View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9115_1D_low_31 (Length: 207)

Name: NF9115_1D_low_31
Description: NF9115_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9115_1D_low_31
NF9115_1D_low_31
[»] chr2 (32 HSPs)
chr2 (12-141)||(30972757-30972892)
chr2 (137-200)||(30714270-30714333)
chr2 (145-200)||(25298804-25298859)
chr2 (138-200)||(11176153-11176215)
chr2 (139-200)||(15700992-15701053)
chr2 (140-200)||(2986932-2986992)
chr2 (152-200)||(4587870-4587918)
chr2 (138-200)||(25884174-25884236)
chr2 (139-200)||(18538074-18538135)
chr2 (152-200)||(9787803-9787851)
chr2 (152-200)||(11175917-11175965)
chr2 (137-200)||(15700742-15700805)
chr2 (152-195)||(17368465-17368508)
chr2 (138-200)||(18537825-18537887)
chr2 (138-199)||(22191042-22191103)
chr2 (152-200)||(2986696-2986744)
chr2 (152-200)||(15735074-15735122)
chr2 (152-200)||(22191291-22191339)
chr2 (145-200)||(13652202-13652257)
chr2 (145-199)||(26829332-26829386)
chr2 (140-190)||(36464527-36464577)
chr2 (145-199)||(38716439-38716493)
chr2 (155-200)||(6763963-6764008)
chr2 (155-200)||(9787573-9787618)
chr2 (152-197)||(15735312-15735357)
chr2 (155-200)||(25299046-25299091)
chr2 (152-200)||(9051273-9051321)
chr2 (150-198)||(10857347-10857395)
chr2 (150-198)||(21631826-21631874)
chr2 (150-198)||(32661692-32661740)
chr2 (140-192)||(32677814-32677866)
chr2 (150-198)||(36286411-36286459)
[»] scaffold0419 (2 HSPs)
scaffold0419 (145-200)||(2964-3019)
scaffold0419 (152-200)||(3206-3254)
[»] chr1 (32 HSPs)
chr1 (145-200)||(4059525-4059580)
chr1 (140-200)||(46432214-46432274)
chr1 (145-200)||(48471866-48471921)
chr1 (137-200)||(2425469-2425532)
chr1 (145-200)||(28552308-28552363)
chr1 (145-200)||(43706657-43706712)
chr1 (139-200)||(28920897-28920958)
chr1 (145-200)||(24196507-24196562)
chr1 (145-200)||(46432462-46432517)
chr1 (137-195)||(27092848-27092906)
chr1 (138-200)||(51719119-51719181)
chr1 (139-200)||(16972096-16972157)
chr1 (152-200)||(3616809-3616857)
chr1 (152-200)||(3617044-3617092)
chr1 (152-200)||(24196271-24196319)
chr1 (153-200)||(24962199-24962246)
chr1 (140-199)||(35067046-35067105)
chr1 (150-200)||(16551652-16551702)
chr1 (150-200)||(19078169-19078219)
chr1 (150-200)||(19126059-19126109)
chr1 (145-195)||(24750020-24750070)
chr1 (139-200)||(4059768-4059829)
chr1 (152-200)||(24961963-24962011)
chr1 (152-200)||(50334728-50334776)
chr1 (145-200)||(16878931-16878986)
chr1 (145-200)||(21148193-21148248)
chr1 (137-199)||(51685809-51685871)
chr1 (152-200)||(2425235-2425283)
chr1 (139-195)||(2657762-2657818)
chr1 (152-200)||(24749807-24749855)
chr1 (150-198)||(41611249-41611297)
chr1 (152-200)||(43706899-43706947)
[»] chr3 (50 HSPs)
chr3 (139-200)||(28173726-28173787)
chr3 (145-200)||(8338943-8338998)
chr3 (137-200)||(34878524-34878587)
chr3 (139-200)||(13081140-13081201)
chr3 (140-200)||(22447738-22447798)
chr3 (140-200)||(25179821-25179881)
chr3 (145-200)||(27852756-27852811)
chr3 (15-141)||(32202113-32202246)
chr3 (152-200)||(26628035-26628083)
chr3 (152-200)||(28154892-28154940)
chr3 (145-200)||(3328816-3328871)
chr3 (137-195)||(32960640-32960698)
chr3 (151-200)||(6927715-6927764)
chr3 (139-196)||(52281594-52281651)
chr3 (152-200)||(3329059-3329107)
chr3 (140-200)||(22500594-22500654)
chr3 (140-200)||(46673043-46673103)
chr3 (152-200)||(48907537-48907585)
chr3 (140-196)||(52276302-52276358)
chr3 (145-200)||(8542856-8542911)
chr3 (137-200)||(40836424-40836487)
chr3 (154-200)||(10743421-10743467)
chr3 (138-200)||(22447990-22448052)
chr3 (140-198)||(48907291-48907349)
chr3 (139-200)||(1743495-1743556)
chr3 (140-197)||(25022662-25022719)
chr3 (155-200)||(26628271-26628316)
chr3 (138-195)||(36311148-36311205)
chr3 (152-200)||(8339186-8339234)
chr3 (152-200)||(13080904-13080952)
chr3 (152-200)||(25179588-25179636)
chr3 (152-200)||(27852997-27853045)
chr3 (145-200)||(1743258-1743313)
chr3 (140-199)||(19984847-19984906)
chr3 (145-200)||(20001954-20002008)
chr3 (145-200)||(23428622-23428677)
chr3 (153-200)||(33279830-33279877)
chr3 (138-200)||(4521950-4522012)
chr3 (140-198)||(5001198-5001256)
chr3 (156-193)||(1437330-1437367)
chr3 (140-200)||(4522200-4522258)
chr3 (137-198)||(5029728-5029788)
chr3 (100-141)||(16217466-16217507)
chr3 (12-81)||(16217534-16217603)
chr3 (155-200)||(23428865-23428910)
chr3 (150-198)||(2181323-2181371)
chr3 (150-198)||(17258188-17258236)
chr3 (140-196)||(28262191-28262246)
chr3 (140-196)||(28263158-28263214)
chr3 (150-198)||(51224934-51224982)
[»] chr7 (42 HSPs)
chr7 (136-200)||(24597511-24597575)
chr7 (145-200)||(3562436-3562491)
chr7 (145-200)||(8527040-8527095)
chr7 (145-200)||(20636864-20636919)
chr7 (145-200)||(27869199-27869254)
chr7 (140-200)||(19919602-19919662)
chr7 (137-200)||(48175957-48176021)
chr7 (145-200)||(11843181-11843236)
chr7 (145-200)||(42271578-42271633)
chr7 (153-200)||(48176208-48176255)
chr7 (138-200)||(26385507-26385569)
chr7 (152-200)||(18754512-18754560)
chr7 (145-200)||(13577790-13577845)
chr7 (98-141)||(16300474-16300517)
chr7 (137-200)||(19919847-19919910)
chr7 (145-200)||(31494156-31494211)
chr7 (27-141)||(16253889-16254011)
chr7 (140-200)||(10023784-10023844)
chr7 (152-200)||(17305774-17305822)
chr7 (152-200)||(31493921-31493969)
chr7 (150-197)||(5490924-5490971)
chr7 (145-200)||(7365224-7365279)
chr7 (153-200)||(13578030-13578077)
chr7 (137-200)||(20636614-20636677)
chr7 (137-200)||(20638486-20638549)
chr7 (139-198)||(34174028-34174086)
chr7 (145-200)||(39182179-39182234)
chr7 (145-191)||(2331273-2331319)
chr7 (151-197)||(5490513-5490559)
chr7 (138-200)||(43517158-43517220)
chr7 (139-200)||(3562678-3562739)
chr7 (145-198)||(15681878-15681931)
chr7 (152-197)||(21224601-21224646)
chr7 (112-141)||(40504646-40504675)
chr7 (155-200)||(42271346-42271391)
chr7 (150-198)||(10691306-10691354)
chr7 (152-200)||(21690426-21690474)
chr7 (140-200)||(23373667-23373727)
chr7 (140-200)||(24448043-24448103)
chr7 (152-200)||(24597761-24597809)
chr7 (152-200)||(27869441-27869489)
chr7 (152-200)||(36746749-36746796)
[»] chr6 (37 HSPs)
chr6 (140-200)||(4597403-4597463)
chr6 (140-200)||(35102489-35102549)
chr6 (137-200)||(15298730-15298793)
chr6 (145-200)||(18791603-18791659)
chr6 (145-200)||(4013911-4013966)
chr6 (150-200)||(14572186-14572236)
chr6 (139-200)||(24051006-24051067)
chr6 (140-200)||(18749095-18749155)
chr6 (139-195)||(22968404-22968460)
chr6 (139-195)||(23819933-23819989)
chr6 (152-200)||(26710553-26710601)
chr6 (147-187)||(32682378-32682418)
chr6 (137-200)||(32451972-32452035)
chr6 (137-199)||(6842327-6842389)
chr6 (138-200)||(8412754-8412816)
chr6 (140-197)||(3118926-3118983)
chr6 (145-190)||(31211047-31211092)
chr6 (152-200)||(4597651-4597699)
chr6 (152-200)||(18749374-18749422)
chr6 (150-198)||(28574564-28574612)
chr6 (152-200)||(32451736-32451784)
chr6 (145-200)||(8415294-8415349)
chr6 (145-200)||(25819930-25819985)
chr6 (145-200)||(34834170-34834225)
chr6 (140-198)||(27322113-27322170)
chr6 (155-200)||(12291430-12291475)
chr6 (139-200)||(14572422-14572483)
chr6 (139-200)||(18791355-18791416)
chr6 (138-195)||(24603611-24603668)
chr6 (151-200)||(34528393-34528442)
chr6 (150-198)||(2018575-2018623)
chr6 (150-198)||(11623167-11623215)
chr6 (150-198)||(12203900-12203948)
chr6 (156-200)||(15298500-15298544)
chr6 (152-200)||(25819695-25819743)
chr6 (152-200)||(31210804-31210852)
chr6 (152-196)||(35102713-35102757)
[»] chr5 (26 HSPs)
chr5 (140-200)||(18695248-18695308)
chr5 (145-200)||(40428642-40428697)
chr5 (139-200)||(31055312-31055373)
chr5 (137-193)||(31648237-31648293)
chr5 (145-200)||(16901000-16901055)
chr5 (140-195)||(23765418-23765473)
chr5 (140-195)||(23815266-23815321)
chr5 (145-200)||(24025024-24025079)
chr5 (145-200)||(26639040-26639095)
chr5 (145-193)||(8646002-8646050)
chr5 (145-200)||(245840-245895)
chr5 (145-200)||(19169589-19169644)
chr5 (137-200)||(20654040-20654103)
chr5 (153-200)||(25557120-25557167)
chr5 (135-200)||(245589-245654)
chr5 (140-200)||(16307475-16307535)
chr5 (152-200)||(17704828-17704876)
chr5 (152-200)||(38408639-38408687)
chr5 (137-200)||(23765635-23765698)
chr5 (137-200)||(23815483-23815546)
chr5 (145-200)||(25556880-25556934)
chr5 (138-200)||(2373391-2373453)
chr5 (145-179)||(36641405-36641439)
chr5 (152-200)||(8645807-8645855)
chr5 (137-197)||(17441155-17441215)
chr5 (152-200)||(18695014-18695062)
[»] chr8 (32 HSPs)
chr8 (137-200)||(44147216-44147279)
chr8 (138-200)||(8802396-8802458)
chr8 (14-141)||(15257526-15257661)
chr8 (138-200)||(21929843-21929905)
chr8 (139-200)||(4518866-4518927)
chr8 (140-200)||(4807598-4807658)
chr8 (152-200)||(5192282-5192330)
chr8 (139-200)||(19392812-19392873)
chr8 (152-200)||(12723507-12723555)
chr8 (153-200)||(8802645-8802692)
chr8 (137-200)||(33895619-33895682)
chr8 (150-197)||(34602022-34602069)
chr8 (150-200)||(21666519-21666569)
chr8 (139-196)||(32968453-32968510)
chr8 (140-200)||(19391386-19391445)
chr8 (152-200)||(21930047-21930095)
chr8 (150-198)||(23936287-23936335)
chr8 (152-200)||(30784510-30784558)
chr8 (152-200)||(44146982-44147030)
chr8 (145-200)||(12723264-12723319)
chr8 (145-200)||(22452176-22452231)
chr8 (153-200)||(23565132-23565179)
chr8 (153-200)||(23565335-23565382)
chr8 (150-197)||(27453534-27453581)
chr8 (145-196)||(38974798-38974849)
chr8 (145-196)||(38980091-38980142)
chr8 (145-196)||(39005896-39005947)
chr8 (145-196)||(39011188-39011239)
chr8 (138-199)||(11456634-11456695)
chr8 (152-200)||(4519113-4519161)
chr8 (152-200)||(17648253-17648301)
chr8 (152-200)||(30784275-30784323)
[»] chr4 (30 HSPs)
chr4 (140-200)||(13826418-13826478)
chr4 (140-200)||(43793629-43793689)
chr4 (145-200)||(4357497-4357552)
chr4 (145-200)||(13394539-13394594)
chr4 (145-200)||(13397678-13397733)
chr4 (145-195)||(15058823-15058873)
chr4 (100-141)||(8913070-8913111)
chr4 (140-200)||(4433181-4433241)
chr4 (145-200)||(5304350-5304405)
chr4 (145-200)||(25011980-25012035)
chr4 (152-200)||(25011745-25011793)
chr4 (145-200)||(9195665-9195720)
chr4 (137-200)||(41877270-41877333)
chr4 (145-200)||(47869899-47869954)
chr4 (145-199)||(3928902-3928956)
chr4 (139-200)||(19232340-19232401)
chr4 (152-200)||(9195908-9195956)
chr4 (152-200)||(18259357-18259405)
chr4 (145-200)||(27018460-27018516)
chr4 (152-200)||(43793876-43793924)
chr4 (145-200)||(6788961-6789016)
chr4 (145-200)||(9397435-9397490)
chr4 (140-191)||(20919333-20919384)
chr4 (137-179)||(2931586-2931628)
chr4 (139-200)||(5304591-5304652)
chr4 (152-197)||(6789207-6789252)
chr4 (152-200)||(4357262-4357310)
chr4 (152-200)||(13397921-13397969)
