View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9115_2D_low_8 (Length: 559)

Name: NF9115_2D_low_8
Description: NF9115_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9115_2D_low_8
NF9115_2D_low_8
[»] chr4 (42 HSPs)
chr4 (11-559)||(13228282-13228830)
chr4 (95-394)||(39974598-39974898)
chr4 (58-412)||(49953018-49953381)
chr4 (210-489)||(50814455-50814733)
chr4 (54-414)||(281670-282017)
chr4 (401-488)||(39974409-39974496)
chr4 (52-489)||(42729463-42729894)
chr4 (411-490)||(49953481-49953560)
chr4 (409-486)||(281499-281576)
chr4 (59-163)||(6560961-6561065)
chr4 (85-181)||(28475656-28475752)
chr4 (69-148)||(24183432-24183510)
chr4 (52-141)||(6554542-6554631)
chr4 (9-183)||(42757527-42757699)
chr4 (56-191)||(27741355-27741493)
chr4 (59-158)||(13230887-13230986)
chr4 (66-160)||(55050025-55050117)
chr4 (59-137)||(316508-316586)
chr4 (60-372)||(11559284-11559598)
chr4 (69-191)||(50158147-50158268)
chr4 (444-484)||(312133-312173)
chr4 (62-137)||(36697769-36697844)
chr4 (451-489)||(4281220-4281258)
chr4 (448-494)||(42757967-42758013)
chr4 (52-160)||(17675276-17675384)
chr4 (417-493)||(24183774-24183850)
chr4 (66-189)||(26289997-26290118)
chr4 (75-142)||(4237127-4237194)
chr4 (59-162)||(11560197-11560299)
chr4 (46-105)||(14265631-14265690)
chr4 (130-181)||(35308158-35308209)
chr4 (49-99)||(284322-284372)
chr4 (59-137)||(13918248-13918326)
chr4 (49-99)||(39977241-39977291)
chr4 (52-166)||(42727913-42728027)
chr4 (60-101)||(312872-312913)
chr4 (28-124)||(14266234-14266331)
chr4 (67-156)||(42756826-42756915)
chr4 (52-142)||(48683180-48683272)
chr4 (444-488)||(11559180-11559224)
chr4 (46-138)||(13910148-13910240)
chr4 (445-489)||(35307857-35307901)
[»] chr2 (39 HSPs)
chr2 (11-489)||(3395400-3395878)
chr2 (11-486)||(5788821-5789298)
chr2 (212-488)||(41754523-41754800)
chr2 (46-183)||(19040663-19040799)
chr2 (216-489)||(34722879-34723156)
chr2 (46-183)||(39839072-39839208)
chr2 (52-158)||(29977350-29977456)
chr2 (11-147)||(36720068-36720205)
chr2 (52-136)||(36727623-36727707)
chr2 (20-98)||(41754117-41754196)
chr2 (259-488)||(30638096-30638321)
chr2 (51-160)||(34425580-34425689)
chr2 (60-160)||(29651760-29651860)
chr2 (277-392)||(36729484-36729598)
chr2 (418-489)||(39406292-39406363)
chr2 (60-161)||(45659828-45659927)
chr2 (447-488)||(29978124-29978165)
chr2 (33-137)||(38796797-38796902)
chr2 (67-150)||(36729280-36729363)
chr2 (59-137)||(20106660-20106738)
chr2 (111-181)||(40599682-40599752)
chr2 (245-342)||(45658290-45658385)
chr2 (52-182)||(6466121-6466243)
chr2 (62-161)||(14873420-14873517)
chr2 (26-105)||(29975884-29975964)
chr2 (449-489)||(36729645-36729685)
chr2 (69-148)||(14868824-14868902)
chr2 (50-121)||(19994416-19994486)
chr2 (126-213)||(19994503-19994590)
chr2 (51-106)||(24967988-24968043)
chr2 (315-392)||(2593201-2593281)
chr2 (59-137)||(31963699-31963777)
chr2 (59-140)||(39403435-39403514)
chr2 (400-433)||(10999561-10999594)
chr2 (52-161)||(13439345-13439454)
chr2 (60-101)||(20443608-20443649)
chr2 (60-133)||(25546954-25547027)
chr2 (60-101)||(31967332-31967373)
chr2 (51-91)||(41753997-41754037)
[»] chr1 (27 HSPs)
chr1 (11-489)||(43387047-43387525)
chr1 (46-187)||(20306717-20306857)
chr1 (54-191)||(22636310-22636447)
chr1 (46-183)||(40946485-40946621)
chr1 (46-183)||(30001726-30001862)
chr1 (46-150)||(1992421-1992524)
chr1 (46-136)||(26531550-26531638)
chr1 (271-472)||(22636505-22636704)
chr1 (66-189)||(17006492-17006613)
chr1 (66-189)||(34159478-34159599)
chr1 (46-160)||(47783135-47783249)
chr1 (281-491)||(31090530-31090738)
chr1 (60-166)||(31089541-31089647)
chr1 (51-160)||(7844607-7844716)
chr1 (84-181)||(8313411-8313508)
chr1 (87-148)||(16851963-16852024)
chr1 (50-99)||(43385108-43385157)
chr1 (28-161)||(16853598-16853730)
chr1 (51-106)||(19065742-19065797)
chr1 (51-106)||(19113632-19113687)
chr1 (55-106)||(21469816-21469867)
chr1 (446-489)||(40946249-40946292)
chr1 (111-181)||(3838181-3838251)
chr1 (413-486)||(3838424-3838497)
chr1 (60-106)||(31088786-31088834)
chr1 (60-101)||(49880330-49880371)
chr1 (238-346)||(31420732-31420839)
[»] scaffold0159 (1 HSPs)
scaffold0159 (11-486)||(33194-33671)
[»] chr8 (50 HSPs)
chr8 (20-488)||(42797242-42797711)
chr8 (20-489)||(23141752-23142224)
chr8 (20-488)||(13756203-13756666)
chr8 (54-394)||(21588824-21589166)
chr8 (281-489)||(10901547-10901754)
chr8 (11-160)||(10901390-10901540)
chr8 (401-489)||(21589269-21589357)
chr8 (400-492)||(40114449-40114541)
chr8 (400-488)||(41529035-41529123)
chr8 (238-376)||(24481718-24481857)
chr8 (282-434)||(757816-757964)
chr8 (11-160)||(30254510-30254663)
chr8 (66-189)||(16313248-16313369)
chr8 (66-189)||(34800782-34800903)
chr8 (7-164)||(13758877-13759030)
chr8 (59-137)||(17888052-17888130)
chr8 (261-366)||(45527083-45527186)
chr8 (400-489)||(16221892-16221981)
chr8 (51-160)||(40885744-40885853)
chr8 (66-189)||(37251164-37251285)
chr8 (51-106)||(357546-357601)
chr8 (425-488)||(18432505-18432568)
chr8 (51-106)||(23683161-23683216)
chr8 (111-213)||(18431674-18431776)
chr8 (11-77)||(38292408-38292474)
chr8 (46-103)||(12158035-12158092)
chr8 (52-141)||(41527026-41527115)
chr8 (51-160)||(45247768-45247877)
chr8 (60-160)||(14376134-14376234)
chr8 (51-94)||(13758078-13758121)
chr8 (73-136)||(18953362-18953425)
chr8 (7-142)||(43215796-43215930)
chr8 (59-137)||(8358803-8358881)
chr8 (49-99)||(21586487-21586537)
chr8 (385-474)||(14373561-14373650)
chr8 (87-148)||(15277766-15277827)
chr8 (87-148)||(15458135-15458196)
chr8 (59-160)||(32916820-32916921)
chr8 (60-101)||(36754531-36754572)
chr8 (60-101)||(41528504-41528545)
chr8 (28-103)||(43216924-43216998)
chr8 (109-165)||(8357693-8357749)
chr8 (50-82)||(10280443-10280475)
chr8 (59-163)||(15342301-15342405)
chr8 (59-163)||(15431366-15431470)
chr8 (59-163)||(15522670-15522774)
chr8 (401-489)||(15630188-15630276)
chr8 (415-491)||(24044210-24044286)
chr8 (65-165)||(38291748-38291848)
chr8 (27-102)||(45528233-45528309)
[»] chr5 (24 HSPs)
chr5 (9-313)||(38015878-38016182)
chr5 (195-414)||(33014007-33014227)
chr5 (256-463)||(42312245-42312452)
chr5 (409-488)||(33014320-33014399)
chr5 (46-161)||(9012698-9012813)
chr5 (300-437)||(42313347-42313482)
chr5 (45-189)||(8128411-8128553)
chr5 (52-141)||(9024953-9025042)
chr5 (46-163)||(20966097-20966214)
chr5 (66-160)||(4062139-4062231)
chr5 (52-213)||(19910595-19910759)
chr5 (95-160)||(11770399-11770464)
chr5 (400-489)||(32259413-32259502)
chr5 (367-488)||(38016182-38016303)
chr5 (111-163)||(9048607-9048658)
chr5 (444-488)||(9022785-9022829)
chr5 (351-491)||(42955306-42955443)
chr5 (66-160)||(7332935-7333027)
chr5 (277-433)||(10175613-10175771)
chr5 (54-160)||(19318902-19319006)
chr5 (52-137)||(29865859-29865942)
chr5 (447-488)||(7333206-7333247)
chr5 (51-160)||(27594557-27594666)
chr5 (100-157)||(33013940-33013997)
[»] chr6 (35 HSPs)
chr6 (27-288)||(1599542-1599805)
chr6 (91-303)||(26894748-26894961)
chr6 (283-488)||(1594479-1594684)
chr6 (364-485)||(26894607-26894728)
chr6 (46-183)||(7428469-7428605)
chr6 (56-183)||(16279074-16279200)
chr6 (52-135)||(31737205-31737288)
chr6 (66-160)||(23410088-23410180)
chr6 (7-164)||(11554334-11554492)
chr6 (245-436)||(20873525-20873715)
chr6 (245-432)||(24174699-24174883)
chr6 (66-189)||(20872435-20872556)
chr6 (51-106)||(21984208-21984263)
chr6 (60-183)||(28365691-28365813)
chr6 (59-160)||(4031519-4031618)
chr6 (7-164)||(4852786-4852944)
chr6 (59-137)||(15878847-15878925)
chr6 (408-473)||(4029627-4029692)
chr6 (46-163)||(19660312-19660429)
chr6 (351-454)||(2976423-2976526)
chr6 (16-147)||(24175010-24175141)
chr6 (52-191)||(29214273-29214412)
chr6 (51-106)||(33350291-33350346)
chr6 (245-498)||(34516738-34516987)
chr6 (60-106)||(4791625-4791671)
chr6 (45-103)||(9452849-9452907)
chr6 (111-149)||(20874193-20874231)
chr6 (27-92)||(24397965-24398031)
chr6 (409-490)||(26597899-26597980)
chr6 (53-141)||(9449601-9449689)
chr6 (400-488)||(14211616-14211704)
chr6 (16-143)||(15600249-15600377)
chr6 (67-139)||(16707317-16707389)
chr6 (46-150)||(26597582-26597684)
chr6 (446-490)||(28365450-28365494)
[»] chr3 (44 HSPs)
chr3 (199-488)||(50332063-50332353)
chr3 (95-394)||(36095859-36096164)
chr3 (20-160)||(50331915-50332056)
chr3 (169-394)||(12746101-12746326)
chr3 (46-150)||(20934981-20935084)
chr3 (46-187)||(32976455-32976595)
chr3 (401-489)||(12746425-12746513)
chr3 (46-150)||(42400367-42400470)
chr3 (71-149)||(431968-432046)
chr3 (46-150)||(17764120-17764223)
chr3 (46-150)||(19065440-19065543)
chr3 (411-489)||(10976771-10976849)
chr3 (402-488)||(17763830-17763916)
chr3 (402-488)||(19065150-19065236)
chr3 (400-486)||(50239313-50239399)
chr3 (444-489)||(6088375-6088420)
chr3 (51-160)||(40056505-40056614)
chr3 (51-163)||(14044266-14044378)
chr3 (66-189)||(19817404-19817525)
chr3 (52-160)||(32970448-32970556)
chr3 (242-367)||(6088027-6088149)
chr3 (59-137)||(20779566-20779644)
chr3 (34-141)||(34849788-34849896)
chr3 (52-163)||(25225317-25225428)
chr3 (51-106)||(30171172-30171227)
chr3 (59-142)||(37837526-37837609)
chr3 (29-90)||(10020165-10020227)
chr3 (349-489)||(12125841-12125979)
chr3 (100-148)||(6435915-6435963)
chr3 (62-161)||(9263468-9263565)
chr3 (28-161)||(14249239-14249371)
chr3 (51-106)||(20788479-20788534)
chr3 (130-213)||(21320393-21320476)
chr3 (60-161)||(6437545-6437644)
chr3 (111-161)||(11655434-11655484)
chr3 (52-94)||(40417868-40417910)
chr3 (87-148)||(9261465-9261526)
chr3 (78-147)||(12125579-12125648)
chr3 (52-120)||(6087837-6087905)
chr3 (417-489)||(6435578-6435650)
chr3 (59-99)||(12744020-12744060)
chr3 (63-131)||(21868040-21868108)
chr3 (60-160)||(37836713-37836813)
chr3 (51-103)||(39183101-39183153)
[»] scaffold0036 (2 HSPs)
scaffold0036 (9-266)||(50164-50422)
scaffold0036 (304-429)||(50440-50558)
[»] scaffold0380 (3 HSPs)
scaffold0380 (195-342)||(14332-14480)
scaffold0380 (7-121)||(14532-14647)
scaffold0380 (414-486)||(14235-14307)
[»] chr7 (21 HSPs)
chr7 (283-488)||(15721438-15721643)
chr7 (46-150)||(43989681-43989784)
chr7 (78-213)||(17510234-17510369)
chr7 (78-213)||(17542845-17542980)
chr7 (62-160)||(45406686-45406784)
chr7 (78-191)||(17474750-17474863)
chr7 (78-191)||(17578351-17578464)
chr7 (85-181)||(38788964-38789060)
chr7 (291-491)||(6679453-6679652)
chr7 (64-201)||(4120006-4120143)
chr7 (413-488)||(29502481-29502556)
chr7 (71-149)||(42080874-42080952)
chr7 (66-189)||(29912542-29912663)
chr7 (67-160)||(20181327-20181420)
chr7 (46-134)||(22528920-22529008)
chr7 (444-490)||(17475013-17475059)
chr7 (444-490)||(17578155-17578201)
chr7 (59-131)||(2929446-2929518)
chr7 (408-488)||(4120340-4120420)
chr7 (47-87)||(13301133-13301173)
chr7 (407-487)||(42080566-42080646)
[»] scaffold0169 (2 HSPs)
scaffold0169 (282-460)||(1988-2162)
scaffold0169 (54-149)||(2278-2376)
[»] scaffold0216 (1 HSPs)
scaffold0216 (60-162)||(29168-29270)
[»] scaffold1750 (2 HSPs)
scaffold1750 (46-150)||(268-371)
scaffold1750 (315-349)||(542-576)
[»] scaffold1345 (1 HSPs)
scaffold1345 (54-150)||(1847-1942)
[»] scaffold0114 (2 HSPs)
scaffold0114 (400-491)||(34470-34561)
scaffold0114 (52-141)||(37041-37130)
[»] scaffold0155 (1 HSPs)
scaffold0155 (245-423)||(22749-22929)
[»] scaffold0284 (4 HSPs)
scaffold0284 (59-163)||(6424-6528)
scaffold0284 (400-488)||(2998-3086)
scaffold0284 (59-137)||(7590-7668)
scaffold0284 (60-101)||(2331-2372)
[»] scaffold0012 (2 HSPs)
scaffold0012 (66-197)||(31023-31152)
scaffold0012 (244-352)||(96868-96974)
[»] scaffold0191 (1 HSPs)
scaffold0191 (69-160)||(5143-5233)
[»] scaffold0074 (2 HSPs)
scaffold0074 (27-166)||(30815-30954)
scaffold0074 (52-105)||(32745-32798)
[»] scaffold0053 (2 HSPs)
scaffold0053 (71-183)||(30999-31107)
scaffold0053 (442-490)||(30662-30710)
[»] scaffold0050 (2 HSPs)
scaffold0050 (11-166)||(11559-11710)
scaffold0050 (444-489)||(11962-12007)
[»] scaffold0268 (1 HSPs)
scaffold0268 (66-197)||(19862-19991)
[»] scaffold0119 (1 HSPs)
scaffold0119 (66-160)||(40575-40667)
[»] scaffold0051 (1 HSPs)
scaffold0051 (27-141)||(12572-12687)
[»] scaffold0021 (1 HSPs)
scaffold0021 (411-482)||(129359-129430)
[»] scaffold0024 (1 HSPs)
scaffold0024 (27-191)||(47123-47288)
[»] scaffold1315 (1 HSPs)
scaffold1315 (9-149)||(510-652)
[»] scaffold1293 (1 HSPs)
scaffold1293 (9-149)||(1419-1561)
[»] scaffold0131 (1 HSPs)
scaffold0131 (409-476)||(17329-17396)
[»] scaffold1737 (1 HSPs)
scaffold1737 (111-149)||(524-562)
[»] scaffold1590 (1 HSPs)
scaffold1590 (409-486)||(1450-1525)
[»] scaffold0211 (1 HSPs)
scaffold0211 (52-141)||(18449-18538)
[»] scaffold0377 (1 HSPs)
scaffold0377 (407-487)||(15400-15480)
[»] scaffold0022 (1 HSPs)
scaffold0022 (315-355)||(126294-126334)


Alignment Details
Target: chr4 (Bit Score: 485; Significance: 0; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 11 - 559
Target Start/End: Complemental strand, 13228830 - 13228282
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttat 110  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13228830 agattgacatcacaacttcacccaaaattttaagaattagatatatgagtcatctcacttatatgtttctcaacatctactattgcattcaatgtgttat 13228731  T
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgtt 210  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13228730 tttaactcacacttgacacattaacatctctccattaagtatgagactttttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgtt 13228631  T
Q  211 gaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgtta 310  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  13228630 gaagcggatatgatatcaccattgaaacttatggggagccaacacttgtgtgaatcaacgcattgcagaaagagcaatcacacaagtgaaaatgatgtta 13228531  T
Q  311 cattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgac 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13228530 cattttcattcaaaattttaagacttaaggatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgac 13228431  T
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagttattactaatccaaaaaggtaa 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  13228430 acttgatacatcacaatattctctccattgaaaatgacgaaattctagcccgtgcttggcacgggtgtccatactagttattactaatccaacaaggtaa 13228331  T
Q  511 tcttatcatgcattttttccgcacacacttcttaatatataaacattat 559  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||    
T  13228330 tcctatcatgcattttttccgcacacacttcttaatatataaacattat 13228282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 95 - 394
Target Start/End: Complemental strand, 39974898 - 39974598
Alignment:
Q  95 gcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttat 194  Q
