38397068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 7351607 - 7351491
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| |||||||| |||||  ||| || |||||||| || ||||||||||||| |||    
T  7351607 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttaattatcccttactccacacatc-aagttgttattggtgtgatt 7351511  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  7351510 tttt-catcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18345874 - 18345952
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||| |||  |||||| ||||||||||    
T  18345874 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaa 18345952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 40946663 - 40946777
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||| ||| |||    
T  40946663 ttttctatttttggcttgtattt--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattgatgtgatt 40946759  T
Q  101 ttttccatcgaattcacaaca 121  Q
     |   ||||||||||||||||    
T  40946760 ct---catcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7092169 - 7092070
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||| | |||  |||||||||| ||||||| ||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  7092169 ttttctacttttgacttatattt--aattgttccacacactttattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 7092072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20626366 - 20626481
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| | ||| ||| |  |||||||||||| ||| |||||||||||||| ||||||| |||||||| |  ||||||||||||| |||    
T  20626366 ttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatt 20626462  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  20626463 ttt--catcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20630257 - 20630372
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| | ||| ||| |  |||||||||||| ||| |||||||||||||| ||||||| |||||||| |  ||||||||||||| |||    
T  20630257 ttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatt 20630353  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  20630354 ttt--catcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20642676 - 20642791
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| | ||| ||| |  |||||||||||| ||| |||||||||||||| ||||||| |||||||| |  ||||||||||||| |||    
T  20642676 ttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattatctcttgctccacacatc-aggttgttattggtgtgatt 20642772  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  20642773 ttt--catcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3878911 - 3878990
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    |||||||||||||| |||| |||  |||||||||||||| ||| |||| |||||||||||||| ||||||| ||||||||||    
T  3878911 ttttctacttttggtttgtattt--aattgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaa 3878990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 20599735 - 20599799
Alignment:
Q  236 atcatagtaatatataattatatattgctaaccaacaatagcttctccccacaaaacgctagtctt 301  Q
    ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||| ||||||| ||||    
T  20599735 atcatagtactatatatttatatattgcta-ccaacaattgcttctccccacataacgctactctt 20599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 7349228 - 7349117
Alignment:
Q  6 tacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttc 105  Q
    |||||||||||||| ||| ||| | |  |||||||||| ||| |||||||| |||||  ||| || |||||||||| || ||||||||||| ||||||||    
T  7349228 tacttttggcttgtatttataacttt--catacactttattttggttgcttaattatcccttactccacacatcaagtt-gttattggtgtgattttttc 7349132  T
Q  106 catcgaattcacaaca 121  Q
     |||||||||||||||    
T  7349131 -atcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 22394047 - 22394161
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| |  |||||||||||||||| ||||| |||| |||  ||||||   |||||||| ||| ||||||||| ||||    
T  22394047 ttttctacttttggtttgtgattataact--tccatacactttgttttggttgtttgactatcacttgct--ccacatcaagtttattattggtggaatt 22394142  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  22394143 ttt--catcgaattcacaaca 22394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 26295770 - 26295869
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||  || |||||||||||||| | ||||||||||||  | |||| || ||||||| | | |||||||||| |||    
T  26295770 ttttctacttttggcttgtgtttataat--tttcatacactttgttttgattgcttgattatcacgtgctccatacatcaagtat-ttattggtgtgatt 26295866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 1046827 - 1046772
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttc 105  Q
    |||||||||||||| ||||||| |||||||| || ||||||||||||| ||||||||    
T  1046827 ggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgattttttc 1046772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 20137062 - 20136991
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||| |||  |||||| |||||||||||||| ||||| || | ||||||| ||||||||||||||||    
T  20137062 ggttgcttgactatcccttgctccacacatcaaatttattattcgtatgatttttt-catcgaattcacaaca 20136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 1049216 - 1049144
Alignment:
Q  34 catacactttgtttc--ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttc 105  Q
    ||||||||||||||   |||||||||||||| ||||||| |||||||| || ||||||||||||| | ||||||    
T  1049216 catacactttgttttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgaatttttc 1049144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6349122 - 6349188
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgct 70  Q
    ||||||||||||| ||||||||| ||| |  ||| |||||||||||| ||||||||||||||| ||||||    
T  6349122 ttttctacttttg-cttgtgtttataact--tccgtacactttgttttggttgcttgattattacttgct 6349188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  50 gttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||| ||||||| |||||||| || ||||||||||||| |||||   ||| ||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatttt---cattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 4e-43; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19007932 - 19008052
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||| |||    
T  19007932 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgatt 19008031  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||| |||||||||||||||||    
T  19008032 tttt-catcgaattcacaacag 19008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17849409 - 17849531
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  17849409 ttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 17849508  T
Q  101 ttttccatcgaattcacaacagga 124  Q
    |||| |||||||||||||||||||    
T  17849509 tttt-catcgaattcacaacagga 17849531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28196927 - 28197045
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || |||  |||||| ||||||||||||||||||||||||| |||    
T  28196927 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtgatt 28197026  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||| ||||||||    
T  28197027 ttt--catcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38020372 - 38020473
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||| |||    
T  38020372 ttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtgatt 38020471  T
Q  101 tt 102  Q
    ||    
T  38020472 tt 38020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28459155 - 28459036
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| | | |||||||||| |||    
T  28459155 ttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtgatt 28459056  T
Q  101 ttttccatcgaattcacaacagg 123  Q
    ||   ||||||||||||||||||    
T  28459055 tt---catcgaattcacaacagg 28459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22707714 - 22707595
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||| |||||||||||| || ||| || |||||||||||||||||||||||||  ||    
T  22707714 ttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttccttactccacacatcaaatttgttattggtgtggtt 22707615  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | |||||||||| |||||    
T  22707614 ttct-catcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3022464 - 3022559
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||| ||||    
T  3022464 ttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtgt 3022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22162987 - 22162892
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||||||||||| || ||| ||||||||||| ||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||    
T  22162987 ttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatcccttgcttcacacatcaaaattgttattggtgt 22162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27105096 - 27105206
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  27105096 ttttctacttttggcttgcattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 27105193  T
Q  101 ttttccatcgaattc 115  Q
    |||  ||||||||||    
T  27105194 ttt--catcgaattc 27105206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42923470 - 42923374
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||  |||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  42923470 ttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggtgt 42923374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14837560 - 14837680
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaat-ttgttattggtgtaat 99  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||  |||||| |||||||||| | ||||||||| ||| ||    
T  14837560 ttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgtgat 14837659  T
Q  100 tttttccatcgaattcacaacag 122  Q
    || |  |||||||||||||||||    
T  14837660 ttct--catcgaattcacaacag 14837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6258780 - 6258687
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 94  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||| |||||| |||||||  |||||| |||||||||| ||||||||||||    
T  6258780 ttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggt 6258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13910001 - 13909884
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  ||| || |||||||| || ||||||||||||| | |    
T  13910001 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattggtgtgact 13909905  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| |||||| ||||||||    
T  13909904 ttttcgatcgaagtcacaaca 13909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45279957 - 45279860
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  45279957 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 45279861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21520653 - 21520557
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||||||  |||||| |||||||||| ||||||||||||||    
T  21520653 ttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgt 21520557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34979552 - 34979457
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| ||| |||||||| |||||| ||| || |||||||||| ||||||||||||||    
T  34979552 ttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtttgttattggtgt 34979457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7462908 - 7462819
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 90  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||   ||||| |||||||||| ||||||||    
T  7462908 ttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttgctccacacatcaagtttgttat 7462819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22287299 - 22287181
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||| |||| ||||| ||| ||||||||||||||||| ||||| |||||||||| |||  |||||| |||||||||| ||||||||||||||   |    
T  22287299 ttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt--gt 22287202  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  22287201 tttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22407417 - 22407348
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgct 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||||    
T  22407417 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgct 22407348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 36561074 - 36560981
Alignment:
Q  25 taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  36561074 taattgttccatacgctttgttttggttgcttgattattccttgctccacacatc-aagttgttattggtgtgattttt--catcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15539492 - 15539398
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||| | |||||||| || | |||||| |||||||||| ||||||||||||||    
T  15539492 ttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttga-taatccttgctccacacatcaagtttgttattggtgt 15539398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24162179 - 24162062
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||| |||||||||| ||| |||||||||||||| |||| || |||||||| || ||||||||||||| ||     
T  24162179 ttttctacttttggcttgtattt--aattgtttcatacacttttttttggttgcttgattatctctttctccacacatc-aagttgttattggtgtgata 24162083  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||| ||||| |||||||||||    
T  24162082 tttt-catcgtattcacaacag 24162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43623542 - 43623423
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||| || || |||||||||||||||||||  ||| |||||| ||||||| | ||||| |||||||||| || ||||||||||| ||    
T  43623542 ttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagttattggtgtgat 43623443  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  43623442 tttt--catcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6264111 - 6263993
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||| |||||| ||||  |  |||||| |||||||||| ||||||||| ||||   |    
T  6264111 ttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcacttgctccacacatcaagtttgttattagtgt--gt 6264014  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  6264013 tttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23871108 - 23871211
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttc--catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    ||||||||||||| ||||||||| ||||||||   |||||||||||||| ||||  || ||| || |||||| ||||||||||||||||||||||||||     
T  23871108 ttttctacttttgccttgtgtttataattgtttttcatacactttgttttggttatttaattgttccttgctccacacatcaaatttgttattggtgtag 23871207  T
Q  99 tttt 102  Q
    ||||    
T  23871208 tttt 23871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 42453797 - 42453890
Alignment:
Q  24 ctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||||   ||||||||||||||||    
T  42453797 ctaattgttccatacattttattttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatttt---catcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5375308 - 5375218
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttatt 91  Q
    |||| |||||||| ||||| ||| ||||||||||||||||||||||| | ||||||||||||  ||| || |||||||||| |||||||||    
T  5375308 ttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgattatcccttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 20592395 - 20592484
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| ||||||  ||||||||  | | |||||||||| ||||||| ||||||||||||||||    
T  20592395 ttccatacactttgttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgatttttt-catcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 36558814 - 36558721
Alignment:
Q  25 taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||| |||||||| ||||||||||||||  |||||| |||||||| || || |||||||||| ||||||  ||||||||||||||||    
T  36558814 taattgttccatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttattattggtgtgattttt--catcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31732744 - 31732631
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| |  |||||||||| ||||| ||||||||||||||  ||||||||||||||||||    ||||| |||| |||    
T  31732744 ttttctacttttggtttgtgattataact--tccatacactctgttttggttgcttgattataacttgcttcacacatcaaa----ttattcgtgtgatt 31732651  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  31732650 tttt-catcgaattcacaaca 31732631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||||||  ||||||||| |||  |||||| |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  22874431 ttccatacactttgttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgattttt--catcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23452193 - 23452094
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| |||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  23452193 ttttctacttttagcttgtattt--aattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 23452097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  8 cttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttcca 107  Q
    |||||| ||||| ||| |||||||| ||||||||||||||   || ||||| |||  ||||||  ||||||||| |||||||||||||| ||||||  ||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttatttcttgactatcccttgctctacacatcaagtttgttattggtgtgattttt--ca 11739435  T
Q  108 tcgaattcacaaca 121  Q
    ||||||||||||||    