chr4 (150-198)||(40489219-40489267)
chr4 (139-195)||(45633435-45633491)
[»] scaffold0150 (1 HSPs)
scaffold0150 (138-200)||(6076-6138)
[»] scaffold0062 (4 HSPs)
scaffold0062 (139-200)||(49904-49965)
scaffold0062 (139-200)||(62443-62504)
scaffold0062 (137-200)||(49654-49717)
scaffold0062 (137-200)||(62193-62256)
[»] scaffold0607 (1 HSPs)
scaffold0607 (145-200)||(2051-2106)
[»] scaffold0007 (1 HSPs)
scaffold0007 (145-200)||(250521-250576)
[»] scaffold0179 (2 HSPs)
scaffold0179 (140-200)||(5648-5708)
scaffold0179 (152-200)||(5895-5943)
[»] scaffold0002 (1 HSPs)
scaffold0002 (145-200)||(455274-455329)
[»] scaffold0060 (1 HSPs)
scaffold0060 (145-195)||(66424-66474)
[»] scaffold0683 (2 HSPs)
scaffold0683 (155-200)||(5133-5178)
scaffold0683 (152-200)||(5300-5348)
[»] scaffold1875 (1 HSPs)
scaffold1875 (140-200)||(754-814)
[»] scaffold0406 (1 HSPs)
scaffold0406 (140-200)||(2236-2296)
[»] scaffold0025 (3 HSPs)
scaffold0025 (152-200)||(61824-61872)
scaffold0025 (153-200)||(19296-19343)
scaffold0025 (145-200)||(62064-62119)
[»] scaffold0227 (1 HSPs)
scaffold0227 (145-196)||(166-217)
[»] scaffold0024 (1 HSPs)
scaffold0024 (145-200)||(43827-43882)
[»] scaffold0087 (1 HSPs)
scaffold0087 (147-200)||(24969-25022)


Alignment Details
Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 30972757 - 30972892
Alignment:
Q  12 cctgtgagacaaagtagctatatcaagatatagcgttgtgtatctcaaagactaaatatgatttgaaccagctagagctctgagcg--------agctat 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||        ||||||    
T  30972757 cctgtgagacaaagtagctatatcaagatatagcgttgtgtatctc--atactaaatatgatttgaaccagctagagctctgagcgacacatgcagctat 30972854  T
Q  104 acctaagctatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  30972855 acctaagttatagctctgtaaatcgcagtaatgtttta 30972892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 30714270 - 30714333
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  30714270 ttttaggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 30714333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 25298804 - 25298859
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  25298804 taaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcctcctatt 25298859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 11176215 - 11176153
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||||||||||||| ||| |||||||||||||||| |||||||||| |||||||||    
T  11176215 tttaggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctatt 11176153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 15701053 - 15700992
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  15701053 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatt 15700992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 2986992 - 2986932
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||    
T  2986992 taggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggccccctatt 2986932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 4587870 - 4587918
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4587870 cacttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 4587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25884174 - 25884236
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| ||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  25884174 tttaggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctatt 25884236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 18538135 - 18538074
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  18538135 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 18538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 9787851 - 9787803
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  9787851 cacttttcgccccctatgtttcaaaatattgcaattttggccccctatt 9787803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 11175917 - 11175965
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  11175917 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 11175965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 15700742 - 15700805
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||| ||||||||||||| || |||| |||||| ||||||||||| ||||||||    
T  15700742 ttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctatt 15700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 17368508 - 17368465
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  17368508 cacttttcgccccctatgtttcaaaatgttgcaattttggcccc 17368465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 18537825 - 18537887
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| ||||||||||| ||||||||||| |||||| ||| ||||||| ||||||||    
T  18537825 tttaggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttggtcccctatt 18537887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 22191042 - 22191103
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||||| |||| | ||||||||| ||||||||||| |||||| ||| |||||||||||||||    
T  22191042 tttaggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttggccccctat 22191103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 2986696 - 2986744
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||  || ||||||||||| ||||||||||||||||||||    
T  2986696 cacttttcgccctttaagtttcaaaatgttgcgattttggccccctatt 2986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 15735074 - 15735122
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  15735074 cacttttcgccctctaagtttcaaaatgttgcgattttggtcccctatt 15735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 22191339 - 22191291
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||| |||||||||||||||| ||| ||||||| ||||||||    
T  22191339 cacttttcgcctcctatgtttcaaaatgttgcaattttggtcccctatt 22191291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 13652257 - 13652202
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||| |||| |||| |||||| ||||| |||||||| |||||    
T  13652257 taaagtgcacttttcgcctcctaagttttaaaatgttgcgagtttggccctctatt 13652202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 26829386 - 26829332
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||||||||||||||  ||| || |||| |||||| |||||||||||||||||||    
T  26829386 taaagtgcacttttcatcccttaagttttaaaatgttgcgattttggccccctat 26829332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 36464577 - 36464527
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttg 190  Q
    |||| |||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  36464577 taggttaaactgcacttttcgcctcctaagtttcaaaatgttgcgattttg 36464527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 38716493 - 38716439
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||| |||||||||| || |||||||||||||||| ||| |||||| ||||||||    
T  38716493 taaactgcacttttcacctcctatgtttcaaaatgttgcaattttgaccccctat 38716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 6764008 - 6763963
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  6764008 ttttcgccctctaagtttcaaaatgttgcgattttggtcccctatt 6763963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 9787573 - 9787618
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||| |||||| ||| |||||| |||||||||    
T  9787573 ttttcgccccctatgttttaaaatgttgcaattttgaccccctatt 9787618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 15735357 - 15735312
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    ||||||||||||||||||||| |||||| ||| ||||||| |||||    
T  15735357 cacttttcgccccctatgttttaaaatgttgcaattttggtcccct 15735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 25299091 - 25299046
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  25299091 ttttcgccctctaagtttcaaaatgttgcgattttagccccctatt 25299046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 9051321 - 9051273
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| |||||||||| |||||||||    
T  9051321 cacttttcgccctctaagttttaaaatgttgcgattttgaccccctatt 9051273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 10857347 - 10857395
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  10857347 tgcacttttggccccctatctttccaaaagttgcgattttggcccccta 10857395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 21631826 - 21631874
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||  | | ||||||||||||||||||    
T  21631826 tgcacttttggccccctatgtttcatgaagttgcgattttggcccccta 21631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 32661740 - 32661692
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  32661740 tgcacttttggccccctatctttccaaaagttgcgattttggcccccta 32661692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 32677814 - 32677866
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggc 192  Q
    |||| ||||||||| |||||||| |||| |||| |||||| ||||||||||||    
T  32677814 taggctaaagtgcatttttcgcctcctaagttttaaaatgttgcgattttggc 32677866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 36286459 - 36286411
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  36286459 tgcacttttggccccctatctttccaaaagttgcgattttggcccccta 36286411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 2964 - 3019
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2964 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 3254 - 3206
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||| |||||| |||||||||    
T  3254 cacttttcgccctctaagtttcaaaatgttgcaattttgaccccctatt 3206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 4059525 - 4059580
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4059525 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 4059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 46432214 - 46432274
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  46432214 taggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 46432274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 48471866 - 48471921
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  48471866 taaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggccccctatt 48471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 2425532 - 2425469
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  2425532 ttttaggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctatt 2425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 28552308 - 28552363
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  28552308 taaagtgcacttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 43706657 - 43706712
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  43706657 taaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 43706712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 28920958 - 28920897