    |||| |||| |||||||||||| |||| || |||||||| |||||||| ||||| || || |||||||||||| ||||||||||||||  || |||||      
T  39974898 gcattcaatatgttattttaacccacacttgacacattaccatctctcaattaaatacgatactctttgtgtccgcgatccaccaccacgaagcacttcc 39974799  T
Q  195 gctccccaaaaatgttgaagcggatatgatatcaccattggaactta-tggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacac 293  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||| ||||| ||||||||||| | ||| |||||    
T  39974798 actccccaaaaatgttgaagcgtatatgatatcaccattggaacttacgggggagacaacacttgtgtgattcgacacattgcagaaaaaacaaccacac 39974699  T
Q  294 aagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaat 393  Q
    | |||||||||||||  ||| ||| | |||||||||||| ||| |||||  | ||| |||| |||||||||||||||| ||||||||||| |||||||||    
T  39974698 aggtgagaatgatgtcgcatcttcttccaaaattttaaggctttagtatgagtttttttttccacttatttgttcttcgacctccaatattttatccaat 39974599  T
Q  394 g 394  Q
    |    
T  39974598 g 39974598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 58 - 412
Target Start/End: Original strand, 49953018 - 49953381
Alignment:
Q  58 agtcatctcacttatatgtttctcaacatctactat-tgc-atccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgag 155  Q
    ||||||||||||||||| ||  |||| ||||| ||| ||| || ||||||||||||||||  |||| || ||||||||||||||||| ||||| ||||||    
T  49953018 agtcatctcacttatatattgttcaatatctattatatgccattcaatgtgttattttaatccacacttgacacattaacatctctcaattaaatatgag 49953117  T
Q  156 actctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcggatatgatatcaccattggaactta-tggggagccaaca 254  Q
    |||||| ||||| | ||||||||||||  || |||||  |||||||||||||||||||||| ||||||||||||| |||| |||||  |||||| |||||    
T  49953118 actcttcgtgtccgtgatccaccaccacgaagcacttccgctccccaaaaatgttgaagcgtatatgatatcaccgttgggacttacgggggagacaaca 49953217  T
Q  255 cttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatga------tt 348  Q
    ||||||||| ||||  ||||||||||| | ||| ||||||||||||||||||||  | | ||||| |||||||||||| ||| |||||||||      ||    
T  49953218 cttgtgtgattcgaaacattgcagaaaaaacaaccacacaagtgagaatgatgtcgcgtcttcatccaaaattttaaggctttagtatatgagttttttt 49953317  T
Q  349 tatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacac 412  Q
    | | ||||||||||||||||||| ||||| ||||| |||||||||| ||| |||||| ||||||    
T  49953318 tttctttcacttatttgttcttcgacctctaatattttatccaatgatgagatttaaatgacac 49953381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 210 - 489
Target Start/End: Complemental strand, 50814733 - 50814455
Alignment:
Q  210 tgaagcggatatgatatcaccattggaacttatgggg-agccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgt 308  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||    
T  50814733 tgaagcagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgt 50814634  T
Q  309 tacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtg 408  Q
    ||||| ||||| |||||||| ||| ||||||||| || |||| |||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||       
T  50814633 tacatcttcatccaaaatttaaagtcttaagtatgtg-ttta-ttttcacttatttactcttcaacctccaatattttatccaatattgagatttaacat 50814536  T
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||| || |||| | |||| ||||||||| || |  |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  50814535 acatttaatactttacaacattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagtt 50814455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 54 - 414
Target Start/End: Complemental strand, 282017 - 281670
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactatt--gcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||||||||||||| |||||||  |||| || || |||   | || ||||||||||||||||| |||| || ||||||||||||||||| ||||| ||    
T  282017 tatgagtcatctcactaatatgttgttcaatatatattatatggaattcaatgtgttattttaacccacacttgacacattaacatctctcaattaaata 281918  T
Q  152 tgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcggatatgatatcaccattggaactta-tggggagcc 250  Q
     ||||||||| ||||| |||||||||||||| | | |||||  ||||| |||||||||||||||| |||||||||||||||||| |||||  |||||| |    
T  281917 cgagactcttcgtgtccgcgatccaccaccacacagcacttccgctccacaaaaatgttgaagcgtatatgatatcaccattgggacttacgggggagac 281818  T
Q  251 aacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgattta 350  Q
    ||||                ||||||||||| | ||| ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||| ||     
T  281817 aaca----------------cattgcagaaaaaacaaccacacaagtgagaatgatgtcgcatcttcatccaaaattttaaggctttagtatatgagttt 281734  T
Q  351 tttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacactt 414  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||| ||| |||||| ||||||||    
T  281733 tttttcacttatttgttcttcgacctccagtattttatccaatgatgagatttaaatgacactt 281670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 488
Target Start/End: Complemental strand, 39974496 - 39974409
Alignment:
Q  401 tttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    ||||| |||||||||||||||||||||||||||||||||  | ||| |||||||||| |||||| ||||||||||||| || ||||||    
T  39974496 tttaattgacacttgatacatcacaatattctctccattagatatgccgaaattctagcccgtgcttggcacgggtgttcaaactagt 39974409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 489
Target Start/End: Original strand, 42729463 - 42729894
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || |||   ||||||||||||  || |||| ||||||    |||||||||      
T  42729463 tatatgagtcatctcacttatatgtttctcaacatgtactattgcatacattgttgaattttaactcac--ttgacacgttaaca--attccattaagcg 42729558  T
Q  152 tgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcg-gatatgatatcaccattggaacttat-ggggagc 249  Q
    | | |||||  ||||| | ||| ||||||||| |||||||   | | ||| | |||||||||  | | ||||||| |||| ||||  ||| | |||||||    
T  42729559 tcaaactctcggtgtccgtgattcaccaccaagaaccactcccgttaccccacaatgttgaactgagttatgataccaccgttgggccttttgggggagc 42729658  T
Q  250 caacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgattt 349  Q
    |||||    |||| |||||| ||||| ||||||| |  ||| ||| || ||||| || | |||| ||||| ||  |||||||||||||||||||| |       
T  42729659 caacaacgatgtggatcgacacattggagaaagatcggtcatacatgtaagaattatatcacatcttcatccagcattttaagacttaagtatataa--- 42729755  T
Q  350 atttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacg 449  Q
    ||||||| ||| |||||| |||||||| || | |  ||| || || ||  |||||| | |||||||||| |||| |||||||||||| |  |  || |||    
T  42729756 atttttctcttgtttgttgttcaacctacacttttatattcagtg-tgggatttaactcacacttgataaatcataatattctctccctcaagtataacg 42729854  T
Q  450 aaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||  |||||||  ||||||||||||||||||||||||    
T  42729855 aaatttcaacccgttcttggcacgggtgtccatactagtt 42729894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 49953481 - 49953560
Alignment:
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    |||||||||||||||||||||| |||||| || |||||||||||||||||| || || ||||||||||||| ||||||||    
T  49953481 acttgatacatcacaatattctttccattaaatatgacgaaattctaacccatgcttagcacgggtgtccaaactagtta 49953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 486
Target Start/End: Complemental strand, 281576 - 281499
Alignment:
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||| |||||| ||| |||||||||||| ||||    
T  281576 acacttgatacatcacaatatcctctccattaaatatgacgaaattctagcccgtgcttgacacgggtgtccaaacta 281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 6561065 - 6560961
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||||||||||||  | |||||||||| ||| ||||||| ||  | |||||||||||||| | |||||| ||||||||| |||| | |||||||    
T  6561065 gtcatctcacttatatgttgtttaacatctacttttgtatccaatatggaactttaactcacatttgatacattagcatctctcccttaactgtgagact 6560966  T
Q  159 ctttg 163  Q
    |||||    
T  6560965 ctttg 6560961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 28475656 - 28475752
Alignment:
Q  85 atctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    ||||||| |||||| |||||||  ||||||||| ||| |||||||||||||||||||||||||||| | |||||||  ||||  | |||||||||||    
T  28475656 atctactcttgcatacaatgtgaaattttaacttacacttaacacattaacatctctccattaagtgtcagactctccgtgttcgtgatccaccacc 28475752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 24183432 - 24183510
Alignment:
Q  69 ttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||||||| |||| |||||||| |||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||    
T  24183432 ttatatgttgctca-catctactcttgcatacaatgtgaaattttaacttacacttaacacattaacatctctccattaa 24183510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 6554631 - 6554542
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||||||||||||||||||||||  |||| ||||||| || |||||| | |   ||||||||||||| || ||||||||||||||||    
T  6554631 tatatgagtcatctcacttatatgttattcaaaatctactcttccatccactatagaattttaactcacacttgacacattaacatctct 6554542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 42757527 - 42757699
Alignment:
Q  9 tgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcat--ccaatgt 105  Q
    |||||| ||||||||  ||||||||||| || ||||| ||||  ||||||| | ||||| || |||||||| |||||||||||| ||||||  |||||||    
T  42757527 tgagatcgacatcaccttttcacccaaagtcctaagacattaggtatatga-taatctccctcatatgtttttcaacatctactcttgcatatccaatgt 42757625  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
       | ||| ||||||| || ||||||||||||||||| |||||    ||||||||  ||||||| |||||||||||||    
T  42757626 taaacttttactcacaattgacacattaacatctctctattaa----gagactctccgtgtctgtgatccaccaccaa 42757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 27741355 - 27741493
Alignment:
Q  56 tgagtcatctcacttatatgtttctcaacatc---tactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtat 152  Q
    |||||||||||||| ||||||| |||||||||   |||| ||| |||||||||   ||||||||| |||||||| | ||||| || |||||||||| | |    
T  27741355 tgagtcatctcactcatatgttgctcaacatctattactcttgtatccaatgtagaattttaacttacatttaaaatattaatatatctccattaaatgt 27741454  T
Q  153 gagactctttgtgtctgcgatccaccaccaaaaaccact 191  Q
    ||||||||| |||| ||  ||||| || ||| |||||||    
T  27741455 gagactcttcgtgtgtgtaatccaacatcaagaaccact 27741493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 13230986 - 13230887
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    ||||||||| |||||||| |||||||||||||||||| |||  |||||  ||||||| ||||| ||||||  ||||||| ||| | |||||| |||||||    
T  13230986 gtcatctcatttatatgtgtctcaacatctactattgtatcttatgtgaaattttaaatcacaattaacattttaacatatcttccttaagtgtgagact 13230887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 55050117 - 55050025
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| ||||||||    
T  55050117 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactct 55050025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 316586 - 316508
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||| ||||||||||| ||||| ||||||| || |||| ||||| | |||||||||| ||||| ||||||||||||    
T  316586 gtcatctgacttatatgttgctcaaaatctactctttcatctaatgtataattttaactcgcatttgacacattaacat 316508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 372
Target Start/End: Complemental strand, 11559598 - 11559284
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||| ||||||||||||  ||||||| |||| |||||| |||| |   ||||||| ||||| || ||| |||||||||||| || ||||| | ||||||    
T  11559598 tcatcacacttatatgttgttcaacatttactcttgcatacaatatcaaattttaagtcacactttacatattaacatctcttcaataagtgtcagactc 11559499  T
Q  160 tttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcg-gatatgatatcaccattggaacttatg-gggagccaacactt 257  Q
    | | ||| || ||||| ||| |||||||||||   |||||||   |||||||| ||| ||||| ||||||| |||||   ||  | | ||||||  |||     
T  11559498 tctatgtttgtgatcctccaacaaaaaccactcccgctcccctgcaatgttgatgcgagatatcatatcacaattgggctttcggagagagcca--acta 11559401  T
Q  258 gtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttat--tttt 355  Q
     |||| ||  || ||||  ||||||||||| ||||||||||| |||| |   |||| ||||| |||||||||||| |||||||||| | ||| |  ||||    
T  11559400 ttgtggattaacacatttgagaaagagcaaccacacaagtgaaaatgctacaacatcttcatccaaaattttaaggcttaagtataagtttttttctttt 11559301  T
Q  356 cacttatttgttcttca 372  Q
    |||||||||||| ||||    
T  11559300 cacttatttgttgttca 11559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 50158268 - 50158147
Alignment:
Q  69 ttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtct 168  Q
    ||||||||| |||||||| |||| ||||||  ||||||  | ||||||||| | || ||||||||||||||||||||||||| | | ||||| |||| |     
T  50158268 ttatatgttgctcaacatatactcttgcataaaatgtgaaactttaactcatacttgacacattaacatctctccattaagtgtcaaactctctgtg-cc 50158170  T
Q  169 gcgatccaccaccaaaaaccact 191  Q
    | |||| |||||||| |||||||    
T  50158169 gtgatcgaccaccaagaaccact 50158147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 484
Target Start/End: Complemental strand, 312173 - 312133
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatac 484  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  312173 atgacgaaattctaacccgtgcttggcacgggtgtccatac 312133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 36697844 - 36697769
Alignment:
Q  62 atctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    |||| |||||||||||  | |||||||||| ||||||||||||||  | |||||||||||||| | ||||||||||    
T  36697844 atctaacttatatgttgtttaacatctacttttgcatccaatgtggaactttaactcacatttgatacattaacat 36697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 489
Target Start/End: Original strand, 4281220 - 4281258
Alignment:
Q  451 aattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  4281220 aattctaacccgtgcttggcacgggtgtccatactagtt 4281258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 494
Target Start/End: Original strand, 42757967 - 42758013
Alignment:
Q  448 cgaaattctaacccgtgtttggcacgggtgtccatactagttattac 494  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||    
T  42757967 cgaaattctagcccgtgcttggcacgggtgtccatactagttgttac 42758013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 17675276 - 17675384
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||| || || |||||||||||||  |||||||||| || |||||||||||||  | ||||| ||||| || |||| ||||| ||| ||  | |||||    
T  17675276 tatatgggttatatcacttatatgttgttcaacatctattaatgcatccaatgtggaactttaaatcacacttgacacgttaacttctttctctcaagta 17675375  T
Q  152 tgagactct 160  Q
    |||||||||    
T  17675376 tgagactct 17675384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 24183774 - 24183850
Alignment:
Q  417 tacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagttatta 493  Q
    |||||||||||||| ||||| || |   ||| | ||||||| |||||| ||||||||||||||||| ||||||||||    
T  24183774 tacatcacaatattatctcctttaagtttgatggaattctagcccgtgcttggcacgggtgtccatgctagttatta 24183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 26289997 - 26290118