T  11739434 tcgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  3 ttctacttttggcttgtgtttctaattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    ||||||||||||||||| ||| ||| |  ||||||||||||||||  ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||    
T  19504291 ttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattt 19504195  T
Q  102 tttccatcgaattcacaaca 121  Q
    |   ||||||||||||||||    
T  19504194 t---catcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||| |  ||||||||||||||||  ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  19501958 ttttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 19501862  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  19501861 ttt---catcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11578072 - 11577957
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||||||  | ||   ||||| ||||| ||| ||||||||||||||| |||| | |||||||||| ||| |||||  ||| |||    
T  11578072 ttttctacttttggcttgtgtttaaactt---ccatatactttattttggttgcttgattattacttgttccacacatcaagttt-ttattaatgtgatt 11577977  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  11577976 tttt-catcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38414145 - 38414028
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||  ||||||||| ||||| |||||||||||||||||  ||||| | |||||  | |||| |||||| ||| |||||| ||||||| |||    
T  38414145 ttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcacgtgctccacacaccaattttgtt-ttggtgtgatt 38414047  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||| ||||||||||||    
T  38414046 ttt--catggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42064797 - 42064875
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    |||||||||||| |||||| |||  ||||||||||||||||||||||  |||||||||| ||  |||||| ||||||||||    
T  42064797 ttttctactttttgcttgtattt--aattgttccatacactttgttttagttgcttgatcatcccttgctccacacatcaa 42064875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 45332136 - 45332020
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  ||||||| || || |||||||| |||||||| |||||  |||| | |||||||||| || ||||||||||| ||    
T  45332136 ttttctactttttggcttgtattt--aattgttacaaacgctttgttttggttgcttaattatcccttgttccacacatcaagtt-gttattggtgtgat 45332040  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  45332039 tttt--catcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44289030 - 44288984
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgttt 47  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  44289030 ttttctactgttggcttgtgtttataattgtttcatacactttgttt 44288984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17848730 - 17848811
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    |||||||||||| | ||| |||| |||||||| ||||||||  | ||| ||||||||||||||  |||||| ||||||||||    
T  17848730 ttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgctccacacatcaa 17848811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17897211 - 17897114
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||| |||  |||  ||||||||| |||||||||||||||  ||||| |||||||||| | | |||||| |||| ||    
T  17897211 ttttctacttttg-cttgtgtttataactgt--catcaactttgttttggttgcttgattatt--ttgctccacacatcaagtattttattgatgtattt 17897117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12267937 - 12267818
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| | |||| |||||||||||||||||||||||||||||    
T  12267937 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactattccctgctccacacatcaaatttgttattggtgtaatt 12267838  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||| ||||||||||    
T  12267837 ttt--catcgagttcacaacag 12267818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27635616 - 27635515
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||| |||    
T  27635616 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgatt 27635517  T
Q  101 tt 102  Q
    ||    
T  27635516 tt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43423426 - 43423308
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||||||||||||    
T  43423426 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaatt 43423327  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  43423326 ttt--catcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32219383 - 32219503
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||| ||||||||| |||| ||    
T  32219383 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgat 32219482  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||| ||||||||||||||||    
T  32219483 ttttt-catcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43421378 - 43421260
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||| |||||||||||||| |||    
T  43421378 ttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtgatt 43421279  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  43421278 ttt--catcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18096859 - 18096740
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||||||||||    
T  18096859 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaat 18096760  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  18096759 tttt--catcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32263999 - 32263880
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||  |||||| |||||||||||||||||||| |||| |||    
T  32263999 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcacttgctccacacatcaaatttgttattagtgtgatt 32263900  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  | |||||||||||||||    
T  32263899 ttt--cttcgaattcacaacag 32263880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1313703 - 1313822
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||| | |    
T  1313703 ttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgagt 1313802  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||||||||| |||||    
T  1313803 tttt-catcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6484654 - 6484773
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||| |||||| |||||| |||||||||||||||||||| |||| ||    
T  6484654 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtgat 6484753  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||||  || ||||||||||||    
T  6484754 ttttt--attgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 48361629 - 48361511
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||||||||  ||| | || |||| || |||||||||| ||||| |    
T  48361629 ttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattcattgttccatacattaagtttgttattgatgtaagt 48361530  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||||||||||||||||||    
T  48361529 ttttccatcgaattcacaa 48361511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36012125 - 36012243
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||  |||||| || ||||||| |||||||||||||| |||    
T  36012125 ttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgatt 36012224  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  36012225 ttt--catcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24980007 - 24980127
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||||||||||       
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgt--g 24980104  T
Q  100 tttttccatcgaattcacaacag 122  Q
    ||||  |||||||||||||||||    
T  24980105 ttttctcatcgaattcacaacag 24980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18099129 - 18099010
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||  |||||||||||||  |||||| |||||||||| |||||||||||||| ||    
T  18099129 ttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 18099030  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  18099029 tttt--catcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18162961 - 18163080
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  ||| || |||||||||||||| |||||||||| ||    
T  18162961 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtgat 18163060  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||| ||||    
T  18163061 tttt--catcgaattcataaca 18163080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28181300 - 28181401
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||  | |||||| |||||||||| |||||||||||||| |||    
T  28181300 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgatt-gtccttgctccacacatcaagtttgttattggtgtgatt 28181398  T
Q  101 ttt 103  Q
    |||    
T  28181399 ttt 28181401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 53915456 - 53915337
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||| |||  |||||| || ||||||| |||||||||||||| |||    
T  53915456 ttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 53915357  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||| ||||||    
T  53915356 ttt--catcgaattcgcaacag 53915337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 53917624 - 53917522
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||| |||| |||    
T  53917624 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgatt 53917525  T
Q  101 ttt 103  Q
    |||    
T  53917524 ttt 53917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 880414 - 880302
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| ||||||||||||||||||| ||||||||||||| | |||||| |||||||||| |||||||| ||||| |||    
T  880414 ttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgatt 880315  T
Q  101 ttttccatcgaatt 114  Q
    |||| |||||||||    
T  880314 tttt-catcgaatt 880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 1626638 - 1626549
Alignment:
Q  7 acttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||| |||||| |||||||||| ||||||||||||||    
T  1626638 acttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattccttgctccacacatcaagtttgttattggtgt 1626549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4308240 - 4308122
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||| |||||| |||||||| || ||||||||||||| ||     
T  4308240 ttttctacttttggcttgtgattataattgttccatacactttgttttggttgttggattattccttgctccacacatc-aagttgttattggtgtgata 4308142  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||||||||| |||||    
T  4308141 tttt-catcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1321782 - 1321897
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  1321782 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatt 1321879  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  1321880 tt---catcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5926726 - 5926611
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||| |||| |||||||||| ||| |||||||||| || |||||||||||||| | |    
T  5926726 ttttctacttttg-cttgtgtttataattgttccttacactttgttttggttacttgattattccttacttcacacatgaagtttgttattggtgtgagt 5926628  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||  ||||||||||||||    
T  5926627 ttt--catcgaattcacaa 5926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10955981 - 10955867
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  10955981 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 10955885  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  10955884 tt---catcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10958277 - 10958163
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  10958277 ttttctacttttggcttgtattt--aattgttctatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 10958181  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  10958180 tt---catcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15781175 - 15781294
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||| ||| |  |||||||||||  ||| || |||||||||| ||||||||||||||   |    
T  15781175 ttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatcccttactccacacatcaagtttgttattggtgt--gt 15781272  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||||||||||||||||||||||    
T  15781273 ttttccatcgaattcacaacag 15781294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45883239 - 45883341
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||| |||||||| | |||  |||||| |||||||||| |||||||||||||| |||    
T  45883239 ttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgatt 45883338  T
Q  101 ttt 103  Q
    |||    
T  45883339 ttt 45883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 47701635 - 47701526
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||| |||| |   |||||||| |||||||||||||| |||    
T  47701635 ttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgattattacttgat---cacatcaagtttgttattggtgtgatt 47701539  T
Q  101 ttttccatcgaattc 115  Q
    |||  ||||||||||    
T  47701538 ttt--catcgaattc 47701526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 51674727 - 51674608
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacact-ttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| || ||||||||||| |  |||||| ||||||||||||||| |||||| || ||||||| |||||||||||||| ||    
T  51674727 ttttctacttttggcttgtgtttatatttgttccatacccacttgttt-ggttgcttgattattccttgctccatacatcaagtttgttattggtgtgat 51674629  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||| | ||||||||||||||||    
T  51674628 tttct-catcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 51943669 - 51943758
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 90  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||    
T  51943669 ttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3314981 - 3315077
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||| ||| ||||||||||    
T  3314981 ttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgt 3315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27101140 - 27101026
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||| |||||| ||||||||  ||||| |||||||| || ||||||||||||| ||     
T  27101140 ttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgattattcattgctccacacatc-aagttgttattggtgtgata 27101042  T
Q  101 ttttccatcgaattcac 117  Q
    |||| ||||||||||||    
T  27101041 tttt-catcgaattcac 27101026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43228589 - 43228687
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  43228589 ttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 43228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 53468414 - 53468319
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||  ||||||  ||||| |||||||||| ||||||||||||||    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttgttttggctgctccattattcattgctccacacatcaagtttgttattggtgt 53468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5191954 - 5192052
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  5191954 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 5192050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25533728 - 25533842
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||| ||| ||||||| |||||||| || ||||||||||||| |||    
T  25533728 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttga-tatctcttgctccacacatc-aagttgttattggtgtgatt 25533823  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  25533824 ttt--catcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50494302 - 50494417
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||||| |||||||| ||||| ||||||| |||||||| || ||||||||||||| |||    
T  50494302 ttttctacttttggcttgtatt--taattattccatacgctttgttttggttgcttaattatctcttgctccacacatc-aagttgttattggtgtgatt 50494398  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  50494399 ttt--catcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 54691534 - 54691417
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||| |||||| |||||||  |||||| ||||||| ||||||||||||| |||   |    
T  54691534 ttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatcacttgctccacacat-aaatttgttattgatgt--gt 54691438  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  54691437 tttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5886500 - 5886618
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||| ||||  |||||| |||||||| || ||||||||||||| |||    
T  5886500 ttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatc-aagttgttattggtgtgatt 5886597  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  | |||||||| |||||    
T  5886598 tttctcgtcgaattcgcaaca 5886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5899973 - 5900091
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||| ||||  |||||| |||||||| || ||||||||||||| |||    
T  5899973 ttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatc-aagttgttattggtgtgatt 5900070  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  | |||||||| |||||    
T  5900071 tttctcgtcgaattcgcaaca 5900091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 43226381 - 43226495
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| ||||||| |||||||| || ||||||||||||| ||||    
T  43226381 tttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgattt 43226477  T
Q  102 tttccatcgaattcacaaca 121  Q
     |  |||||||||| |||||    
T  43226478 ct--catcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 53591479 - 53591570