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  28920958 ttaggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 28920897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 24196562 - 24196507
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  24196562 taaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctatt 24196507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 46432517 - 46432462
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  46432517 taaagtccacttttcgccccttaagtttcaaaatgttgcgattttggccccctatt 46432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 27092848 - 27092906
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||||| |||| ||||||| |||||||||||||||||||||| | |||||||||||||    
T  27092848 ttttaggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcccc 27092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 51719119 - 51719181
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| |||||||||||||| |||||||||| |||| ||| ||||||||||||||||    
T  51719119 tttaggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggccccctatt 51719181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 16972157 - 16972096
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| |||||||||||||||||| |||| |||||| ||||||||| ||||||||||    
T  16972157 ttaggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctatt 16972096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 3616809 - 3616857
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3616809 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 3616857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 3617092 - 3617044
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  3617092 cacttttcgccccctatgtttcaaaatgttgcaattttcgccccctatt 3617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 24196271 - 24196319
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  24196271 cacttttcgccccctaagtttcaaaatgttgcgattttggccctctatt 24196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 24962246 - 24962199
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||    
T  24962246 acttttcgccccctatgtttcaaaatgttgcagttttggccccctatt 24962199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 35067105 - 35067046
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||| ||||||||||||||| |||| || ||||||||| | |||||||||||||||||||    
T  35067105 taggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctat 35067046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 16551652 - 16551702
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  16551652 tgcacttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 16551702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 19078219 - 19078169
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||    
T  19078219 tgcactttttgccctctatgtttcaaaatgttgcaattttggccccctatt 19078169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 19126109 - 19126059
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||    
T  19126109 tgcactttttgccctctatgtttcaaaatgttgcaattttggccccctatt 19126059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 24750070 - 24750020
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||| ||||||||||||||||||||||| |||||| ||| |||||||||||    
T  24750070 taaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccc 24750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 4059829 - 4059768
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  4059829 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagccccctatt 4059768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 24961963 - 24962011
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  24961963 cacttttcgccctctaagtttcaaaatgttgtgattttggccccctatt 24962011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 50334728 - 50334776
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||||||||    
T  50334728 cacttttcgccccctaagttttaaaatgttgcaattttggccccctatt 50334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 16878986 - 16878931
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||| |||| ||||||||||| || |||||||| ||||||||    
T  16878986 taaactgcacttttcgccacctaagtttcaaaatgttgagattttggtcccctatt 16878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 21148248 - 21148193
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||| ||||||  ||| |||||| ||||||||||||||||||||    
T  21148248 taaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctatt 21148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 51685871 - 51685809
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    ||||||| ||||||||||||||| ||| |||  |||||||| | |||||||||||||| ||||    
T  51685871 ttttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctat 51685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 2425235 - 2425283
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| ||| |||| ||||||||||| |||||||||| |||||||||    
T  2425235 cactttttgccacctaagtttcaaaatgttgcgattttgaccccctatt 2425283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 2657818 - 2657762
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||| |||| | |||||||||||||||| ||||||||||  |||||||||| ||||    
T  2657818 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc 2657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 24749807 - 24749855
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| || ||| ||||||||||| |||||||||||||| |||||    
T  24749807 cacttttcgtcctctaagtttcaaaatgttgcgattttggcccactatt 24749855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 41611249 - 41611297
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  41611249 tgcacttttggccccctatttttccaaaagttgcgattttggcccccta 41611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 43706947 - 43706899
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| ||||||||  ||| |||||| ||||||||||||||||||||    
T  43706947 cactttttgccccctaatttttaaaatgttgcgattttggccccctatt 43706899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 8e-20; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 28173726 - 28173787
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28173726 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 28173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 8338943 - 8338998
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8338943 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 8338998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 34878524 - 34878587
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  34878524 ttttaggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctatt 34878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 13081201 - 13081140
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  13081201 ttaggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctatt 13081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 22447738 - 22447798
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 22447798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 25179881 - 25179821
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  25179881 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttatt 25179821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 27852756 - 27852811
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  27852756 taaagtgcacttttcgccccctatgtttcaaaatgttgcaattttagccccctatt 27852811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 32202246 - 32202113
Alignment:
Q  15 gtgagacaaagtagctatatcaagatatagcgttgtgtatctcaaagactaaatatgatttgaaccagctagagctctgagc--------gagctatacc 106  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||| |||||||| ||| |||||||| | || | ||||||||         ||||||| |    
T  32202246 gtgagacatagtagttatatcaggatatagcgttgggtatctcagagactaaagatgttttgaaccggttata-ctctgagctacacatgcagctatatc 32202148  T
Q  107 taagctatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||| | |||||||||||||||||||||||||    
T  32202147 taagctacaactctgtaaatcgcagtaatgtttta 32202113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 26628035 - 26628083
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  26628035 cacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 26628083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 28154892 - 28154940
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  28154892 cacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 28154940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 3328816 - 3328871
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  3328816 taaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctatt 3328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 32960640 - 32960698
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||||| |||| |||| ||||||||||||||||||||||||| ||| |||||||||||    
T  32960640 ttttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccc 32960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 6927764 - 6927715
Alignment:
Q  151 gcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  6927764 gcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 6927715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 52281651 - 52281594
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||||||    
T  52281651 ttaggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccc 52281594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 3329107 - 3329059
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3329107 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 3329059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 22500594 - 22500654
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||| |||||||||||||||||  ||| ||||||||||||||||    
T  22500594 taggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggccccctatt 22500654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 46673043 - 46673103
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||| | ||||||||||| |||| ||| ||||||||||||||||    
T  46673043 taggctaaagtgcacttttcgtctcctatgtttcataatgttgcaattttggccccctatt 46673103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 48907585 - 48907537
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  48907585 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 48907537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 52276302 - 52276358
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    |||| ||||||||||||||| |||||||| |||||||| | ||||||||||||||||    