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || ||| |||||||  | |||||||| || || ||||||||| || ||||| | ||||| |||||||| ||      
T  26289997 cacttatatgttactcaacatctactcttacatacaatgtg--actttaactcgcacttgacacattaatatttctccctaaagtaggagactctctgca 26290094  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  26290095 tatgagatctaccaccataaacca 26290118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 4237127 - 4237194
Alignment:
Q  75 gtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctc 142  Q
    ||||||||||||| ||| |||||| |||||||  ||||||||| |||  || ||||||||||||||||    
T  4237127 gtttctcaacatccactcttgcattcaatgtggaattttaacttacacgtagcacattaacatctctc 4237194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 11560299 - 11560197
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||| ||||| ||  |||| || |||| ||||||||||||| | | ||||||||||   | |||||||||||||||||| |||||| || ||||    
T  11560299 gtcatctcacgtatatattg-tcaatatatactcttgcatccaatgtataagtttaactcacccatgacacattaacatctctcccttaagtgtgggact 11560201  T
Q  159 cttt 162  Q
    ||||    
T  11560200 cttt 11560197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 14265631 - 14265690
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    |||| |||||||||| || || ||||||| ||||||| ||||||| ||||||||||||||    
T  14265631 attagatatatgagttatttctcttatatttttctcaccatctacaattgcatccaatgt 14265690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 35308209 - 35308158
Alignment:
Q  130 attaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    ||||| ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  35308209 attaatatctctccattaagtgtcagactcttcgtgtctgtgatccaccacc 35308158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 284372 - 284322
Alignment:
Q  49 atatatatgagtcatctcacttatatgtttctcaacatctactattgcatc 99  Q
    |||||| || |||||||||| |||||||| |||||||||||||||| ||||    
T  284372 atatatgtgtgtcatctcacatatatgttactcaacatctactattccatc 284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 13918326 - 13918248
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||||| |||||||||  | || ||||||| || |||||||||| | |  ||||||||||||| ||||||||||||    
T  13918326 gtcatctcaattatatgttgttgaaaatctactcttccatccaatgtataacgttaactcacatttgacacattaacat 13918248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 39977291 - 39977241
Alignment:
Q  49 atatatatgagtcatctcacttatatgtttctcaacatctactattgcatc 99  Q
    |||||| || |||||||||||||||||||  ||||||||||||||| ||||    
T  39977291 atatatgtgtgtcatctcacttatatgttattcaacatctactattccatc 39977241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 42727913 - 42728027
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    ||||| ||||| ||||||||||  ||| | |||||||||| ||||||| |||||   | ||||| | ||| || |||||||||||| ||||  |||| |     
T  42727913 tatattagtcacctcacttatacatttatgaacatctactcttgcatcaaatgtaaaactttaagtaacaattgacacattaacatatctcacttaattg 42728012  T
Q  152 tgagactctttgtgt 166  Q
    |||||||||||||||    
T  42728013 tgagactctttgtgt 42728027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 312913 - 312872
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  312913 tcatctcacttatatgtttcttaacatttacttttgcatcca 312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 14266234 - 14266331
Alignment:
Q  28 tcacccaaaatcttaagaa-ttatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacattt 124  Q
    |||||| |||||||||||| |||  |||||| |||||||||||||| ||||  ||||  ||||||||| |||||||| | | | ||||| ||||||||    
T  14266234 tcaccctaaatcttaagaaattagttatatgggtcatctcacttatttgttgttcaaattctactatttcatccaatatataactttaattcacattt 14266331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 42756826 - 42756915
Alignment:
Q  67 acttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgaga 156  Q
    ||||||||||| ||||| || || | |||||||||||||   | ||| |||||||  | |||||||||||||||||| |||||| |||||    
T  42756826 acttatatgttgctcaatatatagtcttgcatccaatgtagaagttttactcacaaatgacacattaacatctctcccttaagtgtgaga 42756915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 48683272 - 48683180
Alignment:
Q  52 tatatgagtcatctcacttatatgttt--ctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctc 142  Q
    |||||||||||| |||||| | ||| |  |||||| || ||| |||| | |||||||  | |||||||||||||| |||||||||||||||||    
T  48683272 tatatgagtcatatcacttttgtgtgttgctcaacttccactcttgctttcaatgtgaaactttaactcacatttgacacattaacatctctc 48683180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 488
Target Start/End: Complemental strand, 11559224 - 11559180
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||||||||||||||||| |||| ||||| |||| ||||||||    
T  11559224 atgacgaaattctaacccgtatttgacacggatgtctatactagt 11559180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 13910240 - 13910148
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatc 138  Q
    |||| |||||||  |||||||| |||||||||||||  | ||||||  ||||| |||| ||  | |||||||||||| | |||||||||||||    
T  13910240 attagatatatggatcatctcatttatatgtttctcttcgtctactgatgcattcaatatggaactttaactcacatatgacacattaacatc 13910148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 35307901 - 35307857
Alignment:
Q  445 tgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||| |||||||||||||| ||| ||||||||||||| ||||||    
T  35307901 tgacggaattctaacccgtgcttgacacgggtgtccatgctagtt 35307857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 384; Significance: 0; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 11 - 489
Target Start/End: Original strand, 3395400 - 3395878
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgtta 109  Q
    |||| |||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  3395400 agattgacatcacaacttcacccaaaatcttaagacattagatatatgagtcatctcacttatatgtttctcaacatctactattgcattcaaagtgtta 3395499  T
Q  110 ttttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgt 209  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3395500 ttttaactcacacctgacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgt 3395599  T
Q  210 tgaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgtt 309  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  3395600 tgaagcggatatgatatcaccattggaacttatggggagacaacacttgtgtgaatcgacacgttgcagaaagagcaatcacacaagtgaaaatgatgtt 3395699  T
Q  310 acattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtga 409  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  3395700 acattttcatccaaaattttaagacttaagtatatgatttattttttacttatttgttcttcaacctccaatattttatccaatgttgatatttaactga 3395799  T
Q  410 cacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  3395800 cacttgatatatcac-atattctctccattgaaaatgacgtaattctagcccgtgcttggcacgggtgtccatactagtt 3395878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 486
Target Start/End: Original strand, 5788821 - 5789298
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttat 110  Q
    |||| |||||||||| |||||||||||||||||||  | || |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  5788821 agattgacatcacaacttcacccaaaatcttaagacat-tagatatgagtcatctcacttatatgttgttcaacatctactattgcattcaatgtgttat 5788919  T
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgtt 210  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||  ||| ||||||||||||    
T  5788920 tttaactcacatttgacacattaacatctcttcattaagtatgagactctctgtgtctgcgatccaccaccacgaaccacttccgcttcccaaaaatgtt 5789019  T
Q  211 gaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaat--cgacgcattgcagaaagagcaatcacacaagtgagaatgatgt 308  Q
    ||||||| |||||||||| |||||  |||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||    
T  5789020 gaagcgggtatgatatcaacattgagacttatggggagccaacacttgtgtgaatgatgacacattgcagaaagagcaatcacacaagtgagaatgatgt 5789119  T
Q  309 tacattttcattcaaaattttaagacttaagtatatga-tttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagt 407  Q
    ||||| ||||| ||||| || ||||||||| |  || | | ||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| |    
T  5789120 tacatcttcatccaaaacttcaagacttaactgaataagtctatttttcacttatttgttcttcaacctccaatgttttatccaatattgagatttaact 5789219  T
Q  408 gacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    |||||||||||||| |||||||||| || ||||||  |||||||||||||||  ||||||| ||||| |||| ||||||    
T  5789220 gacacttgatacattacaatattctttcaattgaaggtgacgaaattctaacatgtgtttgtcacggatgtctatacta 5789298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 212 - 488
Target Start/End: Original strand, 41754523 - 41754800
Alignment:
Q  212 aagcggatatgatatcaccattggaacttatgggg-agccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgtta 310  Q
    |||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||    
T  41754523 aagcagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgtta 41754622  T
Q  311 cattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgac 410  Q
    ||| ||||| |||||||| ||| ||||||||||||| ||  |||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||   ||    
T  41754623 catcttcatccaaaatttaaagtcttaagtatatgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatac 41754722  T
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    | || |||| | |||| ||||||||| || |  |||||||||||||| |||||| ||||||||||||||||| |||||    
T  41754723 atttaatactttacaacattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagt 41754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 19040799 - 19040663
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||||||    
T  19040799 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccat 19040701  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
    ||||| | ||  ||||||||| ||   |||||||||||    
T  19040700 taagtgtcaggatctttgtgtttgtagtccaccaccaa 19040663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 489
Target Start/End: Complemental strand, 34723156 - 34722879
Alignment:
Q  216 ggatatgatatcaccattggaacttat-ggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacatt 314  Q
    |||||||||| || | ||||| ||||| ||||||||||||||  |||| |||||  ||||  ||||||| ||| || |||||||| ||||||   ||||     
T  34723156 ggatatgataccatcgttggaccttataggggagccaacactaatgtggatcgaa-cattagagaaagaacaaccatacaagtgaaaatgataccacatc 34723058  T
Q  315 ttcattcaaaattttaagacttaagtatatga----tttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgac 410  Q
     |||||||||||| ||||||||||||||||||    ||| | ||||||||||||||| |  |||||||| ||| ||||||||| ||    ||||| | ||    
T  34723057 atcattcaaaattgtaagacttaagtatatgagttttttttctttcacttatttgttgtcaaacctccactattttatccaatatttgactttaactaac 34722958  T
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    || |||||||||  |||||| | ||| || || |||| |||||| |||| ||||  || ||||| ||||||||||||||    
T  34722957 acatgatacatcgtaatattatttcccttaaatatgatgaaattttaactcgtgcatgacacggctgtccatactagtt 34722879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 39839072 - 39839208
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || |||||||||||||||||| |    
T  39839072 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccgt 39839170  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
    ||||| | ||  ||||||||| ||   |||||||||||    
T  39839171 taagtgtcaggatctttgtgtttgtagtccaccaccaa 39839208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 29977350 - 29977456
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||||| |||||||  | ||||||| ||| || ||||||||||||| |||| | || ||    
T  29977350 tatatgagtcatatcacttatatgtttatcaacatccactcttgcattcaatgtggaactttaacttacacttgacacattaacatcactccctcaatta 29977449  T
Q  152 tgagact 158  Q
    |||||||    
T  29977450 tgagact 29977456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 36720205 - 36720068
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgtta 109  Q
    |||| |||||||||  |||||||||| |||| ||| ||||  ||||||  |||||||||||||||||| |||||||| || |||||||  || |||   |    
T  36720205 agattgacatcacatcttcacccaaagtcttcagacattaggtatatggatcatctcacttatatgttgctcaacatatattattgcacacattgtagaa 36720106  T
Q  110 ttttaactcacatttaacacattaacatctctccatta 147  Q
    |||||||||||| || |||||||||||||||| |||||    
T  36720105 ttttaactcacacttgacacattaacatctcttcatta 36720068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 36727623 - 36727707
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaaca 136  Q
    ||||| ||||||||||| ||||||||||| |||||||||| ||||||| ||||||  ||||||| ||||| || |||||||||||    
T  36727623 tatattagtcatctcacatatatgtttcttaacatctacttttgcatctaatgtgaaattttaagtcacaattgacacattaaca 36727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 41754117 - 41754196
Alignment:
Q  20 tcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcat 98  Q
    |||||| ||||||||||||||||| | |||| ||| ||||||||| |||  |||||||||||||||||||||||||||||    
T  41754117 tcacaacttcacccaaaatcttaatacattagatacatgagtcatatcatatatatgtttctcaacatctactattgcat 41754196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 488
Target Start/End: Original strand, 30638096 - 30638321
Alignment:
Q  259 tgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcac 358  Q
    ||||| ||||| ||| ||| | |||| || ||||||||||||||||||   |||| |||||  | || || |||||||||  |||||| || || || |     
T  30638096 tgtgattcgacacatcgcaaagagagaaagcacacaagtgagaatgattccacatattcatagacaaattgaagacttaa--atatgagtt-ttattaat 30638192  T
Q  359 ttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaa 458  Q
    |||||| || ||||||||||| | |||||| |||| ||||  |||||   ||||||||||||||| |  ||| ||||| |  || ||||||||||| |||    
T  30638193 ttatttattgttcaacctccactttcttattcaatattgaactttaaccaacacttgatacatcaaagcattttctccctcaaatatgacgaaatt-taa 30638291  T
Q  459 cccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| |||||||||||||||||||||||    
T  30638292 cccgtgcttggcacgggtgtccatactagt 30638321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 34425580 - 34425689
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    |||||||||| || |||||||||||||  |||||||||| ||||||||||||||||  | ||||| ||||| || |||| ||||| ||| ||  | ||||    
T  34425580 atatatgagttatatcacttatatgttgttcaacatctattattgcatccaatgtggaactttaaatcacacttgacacgttaacctctttctctcaagt 34425679  T
Q  151 atgagactct 160  Q
    ||||||||||    
T  34425680 atgagactct 34425689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 29651860 - 29651760
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    |||| ||||||| |||||  |||||||||||| |||||| |||||||  | |||||||||||||| ||||||||||||| || | | |||||||| ||||    
T  29651860 tcatatcacttagatgttgttcaacatctactcttgcattcaatgtgaaactttaactcacatttgacacattaacatcacttcctcaagtatgaaactc 29651761  T
Q  160 t 160  Q
    |    
T  29651760 t 29651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 392