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattg 92  Q
    |||||| |||||| ||| ||||| ||||||||||||||| ||||||| ||||||||||||||  |||| | |||||||||||||||||||||    
T  53591479 ttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgattatcccttgttccacacatcaaatttgttattg 53591570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9604564 - 9604446
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||| |||| || |||||||| ||||||||||| || |||| |||||||||| |||||| |||||||| || ||||||||||||| |||    
T  9604564 ttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgattattccttgctccacacatc-aagttgttattggtgtgatt 9604466  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||| ||||||    
T  9604465 ttt--catcgaattcgcaacag 9604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10084343 - 10084245
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  10084343 ttttctacttttggcttgtattt--aattgtcccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 10084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10191266 - 10191168
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  10191266 ttttctacttttggcttgtattt--aattgtcccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 10191170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25389209 - 25389326
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  |||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||| | ||    
T  25389209 ttttctactttttggcttgtattt--aattattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtatgat 25389305  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||| ||||||||||||||||    
T  25389306 ttttt-catcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25688119 - 25688005
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| |||||  |||||||  |||||| ||||||| || |||||||||||||| |     
T  25688119 ttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtgag 25688020  T
Q  100 tttttccatcgaatt 114  Q
    ||||  |||||||||    
T  25688019 ttttctcatcgaatt 25688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 53894009 - 53893910
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  53894009 ttttctacttttggctt-tgtatttaattattccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 53893912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3307056 - 3307177
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaa-atttgttattggtgtaa 98  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||| | ||| ||||||||  ||||||||| |||||||  ||||||||||||||      
T  3307056 ttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgt-- 3307153  T
Q  99 ttttttccatcgaattcacaacag 122  Q
     ||||  |||||||||||||||||    
T  3307154 gttttctcatcgaattcacaacag 3307177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 11168404 - 11168519
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  11168404 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 11168500  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  11168501 ttt---catcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 31151667 - 31151754
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||| | | |||||||||| ||||||  ||||||||||||||||    
T  31151667 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgattttt--catcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 42990602 - 42990717
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  | |||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  42990602 ttttctacttttggcttgtatttataact--tacatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatt 42990699  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  42990700 tt---catcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 880203 - 880090
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| ||||| || ||| |||| ||||||||||||||   ||||||||||||| ||| || |||||||||| ||| |||||||||| | |    
T  880203 ttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattccttactccacacatcaagtttattattggtgtgact 880104  T
Q  101 ttttccatcgaattc 115  Q
    |||| ||||||||||    
T  880103 tttt-catcgaattc 880090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23633747 - 23633862
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||| |||||||||||| ||| |  |||||||||||||||| |||||||||||| |  ||||||||||||||| | | | |||||||||| |||    
T  23633747 ttttctacttgtggcttgtgtttataaat--tccatacactttgttttggttgcttgattttcacttgcttcacacatctagtat-ttattggtgtgatt 23633843  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  23633844 ttt--catcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 6232103 - 6232208
Alignment:
Q  9 ttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccat 108  Q
    ||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||     |||||||||||||||||||| |||| |||||   |||    
T  6232103 ttttgacttgtgtttataattgttccatacactttattttggttgcttgattattactc----cacacatcaaatttgttattagtgtgatttt---cat 6232195  T
Q  109 cgaattcacaaca 121  Q
    ||||||| |||||    
T  6232196 cgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47148856 - 47148795
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattat 62  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  47148856 ttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattat 47148795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28101963 - 28101848
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||| ||||||||  ||||| |  || ||||||| ||| ||||||||||||||  |||||| |||||||||| ||| |||||||||||||    
T  28101963 ttttctacttttgggttgtgttt--aattgct--atccactttgattttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaat 28101868  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  28101867 tttt--catcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 456211 - 456325
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  ||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  456211 ttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 456307  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  456308 tt---catcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 458588 - 458702
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  ||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  458588 ttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 458684  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  458685 tt---catcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 747061 - 747177
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||| | |  ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  747061 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 747157  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  747158 tttt--catcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 41849356 - 41849470
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  41849356 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 41849452  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  41849453 tt---catcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4666810 - 4666912
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||| ||||||||| |||| ||| |||||||| |||||||||| ||| |||||| |||| ||  ||| || |||||||||||||| |||||||||| |||    
T  4666810 ttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcacttactccacacatcaaatttattattggtgtgatt 4666909  T
Q  101 ttt 103  Q
    |||    
T  4666910 ttt 4666912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26720850 - 26720929
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaa 82  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||||    
T  26720850 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaaa 26720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28761402 - 28761287
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| |||||| || |||||  |||||||||||| ||| ||||| ||||||||  |||||| ||||||||||  || |||||||||| |||    
T  28761402 ttttctacttttg-cttgtgattataatt--tccatacactttattttggttgtttgattatcacttgctccacacatcaagattattattggtgtgatt 28761306  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  28761305 ttt--catcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38210674 - 38210789
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||||| | ||| ||||| ||  |||||| |||||||| || ||||||||||||| |||    
T  38210674 ttttctacttttggcttgtatt--taattattccatacgctttgttttgtttgtttgataatcccttgctccacacatc-aagttgttattggtgtgatt 38210770  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  38210771 ttt--catcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38890343 - 38890441
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  38890343 ttttctacttttggcttgtattt--aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 38890439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 3859813 - 3859930
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||| | |||  |||  | |||||||| || ||||||||||||| |      
T  3859813 ttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgcttaactatcccttattccacacatc-aagttgttattggtgtga-c 3859909  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||| |||||||||||||||    
T  3859910 ttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 17795581 - 17795670
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    ||||||||| ||| ||| |||||||||| |||   ||||| |||||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  17795581 ttccatacattttattttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgattttt--catcgaattcacaacag 17795670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 19104021 - 19104110
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    ||||||||| ||| ||| |||||||||| |||   ||||| |||||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  19104021 ttccatacattttattttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgattttt--catcgaattcacaacag 19104110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 51726961 - 51726847
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||| |||||| |||||||  |||||||| || ||||||||||||| ||    
T  51726961 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcctgatta-ttcttgccccacacatc-aagttgttattggtgtgat 51726866  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  51726865 ttt---catcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 561737 - 561640
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||| |  |||||||||||||||| ||||||||||||||| ||| || |||||||||| | | |||||||||| |||    
T  561737 ttttctacttttg-cttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttactccacacatcaagtattttattggtgtgatt 561642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 7606536 - 7606459
Alignment:
Q  25 taattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 102  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||||||| |||||||| || |||||||||||||| ||||    
T  7606536 taattgttccatacactttgattttggttgcttgactatctcttgctccacacatc-aagttgttattggtgtattttt 7606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39715762 - 39715804
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  39715762 ttttctacttttggcttgtgtttataattgttccatacacttt 39715804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8183097 - 8183040
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttga 58  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||| ||||||||||    
T  8183097 ttttctacttttgacttgtgtttataattgttccatacaccttattttggttgcttga 8183040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10621483 - 10621366
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    ||||||||||||||||||| ||| |||   || |||||||||||  ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| |    
T  10621483 ttttctacttttggcttgtatttataa--ctttcatacactttggtttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtga 10621387  T
Q  99 ttttttccatcgaattcacaaca 121  Q
    |||||  ||||||||||||||||    
T  10621386 ttttt--catcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 4103822 - 4103728
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacaggaatgtt 129  Q
    ||||||||||||| ||||||||| |||| |||  |||||| ||| |||||| |||||||||||||| |||||   |||||||||| ||||| |||||||    
T  4103822 ttccatacactttttttcggttgtttgactatc-cttgctccacgcatcaagtttgttattggtgtgatttt---catcgaattcgcaacatgaatgtt 4103728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 42992712 - 42992799
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| |||||  |||||||  ||||||  ||||||||| ||||||||| |||| |||||   ||||||||||||||||    
T  42992712 ttccatacactttgttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtgatttt---catcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6065749 - 6065633
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| |||   || ||||||||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  6065749 ttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 6065653  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  6065652 tttt--catcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11170673 - 11170752
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    ||||||||||||||||||| ||  ||||| |||||||||||||| ||| ||||||||||||||  ||| || ||||||||||    
T  11170673 ttttctacttttggcttgtatt--taattattccatacactttgattttggttgcttgattatcccttactccacacatcaa 11170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22114258 - 22114143
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||| | |  ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||| ||||||||| ||    
T  22114258 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatc-aagttgctattggtgtgat 22114162  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  22114161 ttt---catcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28412984 - 28412870
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||| ||| | |  ||||||||| |||| |||| |||||||||  |||||| |||||||||| || |||||||||||  ||    
T  28412984 ttttctacttttgacttgtatttataacttt--catacactt-gttttggttacttgattatcccttgctccacacatcaagtt-gttattggtgtgttt 28412889  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  28412888 ttt--catcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41585698 - 41585580
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||| |||||||||||||| |||    
T  41585698 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgccccacacatcaagtttgttattggtgtgatt 41585599  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  41585598 ttt--catcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17818453 - 17818338
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||  ||    
T  17818453 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggtt 17818354  T
Q  101 ttttccatcgaattcac 117  Q
    || | ||||||||||||    
T  17818353 ttct-catcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26098249 - 26098129
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||| ||||||||| | |    
T  26098249 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtgagt 26098150  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  26098149 tttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12555876 - 12555757
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || |||||||| |||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||| | |    
T  12555876 ttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattattccttgctccacacatcaaatttgttattggtgtgagt 12555777  T
Q  101 ttttccatcgaattcacaac 120  Q
    |||  |||||||||||||||    
T  12555776 tttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2724209 - 2724313
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||  ||||||||| |||||||||||||| |||    
T  2724209 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgatt 2724308  T
Q  101 ttttc 105  Q
    |||||    
T  2724309 ttttc 2724313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 10474285 - 10474168
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||| |||||| |||||||||| ||| |||||| ||||||||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattccttgctccacacatcaagtttattattgatgtaattt 10474186  T
Q  102 tttccatcgaattcacaaca 121  Q
    ||  |||||||| |||||||    
T  10474185 tt--catcgaatacacaaca 10474168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37705745 - 37705626
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||| ||||| |||||| |||||||||| ||||||||||||||  ||    
T  37705745 ttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttggttattccttgctccacacatcaagtttgttattggtgtggtt 37705646  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | ||||||||||||||||    
T  37705645 ttct-catcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 658321 - 658203
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| ||||| | |||||||| |||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||| |||    
T  658321 ttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtgatt 658222  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  658221 tt---catcgaattcgcaacag 658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31465952 - 31465849
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| |||||| |||| | ||||||||||||||||||||||||| ||    
