View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9114_low_12 (Length: 268)
Name: NF9114_low_12
Description: NF9114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9114_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 91 - 253
Target Start/End: Complemental strand, 29642001 - 29641839
Alignment:
| Q |
91 |
gaccttggtttccaaaactaagcaagagtgtgcatgcagaggaaccaatggagagaagctccctaatgagaaattatagaaatgaaatgaagtgaaaaat |
190 |
Q |
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| T |
29642001 |
gaccttggtttccaaaactaagcaagagtgtgcatgcagaggaaccaatggagagaagctccctaatgagaaattatagaaatgaaatgaagtgaaaaat |
29641902 |
T |
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| Q |
191 |
agctatagtttgataaaatatgtgactataatagagacaaaataagtatggggcctaaaaatt |
253 |
Q |
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| T |
29641901 |
agctatagtttgataaaatatgtgactataatagagacaaaataagtatggggcctaaaaatt |
29641839 |
T |
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