Target Start/End: Original strand, 36729484 - 36729598
Alignment:
Q  277 agaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacct 376  Q
    ||||||| ||||||||||  ||||||||||   |||| ||||||||||||||||||||| |||||||| | || |||| |||||||||||| | | ||||    
T  36729484 agaaagaacaatcacacagctgagaatgataccacatattcattcaaaattttaagactcaagtatataagtt-ttttccacttatttgttgtccgacct 36729582  T
Q  377 ccaatatcttatccaa 392  Q
    ||| |||  |||||||    
T  36729583 ccattattctatccaa 36729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 39406292 - 39406363
Alignment:
Q  418 acatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||| |||||||||||| |  |  |||| ||||||||| |||||||||||||||||||||||||||||||    
T  39406292 acatcataatattctctccctcaactatgatgaaattctagcccgtgtttggcacgggtgtccatactagtt 39406363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 161
Target Start/End: Complemental strand, 45659927 - 45659828
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||||||||||||||||| |||| |||||||  |||||||||| ||| | ||| | ||||| || |||| |||||||||||||  ||||| ||||||||    
T  45659927 tcatctcacttatatgtttttcaagatctact--tgcatccaatttgtaactttgagtcacaattgacactttaacatctctcccataagtgtgagactc 45659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 29978124 - 29978165
Alignment:
Q  447 acgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  29978124 acgaaattctagcccgtgtttggcacgggtgtccatactagt 29978165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 38796902 - 38796797
Alignment:
Q  33 caaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacat 131  Q
    ||||||||||||  |||| | |||| |||||| |||||||||||||||||||||| |||| || |||||||| ||  ||||||| ||||| || |||||     
T  38796902 caaaatcttaaggcattagacatattagtcatttcacttatatgtttctcaacatatactctttcatccaatatgaaattttaagtcacagttgacacac 38796803  T
Q  132 taacat 137  Q
    ||||||    
T  38796802 taacat 38796797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 36729280 - 36729363
Alignment:
Q  67 acttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    |||||||||||  |||||||||||| |||||| |||||||  ||||| ||||||| || ||| |||||||| ||||||| ||||    
T  36729280 acttatatgttgttcaacatctactcttgcatacaatgtgaaatttttactcacacttgacaaattaacatatctccataaagt 36729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 20106660 - 20106738
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    |||||||||||||||| ||  |||| ||||||| || |||||||||| | |  ||||||||||||| ||||||||||||    
T  20106660 gtcatctcacttatattttattcaaaatctactcttccatccaatgtataacgttaactcacatttgacacattaacat 20106738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 40599682 - 40599752
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    ||||||| ||| ||||||||||||||||||| | | |||||||||||||||||  |||| |||| ||||||    
T  40599682 tttaacttacacttaacacattaacatctcttcctcaagtatgagactctttgcatctgtgatctaccacc 40599752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 342
Target Start/End: Complemental strand, 45658385 - 45658290
Alignment:
Q  245 ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtat 342  Q
    ||||| ||||||  ||||||||||||||||| |||||| ||||  ||||| |||| || ||   ||||||||||| |||||||||||| |||||||||    
T  45658385 ggagcgaacactaatgtgaatcgacgcattggagaaagggcaa--acacatgtgaaaacgagactacattttcatccaaaattttaaggcttaagtat 45658290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 182
Target Start/End: Complemental strand, 6466243 - 6466121
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    ||||||| | ||||| || | |||||| ||||||| |||| |||||||||||||   ||||||| |||||    |||| ||||||| |||||||||||      
T  6466243 tatatgaataatctctctcaaatgtttttcaacatttactcttgcatccaatgtcaaattttaattcaca----acacgttaacatttctccattaag-- 6466150  T
Q  152 tgagactctttgtgtctgcgatccaccacca 182  Q
      ||||||| |||||||| ||||||||||||    
T  6466149 --agactctctgtgtctgtgatccaccacca 6466121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 14873517 - 14873420
Alignment:
Q  62 atctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctt 161  Q
    ||||||||||||||||| |||| ||||||  ||||||||||| ||  | ||| | ||||| || |||| |||||||||||||  ||||| ||||||||||    
T  14873517 atctcacttatatgtttttcaagatctac--ttgcatccaatttggaactttgagtcacaattgacactttaacatctctcccataagtgtgagactctt 14873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 29975884 - 29975964
Alignment:
Q  26 tttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    ||||||||||||||||| || ||||  ||||||||||||||  ||||||| ||||||| ||  |||||||||||| |||||    
T  29975884 tttcacccaaaatcttatgacattaggtatatgagtcatctgtcttatatttttctcaccacttactattgcatctaatgt 29975964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 36729645 - 36729685
Alignment:
Q  449 gaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  36729645 gaaattctaatccgtgcttggcacgggtgtccatactagtt 36729685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 14868902 - 14868824
Alignment:
Q  69 ttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||||||| |||| || ||||| |||| | |||||||  ||||||||| ||| | ||||||||||||||||||||||||    
T  14868902 ttatatgttgctca-cagctactcttgcttacaatgtgaaattttaacttacactgaacacattaacatctctccattaa 14868824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 19994416 - 19994486
Alignment:
Q  50 tatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcaca 121  Q
    |||||| |||||||||||||||||| || ||| ||||||||| |||||| |||| ||  |||||||||||||    
T  19994416 tatatacgagtcatctcacttatatattgctc-acatctactcttgcatacaatttgaaattttaactcaca 19994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 19994503 - 19994590
Alignment:
Q  126 acacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaa 213  Q
    |||||||| |||||||||||||||| | |||||||| |||||   ||||||||| ||||||| ||||  ||||| | | |||||||||    
T  19994503 acacattagcatctctccattaagtgtcagactcttcgtgtccatgatccaccatcaaaaactacttccgctcctccacaatgttgaa 19994590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 24968043 - 24967988
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||| || || |||||||||||||  |||||||||| ||||||||||||||||    
T  24968043 atatatgggttatatcacttatatgttgttcaacatctattattgcatccaatgtg 24967988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 2593201 - 2593281
Alignment:
Q  315 ttcattcaaaattttaagacttaagtatatgatttattttt---cacttatttgttcttcaacctccaatatcttatccaa 392  Q
    ||||| |||||||||||||||||| ||||||| || |||||   || ||||||||| ||||||||||| ||| | ||||||    
T  2593201 ttcatccaaaattttaagacttaaatatatgagtttttttttcccatttatttgttgttcaacctccactatttcatccaa 2593281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 31963699 - 31963777
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||| ||||||||||| ||||| ||||||| || |||| ||||| | |  ||||||| ||||| ||||||||||||    
T  31963699 gtcatctgacttatatgttgctcaaaatctactcttccatctaatgtataaagttaactcgcatttgacacattaacat 31963777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 39403435 - 39403514
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctc 140  Q
    ||||||||||  |||| ||||||| |||||||| ||||||||||| ||  | |||||||||||  ||| |||||||||||||    
T  39403435 gtcatctcac--atatttttctcatcatctactcttgcatccaatctgaaactttaactcacaaataaaacattaacatctc 39403514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Original strand, 10999561 - 10999594
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctc 433  Q
    |||||| |||||||||||||||||||||||||||    
T  10999561 atttaactgacacttgatacatcacaatattctc 10999594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 13439345 - 13439454
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||||||||  ||||||||||||| |||||||||| ||  |  ||||| ||||  | ||||| |||||||| ||||||| | || |||| | ||||||    
T  13439345 tatatgagtcacatcacttatatgttgctcaacatctgctcctttatccagtgtgaaactttaattcacatttgacacattgatatttctctactaagta 13439444  T
Q  152 tgagactctt 161  Q
    | ||||||||    
T  13439445 tcagactctt 13439454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 20443649 - 20443608
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||| ||| |||||||||||| |||||||||    
T  20443649 tcatctcacttatatttttgtcaacatctactcttgcatcca 20443608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 25547027 - 25546954
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacatta 133  Q
    |||| |||||||||||||| ||||||| |  | |||||||||||||   | |||||||||||||| ||||||||    
T  25547027 tcatatcacttatatgtttttcaacatatgttcttgcatccaatgtagaactttaactcacatttgacacatta 25546954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 31967332 - 31967373
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  31967332 tcatctcacttatatgtttcttaacatttacttttgcatcca 31967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 41753997 - 41754037
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctact 91  Q
    |||||| |||||||||||||||||||| ||||| |||||||    
T  41753997 atatattagtcatctcacttatatgttgctcaatatctact 41754037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 11 - 489
Target Start/End: Original strand, 43387047 - 43387525
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgtta 109  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  43387047 agattgacatcacaacttcacccaaaatcttaagacattagatatacgagtcatttcacttatatgtttctcaacatctactattgcattcaatgtgtaa 43387146  T
Q  110 ttttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgt 209  Q
    |||||||||||| || |||||||||||||||||  ||||||| ||||||||  ||||||||||||||| ||||  |||||||| ||||||| ||||||||    
T  43387147 ttttaactcacacttgacacattaacatctctctgttaagtacgagactctccgtgtctgcgatccac-accacgaaccacttttgctcccaaaaaatgt 43387245  T
Q  210 tgaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgtt 309  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| || || ||||| ||||||||||||||||| ||| |||||    
T  43387246 tgaaacggatatgatatcaccattgggacttatggggatccaacacttgtgtgaattgacacaatgtagaaaaagcaatcacacaagtgaaaataatgtt 43387345  T
Q  310 acattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtga 409  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| |||    
T  43387346 acatcttcatccaaaattttaagacttaagtatatgatttatttttcacttatatgttcttcaacctccaatattttatccaacgttgaaatttaattga 43387445  T
Q  410 cacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||||| ||||||||||||||||  |||||  || |||||||||||||||||| ||||||||  ||||||||||||||    
T  43387446 cacttgatgcatcacaatattctctatattgaggataacgaaattctaacccgtgcttggcacgaatgtccatactagtt 43387525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 20306717 - 20306857
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||||||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||||||    
T  20306717 attatgtatatgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccat 20306815  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaaaaac 187  Q
    ||||| | ||  ||||||||| ||   ||||||||| |||||    
T  20306816 taagtgtcaggatctttgtgtttgtagtccaccacccaaaac 20306857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 22636310 - 22636447
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatg 153  Q
    ||||||||| ||| |||||||||  ||||||||||||| |||||| ||| ||   ||||||||||||| || | | |||||||||||||||||||||||     
T  22636310 tatgagtcacctcccttatatgtagctcaacatctactcttgcattcaaagtcaaattttaactcacacttgaaaaattaacatctctccattaagtata 22636409  T
Q  154 agactctttgtgtctgcgatccaccaccaaaaaccact 191  Q
    ||||||| | ||| || ||||||| ||||| |||||||    
T  22636410 agactctctatgtttgggatccacaaccaagaaccact 22636447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 40946621 - 40946485
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||||||    
T  40946621 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccat 40946523  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
    ||||| | ||  ||||||||| ||   |||||||||||    
T  40946522 taagtgtcaggatctttgtgtttgtagtccaccaccaa 40946485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 30001726 - 30001862
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||| ||| || ||||||||||||||||||||    
T  30001726 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaacttacacttgacacattaacatctctccat 30001824  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
    ||||| | ||  ||||||||| ||   |||||||||||    
T  30001825 taagtgtcaggatctttgtgtttgtagtccaccaccaa 30001862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 1992524 - 1992421
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  | |||||||||||| |||| |   ||||||||||||| || ||||||||||||||||||||    
T  1992524 attatgtatgtgagtcatctcacttaaatgtttctcataa-ctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccat 1992426  T
Q  146 taagt 150  Q
    |||||    
T  1992425 taagt 1992421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 26531550 - 26531638
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaaca 136  Q
    |||| |||||||||||||||||||||||| |||||   |||||||||||||||| ||||||  | |||||||||||| ||||| |||||||    
T  26531550 attagatatatgagtcatctcacttatatttttctg--catctactattgcatctaatgtgaaactttaactcacatctaacatattaaca 26531638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 472
Target Start/End: Original strand, 22636505 - 22636704
Alignment:
Q  271 cattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttctt 370  Q
    ||||||||||||||||| || | ||||| |||||||   |||| || || ||||||||||||  ||||||||||||     |||||||||||||||| ||    
T  22636505 cattgcagaaagagcaaccatagaagtgggaatgataccacatctttatccaaaattttaaggattaagtatatga--gcattttcacttatttgttgtt 22636602  T
Q  371 caacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaa--atgacgaaattctaacccgtgtttg 468  Q
     ||  |||| ||| ||||||||||| |   ||||| |||||||| ||||||||   |||||||||  ||||||  ||||| ||||||||||| |||||||    
T  22636603 taaagtccactatgttatccaatgtcgggctttaactgacacttcatacatcattctattctctc--ttgaaagtatgacaaaattctaacctgtgtttg 22636700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 17006492 - 17006613
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  17006492 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 17006589  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  17006590 tatgagatctaccaccataaacca 17006613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 34159599 - 34159478
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  34159599 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 34159502  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  34159501 tatgagatctaccaccataaacca 34159478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 47783249 - 47783135
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||||||||||| |||||||||||||  | ||||  |||| ||||| ||||||||  | ||||||||||| || |||||||||||||| | | |    