T  31465952 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtgat 31465853  T
Q  100 tttt 103  Q
    ||||    
T  31465852 tttt 31465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 34530674 - 34530559
Alignment:
Q  4 tctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttt 103  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||  ||||||  ||||||||| |||||||||||||| ||||||    
T  34530674 tctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtgattttt 34530575  T
Q  104 tccatcgaattcacaaca 121  Q
      ||||||||||||||||    
T  34530574 --catcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40221845 - 40221947
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||   ||||| |||||||||| |||||||||||||| |||    
T  40221845 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgatt 40221944  T
Q  101 ttt 103  Q
    |||    
T  40221945 ttt 40221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20045302 - 20045395
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggt 94  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||   |||||||||||||||| ||||||||||||    
T  20045302 ttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1189570 - 1189475
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||| |||||| |||||||||| |||| |||||||||    
T  1189570 ttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattccttgctccacacatcaagtttgatattggtgt 1189475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4236951 - 4237065
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||| |||    
T  4236951 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgcttcacacatc-aagttgttattggtgtgatt 4237047  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   || |||||||||||||    
T  4237048 tt---caacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17073203 - 17073321
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||||| ||  |||||| |||||||||||||| |||||||||||  |    
T  17073203 ttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcatcacttgctccacacatcaaatttattattggtgta--t 17073300  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||   |||||||||||||||    
T  17073301 tttcggatcgaattcacaaca 17073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36208889 - 36209007
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||||||  ||||||  ||||||||| ||| |||||| ||| |||    
T  36208889 ttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcacttgctctacacatcaagtttattattgatgtgatt 36208988  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  36208989 ttt--catcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38882411 - 38882526
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  38882411 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 38882507  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  38882508 tt---catcgaattcgcaacag 38882526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21289075 - 21289187
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||| ||||||||| |||    
T  21289075 ttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgatt 21289174  T
Q  101 ttttccatcgaattc 115  Q
    |||  ||||||||||    
T  21289175 ttt--catcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18469332 - 18469448
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||| | |||    
T  18469332 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtatgatt 18469429  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  18469430 ttt--catcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21948348 - 21948445
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactt--tgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | ||| ||||||||||||||  |||||| |||||||||| ||||||||||||||    
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 21948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 36402289 - 36402170
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| |||||||||| ||||||||| |||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||||||| ||    
T  36402289 ttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgat 36402190  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  36402189 tttt--catcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2175224 - 2175341
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| | |    
T  2175224 ttttctacttttggcttgtattt--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgact 2175320  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||  |||||||||||||||    
T  2175321 tttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 25804347 - 25804448
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| ||     
T  25804347 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgata 25804443  T
Q  101 ttttc 105  Q
    |||||    
T  25804444 ttttc 25804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2954730 - 2954826
Alignment:
Q  1 ttttctacttttggcttgtgtttc-taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| |||||  |||||||  ||| || |||||||||||||||||||||||||    
T  2954730 ttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatcacttactccacacatcaaatttgttattggtgt 2954826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6747622 - 6747720
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg---tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||   ||| |||||||||||||| |||||||  ||||||||| ||||||||||||||    
T  6747622 ttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacatcaagtttgttattggtgt 6747720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20505808 - 20505710
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg---tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||   ||| |||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  20505808 ttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattggtgt 20505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10529054 - 10528937
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||| |||||||  ||||||||||||||| || ||||||||||||| ||    
T  10529054 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcctgattatcccttgcttcacacatc-aagttgttattggtgtgat 10528958  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||| | ||||||||||||||||    
T  10528957 tttct-catcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16776477 - 16776578
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||  |||||||| |||||||||||||| | |||| |||||||| |||||| |||||||||| |||||||||||||| |||    
T  16776477 ttttctacttttggcttgtatta-taattgtttcatacactttgttttgattgcctgattattccttgctccacacatcaagtttgttattggtgtgatt 16776575  T
Q  101 ttt 103  Q
    |||    
T  16776576 ttt 16776578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18467007 - 18467123
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||| | ||||||||||||  |||||| |||||||||| ||||||||| |||| |||    
T  18467007 ttttctacttttggcttgtatttataact--tccatacactttgttttgattgcttgattatcccttgctccacacatcaagtttgttattagtgtgatt 18467104  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  18467105 ttt--catcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18511174 - 18511056
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||  ||||||||| |||  |||||| |||||||||| |||||||||| ||| |||    
T  18511174 ttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcccttgctccacacatcaagtttgttattgatgtgatt 18511075  T
Q  101 ttttccatcgaattcacaaca 121  Q
    | |  |||||||||| |||||    
T  18511074 tat--catcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2818296 - 2818200
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| || ||| |||||||  |||||| || ||||||| ||||||||||||||    
T  2818296 ttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgttattggtgt 2818200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6745386 - 6745484
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg---tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  6745386 ttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttgttattggtgt 6745484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6756808 - 6756904
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa-atttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| | |||| |||||||  |||||| ||||||||||  ||||||||||||||    
T  6756808 ttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgt 6756904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20043305 - 20043397
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttga-ttatttcttgcttcacacatcaaatttgttattg 92  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||||  |||||| |||| ||||| ||||||||||    
T  20043305 ttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgatttatcacttgctccacaaatcaagtttgttattg 20043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26098047 - 26098127
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||  |||||| ||||||||||    
T  26098047 ttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 31179326 - 31179213
Alignment:
Q  3 ttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 102  Q
    |||||||||||||||||||||  |||| ||||||||||||||||| |||||||| |||||  |||||| || ||||| || ||||||||||||| |||||    
T  31179326 ttctacttttggcttgtgttt--aattattccatacactttgttttggttgcttaattatcccttgctccatacatc-aagttgttattggtgtgatttt 31179230  T
Q  103 ttccatcgaattcacaaca 121  Q
    |  ||||||||||||||||    
T  31179229 t--catcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10587138 - 10587252
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||| ||| |  |||||||||||||||| ||||||||||||| | |||||| |||||||||| |||||||||||||| |||    
T  10587138 ttttctacttttgacttgtatttataact--tccatacactttgttttggttgcttgatta-tccttgctccacacatcaagtttgttattggtgtgatt 10587234  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  10587235 tt---catcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 27910784 - 27910872
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||| ||| ||||| ||||||||  |||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  27910784 ttccatacactttattttggttgattgattatcccttgctccacacatcaaatttgttattggtgtgattttt--catcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18596961 - 18597063
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| || ||  |||||||  |||||| || ||||||| |||||||||||||| |||    
T  18596961 ttttctacttttgacttgtgtttataattgttccatacactttattttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtgatt 18597060  T
Q  101 ttt 103  Q
    |||    
T  18597061 ttt 18597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39798353 - 39798468
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| ||||||||||| ||||||||||||| |||    
T  39798353 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaaa-ttgttattggtgtgatt 39798449  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  39798450 ttt--catcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21684408 - 21684293
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| | |||  |||||||||||||||||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  21684408 ttttctacttttggcttttattt--aattgttccatacactttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 21684312  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  21684311 tt---catcgaattcgcaacag 21684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25921429 - 25921337
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| |||  |||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  25921429 ttttctacttttggcttgtattt--aattgttccatacactttattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 25921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27912859 - 27912973
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||| ||| ||| |  |||||||||||||||| ||||||||||||||  ||| || |||||||||| |||||||||||||  |||    
T  27912859 ttttctacttttagcttgtatttataact--tccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtgggatt 27912956  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||  ||||||||||||||    
T  27912957 ttt--catcgaattcacaa 27912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34477009 - 34476894
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  34477009 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 34476913  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  34476912 ttt---catcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3373093 - 3372977
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  3373093 ttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 3372997  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  3372996 tttt--catcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18509280 - 18509201
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatca 80  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||| |||  |||||| |||||||||    
T  18509280 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38960087 - 38959971
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  38960087 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 38959991  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||| ||||||    
T  38959990 ttt--catcgaattcgcaacag 38959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 39854802 - 39854922
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||| |||||||||||||||||| |||||||||||||||||||  ||| |||||||| | |||  |||||| |||| ||||| ||| |||||||||| ||    
T  39854802 ttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttattattggtgtgat 39854901  T
Q  100 tttttccatcgaattcacaacag 122  Q
    ||||  |||||||||| ||||||    
T  39854902 tttt--catcgaattcgcaacag 39854922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6661151 - 6661038
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||| |  |||||||||||| ||| ||||||||||||||| |||||| |||||||||||| | | |||||||| |||    
T  6661151 ttttctacttttg-cttgtgtttataact--tccatacactttattttggttgcttgattattacttgctccacacatcaaatatttaattggtgtgatt 6661055  T
Q  101 ttttccatcgaattcacaac 120  Q
    ||   |||||||||||||||    
T  6661054 tt---catcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 696191 - 696310
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcgg-ttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||  |||||||| ||| ||||||||||||||| ||| || || ||||||||| ||||||| |||||||||| | |||||||||| | ||    
T  696191 ttttctacttttgt-ttgtgtttataactgttccatacactttattttggttttcttgattatctcttgctccacacatcaagtctgttattggtatgat 696289  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||| | ||||||||||||||||    
T  696290 tttct-catcgaattcacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25904419 - 25904508
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttat 90  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||   |||||||| |||  |||||  |||||||||||||| ||||    
T  25904419 ttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttgactatcccttgcaccacacatcaaatttattat 25904508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34479374 - 34479275
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||  |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  34479374 ttttctacttttggcttgcattt--aattgttccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 34479278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16092162 - 16092069
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 95  Q
    |||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||| |||   ||||| |||| ||||| |||||||||||||    
T  16092162 ttttctacttttggcttgcgtttacaattgttccatatactttgttt-ggttgcttgactatccattgctccacatatcaagtttgttattggtg 16092069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24127172 - 24127291
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||| ||||| |||||||| ||||||||||| |||  ||||  |||||||  |||||| ||||||| || ||||||||| |||| ||    
T  24127172 ttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgtgtgat 24127271  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  24127272 tttt--catcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15552569 - 15552685
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||| ||| ||| | |  ||||||||||||||  |||||||||||||  ||| |||||| |||| || ||||||||||||| |||    
T  15552569 ttttctacttttagcttgtatttataacttt--catacactttgttttagttgcttgattatcccttacttcacgcatc-aagttgttattggtgtgatt 15552665  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  15552666 tttt-catcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10750022 - 10750137
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  10750022 ttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 10750118  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||    |||||||||||||||    
T  10750119 ttt---gatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10757498 - 10757613
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  10757498 ttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 10757594  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||    |||||||||||||||    
T  10757595 ttt---gatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 20054182 - 20054267
Alignment:
Q  34 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    |||||||||||||| ||||||||||||||| ||||||  ||||||||| | | ||||| |||| ||||||   ||||||||||||||||    
T  20054182 catacactttgttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattttt---atcgaattcacaacag 20054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39397968 - 39397916
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttg 53  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||| |||||    
T  39397968 ttttctacttttggcttgagtttataattgtttcatacactttgttttggttg 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4410345 - 4410442
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  ||||||||| || ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  4410345 ttttctacttttggcttgtatttataact--tccatacacctttttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 4410440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31543057 - 31543149
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| ||| ||| | |  ||||| |||||||| |||||||||||||   |||||| |||||||| || |||||||||||||    
T  31543057 ttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattaacccttgctccacacatc-aagttgttattggtgt 31543149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 31472529 - 31472458
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||| ||| |||| ||||||||||||| |||||||| |||||  | |||| |||||||||| |||||    
T  31472529 ggttgcttgagtatctcttacttcacacatcaagtttgttatcggtgt-gtatttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 9e-38; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 50078754 - 50078635
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||| |||    
T  50078754 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgatt 50078655  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | |||||||||| |||||    
T  50078654 ttct-catcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2949197 - 2949079
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  2949197 ttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 2949098  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  2949097 ttt--catcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18839904 - 18840027
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||||||| |||||| |||||||||| |||||||||||||| |||    
T  18839904 ttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattccttgctccacacatcaagtttgttattggtgtgatt 18840003  T
Q  101 ttttccatcgaattcacaacaggaat 126  Q
    |||  |||||||||| ||||| ||||    
T  18840004 ttt--catcgaattcgcaacaagaat 18840027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4131340 - 4131221
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| | |||||||| |||||||||||||| | |    
T  4131340 ttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgctccgcacatcaagtttgttattggtgtgagt 4131241  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| |||||||||| |||||    
T  4131240 tttt-catcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 50248535 - 50248415
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||  ||| || ||||||||||||||||||||||||| |||    
T  50248535 ttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatcccttactccacacatcaaatttgttattggtgtgatt 50248436  T
Q  101 ttttccatcgaattcacaacagg 123  Q
    | |  ||||||||||||||||||    
T  50248435 tat--catcgaattcacaacagg 50248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17319203 - 17319321
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||| ||||| ||||||||| ||| || ||||||||||||||||||||||||  |||    
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgatt 17319302  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  17319303 ttt--catcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14097934 - 14097838
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  14097934 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgt 14097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 47451948 - 47452065
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||  ||||||  |||||||||||||||||||| ||| ||||    
T  47451948 tttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgacacatcaaatttgttattgatgtgattt 47452047  T
Q  102 tttccatcgaattcacaaca 121  Q
    ||  ||| ||||||||||||    
T  47452048 tt--cattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11457440 - 11457328
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| |||||| |||||||  ||||||||||||||||| |||||||||||||| |||    
T  11457440 ttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgatt 11457341  T
Q  101 ttttccatcgaattc 115  Q
    |||  ||||||||||    
T  11457340 ttt--catcgaattc 11457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25251239 - 25251123
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  25251239 ttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 25251140  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||  ||||||||||||||    
T  25251139 ttt--catcgaattcacaa 25251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3579548 - 3579431
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||||||   |     
T  3579548 ttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacacatcaagtttgttattggtg---tg 3579452  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  3579451 tttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27336903 - 27336781
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| |||||||||| ||| ||    
T  27336903 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgat 27336804  T
Q  100 tttttccatcgaattcacaacag 122  Q
    ||||  || ||||||||||||||    
T  27336803 ttttctcaacgaattcacaacag 27336781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6995658 - 6995540
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| | |||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  6995658 ttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 6995559  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  6995558 ttt--catcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23816206 - 23816323
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||| |||    
T  23816206 ttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccacacatc-aagttgttattggtgtgatt 23816304  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  23816305 ttt--catcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47906587 - 47906704
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||| || |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  47906587 ttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 47906685  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  47906686 ttt--catcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 39932398 - 39932515
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 39932495  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  39932496 ttt--catcgaattcacaacag 39932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9241052 - 9240937
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||| ||||||||||||||  |||||| ||||| |||| |||||||||||||| |||    
T  9241052 ttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgatt 9240953  T
Q  101 ttttccatcgaattcaca 118  Q
    ||||  ||||||||||||    
T  9240952 tttt--atcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17324390 - 17324484
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtg 95  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||  ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  17324390 ttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28207031 - 28206912
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||||||||||       
T  28207031 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgt--g 28206934  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  28206933 ttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 25248516 - 25248398
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||| ||||| |||||||| |||||||||||||| |||||||||| |||| ||| || |||||||||| |||||||||| ||| |||    
T  25248516 ttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattccttactccacacatcaagtttgttattgttgtgatt 25248417  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  25248416 ttt--catcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27339094 - 27338973
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||| | |||||||||| |||||||||| ||| ||    
T  27339094 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgat 27338995  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  || |||||||||||||    
T  27338994 ttttctcaacgaattcacaaca 27338973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31490228 - 31490345
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||||| |||| ||||||||| |||    
T  31490228 ttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtgatt 31490326  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  31490327 ttt--catcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30780362 - 30780490
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgct--tcacacatcaaatttgttattggtgtaa 98  Q
    |||||||||||||  |||||||| |||||||| |||||||||||||| ||||||||||||||| ||| ||   |||||||||| |||||||||||||| |    
T  30780362 ttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtga 30780461  T
Q  99 ttttttccatcgaattcacaacaggaatgtt 129  Q
     ||||  ||||||||||||||||||| ||||    
T  30780462 gtttt--catcgaattcacaacaggattgtt 30780490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12302470 - 12302347
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| |||| | |||||||  |||||| |||||||||| ||||||||||||||  |    
T  12302470 ttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggtgtgtt 12302371  T
Q  100 tttttccatcgaattcacaacagg 123  Q
    |||||  ||||||||| |||||||    
T  12302370 tttttttatcgaattcgcaacagg 12302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13215400 - 13215495
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| |||  |||||| |||||||||| ||| ||||||||||    
T  13215400 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctccacacatcaagtttattattggtgt 13215495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13447231 - 13447117
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  13447231 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 13447135  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  13447134 tt---catcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15294792 - 15294694
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  15294792 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 15294696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31424980 - 31424878
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||| ||||||| ||||||  |||||||||| |||| |||||| |||||||||| |||||||||||||| |||    
T  31424980 ttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgatt 31424881  T
Q  101 ttt 103  Q
    |||    
T  31424880 ttt 31424878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39462837 - 39462956
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| ||| | |||| |||||||  |||||| |||||||||| |||||||||||||| ||    
T  39462837 ttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgat 39462936  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  39462937 tttt--catcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 50307508 - 50307389
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  |||||| || ||||||| ||| |||||||||| ||    
T  50307508 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttattattggtgtgat 50307409  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  50307408 tttt--catcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18307425 - 18307543
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||   ||||| |||||||||| |||||||||| ||||  |    
T  18307425 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcatttgctccacacatcaagtttgttattgatgta--t 18307522  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  18307523 tttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 51750362 - 51750461
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  51750362 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 51750458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10399786 - 10399669
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||| || ||||||||||||| ||    
T  10399786 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgat 10399690  T
Q  100 tttttccatcgaattcacaaca 121  Q
     |||| |||||||||| |||||    
T  10399689 atttt-catcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 31735472 - 31735365
Alignment:
Q  9 ttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccat 108  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || |||||||||||||||||| |  |||    
T  31735472 ttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtaatttct--cat 31735378  T
Q  109 cgaattcacaaca 121  Q
    ||||||| |||||    
T  31735377 cgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 46431663 - 46431548
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||| |||||||||||||| ||||||| || ||||| || ||||||||||||| |||    
T  46431663 ttttctacttttggcttgtattt--aattgttccatacgctttgttttggttgcttgattatctcttgctccaaacatc-aagttgttattggtgtgatt 46431567  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  46431566 ttt--catcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 51757862 - 51757973
Alignment:
Q  5 ctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttttt 104  Q
    ||||||||||||||| ||   |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||     
T  51757862 ctacttttggcttgtattc--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtcattttt- 51757957  T
Q  105 ccatcgaattcacaaca 121  Q
     ||||||||||||||||    
T  51757958 -catcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13762159 - 13762275
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  ||| || |||||||| || ||||||||||||| |||    
T  13762159 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatccctttctccacacatc-aagttgttattggtgtgatt 13762255  T
Q  101 ttttccatcgaattcacaaca 121  Q
    || | |||||||||| |||||    
T  13762256 ttct-catcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 14183542 - 14183455
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| | | |||||||||| ||||||   |||||||||||||||    
T  14183542 ttccatacactttgttttggttgcttgattattacttgcttcacacatcaagtattttattggtgtgattttt---atcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 16429277 - 16429387
Alignment:
Q  7 acttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttcc 106  Q
    |||||||| |||||||| ||| |  |||||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| ||||||  |    
T  16429277 acttttggtttgtgtttataact--tccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgattttt--c 16429372  T
Q  107 atcgaattcacaaca 121  Q
    |||||||||||||||    
T  16429373 atcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28998215 - 28998117
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc---ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||   |||||| |||||||  |||||| |||||||||| ||||| ||||||||    
T  28998215 ttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgt 28998117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29003931 - 29003833
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc---ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||   |||||| |||||||  |||||| |||||||||| ||||| ||||||||    
T  29003931 ttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgt 29003833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9459392 - 9459276
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  9459392 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 9459296  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  9459295 ttt--catcgaattcacaacag 9459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9463219 - 9463103
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  9463219 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 9463123  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  9463122 ttt--catcgaattcacaacag 9463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15916706 - 15916822
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||| |||||||||||| || |||||| |||||||||| | | |||||||||| | |    
T  15916706 ttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgact 15916802  T
Q  101 ttttccatcgaattcacaacag 122  Q
    |||  |||||||||||||||||    
T  15916803 ttt--catcgaattcacaacag 15916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40134260 - 40134387
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattattt--cttgcttcacacatcaaatttgttattggtgtaa 98  Q
    |||||||||||||||||| | || ||| |  |||||||||||||||| |||||| ||||||| |  |||||| |||||||||| |||||||||| ||| |    
T  40134260 ttttctacttttggcttgagattataact--tccatacactttgttttggttgcctgattatatcacttgctccacacatcaagtttgttattgatgtga 40134357  T
Q  99 ttttttccatcgaattcacaacaggaatgtta 130  Q
    |||||  ||||||||||||||||| |||||||    