T  52276302 taggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccc 52276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 8542911 - 8542856
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| | |||||||||| |||||| || |||||||||||||||||    
T  8542911 taaagtgcacttttcactccctatgttttaaaatgttgtgattttggccccctatt 8542856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 40836487 - 40836424
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| |||| ||||||||||||| |||| |||||| |||||||||| |||||||||    
T  40836487 ttttaggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttgaccccctatt 40836424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 10743421 - 10743467
Alignment:
Q  154 cttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||    
T  10743421 cttttcgccccctaagttttaaaatgttgcgattttggccccctatt 10743467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 22448052 - 22447990
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| |||||||||||||| ||| |||| |||||| ||| ||||||||||||||||    
T  22448052 tttaggttaaactgcacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 22447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 48907291 - 48907349
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    |||| ||||||||||||||  ||||||||||||||||||| || ||||||| |||||||    
T  48907291 taggctaaagtgcacttttgaccccctatgtttcaaaatgttgtgattttgacccccta 48907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 1743556 - 1743495
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| |||||||||||| ||||| |||| |||||| ||||||||||| ||||||||    
T  1743556 ttaggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctatt 1743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 25022662 - 25022719
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||| |||||||||||||| ||||| ||||||||| |||  |||||||||||||||||    
T  25022662 taggctaaagtgcactttttgccccatatgtttcataatattgcgattttggccccct 25022719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 26628316 - 26628271
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  26628316 ttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 26628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 36311148 - 36311205
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||||| |||| ||||||||||| |||||| |||| |||||| |||||||||||||||    
T  36311148 tttaggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggcccc 36311205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 8339234 - 8339186
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  8339234 cacttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 8339186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 13080904 - 13080952
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  13080904 cacttttcgccctctaagtttcaaaatgttgcgattttggctccctatt 13080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 25179588 - 25179636
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  25179588 cacttttcgccctctaagttttaaaatgttgcgattttggccccctatt 25179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 27853045 - 27852997
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  27853045 cacttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 27852997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 1743258 - 1743313
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||| ||||| ||||||||||| | ||||||| ||||||||||    
T  1743258 taaactgcacttttcgcaccctaagtttcaaaatgtttcgattttagccccctatt 1743313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 19984847 - 19984906
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||| ||||||||||||||| ||||||| |||||||||   ||| |||||||||||||||    
T  19984847 taggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctat 19984906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 20002008 - 20001954
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||| |||| || ||||||||||| ||||||||||||||||||||    
T  20002008 taaactgcacttttctcccc-taagtttcaaaatgttgcgattttggccccctatt 20001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 23428622 - 23428677
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||||| | ||||||||    
T  23428622 taaactgcacttttcgccccctatgtttcataatgttgcaattttagtcccctatt 23428677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 33279877 - 33279830
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| |||| |||||| |||||||||| |||||||||    
T  33279877 acttttcgccccctaagttttaaaatgttgcgattttgaccccctatt 33279830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 4521950 - 4522012
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| | ||||||||||||  || |||| |||||| ||||||||||||||||||||    
T  4521950 tttaggttaaacttcacttttcgccctataagttttaaaatgttgcgattttggccccctatt 4522012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 5001198 - 5001256
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    |||| |||||||||||||||  ||||||| |||||||||  ||| ||||||||||||||    
T  5001198 taggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggcccccta 5001256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 1437367 - 1437330
Alignment:
Q  156 tttcgccccctatgtttcaaaatgctgcgattttggcc 193  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  1437367 tttcgtcccctaagtttcaaaatgctgcgattttggcc 1437330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 4522258 - 4522200
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||| |||||||| |||||   | |||||||||||||||||    
T  4522258 taggctaaagtgcacttttcgccctctatgttttaaaat--agtgattttggccccctatt 4522200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 5029788 - 5029728
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||| ||||||||||||||| |||||||| |||||||||  ||| ||||||||| ||||    
T  5029788 ttttaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcctccta 5029728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 16217507 - 16217466
Alignment:
Q  100 ctatacctaagctatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  16217507 ctatacctaagttatagctctgtaaaccgctgtaatgtttta 16217466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 16217603 - 16217534
Alignment:
Q  12 cctgtgagacaaagtagctatatcaagatatagcgttgtgtatctcaaagactaaatatgatttgaacca 81  Q
    ||||||||||| ||||| | ||||| |||||  || ||||||||||| |||||||| ||| |||||||||    
T  16217603 cctgtgagacatagtagttgtatcatgatatgtcgatgtgtatctcagagactaaagatgctttgaacca 16217534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 23428910 - 23428865
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||| ||||||||||| | | ||||||||||||||||    
T  23428910 ttttcgccccctaagtttcaaaatgttacaattttggccccctatt 23428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 2181323 - 2181371
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||| | | ||||||||||| ||||||    
T  2181323 tgcacttttggccccctatgtttcaagaagttgcgattttggaccccta 2181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 17258236 - 17258188
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||| | | ||||||||||| ||||||    
T  17258236 tgcacttttggccccctatgtttcaagaagttgcgattttggaccccta 17258188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 28262191 - 28262246
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    |||| ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  28262191 taggctaaagtgcacttttc-ccccctaactttcaaaacgttgcgattttggccccc 28262246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 28263214 - 28263158
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    |||| ||||||||||||||| |||||||  ||| |||| | ||||||||||||||||    
T  28263214 taggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccc 28263158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 51224934 - 51224982
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||| |||||||||||| | | ||||||||||||||||||    
T  51224934 tgcacttttggcctcctatgtttcaagaagttgcgattttggcccccta 51224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 24597511 - 24597575
Alignment:
Q  136 gttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  24597511 gttttaggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctatt 24597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 3562436 - 3562491
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  3562436 taaagtgcacttttcgctccctatgtttcaaaatgttgcgattttggccccctatt 3562491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 8527095 - 8527040
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8527095 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctatt 8527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 20636919 - 20636864
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  20636919 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 20636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 27869199 - 27869254
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  27869199 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 27869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 19919602 - 19919662
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||    
T  19919602 taggttaaagtgcacttttcgccccctatattttaaaatgttgcgattttggccccttatt 19919662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 48175957 - 48176021
Alignment:
Q  137 ttttagggtaaagtgcactttt-cgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  48175957 ttttaggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctatt 48176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 11843181 - 11843236
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||| |||||||    
T  11843181 taaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctatt 11843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 42271633 - 42271578
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  42271633 taaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgccccctatt 42271578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 48176255 - 48176208
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  48176255 acttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 48176208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 26385569 - 26385507
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| ||||||||  |||||||| ||||||||||| ||||||||||||||||||||    
T  26385569 tttaggataaactgcactttctgccccctaagtttcaaaatgttgcgattttggccccctatt 26385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 18754560 - 18754512
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  18754560 cacttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 18754512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 13577790 - 13577845
