View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9115_1D_high_10 (Length: 308)
Name: NF9115_1D_high_10
Description: NF9115_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9115_1D_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 286
Target Start/End: Complemental strand, 37054411 - 37054146
Alignment:
| Q |
21 |
attgtcaccgcaaaattcattttcattattaccaaaccaattacctagttctccacaaaacacaaatgattctcaccaaccaccttatagtccaaaacaa |
120 |
Q |
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| T |
37054411 |
attgtcacctcaaaattcattttcattattaccaaaccaattacctagttctccacaaaacacaaatgattctcaccaaccaccttatagtccaaaacaa |
37054312 |
T |
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| Q |
121 |
aaagaccaagagattgaaaatgaaacctttgtccaatgtccacaaacatctaattcctctccacctcctccgccaccgccaccgccaacaccaccattga |
220 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| |
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| T |
37054311 |
aaagaccaagatattgaaaatgaaacctttgtccaatgtccacaaacatctaattcctctccacctcctcctccgccgccaccaccaacaccaccattga |
37054212 |
T |
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| Q |
221 |
aaatgccactctttactttacattcattaacaacttcatctagagtttcatctcattctccactct |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054211 |
aaatgccactctttactttacattcattaacaacttcatctagagtttcatctcattctccactct |
37054146 |
T |
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