T  40134358 ttttt--catcgaattcacaacagtaatgtta 40134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2617840 - 2617933
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||| || |||||||||||||    
T  2617840 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatcccttgcttcacacatc-aagttgttattggtgt 2617933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 480 - 633
Target Start/End: Complemental strand, 47945064 - 47944911
Alignment:
Q  480 acctgattttgtgaaaagggtgcttagagaagcgcttggtgatgacgttagcgatttcaaactactggtatttgcagttcatgcttttattcttgaatca 579  Q
    ||||||||| ||||| |||||  |||  ||||||||||||||||| ||||| ||||| || ||  |||| ||||| ||||||||| |||||||||||||     
T  47945064 acctgatttcgtgaagagggttattaaggaagcgcttggtgatgatgttagtgatttgaagctgttggtgtttgcggttcatgctgttattcttgaatct 47944965  T
Q  580 gggtttattcgtgtggatcgcgtttcgggtgtgaagattagttcctctcatctt 633  Q
    |||||| ||||||||||    ||||||||| ||  |||||||| |||| |||||    
T  47944964 gggtttgttcgtgtggacgaggtttcgggtatggcgattagttgctctaatctt 47944911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 30790337 - 30790250
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||  | | |||||||||| |||||   ||||||||||||||||    
T  30790337 ttccatacactttgttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtgatttt---catcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 2510284 - 2510202
Alignment:
Q  19 tgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 102  Q
    ||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||| ||| || ||||||||||||| |||||    
T  2510284 tgtttttaattgttccatacactttgttttcgttgcttgattatctcttgcttcacatatc-aagttgttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15823865 - 15823968
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| |||||| || |||||||||||||||||||| ||| |||||| ||||||   ||| || |||||||||| |||||||||||||| ||    
T  15823865 ttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtgtgat 15823964  T
Q  100 tttt 103  Q
    ||||    
T  15823965 tttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23786162 - 23786278
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  ||||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  23786162 ttttctactttttggcttgtattt--aattgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 23786258  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  23786259 tttt--catcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25860367 - 25860276
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    ||| |||| |||  |||||| |||||||||| |||| |||||||||    
T  25860367 ttttctacttttggcttgtgtttataattgttccatacactttgtt----ttggttgactatcccttgctccacacatcaagtttgatattggtgt 25860276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31422825 - 31422706
Alignment:
Q  1 ttttctacttttggcttgtg-tttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| |||||| ||| ||||| |||| |||||||| |||  |||| ||||||||| |||||| |||||||||| |||||||||| ||| ||    
T  31422825 ttttctacttttgacttgtgttttataattattccgtacactttattttagttgattgattattccttgctccacacatcaagtttgttattgatgtgat 31422726  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  31422725 tttt--catcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38925448 - 38925351
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||  ||| |||||| |||||||  ||| || |||||||||| ||| ||||||||||    
T  38925448 ttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtgt 38925351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20291779 - 20291894
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||| ||| |||| ||||||||| ||||||| |||||||| || ||||||||||||| ||    
T  20291779 ttttctacttttggcttgtatt--taattgttccatacaccttgattttggttacttgattatctcttgctccacacatc-aagttgttattggtgtgat 20291875  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  20291876 ttt---catcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16226491 - 16226607
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||| | |  ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  16226491 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 16226587  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  16226588 tttt--catcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16432705 - 16432805
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| || ||||| ||| | |  |||||||| ||||| | |||| |||||||| |||||| ||||||||||||||||||||||||| |||    
T  16432705 ttttctacttttggtttatgtttataacttt--catacactgtgttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgatt 16432802  T
Q  101 ttt 103  Q
    |||    
T  16432803 ttt 16432805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 41647236 - 41647355
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||| ||| |||||  |||||||  |||||| | |||||||| ||||||||||||||       
T  41647236 ttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgt--g 41647333  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  41647334 ttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 24326008 - 24326101
Alignment:
Q  25 taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||||||||  || ||||||||||||||  ||| || |||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  24326008 taattgttccatacactttactttggttgcttgattatcccttactccacacatc-aagttgttattggtgtgattttt--catcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16231886 - 16232003
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| |||   || ||||||||||| ||| ||||||||||||||   ||||| |||||||| || ||||||||||||| ||    
T  16231886 ttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgattatccgttgctccacacatc-aagttgttattggtgtgat 16231982  T
Q  100 tttttccatcgaattcacaacag 122  Q
    ||||  |||||||||||||||||    
T  16231983 tttt--catcgaattcacaacag 16232003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18800538 - 18800426
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||| | |||||||||||||  |||||  ||||||||| | | || ||||||| |||    
T  18800538 ttttctacttttggcttgtgtttataact--tccatacactttgttttgattgcttgattattatttgctctacacatcaagtattttgttggtgtgatt 18800441  T
Q  101 ttttccatcgaattcaca 118  Q
    ||   |||||||||||||    
T  18800440 tt---catcgaattcaca 18800426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20302764 - 20302879
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||| ||| |||| ||||||||| ||||||| || ||||| || ||||||||||||| ||    
T  20302764 ttttctacttttggcttgtatt--taattgttccatacaccttgattttggttacttgattatctcttgctccagacatc-aagttgttattggtgtgat 20302860  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  20302861 ttt---catcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 51752696 - 51752805
Alignment:
Q  5 ctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttttt 104  Q
    ||||||||||||||| ||   ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||  || || |||||||||| |||||      
T  51752696 ctacttttggcttgtattc--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacat--aagttattattggtgtgatttt-- 51752789  T
Q  105 ccatcgaattcacaaca 121  Q
     ||||||||||||||||    
T  51752790 -catcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 8348991 - 8348905
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||||||||||||| |||| | ||||| |||| ||| |||||||||| ||||||  ||||||||||||||||    
T  8348991 ttccatacactttgttt-ggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtgattttt--catcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 17186067 - 17185979
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| |||||||||| |||  |||||| |||| ||||| ||| |||||||||| ||||||  |||| |||||||||||    
T  17186067 ttccatacactttgttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgattttt--catcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47177685 - 47177801
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  ||||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  47177685 ttttctacttttggcttgtatt--taattattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 47177781  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||   |||||||||||||||    
T  47177782 tttt--gatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50076638 - 50076563
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacac 76  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||  ||||||| ||||||  ||||| |||||    
T  50076638 ttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 43104503 - 43104615
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtt-tcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||||||| ||||||||||   ||| ||| | ||||||||||||||||||  ||||||||| ||||||| | |||||||||||||    
T  43104503 ttttctacttttg-cttgtgtttgtaattgttcc---cacgttgatatcggttgcttgattattt--tgcttcacatatcaaatattttattggtgtaat 43104596  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||| |||||||||||    
T  43104597 ttt---catcaaattcacaaca 43104615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17324598 - 17324482
Alignment:
Q  1 ttttctacttt-tggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||| |||||| || || ||||||||| || |||||||||  || ||||||| |||  ||| || |||||||||| |||||||||||||| |     
T  17324598 ttttctactttctggcttatgattataattgttctattcactttgttatggctgcttgactatcccttactccacacatcaagtttgttattggtgtgag 17324499  T
Q  100 tttttccatcgaattcac 117  Q
    ||||| ||||||||||||    
T  17324498 ttttt-catcgaattcac 17324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28842817 - 28842931
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  ||| || |||||||| || |||||||| |||| |||    
T  28842817 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattagtgtgatt 28842913  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  28842914 tt---catcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47180036 - 47180152
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  ||||| |||||||| ||||| ||| | |||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  47180036 ttttctacttttggcttgtatt--taattattccatacgctttgattttgattgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 47180132  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||   |||||||||||||||    
T  47180133 tttt--gatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28841002 - 28841080
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaa 81  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| ||| ||||||    
T  28841002 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccactcatcaa 28841080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 15669327 - 15669279
Alignment:
Q  35 atacactttgtttcggttgcttgattatttcttgcttcacacatcaaat 83  Q
    ||||||||||||| | |||||||||||||  ||||||||||||||||||    
T  15669327 atacactttgttttgattgcttgattattatttgcttcacacatcaaat 15669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16428968 - 16429043
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacat 78  Q
    |||||||||||||| |||||||| ||| |  || ||||||||||||| |||||| |||||||  |||||| |||||||    
T  16428968 ttttctacttttggtttgtgtttataact--tctatacactttgttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 26519373 - 26519328
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacaca 77  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  26519373 ttccatacactttgttt-ggttgcttgattattacttgctccacaca 26519328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13358896 - 13359011
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| |||   || ||||||||||| ||| |||||||||| |||  ||| || |||||||| || ||||||||||||| ||    
T  13358896 ttttctacttttggcttgtatttataa--ctttcatacactttgattttggttgcttgactatcccttactccacacatc-aagttgttattggtgtgat 13358992  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  13358993 ttt---catcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 5e-36; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15367380 - 15367498
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  | |||| |||||||||| |||||||||||||| |||    
T  15367380 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgatt 15367479  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  15367480 ttt--catcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11982989 - 11982872
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| || ||||||||||||| |||    
T  11982989 ttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattattccttgctccacacatc-aagttgttattggtgtgatt 11982891  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  11982890 ttt--catcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24338413 - 24338295
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||| |||||||||| ||| |||    
T  24338413 ttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctccacacatcaagtttgttattgatgtgatt 24338314  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  24338313 ttt--catcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9020280 - 9020398
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||  ||||||| ||||||| |||||||||| |||||||||||||| |||    
T  9020280 ttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattatctcttgctccacacatcaagtttgttattggtgtgatt 9020379  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  9020380 ttt--catcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15346695 - 15346813
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  |||| | |||||||||| |||||||||||||| |||    
T  15346695 ttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgatt 15346794  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||| ||||||    
T  15346795 ttt--catcgaatttacaaca 15346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3631902 - 3631784
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||  |||||| ||||| |||| ||||||||||||||   |    
T  3631902 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgt--gt 3631805  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  3631804 tttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3629830 - 3629711
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||   ||||| |||||||||| ||||||||||||||       
T  3629830 ttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagtttgttattggtgt--g 3629733  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  3629732 ttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1069681 - 1069560
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| | |||||||| |||  |||||| || ||||| |||||||||||||| ||  |    
T  1069681 ttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccatacatcgaatttgttattggtata--t 1069584  T
Q  101 ttttccatcgaattcacaacagga 124  Q
    |||  |||||||||||||||||||    
T  1069583 tttctcatcgaattcacaacagga 1069560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28241277 - 28241163
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| | |||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  28241277 ttttctacttttggcttgtattt--aattgttccatacactttgttttgattgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 28241181  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  28241180 tt---catcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30728787 - 30728685
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||| |||| |||  |||||| |||||||||| |||||||||||||| |||    
T  30728787 ttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgatt 30728688  T
Q  101 ttt 103  Q
    |||    
T  30728687 ttt 30728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14507132 - 14507040
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || |||||||||||||    
T  14507132 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 14507040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4816186 - 4816087
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  4816186 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 4816090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19704521 - 19704400
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    ||||||||||||||||||| |||  |||||||||||||||||||  ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |    
T  19704521 ttttctacttttggcttgtattt--aattgttccatacactttgatttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 19704425  T
Q  99 ttttttccatcgaattcacaacagga 124  Q
     ||| || ||||||||||||||||||    
T  19704424 -tttctcgatcgaattcacaacagga 19704400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15530125 - 15530003
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||||   ||| | |||  |||||||| ||| || |||||||||| |||||||||||||| |     
T  15530125 ttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtgtgag 15530026  T
Q  100 tttttc-catcgaattcacaaca 121  Q
    |||||| ||||||||||||||||    
T  15530025 tttttctcatcgaattcacaaca 15530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 29754642 - 29754548
Alignment:
Q  25 taattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    |||||||||||||| |||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||  |||||||||||||||||    
T  29754642 taattgttccatacgctttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt--catcgaattcacaacag 29754548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26065337 - 26065457