T  47783249 attatgtatatgagtcatatcacttatatgttgttaaacaattactcttgcagccaatgtgaaactttaactcacacttgacacattaacatctattcct 47783150  T
Q  146 taagtatgagactct 160  Q
    ||| || ||||||||    
T  47783149 taaatacgagactct 47783135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 491
Target Start/End: Original strand, 31090530 - 31090738
Alignment:
Q  281 agagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaa 380  Q
    |||||||||||||||||||||||  |   |||| |||||  |||| | |||| |||| |||||||| |  |||||||| ||||| || |||||||| ||     
T  31090530 agagcaatcacacaagtgagaatagtaacacatgttcatcaaaaaatctaaggcttacgtatatgagt--tttttcacgtatttattattcaaccttcag 31090627  T
Q  381 tatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtcc 480  Q
    | | ||||| |||||||   ||||| | |||||| |||||  |||||||||||||| |  |   |||| ||||||||    |||||||||||||||||||    
T  31090628 tcttttatctaatgttggattttaatttacactttatacaatacaatattctctccctcaagtgtgacaaaattctagtatgtgtttggcacgggtgtcc 31090727  T
Q  481 atactagttat 491  Q
    |||||| ||||    
T  31090728 atactaattat 31090738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 31089541 - 31089647
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||||| |||||||||| ||||| || |||| || ||||||||||   | ||||||| |||| | |||||||||||| ||||| |||||| ||||| |     
T  31089541 tcatctcgcttatatgttgctcaaaatatactctttcatccaatgtagaaatttaacttacatatgacacattaacatatctcccttaagtgtgagattt 31089640  T
Q  160 tttgtgt 166  Q
    |||||||    
T  31089641 tttgtgt 31089647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 7844607 - 7844716
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||| || || |||||||||||||  |||||||||| |||||||||||||||   | ||||| ||||| || |||| ||||| ||| ||  | ||||    
T  7844607 atatatgggttatatcacttatatgttgttcaacatctattattgcatccaatgtagaactttaaatcacaattgacacgttaacctctttctctcaagt 7844706  T
Q  151 atgagactct 160  Q
    ||||||||||    
T  7844707 atgagactct 7844716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 8313411 - 8313508
Alignment:
Q  84 catctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    |||||||| |||||| ||||||   |||||||||  || |||| ||||||||||||||||||||||| | |||||||  ||||  | |||||||||||    
T  8313411 catctactcttgcatacaatgtaaaattttaactttcacttaatacattaacatctctccattaagtgtcagactctccgtgttcgtgatccaccacc 8313508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 16852024 - 16851963
Alignment:
Q  87 ctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||| |||||| |||||||  ||||||||| ||| | ||||||||||||||||||||||||    
T  16852024 ctactcttgcatacaatgtgaaattttaacttacactgaacacattaacatctctccattaa 16851963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 43385108 - 43385157
Alignment:
Q  50 tatatatgagtcatctcacttatatgtttctcaacatctactattgcatc 99  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  43385108 tatatatgagtcatctcacatatatgttattcaacatctactattccatc 43385157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 16853730 - 16853598
Alignment:
Q  28 tcacccaaaatcttaa-gaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaa 126  Q
    |||||||||| ||||| | ||||| |||||   ||||||||||||||||||| |||| || ||||  |||||||||| ||  | ||| | ||||| || |    
T  16853730 tcacccaaaaccttaaagcattatgtatattgatcatctcacttatatgtttttcaagatttact--tgcatccaatttgaaactttgagtcacaattga 16853633  T
Q  127 cacattaacatctctccattaagtatgagactctt 161  Q
    ||| |||||||||||||  ||||| ||||||||||    
T  16853632 cactttaacatctctcccataagtgtgagactctt 16853598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 19065742 - 19065797
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||| ||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  19065742 atatatgggtcatatcacttatatattgttcaacatttactattgcatccaatgtg 19065797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 19113632 - 19113687
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||| ||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  19113632 atatatgggtcatatcacttatatattgttcaacatttactattgcatccaatgtg 19113687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 21469816 - 21469867
Alignment:
Q  55 atgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  21469816 atgagtcatatcacttatatattgttcaacatttactattgcatccaatgtg 21469867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 40946292 - 40946249
Alignment:
Q  446 gacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  40946292 gacgacattctaacccgtgcttggcacgggtgtccatgctagtt 40946249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 3838181 - 3838251
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    ||||||| ||| || |||||||||||||||  | | |||||||||||||||||| |||| |||| ||||||    
T  3838181 tttaacttacacttgacacattaacatctcgtcctcaagtatgagactctttgtatctgtgatctaccacc 3838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 486
Target Start/End: Original strand, 3838424 - 3838497
Alignment:
Q  413 ttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    |||||| ||||||||||| ||| | |  || |||| ||||||||| |||||| ||||||||||| |||||||||    
T  3838424 ttgatatatcacaatattatcttcctctaatatgaagaaattctagcccgtgcttggcacgggtatccatacta 3838497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 31088786 - 31088834
Alignment:
Q  60 tcatctcacttata--tgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||||  |||||||||||| ||||| ||||||||||||||    
T  31088786 tcatctcacttatatatgtttctcaacacctactcttgcatccaatgtg 31088834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 49880371 - 49880330
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  49880371 tcatctcacttatatgtttcttaacatttacttttgcatcca 49880330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 31420839 - 31420732
Alignment:
Q  238 cttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagactta 337  Q
    ||||||||||||||| |||  |||  |||||  ||||  ||||  ||||| ||||||||||| ||||||  ||||| ||||| ||||| ||||||||| |    
T  31420839 cttatggggagccaaaactgatgttgatcgatacatttgagaagaagcaaccacacaagtgacaatgat-atacatcttcatccaaaactttaagactca 31420741  T
Q  338 agtatatga 346  Q
    |||||||||    
T  31420740 agtatatga 31420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 486
Target Start/End: Original strand, 33194 - 33671
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttat 110  Q
    |||| |||||||||| |||||||||||||||||||  | || |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  33194 agattgacatcacaacttcacccaaaatcttaagacat-tagatatgagtcatctcacttatatgttgttcaacatctactattgcattcaatgtgttat 33292  T
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgtt 210  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||  ||| ||||||||||||    
T  33293 tttaactcacatttgacacattaacatctcttcattaagtatgagactctctgtgtctgcgatccaccaccacgaaccacttccgcttcccaaaaatgtt 33392  T
Q  211 gaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaat--cgacgcattgcagaaagagcaatcacacaagtgagaatgatgt 308  Q
    ||||||| |||||||||| |||||  |||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||    
T  33393 gaagcgggtatgatatcaacattgagacttatggggagccaacacttgtgtgaatgatgacacattgcagaaagagcaatcacacaagtgagaatgatgt 33492  T
Q  309 tacattttcattcaaaattttaagacttaagtatatga-tttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagt 407  Q
    ||||| ||||| ||||| || ||||||||| |  || | | ||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| |    
T  33493 tacatcttcatccaaaacttcaagacttaactgaataagtctatttttcacttatttgttcttcaacctccaatgttttatccaatattgagatttaact 33592  T
Q  408 gacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    |||||||||||||| |||||||||| || ||||||  |||||||||||||||  ||||||| ||||| |||| ||||||    
T  33593 gacacttgatacattacaatattctttcaattgaaggtgacgaaattctaacatgtgtttgtcacggatgtctatacta 33671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 20 - 488
Target Start/End: Original strand, 42797242 - 42797711
Alignment:
Q  20 tcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactc 118  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  42797242 tcacaacttcacccaaaatcttaagacattagatacatgagtcatctcacttatatgtttctcaacatatactattgcattcaatgtgttattttaactc 42797341  T
Q  119 acatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcgga 218  Q
    ||| || |||||||||||||| || |||||| |||||||||| ||| ||||| ||||||||||| | |||||||  ||||||||||||||||||||| ||    
T  42797342 acacttgacacattaacatctttctattaagcatgagactctctgtatctgctatccaccaccacagaccacttccgctccccaaaaatgttgaagcaga 42797441  T
Q  219 tatgatatcaccattggaacttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttca 318  Q
    ||||||||||||||||  ||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||| ||||    
T  42797442 tatgatatcaccattgagacttacgaggagcaaacacttgtgtgaatcgacacattgcagaaagagcaatcacacgagtgataatgatgtcacatcttca 42797541  T
Q  319 ttcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgata 418  Q
    | |||||||| ||| |||||||||| || ||  |||||||||||||  ||| ||||||||||||| ||||||||| || | ||||||   ||| || |||    
T  42797542 tccaaaatttaaagtcttaagtataagagtttattttcacttatttactctccaacctccaatattttatccaatattaagatttaacatacatttaata 42797641  T
Q  419 catcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    | | |||||||||||||| || |  ||||||||||| || |||||  ||||||||||||||||| |||||    
T  42797642 ctttacaatattctctcccttaaggatgacgaaattttagcccgtacttggcacgggtgtccatgctagt 42797711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 489
Target Start/End: Original strand, 23141752 - 23142224
Alignment:
Q  20 tcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactc 118  Q
    |||||| ||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23141752 tcacaacttcacccaaaatcttaagacattagatacatgagtcatctcatttatatgtttctcaacatctactattgcattcaatgtgttattttaactc 23141851  T
Q  119 acatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcgga 218  Q
    | | || |||| |||||||||||| |||||| |||||||||| ||| ||||| |||||||||||   |||||||  ||||||| ||||||||||||| ||    
T  23141852 atacttgacacgttaacatctctctattaagcatgagactctctgtatctgctatccaccaccacggaccacttccgctccccgaaaatgttgaagcaga 23141951  T
Q  219 tatgatatcaccattggaacttat-ggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttc 317  Q
    ||||||||||||||||  |||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||| |||    
T  23141952 tatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatcttc 23142051  T
Q  318 attcaaaattttaagacttaagtatatga-tttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttga 416  Q
    || |||||||| ||| ||||||||| ||| |||  |||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||   ||| || |    
T  23142052 atccaaaatttaaagtcttaagtatttgagttttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatacatttaa 23142151  T
Q  417 tacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||| | | |||||||||||| || |  |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  23142152 tactttaaaatattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagtt 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 488
Target Start/End: Complemental strand, 13756666 - 13756203
Alignment:
Q  20 tcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactc 118  Q
    |||||| ||||||||||||||||||| |||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  13756666 tcacaacttcacccaaaatcttaagacattagatacatgagtcatttcacttaaatgtttctcaacatctactattgcattcaatgtgttattttaactc 13756567  T
Q  119 acatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcgga 218  Q
    ||| || |||||||||||| |||  |||||| |||||||||||||| ||| | |||||||||||   |||||||  ||||||||||||||||||||| ||    
T  13756566 acacttgacacattaacatatctatattaagcatgagactctttgtatctactatccaccaccacggaccacttccgctccccaaaaatgttgaagcaga 13756467  T
Q  219 tatgatatcaccattggaacttatg-gggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttc 317  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  13756466 tatgatatcaccattgggacttatgtggaagccaacgcttgtgtgaatcgacacattgcagaaagagcaatcacacaagtgataatgatgttacatcttc 13756367  T
Q  318 attcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgat 417  Q
    || |||||||       | |||||||||| ||  |||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||   | | || ||    
T  13756366 atccaaaatt-------taaagtatatgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatatatttaat 13756274  T
Q  418 acatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    || | |||||||||||||| ||  | ||||||||||| || |||||| ||||||||||||||||| |||||    
T  13756273 actttacaatattctctcccttagagatgacgaaattttagcccgtgcttggcacgggtgtccatgctagt 13756203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 54 - 394
Target Start/End: Original strand, 21588824 - 21589166
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactat-tg-catccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||||||||||||| |||||||  |||| ||||| ||| || ||| ||||||||||||||||| |||  || |||||||| |||||||| ||||| ||    
T  21588824 tatgagtcatctcactgatatgttattcaatatctattatatgacattcaatgtgttattttaacccacccttgacacattaccatctctcaattaaata 21588923  T
Q  152 tgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcggatatgatatcaccattggaactta-tggggagcc 250  Q
     || |||||| |||||  |||||||||||||  || |||||  |||||||| || |||||||||| ||||||||||||||||||||||||  |||||| |    
T  21588924 cgatactcttcgtgtccacgatccaccaccacgaagcactttcgctccccataattgttgaagcgtatatgatatcaccattggaacttacgggggagac 21589023  T
Q  251 aacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgattta 350  Q
    ||||||||||||| ||||| ||||||||||| | ||| |||||| |||||||||||||  ||| ||| |||||||||||||| ||| |||||  | |||     
T  21589024 aacacttgtgtgattcgacacattgcagaaaaaacaaccacacaggtgagaatgatgtcgcatcttctttcaaaattttaaggctttagtatgag-tttt 21589122  T
Q  351 tttttcacttatttgttcttcaacctccaatatcttatccaatg 394  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||    
T  21589123 ttttccacttatttgttcttcgacctccaatattttatccaatg 21589166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 281 - 489
Target Start/End: Original strand, 10901547 - 10901754
Alignment:
Q  281 agagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaa 380  Q
    ||||||||| ||||||||| ||||||||||||| ||||| |||||||  ||||||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  10901547 agagcaatcgcacaagtgaaaatgatgttacatcttcatccaaaatt--aagacttaaatatataatttatttttcatttatatgttcttcaacctccaa 10901644  T
Q  381 tatcttatccaatgttgatatttaagtg-acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtc 479  Q
    ||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||||||  |||||||||||||| |||||| ||||||| ||||||    
T  10901645 tattttatccaatgttgagatttaactgaacacttgatacattacaatattctctccattgaggatgacgaaattctagcccgtgcttggcacaggtgtc 10901744  T
Q  480 catactagtt 489  Q
     |||||||||    
T  10901745 tatactagtt 10901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 10901390 - 10901540