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||| |||| | ||||||||||||||| ||||||||||||||||||||    
T  13577790 taaactgcacttctcgctctctatgtttcaaaatgttgcgattttggccccctatt 13577845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 16300517 - 16300474
Alignment:
Q  98 agctatacctaagctatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  16300517 agctatacctaagttatagctatgtaaatcgcagtaatgtttta 16300474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 19919910 - 19919847
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | |||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  19919910 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctatt 19919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 31494211 - 31494156
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||| | ||||||||||||||| ||||||||||||||||||||    
T  31494211 taaactgcatttttcgcactctatgtttcaaaatgttgcgattttggccccctatt 31494156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 16253889 - 16254011
Alignment:
Q  27 agctatatcaagatatagcgttgtgtatctcaaagactaaatatgatttgaaccagctagagctctgagcga--------gctatacctaagctatagct 118  Q
    |||||||| | ||||||||  |||||||| || ||||||||| || |||||||| |||| |||||| || ||        | |||||||||| |||||||    
T  16253889 agctatataaggatatagccctgtgtatcgcagagactaaatttgctttgaaccggctatagctctaagagacacttgaagttatacctaagttatagct 16253988  T
Q  119 ctgtaaatcgcagtaatgtttta 141  Q
     ||||||||||||||||||||||    
T  16253989 atgtaaatcgcagtaatgtttta 16254011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 10023784 - 10023844
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||    
T  10023784 taggttaaactgcacttttcgccccctatattttaaaatgttgcgagtttgaccccctatt 10023844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 17305774 - 17305822
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| || ||| ||||||||||| ||||||||||||||||||||    
T  17305774 cacttttcgtcctctaagtttcaaaatgttgcgattttggccccctatt 17305822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 31493921 - 31493969
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  31493921 cacttttcggcccctaagtttcaaaatgttacgattttggccccctatt 31493969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 5490971 - 5490924
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||||||||| ||||||||||||||||| | ||| |||||||||||||    
T  5490971 tgcacttttcaccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 7365224 - 7365279
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||| ||||||||||||||||||| |||||| | ||||||| ||||||||||    
T  7365224 taaactgcgcttttcgccccctatgttttaaaatgttacgatttttgccccctatt 7365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 13578077 - 13578030
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| ||||||||||| |||||||||| ||| |||||    
T  13578077 acttttcgccccctaagtttcaaaatgttgcgattttgaccctctatt 13578030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 20636614 - 20636677
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | ||||||| |||| ||| |||| |||||| ||||||||||||||||||||    
T  20636614 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctatt 20636677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 20638486 - 20638549
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | ||||||| |||| ||| |||| |||||| ||||||||||||||||||||    
T  20638486 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctatt 20638549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 34174086 - 34174028
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||| ||||||||||||||| |||||||| |||||||||  ||| ||||||||||||||    
T  34174086 ttaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 34174028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 39182234 - 39182179
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||||| |||| |||||| ||| |||||| |||||||||    
T  39182234 taaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctatt 39182179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 2331319 - 2331273
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttgg 191  Q
    |||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  2331319 taaactgcacttttcgccccctatgttttaaaatgttgcaattttgg 2331273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 5490513 - 5490559
Alignment:
Q  151 gcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    ||||||||| |||| |||||||||||| | |||||||||||||||||    
T  5490513 gcacttttcaccccttatgtttcaaaaagttgcgattttggccccct 5490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 43517220 - 43517158
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| | |||||||||||||| || ||| |||| |||||| ||||||||||||| ||||||    
T  43517220 tttaggctgaagtgcacttttcgtccactaagttttaaaatgttgcgattttggcctcctatt 43517158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 3562739 - 3562678
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | ||||||||| || ||| ||||||||||| | ||||||||||||||||||    
T  3562739 ttaggttaaacttcacttttcgtcctctaagtttcaaaatgttacgattttggccccctatt 3562678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 15681931 - 15681878
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    |||| ||||||||| | |||||| ||||||||||| ||||||||||||| ||||    
T  15681931 taaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctccta 15681878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 21224646 - 21224601
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  21224646 cacttttcgccctctaagtttcaaaatgttgcgattttgaccccct 21224601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 40504675 - 40504646
Alignment:
Q  112 tatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||||||||||||||||||||||||||    
T  40504675 tatagctctgtaaatcgcagtaatgtttta 40504646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 42271346 - 42271391
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  42271346 ttttcgccctctaagtttcaaaatgttgcgattttggcctcctatt 42271391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 10691306 - 10691354
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    |||| |||| |||||||||||||||| | | ||||||||||||||||||    
T  10691306 tgcaattttggccccctatgtttcaagaagttgcgattttggcccccta 10691354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 21690426 - 21690474
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||||||||||||||  ||| ||||||||||| ||||    
T  21690426 cacttttcgtcccctatgtttcaaaatcttgcaattttggccccttatt 21690474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 23373727 - 23373667
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||| | ||||||||||||| |||| |||||| |||||||||  |||||||||    
T  23373727 taggttaaagtgtatttttcgccccctaagttttaaaatgttgcgattttaaccccctatt 23373667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 24448043 - 24448103
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||||||||| | |||| |||||| ||||||||||  ||||||||    
T  24448043 taggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctatt 24448103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 24597809 - 24597761
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| |||||||||| |||||||||    
T  24597809 cacttttcgccctctaagttttaaaatgttgcgattttgtccccctatt 24597761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 27869489 - 27869441
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| |||||||||||  |||||||    
T  27869489 cacttttcgccctctaagtttcaaaatgttgcgattttggagccctatt 27869441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 36746796 - 36746749
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||| ||||||| |||||| ||| ||||||||||||||||    
T  36746796 cacttttcgcccc-tatgttttaaaatgttgcaattttggccccctatt 36746749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 4597403 - 4597463
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  4597403 taggataaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 4597463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 35102489 - 35102549
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctatt 35102549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 15298793 - 15298730
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  15298793 ttttaggttaaagtgcatttttcgccctctatgtttcaaaatgttgcgattttggccccttatt 15298730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 18791659 - 18791603
Alignment:
Q  145 taaagtgcacttttcg-ccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  18791659 taaagtgcacttttcgtccccctatgttttaaaatgttgcgattttggccccctatt 18791603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 4013966 - 4013911
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  4013966 taaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctatt 4013911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 14572186 - 14572236
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  14572186 tgcacttttcgccccctatgttttaaaatgttgcaattttggccccctatt 14572236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 24051006 - 24051067
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  24051006 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 24051067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 18749095 - 18749155
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||||| ||||||| |||||| ||| ||||||||||||||||    
T  18749095 taggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctatt 18749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 22968460 - 22968404
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||| |||||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  22968460 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc 22968404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 23819933 - 23819989
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||| |||||| ||||||||||||| || ||||||||||| |||||||||||||||    
T  23819933 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc 23819989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 26710601 - 26710553
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  26710601 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 26710553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 32682378 - 32682418
Alignment:
Q  147 aagtgcacttttcgccccctatgtttcaaaatgctgcgatt 187  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  32682378 aagtgcacttttcgccccctatgtttcaaaatgttgcgatt 32682418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 32452035 - 32451972
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||||| | |||||||||||||||||| ||| |||||| |||||||||    