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||| |||| || ||| |||||||||| ||||| ||| |||||||||| |||  |||||| |||||||||| || ||||||||||| ||    
T  26065337 ttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaagtt-gttattggtgtgat 26065435  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  26065436 ttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26085306 - 26085426
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||| |||| || ||| |||||||||| ||||| ||| |||||||||| |||  |||||| |||||||||| || ||||||||||| ||    
T  26085306 ttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaagtt-gttattggtgtgat 26085404  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  26085405 ttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3394718 - 3394814
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||   || || ||||||||||  || ||||||||||    
T  3394718 ttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgt 3394814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26066077 - 26065961
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  ||||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  26066077 ttttctactttttggcttgtattt--aattgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 26065981  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  26065980 tttt--catcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26068351 - 26068235
Alignment:
Q  1 ttttctactttt-ggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||| ||||||| |||  ||||||||||||| |||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  26068351 ttttctactttttggcttgtattt--aattgttccatacgctttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 26068255  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  26068254 tttt--catcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||| |||||||||||||||  ||||| |||||||||| | | |||||| ||| |||    
T  17012387 ttttctacttttggcttgtgttt-taac-gttc-atacactttgttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatt 17012483  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  17012484 ttt--catcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 33311483 - 33311599
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  33311483 ttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 33311579  T
Q  100 tttttccatcgaattcacaacag 122  Q
    |||   |||||||||||||||||    
T  33311580 ttt---catcgaattcacaacag 33311599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3233686 - 3233594
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattg 92  Q
    |||||||||||||| |||||||| |||||||| ||| ||||||| ||| |||||| |||||||  ||| || |||||||||||||||||||||    
T  3233686 ttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaaatttgttattg 3233594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33309214 - 33309329
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  33309214 ttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 33309310  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   ||||||||||||||||    
T  33309311 ttt---catcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1230205 - 1230105
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||| |||||||||||| ||| | |||||||| |||||||||| ||| |||||||||||||| ||||| | |||||||| || ||||||||||||| |||    
T  1230205 ttttatacttttggctt-tgtatttaattgtttcatacactttattttggttgcttgattatctcttgatccacacatc-aagttgttattggtgtgatt 1230108  T
Q  101 ttt 103  Q
    |||    
T  1230107 ttt 1230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5273172 - 5273055
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  || |  | ||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  5273172 ttttctacttttggcttgtatttaaaaat--tacatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 5273076  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||| ||||||||||||||||    
T  5273075 ttttt-catcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26932518 - 26932403
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||| |||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  26932518 ttttctacctttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 26932422  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||| |||||||||||    
T  26932421 ttt--catcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25480229 - 25480346
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| |||||| || |||||||| |||||||||| ||| ||||||| || |||  ||| ||  ||||||||||| | |||||||||| |||    
T  25480229 ttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaaatat-ttattggtgtgatt 25480327  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  25480328 ttt--catcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2628842 - 2628727
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| ||| |  ||||||||||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  2628842 ttttctacttttggcttgtatttataact--tccatacactttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 2628746  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  2628745 ttt---catcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 14466706 - 14466787
Alignment:
Q  34 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcac 117  Q
    |||||| ||||||| |||||||||| |||  |||||| |||||||||||||| |||||||||| ||||||  ||||||||||||    
T  14466706 catacattttgttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgattttt--catcgaattcac 14466787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 18322482 - 18322550
Alignment:
Q  34 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttt 103  Q
    |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||    
T  18322482 catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt 18322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 12195470 - 12195354
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| ||| |||   || ||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  12195470 ttttctacttttggcttgtatttataa--ctttcatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 12195374  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  12195373 tttt--catcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20915312 - 20915213
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||| || |||||||||||||| |||||||||||||   |||||  |||||||| || || |||||||||| |||    
T  20915312 ttttctacttttggcttgtattt--aattatttcatacactttgttttggttgcttgattaccccttgccccacacatc-aagttattattggtgtgatt 20915216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32280348 - 32280463
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| |||||||| |  ||   |||| | ||||||||||||||  ||| || || ||||||| ||||||||| |||| |||    
T  32280348 ttttctacttttggcttgtatttataattgttacccac---ttgtattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgatt 32280444  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||||  |||||||||||||||    
T  32280445 tttt--atcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3027817 - 3027703
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||| ||| |  |||||||||||| ||| ||||||| ||||||| |||||| |||||||||||| | |||| ||||| |||    
T  3027817 ttttctacttttgacttgtatttataact--tccatacactttattt-ggttgctcgattattacttgctccacacatcaaatat-ttatcggtgtgatt 3027722  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||| ||||||||||||    
T  3027721 ttt--cattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 8717264 - 8717195
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  8717264 ggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt--catcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 13057589 - 13057659
Alignment:
Q  49 ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||   ||||| |||||||||| |||||||||||||| ||||||  |||||||||| |||||    
T  13057589 ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgattttt--catcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22490964 - 22491077
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||| | ||||| |||||||| |  ||   |||||| ||||||||||||||   | ||| ||||||| || |||||||||||||| |||    
T  22490964 ttttctacttttggcctatgtttataattgttacccac---ttgttttggttgcttgattatccttagctccacacattaagtttgttattggtgtgatt 22491060  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||  ||||||||||||||    
T  22491061 ttt--catcgaattcacaa 22491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14458723 - 14458663
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattat 62  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||| |||||||    
T  14458723 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcctgattat 14458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 26945495 - 26945594
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||   |||| |||||||||||| | ||  ||||||||| |||| |||||| ||||| | | |||||||||| |||    
T  26945495 ttttctacttttggcttgtgtttataa--cttccttacactttgttt-gattctttgattattacttgtttcacatatcaagtgttttattggtgtgatt 26945591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 19696825 - 19696887
Alignment:
Q  38 cactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatttt 102  Q
    |||||||||||||||||||||||| |  ||||| |||||||||| | | |||||||||| |||||    
T  19696825 cactttgtttcggttgcttgattact--ttgctccacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 10584358 - 10584413
Alignment:
Q  65 cttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||| |||||||||| ||||||||||||||  |||| | ||||||||||||||||    
T  10584358 cttgctccacacatcaagtttgttattggtgtggttttct-catcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50339 - 50457
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  50339 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 50438  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  50439 ttt--catcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 52338 - 52456
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||||| |||    
T  52338 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 52437  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  52438 ttt--catcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 183597 - 183500
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  183597 ttttctacttttggcttgtattt--aattgttccatacattttgtttcggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 183501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30480466 - 30480365
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||| |||    
T  30480466 ttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattccttactccacacatcaaatttgttattggtgtcatt 30480367  T
Q  101 tt 102  Q
    ||    
T  30480366 tt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15073084 - 15073202
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  15073084 ttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 15073183  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  15073184 ttt--catcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14808133 - 14808237
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||   ||||| |||||||||| |||||||||||||| |||    
T  14808133 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgatt 14808232  T
Q  101 ttttc 105  Q
    |||||    
T  14808233 ttttc 14808237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28251528 - 28251410
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||| |||||| |||||||| |||||| |||||||| || ||||||||||||| |||    
T  28251528 ttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattattccttgctccacacatc-aagttgttattggtgtgatt 28251430  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||| ||||||||||||||||    
T  28251429 tttt-catcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15068354 - 15068472
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||  |||| | |||||||||| |||||| ||||||| |||    
T  15068354 ttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgatt 15068453  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  15068454 ttt--catcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 33541372 - 33541254
Alignment:
Q  2 tttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||  ||| || |||||||||| |||||||||||||| ||||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatcccttactccacacatcaagtttgttattggtgtgattt 33541273  T
Q  102 tttccatcgaattcacaacag 122  Q
    ||   ||||||||||||||||    
T  33541272 tt--gatcgaattcacaacag 33541254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35872419 - 35872301
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||  ||| ||||||||||||| ||||||||||||||   |    
T  35872419 ttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtttgttattggtgt--gt 35872322  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  35872321 tttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36865911 - 36866002
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattg 92  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||||| ||||||||||    
T  36865911 ttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgttattg 36866002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41383036 - 41383131
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||| | |||||||||||| ||||||| |||||||||| ||||||||||||||    
T  41383036 ttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattatctcttgctccacacatcaagtttgttattggtgt 41383131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13858450 - 13858331
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||| ||||||||||||||  |||||| |||||||||| ||| |||||||||| |||    
T  13858450 ttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgatt 13858353  T
Q  101 ttttccatcgaattcacaacagga 124  Q
    |||  ||||||||| |||||||||    
T  13858352 ttt--catcgaatttacaacagga 13858331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37214227 - 37214132
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||| |||| || || ||||||| ||||||||||||||    
T  37214227 ttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctcttactccatacatcaagtttgttattggtgt 37214132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43530494 - 43530593
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  43530494 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 43530590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 3874372 - 3874487
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||| |||| ||||||| |||||||| || ||||||||||||| |||    
T  3874372 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttggttatctcttgctccacacatc-aagttgttattggtgtgatt 3874468  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  || |||||||||||||    
T  3874469 ttt--caacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14419153 - 14419035
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||| | |||||||  |||||| || ||||||| ||||||||||||||   |    
T  14419153 ttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgt--gt 14419056  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  14419055 tttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 14477630 - 14477740
Alignment:
Q  9 ttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccat 108  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||  |||||||  |||||| |||||||||| |||||||||||||| ||||||  |||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttgttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgattttt--cat 14477727  T
Q  109 cgaattcacaaca 121  Q
    |||||||||||||    
T  14477728 cgaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18811086 - 18811202
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||| || ||||||||||||| ||    
T  18811086 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgat 18811182  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  |||||||||| |||||    
T  18811183 tttt--catcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27827364 - 27827479
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  27827364 ttttctacttttgacttgtattt--aattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 27827461  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   |||||||||| |||||    
T  27827462 tt---catcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22684609 - 22684491
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  |||||||||||| |||||| ||| |||||| |||||||  |||||| |||||||||| || ||||||||||| ||    
T  22684609 ttttctacttttggcttgtattt--aattgttccataaactttgattttggttgcctgattatcccttgctccacacatcaagtt-gttattggtgtgat 22684513  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||||||||||||||| |||||    
T  22684512 tttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25952892 - 25953010
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    |||||||||||||| |||||||| |||||| | |||||||||| ||| ||||||||||||||  ||| || |||||||||| ||||||||||||||   |    
T  25952892 ttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttctccacacatcaagtttgttattggtgt--gt 25952989  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  ||||||||||||||||    
T  25952990 tttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27829675 - 27829791