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgtta 109  Q
    |||| |||||||||| ||||||||||||||||| | |||| ||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  10901390 agattgacatcacaacttcacccaaaatcttaacacattagatatacgagtcatctcacttgtatgttactcaacatctactattgcattcaatgtgtta 10901489  T
Q  110 ttttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  10901490 ttttaactcacatttgatacattaacatctctccattaagtacgagactct 10901540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 489
Target Start/End: Original strand, 21589269 - 21589357
Alignment:
Q  401 tttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||| ||||||||||||| |||||||||||||||||||  | ||| |||||||||| |||||| |||||||||||||||| |||||||    
T  21589269 tttaactgacacttgatacgtcacaatattctctccattagatatgccgaaattctagcccgtgcttggcacgggtgtccaaactagtt 21589357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 492
Target Start/End: Original strand, 40114449 - 40114541
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagttatt 492  Q
    |||||| |||||||  |||||||| |||||| ||||| |  |  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40114449 atttaactgacactaaatacatcataatattgtctccctcaactatgacgaaattctaacccgtgcttggcacgggtgtccatactagttatt 40114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 41529035 - 41529123
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| ||||||| ||||||||| |||||| ||||| | ||  |||||||||||||| |||||| |||||||||||||||||||||||    
T  41529035 atttaactgacactagatacatcataatattgtctccctcgactatgacgaaattctagcccgtgcttggcacgggtgtccatactagt 41529123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 238 - 376
Target Start/End: Complemental strand, 24481857 - 24481718
Alignment:
Q  238 cttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagactta 337  Q
    ||||||||| ||||||||| ||||  ||| || | ||| | ||||| ||||||||| ||||||||||||  ||||| ||| |||||||||||||| ||||    
T  24481857 cttatggggtgccaacactggtgtagatcaacacgttggaaaaagaacaatcacaccagtgagaatgatactacatcttctttcaaaattttaaggctta 24481758  T
Q  338 agtatatgatttattttt-cacttatttgttcttcaacct 376  Q
    ||| |  | ||| ||||| |||||||||||| ||||||||    
T  24481757 agtgtgagttttttttttccacttatttgttgttcaacct 24481718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 434
Target Start/End: Complemental strand, 757964 - 757816
Alignment:
Q  282 gagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaat 381  Q
    ||||||||||| ||||||||||||| | | |||||||| |||| ||||||   |||||||||| |    ||||||||||| ||||| |||||||||| ||    
T  757964 gagcaatcacataagtgagaatgatatcatattttcatccaaatttttaaagtttaagtatataa---gtttttcacttaattgttgttcaacctcc-at 757869  T
Q  382 atcttatccaatgttgatatttaagtgacacttgatacatcacaatattctct 434  Q
     | | |||||||||||   ||||| |||||||||||| ||||| |||||||||    
T  757868 ctttaatccaatgttgcgttttaattgacacttgataaatcacgatattctct 757816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 30254663 - 30254510
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcat--ctcactt-atatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||||  |||||||||| ||||  || ||||  |||||||||| |  ||||||| |||||||  ||||||| |||  ||||||| | |||     
T  30254663 agatggacatcacatcttcacccaaagtcttttgacattaggtatatgagtcgtgtctcactttatatgttgttcaacatatacgtttgcatctattgtc 30254564  T
Q  107 ttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
      |||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  30254563 gaattttaactcacatttgacacattaacatctttccgttaagtatgagactct 30254510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 16313248 - 16313369
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  16313248 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 16313345  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  16313346 tatgagatctaccaccataaacca 16313369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 34800903 - 34800782
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  34800903 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 34800806  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  34800805 tatgagatctaccaccataaacca 34800782  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 13759030 - 13758877
Alignment:
Q  7 aatgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    |||||||| |||| |||| ||| |||||||| ||||||| ||||  |||| | ||||||||||| |||||||  | |||| ||||| ||||||||||       
T  13759030 aatgagattgacaccacattttgacccaaaaccttaagacattaggtatacgggtcatctcactaatatgttgtttaacaactactcttgcatccaa--- 13758934  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgt 164  Q
      ||  |||||||||| || | |||||||||||||||  |||| |||||||||||||||    
T  13758933 --taggttaactcacacttgatacattaacatctctcttttaactatgagactctttgt 13758877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 17888130 - 17888052
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    |||||||||||||||||||  |||| ||||||| || |||||| ||| | || ||||||||||||| ||||||||||||    
T  17888130 gtcatctcacttatatgttgttcaaaatctactcttccatccagtgtataatgttaactcacatttgacacattaacat 17888052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 45527186 - 45527083
Alignment:
Q  261 tgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcactt 360  Q
    ||||||||  ||||| ||||||||||| ||||||||| ||||||||   |||| |||| ||||||||||||  ||||||||||| |   |||||||||||    
T  45527186 tgaatcgatacattggagaaagagcaaccacacaagtaagaatgatacgacatattcaatcaaaattttaaagcttaagtatataa--aatttttcactt 45527089  T
Q  361 atttgt 366  Q
    ||||||    
T  45527088 atttgt 45527083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 16221892 - 16221981
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||| ||||||| ||||||||| |||||| ||||| |  |  |||||||||||||| |||||| || ||||| |||||||||||||||    
T  16221892 atttaactgacactagatacatcataatattgtctccctcaactatgacgaaattctagcccgtgcttagcacgagtgtccatactagtt 16221981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 40885853 - 40885744
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    |||||||||| || |||||||||||||  ||||||| || ||||||||||||||||  ||||||| ||||| || |||  ||||| ||| ||  | ||||    
T  40885853 atatatgagttatatcacttatatgttgttcaacatttattattgcatccaatgtgaaattttaaatcacacttgacatgttaacctctttctctcaagt 40885754  T
Q  151 atgagactct 160  Q
    ||||||||||    
T  40885753 atgagactct 40885744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 37251164 - 37251285
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||| ||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  37251164 cacttatatgttactcaatatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 37251261  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  37251262 tatgagatctaccaccataaacca 37251285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 357601 - 357546
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  357601 atatatgagtcatatcacttatatattgttcaacatttactattgcatccaatgtg 357546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 488
Target Start/End: Original strand, 18432505 - 18432568
Alignment:
Q  425 aatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| |||||||| |  ||||| |||||||| |||||| |||||||||||||||||||||||    
T  18432505 aatattatctccattaagtatgacaaaattctagcccgtgcttggcacgggtgtccatactagt 18432568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 23683216 - 23683161
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  23683216 atatatgagtcatatcacttatatattgttcaacatttactattgcatccaatgtg 23683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 18431674 - 18431776
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgtt 210  Q
    ||||||||| |||| |||||||| |||||||||||||||| | |||||||  ||| | | |||| |||||||| |||||||    |||||| ||||||||    
T  18431674 tttaactcatatttgacacattatcatctctccattaagtgttagactctacgtgcccgtgatcgaccaccaagaaccactctcactcccccaaaatgtt 18431773  T
Q  211 gaa 213  Q
    |||    
T  18431774 gaa 18431776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 38292474 - 38292408
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtt 77  Q
    |||| ||||||||| ||||| |||||||||| || |  ||||||||||||||||||| |||||||||    
T  38292474 agattgacatcacattttcatccaaaatctttaggaacatatatatgagtcatctcatttatatgtt 38292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 12158092 - 12158035
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaat 103  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||| | |||||||||||    
T  12158092 attatgtatatgagtcttctcacttatatttttctcaccatctaatcttgcatccaat 12158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 41527026 - 41527115
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||  ||||| | |   ||||||||||||| || ||||||||| ||||||    
T  41527026 tatatgagtcatctcacttatatgttattcaaaatctactcttctatccactatagaattttaactcacacttgacacattaatatctct 41527115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 45247877 - 45247768
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||||||||||||| |||||| ||  ||||||  |||| |||||| ||| ||   | ||||||||||| || ||| ||||| |||||||| ||||||    
T  45247877 atatatgagtcatctcatttatattttgttcaacacatacttttgcattcaacgtagaactttaactcacacttgacatattaaaatctctcccttaagt 45247778  T
Q  151 atgagactct 160  Q
     |||||||||    
T  45247777 gtgagactct 45247768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 14376234 - 14376134
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||||||| || || ||||| ||||| ||||||||| || ||||||  | ||||| || || |||  |||||||||| ||| |||||||||||||||||    
T  14376234 tcatctcacgtaaatatttcttaacatttactattgcttctaatgtggaactttaagtcgcaattagtacattaacatatcttcattaagtatgagactc 14376135  T
Q  160 t 160  Q
    |    
T  14376134 t 14376134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 13758121 - 13758078
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactatt 94  Q
    |||||||||||||||||| ||||||||  |||||||||||||||    
T  13758121 atatatgagtcatctcacgtatatgttattcaacatctactatt 13758078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 18953362 - 18953425
Alignment:
Q  73 atgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaaca 136  Q
    |||||| |||||||||||| |||||||||||||   ||||||| ||||| || |||||||||||    
T  18953362 atgtttttcaacatctactcttgcatccaatgtcaaattttaattcacagttgacacattaaca 18953425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 43215796 - 43215930
Alignment:
Q  7 aatgagatggacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    |||||||| |||| |||| ||| | ||||||| || |||   || |||||||||||| | |||||||||||  ||| |||||||| || |||| | |||     
T  43215796 aatgagattgacaccacatttttatccaaaatatttagacacatgtatatgagtcattt-acttatatgttattcatcatctactctttcatctattgta 43215894  T
Q  107 ttattttaactcacatttaacacattaacatctctc 142  Q
      ||||||||||| ||| ||||||||||||||||||    
T  43215895 aaattttaactcatattaaacacattaacatctctc 43215930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 8358803 - 8358881
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    |||||||||||||||||||  |||| ||||||| || |||| | ||| | |  ||||||||||||| ||||||||||||    
T  8358803 gtcatctcacttatatgttgttcaaaatctactcttccatcgagtgtataacgttaactcacatttgacacattaacat 8358881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 21586487 - 21586537
Alignment:
Q  49 atatatatgagtcatctcacttatatgtttctcaacatctactattgcatc 99  Q
    |||||| || |||||||||||||||||||  ||||||||||||||| ||||    
T  21586487 atatatgtgtgtcatctcacttatatgttattcaacatctactattccatc 21586537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 14373650 - 14373561
Alignment:
Q  385 ttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgg 474  Q
    ||||||||||||||  |||||  ||||||||||| ||||||||||||| | | || |  || ||||||||||| |||||| || ||||||    
T  14373650 ttatccaatgttgagctttaaacgacacttgataaatcacaatattctttaccttaagtataacgaaattctagcccgtgcttagcacgg 14373561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 15277766 - 15277827
Alignment:
Q  87 ctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||| |||| | |||||||  ||||||||| ||| | ||||||||||||||||||||||||    
T  15277766 ctactcttgcttacaatgtgaaattttaacttacactaaacacattaacatctctccattaa 15277827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 15458135 - 15458196
Alignment:
Q  87 ctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||| |||| | |||||||  ||||||||| ||| | ||||||||||||||||||||||||    
T  15458135 ctactcttgcttacaatgtgaaattttaacttacactaaacacattaacatctctccattaa 15458196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 32916921 - 32916820
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    ||||||||| ||||||||| ||||  |||||   || |||||||||||  | | ||| |||||||| |||||||| ||||||||| |||| | |||||||    
T  32916921 gtcatctcagttatatgttgctcattatctatatttacatccaatgtgaaactctaagtcacatttgacacattagcatctctcccttaaatgtgagact 32916822  T
Q  159 ct 160  Q
    ||    
T  32916821 ct 32916820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 36754531 - 36754572
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  36754531 tcatctcacttatatgtttcttaacatttacttttgcatcca 36754572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 41528504 - 41528545
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  41528504 tcatctcacttatatgtttcttaacatttacttttgcatcca 41528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 43216924 - 43216998
Alignment:
Q  28 tcacccaaaatcttaa-gaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaat 103  Q
    |||||||||||||||| | ||||| |||||   ||||||||||||||||||| |||| ||||||  |||||||||||    
T  43216924 tcacccaaaatcttaaagcattatgtatattgatcatctcacttatatgtttttcaagatctac--ttgcatccaat 43216998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 8357693 - 8357749
Alignment:
Q  109 attttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    ||||||||||||| || ||||||| |||| ||  |||||||| ||||||||||||||    
T  8357693 attttaactcacacttgacacattgacatttcaacattaagtttgagactctttgtg 8357749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 10280475 - 10280443
Alignment:
Q  50 tatatatgagtcatctcacttatatgtttctca 82  Q
    |||||||||||||| ||||||||||||||||||    
T  10280475 tatatatgagtcatttcacttatatgtttctca 10280443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 15342301 - 15342405
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||||||||||||  |||| || || | || |||||||| | | | ||||||||||| |||| ||||||| ||||||  || |||| ||| |||    
T  15342301 gtcatctcacttatatgttgttcaaaatgtaatcttccatccaatatataactttaactcacacttaatacattaatatctcttaatcaagtgtgaaact 15342400  T
Q  159 ctttg 163  Q
    |||||    
T  15342401 ctttg 15342405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 15431366 - 15431470
