View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9115_2D_low_18 (Length: 352)
Name: NF9115_2D_low_18
Description: NF9115_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9115_2D_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 37863669 - 37863362
Alignment:
| Q |
18 |
caaacatgtcgtcgaatccttctatcagttggaagttaaaaaagttcgaacgttgaacgttaaaggaaaaccgtccaagaatcgcagcttagtcgcaaaa |
117 |
Q |
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| T |
37863669 |
caaacatgtcgtcgaatccttctatcagttggaagttaaaaaagttcgaacgttgaacgttaaaggaaaaccgtccaagaatcgcagcttagtcgcaaaa |
37863570 |
T |
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| Q |
118 |
ccagattataagaaagcctatgtcaccctaaaaaatccggcttccttctccaacaacattttcgcctttcattccacagctaatgccgtcgacgacaata |
217 |
Q |
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| T |
37863569 |
ccagattataagaaagcctatgtcaccctaaaaaatccggcttccttctccaacaacattttcgcctttcattccacagctaatgccgtcgacgacaata |
37863470 |
T |
|
| Q |
218 |
acaaggatgagaagaaaatggtggcaaattaatgctaggtactactcctcttttggtacatgccattggtttcaattcaatattcttgtgtcatttaaat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37863469 |
acaaggatgagaagaaaatggtggcaaattaatgctaggtactactcctcttttggtacatgccattggtttcaattcaatattcttgtgtcatttaaat |
37863370 |
T |
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| Q |
318 |
gttcacta |
325 |
Q |
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|||||||| |
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| T |
37863369 |
gttcacta |
37863362 |
T |
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