View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9108_low_1 (Length: 446)
Name: NF9108_low_1
Description: NF9108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9108_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 11 - 434
Target Start/End: Original strand, 36025885 - 36026308
Alignment:
| Q |
11 |
tggtgtttatttatgcttttcttagaacactttcttatttgtaatagttttgtgtcaaatgagtttatttataatctacgagccttacacaataatttaa |
110 |
Q |
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| T |
36025885 |
tggtgtttatttatgcttttcttagaacactttcttatttgtaatagttttgtgtcaaatgagtttatttataatctacgagccttacacaataatttaa |
36025984 |
T |
|
| Q |
111 |
catgataaatacaacctcaacctaaaatctgtcctctcaagtttgatatgtttggaggtatttgtagtattccgattcagaagaaattattatcgaatag |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025985 |
catgataaatacaacctcaacctaaaatctgtcctctcaagtttgatatgtttggaggtatttgtagtattccgattcagaagaaattattatcgaatag |
36026084 |
T |
|
| Q |
211 |
attgagttggatctcttgtgggttcttgctttacgaaatccgacacaatatttttccacggttctcttattcttttattacttctcttcattcaactatg |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36026085 |
attgagttggatctcttgtgggttcttgctttacgaaatccgacacaatatttttccccggttctcttattcttttattaattctcttcattcaactatg |
36026184 |
T |
|
| Q |
311 |
gttttactgtcagttgatatttaataagaggacgttctagtactatcnnnnnnnnnnnnntaagaggacgttccagaatatgatatttttccacaaatgc |
410 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36026185 |
gtcttactgtcagttgatatttaataagaggacgttctagtactatcaaaaaaataaaaataagaggacgttccagaatatgatatttttccacaaatgc |
36026284 |
T |
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| Q |
411 |
ttctggtaatgtagtatggagata |
434 |
Q |
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|||||||||||||||||||||||| |
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| T |
36026285 |
ttctggtaatgtagtatggagata |
36026308 |
T |
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