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||||||||||||  |||| || || | || |||||||| | | | ||||||||||| |||| ||||||| ||||||  || |||| ||| |||    
T  15431366 gtcatctcacttatatgttgttcaaaatgtaatcttccatccaatatataactttaactcacacttaatacattaatatctcttaatcaagtgtgaaact 15431465  T
Q  159 ctttg 163  Q
    |||||    
T  15431466 ctttg 15431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 15522670 - 15522774
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||||||||||||  |||| || || | || |||||||| | | | ||||||||||| |||| ||||||| ||||||  || |||| ||| |||    
T  15522670 gtcatctcacttatatgttgttcaaaatgtaatcttccatccaatatataactttaactcacacttaatacattaatatctcttaatcaagtgtgaaact 15522769  T
Q  159 ctttg 163  Q
    |||||    
T  15522770 ctttg 15522774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 489
Target Start/End: Complemental strand, 15630276 - 15630188
Alignment:
Q  401 tttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||||||||  ||| |||||||||||||| ||||| || |   ||||| ||||||| | |||| ||||||||||| ||||| ||||||    
T  15630276 tttaagtgacttttgctacatcacaatattatctcctttaagtttgacggaattctagcacgtgcttggcacgggtttccatgctagtt 15630188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 24044286 - 24044210
Alignment:
Q  415 gatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagttat 491  Q
    ||||||| | |||||| ||||| || |  |||||||||||||||||||||  |||||| ||| ||||||||| ||||    
T  24044286 gatacattataatattatctcctttaactatgacgaaattctaacccgtgcatggcacaggtatccatactaattat 24044210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 38291848 - 38291748
Alignment:
Q  65 tcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgt 164  Q
    |||||||||||||||||||  || ||| ||||||| ||||||  | ||||| || || ||  ||||| || || ||||| |||||| |||||||||||||    
T  38291848 tcacttatatgtttctcaatgtccactcttgcatcaaatgtggaactttaagtcgcaattgccacatcaatatatctcccttaagtgtgagactctttgt 38291749  T
Q  165 g 165  Q
    |    
T  38291748 g 38291748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 45528309 - 45528233
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaa 102  Q
    ||||||||||||||||||| ||||  |||||  ||||||||| ||||||||| ||||| || ||||  |||||||||    
T  45528309 ttcacccaaaatcttaagacattaggtatatttgtcatctcatttatatgttgctcaatatatactcgtgcatccaa 45528233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 313
Target Start/End: Original strand, 38015878 - 38016182
Alignment:
Q  9 tgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgt 107  Q
    |||||| |||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  38015878 tgagattgacatcacaacttcacccaaaatcttaagtcattagatatatgagtcatctcacttatatgttgctcaacatctactattgcattcaatgtgt 38015977  T
Q  108 tattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaat 207  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||  ||||||||  | ||| |||||||    
T  38015978 tattttaactcacacttgacacattaacatctctccatcaagtatgagact-tttgtgtccacgatccaccaccacgaaccacttccgttccacaaaaat 38016076  T
Q  208 gttgaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatg 307  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||| | |||||||    
T  38016077 gttgaagcggatatgatatcgccattgggacttatggggagccagcacttgtgtgaatcgatatattgcagaaagagcaatcacacaagtaataatgatg 38016176  T
Q  308 ttacat 313  Q
    ||||||    
T  38016177 ttacat 38016182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 195 - 414
Target Start/End: Original strand, 33014007 - 33014227
Alignment:
Q  195 gctccccaaaaatgttgaagcggatatgatatcaccattggaacttatg-gggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacac 293  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||   ||||| |||||||||||||| ||||| ||||||||||| | ||| |||||    
T  33014007 gctccccaaaaatgttgaagcgtatatgatatcaccattgggacttacatgggagacaacacttgtgtgattcgacacattgcagaaaaaacaaccacac 33014106  T
Q  294 aagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaat 393  Q
    |||||||||||||||  |||||||||  ||||||||||||||| ||||||||| || ||||||| ||||||||||||| ||||||||||| |||||||||    
T  33014107 aagtgagaatgatgtcgcattttcatctaaaattttaagactttagtatatgagttttttttcatttatttgttcttcgacctccaatattttatccaat 33014206  T
Q  394 gttgatatttaagtgacactt 414  Q
    | ||| |||||||||||||||    
T  33014207 gatgagatttaagtgacactt 33014227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 256 - 463
Target Start/End: Original strand, 42312245 - 42312452
Alignment:
Q  256 ttgtgtgaatcgacgcattgcagaaagagcaatcaca--caagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttattt 353  Q
    |||| ||||||||| ||||  ||||||||||||||||  ||||||||||||||||  ||| ||||| |||||||||||| |||||||||||||    |||    
T  42312245 ttgtttgaatcgacacattatagaaagagcaatcacacacaagtgagaatgatgtcgcatcttcatccaaaattttaaggcttaagtatatga--acttt 42312342  T
Q  354 ttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaat 453  Q
    |||||||||||||| || | | |||| | | | |||| ||||||  | |||| |||||||||||||||||||||||| ||||||   || ||||||||||    
T  42312343 ttcacttatttgttgtttatcttccactctttcatccgatgttgggacttaactgacacttgatacatcacaatattttctccaccaaatatgacgaaat 42312442  T
Q  454 tctaacccgt 463  Q
    ||||||||||    
T  42312443 tctaacccgt 42312452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 33014320 - 33014399
Alignment:
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||| |||||| || ||||||||||||| ||||||    
T  33014320 acacttgatacatcacaatatcctctccattaaatatgacgaaattctagcccgtgcttagcacgggtgtccaaactagt 33014399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 9012698 - 9012813
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||| | |||| |||||||||||||| ||||||||||||| ||| || || ||||  ||||||||| ||| || ||||||||| || |||||||    
T  9012698 attatgtataagggtcagctcacttatatgttgctcaacatctactcttgaattcattgtgaaattttaactaacacttgacacattaatatgtctccat 9012797  T
Q  146 taagtatgagactctt 161  Q
    ||||| ||||||||||    
T  9012798 taagtgtgagactctt 9012813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 42313482 - 42313347
Alignment:
Q  300 gaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgat 399  Q
    ||||||||  |||| ||||| |||| ||||||| ||||||||||||  ||  |||||||| || |||| |||| |||||| | | ||||||||| |||      
T  42313482 gaatgatgccacatcttcatccaaatttttaaggcttaagtatatgtgtt--ttttcactaatgtgttgttcatcctccactcttttatccaatattggg 42313385  T
Q  400 atttaagtgacacttgatacatcacaatattctctcca 437  Q
     ||||| |||||||||||||||||||||||||||||||    
T  42313384 ctttaactgacacttgatacatcacaatattctctcca 42313347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 8128411 - 8128553
Alignment:
Q  45 aattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctcca 144  Q
    |||||| ||||||  ||||  |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| |||||     
T  8128411 aattatgtatatggatcataacacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccc 8128508  T
Q  145 ttaagtatgagactctttgtgtctgcgatccaccaccaaaaacca 189  Q
    | ||||| |||||||| ||  | || |||| ||||||| ||||||    
T  8128509 tcaagtacgagactctctgcatatgagatctaccaccataaacca 8128553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 9025042 - 9024953
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||  ||||| | | | ||||||||||||| || ||||||||||||||||    
T  9025042 tatatgagtcatctcacttatatgttattcaaaatctactcttctatccactatataattttaactcacacttgacacattaacatctct 9024953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 20966214 - 20966097
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    |||| ||||||||||||| | | ||||||||   |||||||||| ||||||||||||||||  | ||||| ||||| || |||||||||||||| ||  |    
T  20966214 attagatatatgagtcatataatttatatgtcgttcaacatctattattgcatccaatgtggaactttaaatcacacttgacacattaacatctttctct 20966115  T
Q  146 taagtatgagactctttg 163  Q
    ||| ||||||||| ||||    
T  20966114 taaatatgagactttttg 20966097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 4062231 - 4062139
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| ||||||||    
T  4062231 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactct 4062139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 19910595 - 19910759
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    ||||||| ||||||||||||||||||  |||| ||||||| |||||| |||||||  ||||| || |||||||  | ||||||||||| |  || ||||     
T  19910595 tatatgactcatctcacttatatgttgttcaatatctactcttgcatacaatgtggaattttgacacacatttgtcgcattaacatctttatatcaagtg 19910694  T
Q  152 tgagactct---ttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaa 213  Q
    | |||||||   |  |||||| ||||||| || |||||||||| ||||| ||| | |||||||||    
T  19910695 ttagactctctatgttgtctgtgatccactactaaaaaccactcatgcttccccacaatgttgaa 19910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 11770399 - 11770464
Alignment:
Q  95 gcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||||||||||||| | ||||| |||||||  |||||||||| ||||||| ||||||||||||||||    
T  11770399 gcatccaatgtgtaactttaaatcacattcgacacattaacttctctcccttaagtatgagactct 11770464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 32259413 - 32259502
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||| ||||||| ||||||||| |||||| ||||| |  |  ||||||||||| ||  ||||| ||||||||||||||||||||||||    
T  32259413 atttaactgacactagatacatcataatattgtctccctcaactatgacgaaattttagtccgtgcttggcacgggtgtccatactagtt 32259502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 488
Target Start/End: Original strand, 38016182 - 38016303
Alignment:
Q  367 tcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtt 466  Q
    |||| |||||| ||||| |||||||||||| | |||||| ||||| ||  |||||||||||||||| ||| | ||  ||||| |||||||| || ||  |    
T  38016182 tcttaaacctctaatattttatccaatgttaagatttaattgacatttattacatcacaatattctatccttcgaggatgacaaaattctagcctgtaat 38016281  T
Q  467 tggcacgggtgtccatactagt 488  Q
    | |||||| |||||||||||||    
T  38016282 tagcacggatgtccatactagt 38016303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 9048658 - 9048607
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctttg 163  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  9048658 tttaactcacatataacacattaacatctctcc-ttaagtatgagattctttg 9048607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 488
Target Start/End: Complemental strand, 9022829 - 9022785
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  9022829 atgacgaaattctaatccgtgcttggcacgagtgtccatactagt 9022785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 491
Target Start/End: Original strand, 42955306 - 42955443
Alignment:
Q  351 tttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaata-ttctctccattgaaaatgacg 449  Q
    |||||| |||||||||| ||||||||| | | | |||| ||||||||| ||||||    ||||||||||||||||||| || |||   |  || | || |    
T  42955306 tttttcgcttatttgttgttcaacctctacttttttattcaatgttgaaatttaa----cacttgatacatcacaatatttttctttctcaaatacgatg 42955401  T
Q  450 aaattctaacccgtgtttggcacgggtgtccatactagttat 491  Q
    |||||||| | |||| |||||||| |||||||||||||||||    
T  42955402 aaattctagctcgtgcttggcacgagtgtccatactagttat 42955443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 7332935 - 7333027
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    |||||||||||| ||||| ||||||| || |||||||||||  |||| ||||| || || |||||||||||| ||||| | ||||| || |||||    
T  7332935 cacttatatgttactcaatatctactcttacatccaatgtg--atttgaactcgcacttgacacattaacatttctccctcaagtacgaaactct 7333027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 433
Target Start/End: Complemental strand, 10175771 - 10175613
Alignment:
Q  277 agaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttattttt--cacttatttgttcttcaac 374  Q
    ||||||||||| ||||||| | |||||||| | |||| | ||| | | ||||||||  | |||||||||| || |||||  |||||||||||| ||||||    
T  10175771 agaaagagcaaacacacaaataagaatgatatcacatatacatcctatattttaaggttaaagtatatgagtttttttttccacttatttgttgttcaac 10175672  T
Q  375 ctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctc 433  Q
    ||| | | | ||||  |||||||   ||||| |||||||| |||| | |||||||||||    
T  10175671 ctctactcttttatttaatgttggactttaactgacacttaatactttacaatattctc 10175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 19318902 - 19319006
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatg 153  Q
    |||| |||||||||||||||| | |||||  |||||||  ||||| |||||||  | ||||||||| || | ||||| ||||||||||  ||||||| ||    
T  19318902 tatgtgtcatctcacttatatttatctcactatctactcgtgcattcaatgtggaaatttaactcatatatgacacaataacatctct--attaagtgtg 19318999  T
Q  154 agactct 160  Q
    |||||||    
T  19319000 agactct 19319006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 29865859 - 29865942
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||| ||||  |||||||||||| ||||||||| ||| || |||||||||||  | |||||||| || || ||||||||||||    
T  29865859 tatatgaatcataacacttatatgttactcaacatcaactcttacatccaatgtg--actttaactcgcacttgacacattaacat 29865942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 7333206 - 7333247
Alignment:
Q  447 acgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    ||||||||||| | |||||||||||||||| |||||||||||    
T  7333206 acgaaattctagctcgtgtttggcacgggtttccatactagt 7333247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 27594557 - 27594666
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||| || || |||||||||||||  |||||||||| |||||||| |||||||  | ||||| ||||| || |||| ||||| ||| ||  | ||||    
T  27594557 atatatgggttatatcacttatatgttgttcaacatctattattgcattcaatgtggaactttaaatcacacttgacacgttaacctctttctgtcaagt 27594656  T
Q  151 atgagactct 160  Q
    |||| |||||    
T  27594657 atgacactct 27594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 33013940 - 33013997
Alignment:
Q  100 caatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagac 157  Q
    ||||||||||||||||| |||| || |||||||| |||||||| ||||| || |||||    
T  33013940 caatgtgttattttaacccacacttgacacattagcatctctcaattaaatacgagac 33013997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 27 - 288
Target Start/End: Complemental strand, 1599805 - 1599542
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacattta 125  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||     
T  1599805 ttcacccaaaatcttaagacattagatacatgagtcatctcacttatatgtttctcaacatctactattgcattcaatgtgttattttaactcacacttg 1599706  T
Q  126 acacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcggatatgata 225  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||||| ||||||||||| | |||||||  |||||| ||||||||||||||  ||||||||    
T  1599705 acacattaacatctctctattaagcatgagactctctgtatctgctatccaccaccacataccacttccgctcccaaaaaatgttgaagcatatatgata 1599606  T
Q  226 tcaccattggaacttat-ggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaat 288  Q