T  32452035 ttttaggctaaactgcactttttgtcccctatgtttcaaaatgttgcaattttgaccccctatt 32451972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 6842389 - 6842327
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    ||||||| ||||||||||||||| ||| ||| ||||||||| | ||| |||||||||||||||    
T  6842389 ttttaggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctat 6842327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 8412754 - 8412816
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||||| |||||| |||||| || ||||||||||| |||||||||||| |||||||    
T  8412754 tttaggctaaagtccactttccgccccttaagtttcaaaatgttgcgattttggctccctatt 8412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 3118983 - 3118926
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||| |||| ||||||||||||||||||||||||| |||| |  ||||||||||||||    
T  3118983 taggctaaactgcacttttcgccccctatgtttcataatgttatgattttggccccct 3118926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 31211092 - 31211047
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttg 190  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||    
T  31211092 taaagtgcacttttggccccctatgtttcaaaatattgcgattttg 31211047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 4597699 - 4597651
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  4597699 cacttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 4597651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 18749422 - 18749374
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  18749422 cacttttcgccctctaagtttcaaaatgttgcgattttgaccccctatt 18749374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 28574612 - 28574564
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||||||    
T  28574612 tgcacttttggccccctatgtttcaagaagttgcgattttggcccccta 28574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 32451736 - 32451784
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  32451736 cacttttcgccctctaagtttcaaaatgttgtgattttggccccctatt 32451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 8415349 - 8415294
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||| | |||| ||||||||| || |||||||    
T  8415349 taaactgcacttttcgccccctatgttttataatgttgcgattttagctccctatt 8415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 25819985 - 25819930
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||| ||||||||||| |||||| | | ||||||||||||||||    
T  25819985 taaactgcacttttcgtcccctatgttttaaaatgttacaattttggccccctatt 25819930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 34834225 - 34834170
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||| || ||||||    
T  34834225 taaagtgcacttttcgccccttatgttttaaaatattgcgattttgacctcctatt 34834170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 27322170 - 27322113
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    |||| ||||||||||||||| |||||||| |||||||||  ||| ||||||||||||||    
T  27322170 taggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 27322113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 12291430 - 12291475
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggccccttatt 12291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 14572483 - 14572422
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||| |||||||||||| ||| |||| |||||  ||| ||||||||||||||||    
T  14572483 ttaggctaaagtccacttttcgccctctaagttttaaaatattgcaattttggccccctatt 14572422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 18791355 - 18791416
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| |||| |||||| |||||||||||||| |||||    
T  18791355 ttaggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccctctatt 18791416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 24603668 - 24603611
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||||| ||||||| |||||||||||| ||||||| |||||  | |||||||||||||    
T  24603668 tttaggctaaagtgtacttttcgccccatatgttttaaaatattacgattttggcccc 24603611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 34528442 - 34528393
Alignment:
Q  151 gcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||| |||||||| || |||||||| ||||||||||||| ||||||    
T  34528442 gcactttttgccccctaagtatcaaaatgttgcgattttggcctcctatt 34528393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 2018623 - 2018575
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||| |||||||||| | | ||||||||||||||||||    
T  2018623 tgcacttttggccccttatgtttcaagaagttgcgattttggcccccta 2018575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 11623167 - 11623215
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||| ||||||||||| | | ||||||||||||||||||    
T  11623167 tgcacttttggccctctatgtttcaagaagttgcgattttggcccccta 11623215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 12203900 - 12203948
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||| | | |||||||||| |||||||    
T  12203900 tgcacttttggccccctatgtttcaagaagttgcgattttgacccccta 12203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 15298500 - 15298544
Alignment:
Q  156 tttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  15298500 tttcgccctctaagtttcaaaatgttgcgagtttggccccctatt 15298544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 25819695 - 25819743
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| ||| ||||||||||||||||    
T  25819695 cacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 25819743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 31210804 - 31210852
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| ||||||||||||| ||||||    
T  31210804 cacttttcgccctctaagttttaaaatgttgcgattttggcctcctatt 31210852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 35102757 - 35102713
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  35102757 cacttttcgccctctaagtttcaaaatgttgcaattttggccccc 35102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 18695308 - 18695248
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18695308 taggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctatt 18695248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 40428642 - 40428697
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 40428697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 31055312 - 31055373
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  31055312 ttaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 31055373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 31648293 - 31648237
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcc 193  Q
    ||||||| |||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  31648293 ttttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggcc 31648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 16901000 - 16901055
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  16901000 taaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctatt 16901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 23765418 - 23765473
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  23765418 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23765473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 23815266 - 23815321
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  23815266 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 24025024 - 24025079
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||    
T  24025024 taaagtgcactattcgccccctaagtttcaaaatattgcgattttggccccctatt 24025079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 26639040 - 26639095
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| | |||||||    
T  26639040 taaagtgcacttttcgccccctatgtttcaaaatgttgtgattttgactccctatt 26639095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 8646050 - 8646002
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcc 193  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  8646050 taaagtgcacttttcgccccttatgttttaaaatgttgcgattttggcc 8646002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 245895 - 245840
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| | ||||||||    
T  245895 taaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtcccctatt 245840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 19169644 - 19169589
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| ||||||| |||||||||| || |||||||||| ||||||    
T  19169644 taaagtgcacttttcgtcccctatatttcaaaatgttgtgattttggcctcctatt 19169589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 20654103 - 20654040
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||||||| |||||| ||||||||||| || |||||||||| ||||||    
T  20654103 ttttaggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggcctcctatt 20654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 25557167 - 25557120
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  25557167 acttttcgccccctaagtttcaaaatgttgcgattttgaccccctatt 25557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 245589 - 245654
Alignment:
Q  135 tgttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||| | |||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  245589 tgttttaggttaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctatt 245654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 16307475 - 16307535
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||| |||||||||||| |||||| || |||||||| ||||||||    
T  16307475 taggttaaactgcacttttcaccccctatgttttaaaatgttgtgattttggtcccctatt 16307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 17704876 - 17704828
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  17704876 cacttttcgtcccctaagtttcaaaatattgcgattttggccccctatt 17704828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 38408639 - 38408687
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  38408639 cacttttcgtcccctaagtttcaaaatattgcgattttggccccctatt 38408687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 23765698 - 23765635
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | |||||||||||| ||| |||| |||||| ||| ||||||||||||||||    
T  23765698 ttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 23765635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 23815546 - 23815483
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | |||||||||||| ||| |||| |||||| ||| ||||||||||||||||    
T  23815546 ttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 23815483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 25556880 - 25556934
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||| ||||||| |||||||||||||| ||| ||||||||||||||||    
T  25556880 taaactgcacttatcgcccc-tatgtttcaaaatgttgcaattttggccccctatt 25556934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 2373453 - 2373391