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||| | |||  |||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||||||||||||| |||    
T  27829675 ttttctacttttgacttatattt--aattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatt 27829772  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  27829773 tt---catcgaattcgcaacag 27829791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3883551 - 3883436
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||   ||||| |||||||| || ||||||||| ||| |||    
T  3883551 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatcctttgctccacacatc-aagttgttattgatgtgatt 3883455  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  3883454 ttt--catcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4424397 - 4424512
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||| |||||| | || ||||||||||||| ||    
T  4424397 ttttctacttttggcttgtattt--aattgttccatacactttgtttttggttgcttgattatcccttgctccacaca-ccaagttgttattggtgtgat 4424493  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   ||||||||||||||||    
T  4424494 ttt---catcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 18813260 - 18813377
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||||||| |||||||  ||| ||| || ||||||||||||| ||    
T  18813260 ttttctacttttggcttgtattt--aattgttccatacactttgattttggttgcttgattatctcttgctctacatatc-aagttgttattggtgtgat 18813356  T
Q  100 tttttccatcgaattcacaacag 122  Q
    ||||  |||||||||| ||||||    
T  18813357 tttt--catcgaattcgcaacag 18813377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28283177 - 28283062
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| |  || || |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  28283177 ttttctacttttggcttgtatttat--ttttttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 28283081  T
Q  101 ttttccatcgaattcacaaca 121  Q
    |||  |||||||||| |||||    
T  28283080 ttt--catcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15809597 - 15809712
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||| ||||| ||||| |||  ||||||| |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  15809597 ttttctatttttgccttgtattt--aattgtttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 15809693  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  15809694 tt---catcgaattcgcaacag 15809712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 609114 - 609230
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttc--ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    ||||||||||||||||||| |||  ||||||| ||||||||||||||   |||||||||||||| ||||||| ||| |||| || ||||||||||||  |    
T  609114 ttttctacttttggcttgtattt--aattgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatc-aagttgttattggtgcga 609210  T
Q  99 ttttttccatcgaattcacaaca 121  Q
    ||||   ||||||||||||||||    
T  609211 tttt---catcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27911451 - 27911551
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||  ||| | | |||||  |||||| |||||||||| ||| |||||||||| |||    
T  27911451 ttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagttttttattggtgtgatt 27911548  T
Q  101 ttt 103  Q
    |||    
T  27911549 ttt 27911551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27957870 - 27957970
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||  ||| | | |||||  |||||| |||||||||| ||| |||||||||| |||    
T  27957870 ttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagttttttattggtgtgatt 27957967  T
Q  101 ttt 103  Q
    |||    
T  27957968 ttt 27957970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31162584 - 31162683
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||| |||| ||| |||||| |||||| |||||||||| | | |||||||||| |||    
T  31162584 ttttctacttttggcttgtatttataact--tccatacactttgttttggttacttaattattacttgctccacacatcaagtattttattggtgtgatt 31162681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 27106835 - 27106770
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||| |||||||||| |||  |||||| |||||||||| ||||||||||||||    
T  27106835 ttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt 27106770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 181849 - 181901
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttg 53  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  181849 ttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 2468066 - 2467979
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||| |||||||||||| |||||||||| |||  |||||| |||||||||| ||| |||||||||| |||||   ||||||||||||||||    
T  2468066 ttccctacactttgttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttt---catcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 3005572 - 3005486
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| ||||| ||||||||| |||||| |||||||||| | | |||||||||| |||||   ||||||||||||||||    
T  3005572 ttccatacactttgttt-ggttgtttgattattacttgctccacacatcaagtattttattggtgtgatttt---catcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 15956358 - 15956443
Alignment:
Q  34 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||||||||||| ||||| |||| |||  |||||| |||||||||| |||||||||| ||| ||||||  ||||||||||||||||    
T  15956358 catacactttgttttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgattttt--catcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32339688 - 32339803
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||| ||| ||||||||||||||  |||||  |||||||| || ||||||||||||| ||    
T  32339688 ttttctacttttgacttgtattt--aattgttccatacactttgattttggttgcttgattatcccttgccccacacatc-aagttgttattggtgtgat 32339784  T
Q  100 tttttccatcgaattcacaaca 121  Q
    |||   |||||||||| |||||    
T  32339785 ttt---catcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44721222 - 44721314
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||| ||||| |||  |||| ||||||||||||||||| ||||||||||||||  ||| || |||||||| || |||||||||||||    
T  44721222 ttttctacttttgacttgtattt--aattattccatacactttgttttggttgcttgattatcccttactccacacatc-aagttgttattggtgt 44721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 5372145 - 5372023
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacacttt-gtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||||||| |||| ||| ||||||||||| |||  |||  ||||||||| |||   ||||| |||||||||| |||||||||| ||| ||    
T  5372145 ttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgtgat 5372046  T
Q  100 tttttccatcgaattcacaacagg 123  Q
    |||||  |||||||||| ||||||    
T  5372045 ttttt-tatcgaattcaaaacagg 5372023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 15185652 - 15185564
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||||| |||||||||| |||  ||| || |||||||||| |||||||||| ||| ||||||  || |||||||||||||    
T  15185652 ttccatacactttgttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtgattttt--caccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43082352 - 43082451
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| | |  |||||||||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||| |||    
T  43082352 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgatt 43082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41385118 - 41385180
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacac-tttgtttcggttgcttgattat 62  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||    
T  41385118 ttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattat 41385180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21482708 - 21482798
Alignment:
Q  31 ttccatacactttgtttc--ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||| |||   |||||||| |||||  |||||| |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  21482708 ttccatacactttattttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgattttt--catcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 24873124 - 24873038
Alignment:
Q  34 catacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaacag 122  Q
    ||||||||||||||  |||||||| |||||  |||||| |||||||||| || ||||||||||| ||||||  |||||||||||||||||    
T  24873124 catacactttgtttttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgattttt--catcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 1225567 - 1225644
Alignment:
Q  41 tttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcaca 118  Q
    ||||||| ||||||||||||||| |||| | |||||||||| | ||||||||| || ||| ||| |||| ||||||||    
T  1225567 tttgttttggttgcttgattattccttgttccacacatcaagtatgttattggcgtgattattttcatccaattcaca 1225644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43079981 - 43080080
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||| ||||| ||| ||| | |  |||||||||||||| |||||||| |||||   ||||| |||||||| || ||||||||||||| |||    
T  43079981 ttttctacttttgacttgtatttataacttt--catacactttgttttggttgcttaattatccattgctccacacatc-aagttgttattggtgtgatt 43080077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21480900 - 21480990
Alignment:
Q  31 ttccatacactttg--tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    ||||||||||||||  ||| ||||| |||||| |  ||| || |||||||||| ||| |||||||||| ||||||  ||||||||||||||||    
T  21480900 ttccatacactttgttttttggttgtttgattgtcacttactccacacatcaagtttattattggtgttattttt--catcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14347 - 14231
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  14347 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 14249  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  14248 tt---catcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15386 - 15436
Alignment:
Q  66 ttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcaca 118  Q
    |||||| ||||||||| |||||||||||||| ||||||  |||||||||||||    
T  15386 ttgcttgacacatcaagtttgttattggtgtgattttt--catcgaattcaca 15436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41439 - 41325
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| | |||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  41439 ttttctacttttggcttgtattt--aattgttccatacactttgttttgattgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 41343  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||||||||||||||||    
T  41342 tt---catcgaattcacaaca 41325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1407 - 1294
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||| | || || |||||||| || ||||||||||||| |||    
T  1407 ttttctacttttggcttgtattt--aattgttccatacactttgttttggttgcttgattatctttttctccacacatc-aagttgttattggtgtgatt 1311  T
Q  101 ttttccatcgaattcacaa 119  Q
    |||  ||||||||||||||    
T  1310 ttt--catcgaattcacaa 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1408 - 1308
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||||||| |||    
T  1408 ttttctacttttggcttgtattt--aattgttacatacactttgttttggttgcttgattatctcttgctccacacatc-aagttgttattggtgtgatt 1312  T
Q  101 tttt 104  Q
    ||||    
T  1311 tttt 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 85554 - 85667
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||| |||||||| ||||||| ||||||| ||  ||||||||||||| ||    
T  85554 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggtgtgat 85653  T
Q  100 tttttccatcgaattc 115  Q
    ||||  ||||||||||    
T  85654 tttt--catcgaattc 85667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 35928 - 36033
Alignment:
Q  9 ttttggcttgtgtttctaattgttccatacactttgtttc-ggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttcca 107  Q
    ||||||||||||||| |||||||| ||||||||||||||  |||||||||| |||  |||||| |||||||||| |||||||||||||||||||||  ||    
T  35928 ttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtaattttt--ca 36025  T
Q  108 tcgaattc 115  Q
    ||||||||    
T  36026 tcgaattc 36033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 80186 - 80282
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgt 96  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||  ||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  80186 ttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgttattggtgt 80282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 79512 - 79615
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||| |||||| | |||||  |||||| |||||||||| |||||||||||||| ||    
T  79512 ttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtgtgat 79611  T
Q  100 tttt 103  Q
    ||||    
T  79612 tttt 79615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 69248 - 69132
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| ||| ||| |  |||||||| ||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| |||    
T  69248 ttttctacttttggcttgtatttataact--tccatacattttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatt 69151  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||||||||||    
T  69150 tt---catcgaattcacaacag 69132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1606 - 1493
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||| ||||||||||||||| |||||| |||||||||||| | |||||||||| |||    
T  1606 ttttctacttttggcttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttgctccacacatcaaatat-ttattggtgtgatt 1511  T
Q  101 ttttccatcgaattcacaaca 121  Q
    ||   ||| ||||||||||||    
T  1510 tt---cattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 29502 - 29617
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||| | |||  |||||||||||||||||||||| | ||||||||||||  |||||| |||||||| || ||||||||||||| |||    
T  29502 ttttctacttttggcttttattt--aattgttccatacactttgttttgattgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 29598  T
Q  101 ttttccatcgaattcacaacag 122  Q
    ||   |||||||||| ||||||    
T  29599 tt---catcgaattcgcaacag 29617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 12827 - 12715
Alignment:
Q  4 tctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttt 103  Q
    |||||||||||||||| ||| ||| | |  |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||||||    
T  12827 tctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtcattttt 12731  T
Q  104 tccatcgaattcacaaca 121  Q
      ||||||||||||||||    
T  12730 --catcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4319 - 4410
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattg 92  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||  ||| | ||||||||||||  ||| || |||||||||| ||||||||||    
T  4319 ttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttattg 4410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 357 - 473
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  |||||| |||||||| || ||||||||||||| ||    
T  357 ttttctacttttggcttgtattt--aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 453  T
Q  100 tttttccatcgaattcacaaca 121  Q
    || |  || |||||||||||||    
T  454 ttct--caacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11434 - 11315
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactt--tgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaa 98  Q
    |||||||||||||||||||| || ||||||||||||||||||  | |||  ||||||| |||||| ||| || |||||||| || ||||||||||||| |    
T  11434 ttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatc-aagttgttattggtgtga 11336  T
Q  99 ttttttccatcgaattcacaac 120  Q
    | |||| |||||||||| ||||    
T  11335 tatttt-catcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6531 - 6646
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttg-tttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaat 99  Q
    ||||||||||||||||||| |||   ||| |||||||| ||||| ||| |||||||| |||||  |||||| |||||||| || ||||||||||||| ||    
T  6531 ttttctacttttggcttgtattt---attattccatacgctttgattttggttgcttaattatcccttgctccacacatc-aagttgttattggtgtgat 6626  T
Q  100 tttttccatcgaattcacaaca 121  Q
    ||||  ||||||||||||||||    
T  6627 tttt--catcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4633 - 4535
Alignment:
Q  1 ttttctacttttggcttgtgtttctaattgttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaatt 100  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||  |  |||||||||||||  ||| || ||||||||||| ||||||||||||| |||    
T  4633 ttttctacttttggcttgtattt--aattgttccatacgctttgactttgttgcttgattatcccttactccacacatcaaa-ttgttattggtgtgatt 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 16587 - 16501
Alignment:
Q  31 ttccatacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcacaaca 121  Q
    |||||| |||||||||| | ||||||||||||| |||||| |||||||||| | | |||||||| ||||||||   |||||||||||||||    
T  16587 ttccatgcactttgtttag-ttgcttgattattacttgctccacacatcaagtattttattggtataattttt---atcgaattcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 3243 - 3322
Alignment:
Q  34 catacactttgtttcggttgcttgattatttcttgcttcacacatcaaatttgttattggtgtaattttttccatcgaattcaca 118  Q
    |||||||||||||| ||||||||||||||  |||||| |||||||| || ||||||||||||| |||||   |||||||||||||    
T  3243 catacactttgttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttt---catcgaattcaca 3322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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