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||| ||||||||||  |||||| ||||||||| | ||||||||||||| ||||||    
T  2373453 tttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatt 2373391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 36641439 - 36641405
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatg 179  Q
    |||| ||||||||||||||||||||||||||||||    
T  36641439 taaactgcacttttcgccccctatgtttcaaaatg 36641405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 8645807 - 8645855
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||  ||||||||||| |||||||||| |||||||||    
T  8645807 cacttttcgccctcttagtttcaaaatgttgcgattttgaccccctatt 8645855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 17441215 - 17441155
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    ||||||| | || ||||||||||  ||||| |||||||||| | |||||||||||||||||    
T  17441215 ttttaggcttaaatgcacttttcatcccctgtgtttcaaaaagttgcgattttggccccct 17441155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 18695014 - 18695062
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| |||| |||||| |||||||||| |||||||||    
T  18695014 cacttttcgccctctaagttttaaaatgttgcgattttgaccccctatt 18695062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 44147279 - 44147216
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  44147279 ttttaggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctatt 44147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 8802396 - 8802458
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||    
T  8802396 tttaggctaaagtgcacttttcgtcccgtatgttttaaaatgttgcgattttggccccctatt 8802458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 15257661 - 15257526
Alignment:
Q  14 tgtgagacaaagtagctatatcaagatatagcgttgtgtatctcaaagactaaatatgatttgaaccagctagagctctgagcg--------agctatac 105  Q
    ||||||||| |||||| |||||| ||||||| ||||||||||| | |||||||| ||| || ||||| |||| |||||||||||        ||||||||    
T  15257661 tgtgagacatagtagccatatcaggatatagtgttgtgtatcttagagactaaagatgcttcgaaccggctatagctctgagcgacacagacagctatac 15257562  T
Q  106 ctaagctatagctctgtaaatcgcagtaatgtttta 141  Q
    || |  ||||||| ||||||||| ||||||||||||    
T  15257561 cttatttatagctttgtaaatcggagtaatgtttta 15257526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 21929843 - 21929905
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||    
T  21929843 tttaggctaaagtgcatttttcgccccctatgtttcaaaacgttgcgattttggctccctatt 21929905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 4518866 - 4518927
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||    
T  4518866 ttaggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggccccctatt 4518927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 4807598 - 4807658
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  4807598 taggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctatt 4807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 5192282 - 5192330
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5192282 cacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 5192330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 19392873 - 19392812
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  19392873 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 19392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 12723555 - 12723507
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  12723555 cacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 12723507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 8802692 - 8802645
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  8802692 acttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 8802645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 33895682 - 33895619
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||| ||| ||||||| ||||||||    
T  33895682 ttttaggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctatt 33895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 34602022 - 34602069
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||    
T  34602022 tgcacttttcaccccctatgtttcaaaaagttgcgattttggccccct 34602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 21666569 - 21666519
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  21666569 tgcactttttgcccccttagtttcaaaatgttgcgattttggccccctatt 21666519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 32968453 - 32968510
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||| ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  32968453 ttaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 32968510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 19391386 - 19391445
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||||| |||||||||||||| ||| ||||||| ||||||||    
T  19391386 taggctaaactgcacttttcgcccc-tatgtttcaaaatgttgcaattttggtcccctatt 19391445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 21930095 - 21930047
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  21930095 cacttttcgccctctaagtttcaaaatgttgcgattttgaccccctatt 21930047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 23936287 - 23936335
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||||||    
T  23936287 tgcacttttggccccctatgtttcaagaagttgcgattttggcccccta 23936335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 30784558 - 30784510
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||| ||||    
T  30784558 cacttttcgccctctaagtttcaaaatgttgcgattttggccccttatt 30784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 44146982 - 44147030
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  44146982 cacttttcgccctccaagtttcaaaatgttgcgattttggccccctatt 44147030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 12723264 - 12723319
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||| ||||||||||||||||| | ||| |||||| |||||||||    
T  12723264 taaactgcacttttcaccccctatgtttcaaaacgttgcaattttgaccccctatt 12723319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 22452176 - 22452231
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||| ||| |||||| ||| ||||| ||||||||||    
T  22452176 taaactgcacttttcgccccctatattttaaaatgttgcaattttagccccctatt 22452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 23565132 - 23565179
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||||    
T  23565132 acttttcgccccttatgtttcaaaatgttgcaattttgaccccctatt 23565179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 23565382 - 23565335
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||| |||||| ||| |||||| |||||||||    
T  23565382 acttttcgccccctatgttttaaaatgttgcaattttgaccccctatt 23565335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 27453581 - 27453534
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||||    
T  27453581 tgcacttttcaccccctatgtttcaaaaagttgtgattttggccccct 27453534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 38974798 - 38974849
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  38974798 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 38974849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 38980142 - 38980091
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  38980142 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 38980091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 39005896 - 39005947
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  39005896 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 39005947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 39011239 - 39011188
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  39011239 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 39011188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 11456634 - 11456695
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    |||||| ||||||||||||||| |||||||  ||||||||   ||| |||||||||||||||    
T  11456634 tttaggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggccccctat 11456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 4519161 - 4519113
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| || ||| ||||||||||| |||||||||||| |||||||    
T  4519161 cacttttcgtcctctaagtttcaaaatgttgcgattttggctccctatt 4519113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 17648253 - 17648301
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| || ||||||||| |||||||    
T  17648253 cacttttcgccctctaagtttcaaaatgttgtgattttggctccctatt 17648301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 30784275 - 30784323
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||||| ||||||||||| ||| ||||||| ||||||||    
T  30784275 cactttttgccccctaggtttcaaaatgttgcaattttggtcccctatt 30784323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 8e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 13826418 - 13826478
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  13826418 taggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgaccccctatt 13826478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 43793629 - 43793689
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 43793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 4357552 - 4357497
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  4357552 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttgaccccctatt 4357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 13394539 - 13394594
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  13394539 taaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctatt 13394594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 13397678 - 13397733
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  13397678 taaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctatt 13397733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 15058823 - 15058873
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15058823 taaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcccc 15058873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 8913070 - 8913111
Alignment:
Q  100 ctatacctaagctatagctctgtaaatcgcagtaatgtttta 141  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8913070 ctatacctaagctatagctctgtaaatcgcagtaatgtttta 8913111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 4433181 - 4433241
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccttatt 4433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 5304350 - 5304405
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||| |||||    
T  5304350 taaagtgcacttttcgccccctatgtttcaaaatgttttgattttggccctctatt 5304405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 25012035 - 25011980
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  25012035 taaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 25011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 25011745 - 25011793
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  25011745 cacttttcgtcccctaagtttcaaaatgttgcgattttggccccctatt 25011793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 9195665 - 9195720
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||| ||||||||||||||| |||  ||||||||||||||| ||||    
T  9195665 taaagtgcactttttgccccctatgtttcataatattgcgattttggccccttatt 9195720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 41877333 - 41877270
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||| | |||||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  41877333 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctatt 41877270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 47869954 - 47869899
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||    
T  47869954 taaagtgcaatttttgccccctatatttcaaaatgttgtgattttggccccctatt 47869899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 3928956 - 3928902
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctat 199  Q
    ||||||||||||||| |||||||  |||||||| | |||||||||||||||||||    
T  3928956 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctat 3928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 19232340 - 19232401
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| ||||||||||||| |||||||||||||| | |||| ||| ||||||||| ||||||    
T  19232340 ttaggctaaagtgcactttccgccccctatgttttataatgttgcaattttggcctcctatt 19232401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 9195956 - 9195908
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||  |||||||||| ||||||||||| ||||||||    
T  9195956 cacttttcgccccctaaatttcaaaatgttgcgattttggtcccctatt 9195908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 18259405 - 18259357
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  18259405 cacttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 18259357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 27018516 - 27018460
Alignment:
Q  145 taaagtgcacttttcgccccc-tatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||| |||||||| |||||||||||||| |||||||||| |||||||||    
T  27018516 taaactgcacttctcgcccccctatgtttcaaaatgttgcgattttgaccccctatt 27018460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 43793924 - 43793876
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||||||||||    
T  43793924 cactttttgccgcctaagtttcaaaatgttgcgattttggccccctatt 43793876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 6788961 - 6789016
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| |||||||||    
T  6788961 taaagtgcacttttcacctcctatgttttaaaatattgcgattttgtccccctatt 6789016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 9397490 - 9397435
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||| ||||||| |||| |||||| || |||||||||||||||||    
T  9397490 taaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctatt 9397435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 20919333 - 20919384
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttgg 191  Q
    |||| |||| ||||||||||| |||||| ||||||||||| |||||||||||    
T  20919333 taggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttgg 20919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 2931628 - 2931586
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatg 179  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||    
T  2931628 ttttaggctaaactgcacttttcgccccctatgttttaaaatg 2931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 5304652 - 5304591
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||| | |||||||||||| ||| ||||||||||| |||||||||| ||| |||||    
T  5304652 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctatt 5304591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 6789252 - 6789207
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccct 197  Q
    ||||||||||||  || ||||||||||| |||||||||||||||||    
T  6789252 cacttttcgccctttaagtttcaaaatgttgcgattttggccccct 6789207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 4357262 - 4357310
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||| ||||||||| || |||||||    
T  4357262 cacttttcgccctctaagtttcaaaatgttgcgattttagctccctatt 4357310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 13397969 - 13397921
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||| ||| ||||||||||  ||| ||||||||||||||||    
T  13397969 cacttttcgccctctaagtttcaaaatattgcaattttggccccctatt 13397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 40489219 - 40489267
Alignment:
Q  150 tgcacttttcgccccctatgtttcaaaatgctgcgattttggcccccta 198  Q
    ||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  40489219 tgcacttttagccccctatctttctaaaagttgcgattttggcccccta 40489267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 45633435 - 45633491
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    ||||| |||| | |||||||||||||||| ||||||||||  |||||||||| ||||    
T  45633435 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc 45633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 6138 - 6076
Alignment:
Q  138 tttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  6138 tttaggctaaagtgtacttttcgccccctatgtttttaaatgttgcgattttggccccctatt 6076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 49965 - 49904
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  49965 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatt 49904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 62504 - 62443
Alignment:
Q  139 ttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  62504 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatt 62443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 49654 - 49717
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||| ||||||||||||| || |||| |||||| ||||||||||| ||||||||    
T  49654 ttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctatt 49717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 62193 - 62256
Alignment:
Q  137 ttttagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||| |||||| ||||||||||||| || |||| |||||| ||||||||||| ||||||||    
T  62193 ttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctatt 62256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 2051 - 2106
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  2051 taaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctatt 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 250521 - 250576
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  250521 taaagtgcacttttcgccccctatgttttaaaatgttgcgactttgaccccctatt 250576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 5648 - 5708
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||||||||||||||||||||||| | | ||||||||| ||||||    
T  5648 taggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctatt 5708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 5943 - 5895
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||| || ||| ||||||||||  ||||||||||||||||||||    
T  5943 cacttttcggcctctaagtttcaaaatattgcgattttggccccctatt 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 455329 - 455274
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||||||||||  ||||| ||||||||||| ||||||||||||||||||||    
T  455329 taaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggccccctatt 455274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 66474 - 66424
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggcccc 195  Q
    |||| |||||||||||||||||||||||||||||| ||  |||||||||||    
T  66474 taaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcccc 66424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 5133 - 5178
Alignment:
Q  155 ttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  5133 ttttcgccccctatgtttcaaaatgttgcaattttggtcccctatt 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 5300 - 5348
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    ||||| ||||||  |||||||||||||| ||| ||||||||||||||||    
T  5300 cacttctcgccctttatgtttcaaaatgttgcaattttggccccctatt 5348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 754 - 814
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||| |||| || ||||| ||||| ||||||||||||||||||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctatt 814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 2296 - 2236
Alignment:
Q  140 tagggtaaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| |||||||||||||||| |||||| |||||| ||| |||||||||| |||||    
T  2296 taggctaaactgcacttttcgccccccatgttttaaaatgttgcaattttggccctctatt 2236  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 61824 - 61872
Alignment:
Q  152 cacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||  ||| ||||||||||| ||||||||||||||||||||    
T  61824 cacttttcgccttctaagtttcaaaatgttgcgattttggccccctatt 61872  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 19296 - 19343
Alignment:
Q  153 acttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||| |||| ||||||||||| |||||||||| |||||||||    
T  19296 acttttcgcctcctaagtttcaaaatgttgcgattttgaccccctatt 19343  T

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Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 62119 - 62064
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| |||| ||||| ||||||||||||||||||| ||| ||||||||||| ||||    
T  62119 taaactgcatttttcaccccctatgtttcaaaatgttgcaattttggccccgtatt 62064  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 217 - 166
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccc 196  Q
    ||||||||||||||| |||||||  |||||||| | ||||||||||||||||    
T  217 taaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 166  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 43827 - 43882
Alignment:
Q  145 taaagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||| ||||||||||||| |||| ||||||||||| | | ||||||||||||||||    
T  43827 taaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggccccctatt 43882  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 24969 - 25022
Alignment:
Q  147 aagtgcacttttcgccccctatgtttcaaaatgctgcgattttggccccctatt 200  Q
    |||||||||||||||| | ||||||| |||||  ||||||||||| ||||||||    
T  24969 aagtgcacttttcgcctcatatgttttaaaatattgcgattttggtcccctatt 25022  T

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