    ||||| |||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  1599605 tcacctttgggacttatgggggagccaatacttgtgtgaatcgacacattgcagaaagagcaat 1599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 91 - 303
Target Start/End: Complemental strand, 26894961 - 26894748
Alignment:
Q  91 tattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccac 190  Q
    ||||||||||||||||||||||||| ||||| || | | ||||||||||||||||||||||||||||| |  |||||||| |||||||||||  ||||||    
T  26894961 tattgcatccaatgtgttattttaaatcacacttgatatattaacatctctccattaagtatgagactatccgtgtctgcaatccaccaccatgaaccac 26894862  T
Q  191 ttatgctccccaaaaatgttgaagcggatatgatatcaccattggaacttatgggg-agccaacacttgtgtgaatcgacgcattgcagaaagagcaatc 289  Q
    ||   |||||| |||||||||||| |||||| ||||||  ||||| |||||||||| |||||||| ||||||||||  || |||||||||||||| ||||    
T  26894861 ttccactcccctaaaatgttgaagtggatattatatcattattgggacttatggggtagccaacagttgtgtgaatacacacattgcagaaagagaaatc 26894762  T
Q  290 acacaagtgagaat 303  Q
    |||||| |||||||    
T  26894761 acacaaatgagaat 26894748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 488
Target Start/End: Complemental strand, 1594684 - 1594479
Alignment:
Q  283 agcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaata 382  Q
    ||||||||||| ||||| ||||||||||||| ||||| |||||||| ||| ||||||||||||| ||  |||||||||||||  | ||||||||||||||    
T  1594684 agcaatcacacgagtgataatgatgttacatcttcatccaaaatttaaagtcttaagtatatgagtttattttcacttatttactattcaacctccaata 1594585  T
Q  383 tcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccat 482  Q
    | ||||||||| |||| ||||||   ||| || |||| | |||||||||||||| || |  |||||||||||||| || ||| |||||||| ||||||||    
T  1594584 ttttatccaatattgagatttaacatacatttaatactttacaatattctctcccttaaggatgacgaaattctagcctgtgcttggcacgagtgtccat 1594485  T
Q  483 actagt 488  Q
     |||||    
T  1594484 gctagt 1594479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 364 - 485
Target Start/End: Complemental strand, 26894728 - 26894607
Alignment:
Q  364 tgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgt 463  Q
    |||||||||||||||||||| ||||||||||||||  ||||| | ||| ||| |||||||||||||||||||| |  || |||||||||||||| |  ||    
T  26894728 tgttcttcaacctccaatattttatccaatgttgaggtttaactaacagttgttacatcacaatattctctccttcaaagatgacgaaattctagcttgt 26894629  T
Q  464 gtttggcacgggtgtccatact 485  Q
    | ||| ||||||||||||||||    
T  26894628 gattgacacgggtgtccatact 26894607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 7428469 - 7428605
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||||||    
T  7428469 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgacacattaacatctctccat 7428567  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaa 183  Q
    ||||| | ||  ||||||||| ||   |||||||||||    
T  7428568 taagtgtcaggatctttgtgtttgtagtccaccaccaa 7428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 16279074 - 16279200
Alignment:
Q  56 tgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgag 155  Q
    |||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||| ||| || |||||||||||||| |||||||||| | ||    
T  16279074 tgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaacttacacttgacacattaacatctgtccattaagtgtcag 16279172  T
Q  156 actctttgtgtctgcgatccaccaccaa 183  Q
      ||||||||| ||   |||||||||||    
T  16279173 gatctttgtgtttgtagtccaccaccaa 16279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 31737205 - 31737288
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaac 135  Q
    ||||||| |||| |||||| ||||||  |||||||||||| ||||||||||||||  ||||||||||||| || ||||||||||    
T  31737205 tatatgaatcatatcacttgtatgttgttcaacatctactcttgcatccaatgtgaaattttaactcacaattgacacattaac 31737288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 23410088 - 23410180
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| ||||||||    
T  23410088 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactct 23410180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 11554334 - 11554492
Alignment:
Q  7 aatgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    |||||||| |||| |||| ||| |||||||| ||||||| ||||  || ||| ||||||||||| |||||||  | |||| |||||  ||||||||||||    
T  11554334 aatgagattgacaccacattttgacccaaaaccttaagacattaggtacatgggtcatctcactaatatgttgtttaacaactactcctgcatccaatgt 11554433  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgt 164  Q
       |  ||||||||||  | |||||||||||||||||  |||| | |||||||||||||    
T  11554434 agaaggttaactcacacatgacacattaacatctctcttttaactttgagactctttgt 11554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 436
Target Start/End: Complemental strand, 20873715 - 20873525
Alignment:
Q  245 ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatat 344  Q
    |||||||||| || |||| |||||| ||||| |||| || ||| || ||||||| ||||| |  ||||| ||||| | |||||||||  |||| |||       
T  20873715 ggagccaacatttatgtggatcgacacattggagaaggaacaaccaaacaagtgcgaatgctactacatcttcatcccaaattttaatgcttacgtac-- 20873618  T
Q  345 gatttatttttc-acttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctcc 436  Q
    ||||| |||||| |||||||||||  |||||||||| ||| |||||||||||| |  ||||| |||  ||  |||||||| ||||||||||||    
T  20873617 gatttttttttccacttatttgttaatcaacctccactattttatccaatgtttagttttaactgatgctcaatacatcataatattctctcc 20873525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 432
Target Start/End: Complemental strand, 24174883 - 24174699
Alignment:
Q  245 ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatat 344  Q
    |||||||||||   |||| || ||| ||||| |||||||||| ||| |||||| ||||||   | |||| ||||| ||| ||||||||||||||||||||    
T  24174883 ggagccaacaccgatgtggattgacacattggagaaagagcagtcatacaagtaagaatggaatcacatcttcatccaacattttaagacttaagtatat 24174784  T
Q  345 gatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattct 432  Q
     |    |||||| |||||||||| |||||| | |  | |  ||| ||||||||   ||||| | ||||||||||||||||||||||||    
T  24174783 aa---gtttttctcttatttgttgttcaacttacgcttttatattcaatgttggactttaattcacacttgatacatcacaatattct 24174699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 20872556 - 20872435
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||| | ||||||||||||| || |||||||||||  | ||||||||||| || |||| ||||||| ||||| | ||||| |||||||| ||      
T  20872556 cacttatatgctactcaacatctactcttacatccaatgtg--actttaactcacacttgacacgttaacatttctccctcaagtacgagactctctgca 20872459  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  20872458 tatgagatctaccaccataaacca 20872435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 21984263 - 21984208
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  21984263 atatatgagtcatatcacttatatattgttcaacatttactattgcatccaatgtg 21984208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 28365813 - 28365691
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    |||||||||||| ||||||||||  || ||||||||||| |||| |   ||||||||| ||| || |||||||||||||| |||||||||| | ||  ||    
T  28365813 tcatctcacttaaatgtttctcat-atatactattgcatacaatataaaattttaacttacacttgacacattaacatctgtccattaagtgtcaggatc 28365715  T
Q  160 tttgtgtctgcgatccaccaccaa 183  Q
    ||||||| ||   |||||||||||    
T  28365714 tttgtgtttgtagtccaccaccaa 28365691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 4031618 - 4031519
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    ||||| ||||||||||||| ||||||||| ||| ||  ||| ||||||  |  |||||||||  || |||||||||||||||| | ||||||||||||||    
T  4031618 gtcatatcacttatatgttgctcaacatccactcttatatctaatgtggaaccttaactcac--ttgacacattaacatctcttccttaagtatgagact 4031521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 4852944 - 4852786
Alignment:
Q  7 aatgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    |||||||| |||| |||| ||| | |||||||||||||| |||   || ||| ||||||||||| |||||||  | |||| |||||  ||||||||||||    
T  4852944 aatgagattgacaccacattttgatccaaaatcttaagacattcggtacatgggtcatctcactaatatgttgtttaacaactactcctgcatccaatgt 4852845  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgt 164  Q
       |  ||||||||||  | |||||||||||||||||  |||| | |||||||||||||    
T  4852844 agaaggttaactcacacatgacacattaacatctctcttttaactttgagactctttgt 4852786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 15878925 - 15878847
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||||| |||||||||  |||| ||||||| || |||||||||| | |  ||||||||||||| ||||||||||||    
T  15878925 gtcatctcaattatatgttgttcaaaatctactcttccatccaatgtataacgttaactcacatttgacacattaacat 15878847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 473
Target Start/End: Complemental strand, 4029692 - 4029627
Alignment:
Q  408 gacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacg 473  Q
    |||||||||||||||| || ||||||||  || || ||||| ||||||||||||||||||| ||||    
T  4029692 gacacttgatacatcataacattctctcatttaaatatgactaaattctaacccgtgtttgacacg 4029627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 19660312 - 19660429
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    |||| ||||||||| ||| ||| |||||||||  |||||| ||||| ||| || ||||| |  | ||||||||||| |||||||| || ||||  ||  |    
T  19660312 attagatatatgaggcatatcatttatatgttgttcaacaactactcttggattcaatgaggaactttaactcacacttaacacactatcatccatctct 19660411  T
Q  146 taagtatgagactctttg 163  Q
    ||||||||||||||||||    
T  19660412 taagtatgagactctttg 19660429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 454
Target Start/End: Complemental strand, 2976526 - 2976423
Alignment:
Q  351 tttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacga 450  Q
    ||||||||||||||||| ||| || |||| | | | ||||||||||||  ||||| | ||| |||||||| ||||||||||| ||  || || |||||||    
T  2976526 tttttcacttatttgttgttccacttccattctttcatccaatgttgaactttaattaacatttgatacaacacaatattctttctcttaaatatgacga 2976427  T
Q  451 aatt 454  Q
    ||||    
T  2976426 aatt 2976423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 24175141 - 24175010
Alignment:
Q  16 gacatcacaatttcacccaaaatcttaagaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaa 115  Q
    |||||||||  |||||| ||| ||||||  ||||  |||| | ||||||||||||||||||| |||||||| || |||||||| || |     |||||||    
T  24175141 gacatcacatcttcaccaaaagtcttaaacattaggtataagggtcatctcacttatatgttgctcaacatatattattgcatacattactgaattttaa 24175042  T
Q  116 ctcacatttaacacattaacatctctccatta 147  Q
     ||||| || ||||||||||| || |||||||    
T  24175041 ttcacacttgacacattaacaactatccatta 24175010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 29214273 - 29214412
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    ||||||||||||||||||| ||||||  ||||||  | || || ||| |||||||  ||||||||| | | ||||| | ||||||| ||| ||||||||     
T  29214273 tatatgagtcatctcacttgtatgttgttcaacaattgctttttcatacaatgtggaattttaacttaaacttaactcgttaacatatcttcattaagtg 29214372  T
Q  152 tgagactctttgtgtctgcgatccaccaccaaaaaccact 191  Q
    |||  ||||  ||||  | ||||||||||||| |||||||    
T  29214373 tgatgctctccgtgtgggtgatccaccaccaagaaccact 29214412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 33350291 - 33350346
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| ||||||||||| |||||||    
T  33350291 atatatgagtcatatcacttatatattgttcaacatttactattgcattcaatgtg 33350346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 498
Target Start/End: Original strand, 34516738 - 34516987
Alignment:
Q  245 ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaat-tttaagacttaagtata 343  Q
    ||||||||||||  |||| |||||| ||||| |||||| |||| |||||| |||| |||||   |||| || |||  ||||  |||||| |||||||||     
T  34516738 ggagccaacactaatgtggatcgacacattggagaaagggcaaccacaca-gtgaaaatgagactacaattacatcaaaaaaatttaaggcttaagtat- 34516835  T
Q  344 tgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaa 443  Q
     ||||| |||||||||  |||| | |||||||| || | | | ||| ||||||||  ||||| ||||  ||| |||||||||||||  ||||| || ||     
T  34516836 -gattt-tttttcactcttttgatgttcaacctgcactctttcatctaatgttgaattttaactgacttttgctacatcacaatatcatctcccttaaat 34516933  T
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagttattactaat 498  Q
     ||||  ||||||| |||||| ||||||| ||||||||| |||| ||||||||||    
T  34516934 ttgacagaattctagcccgtgcttggcacaggtgtccatgctag-tattactaat 34516987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 4791625 - 4791671
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    |||| ||||||||||||| |||||||| |||||| ||||||||||||    
T  4791625 tcatatcacttatatgttgctcaacatttactatcgcatccaatgtg 4791671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 9452849 - 9452907
Alignment:
Q  45 aattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaat 103  Q
    ||||| ||||||| ||||| ||||||||||||| ||||||||| ||  |||||||||||    
T  9452849 aattagatatatgggtcatatcacttatatgttactcaacatcgacgcttgcatccaat 9452907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 20874231 - 20874193
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaag 149  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  20874231 tttaactcacatttgacacattaacatctctcccttaag 20874193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 24398031 - 24397965
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctacta 92  Q
    |||||||||||||||| || |||| |||||| |||||||||| ||||||||| ||||| || |||||    
T  24398031 ttcacccaaaatcttacgacattagatatattagtcatctcatttatatgttgctcaatatatacta 24397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 490
Target Start/End: Original strand, 26597899 - 26597980
Alignment:
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    ||||||||||||| | |||||| |||||||  |||||||||||||| | |   ||| ||| ||||| |||||||||||||||    
T  26597899 acacttgatacatgataatattttctccataaaaaatgacgaaattgttatatgtgcttgacacggatgtccatactagtta 26597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 9449601 - 9449689
Alignment:
Q  53 atatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||||| |||||||||||||||| |||| || ||||  | ||||||||||   ||  ||||||||| || |||| |||||||||||    
T  9449601 atatgagtcttctcacttatatgtttttcaaaatatactcatccatccaatgtagaatggtaactcacacttgacacgttaacatctct 9449689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 14211616 - 14211704
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| | ||||| ||||||||| |||||| ||||| |  |  |||| |||||||||   |||| |||||||||||||||||||||||    
T  14211616 atttaactaacactagatacatcataatattgtctccctcaactatgatgaaattctagttcgtgcttggcacgggtgtccatactagt 14211704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 15600249 - 15600377
Alignment:
Q  16 gacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttatttta 114  Q
    |||||||||  |||| || ||||||||||| ||||  |||||  ||||| ||| |  |||||| ||||||||| ||| |||| | ||||||   | |||     
T  15600249 gacatcacatattcagcctaaatcttaagacattaggtatattggtcatatcattattatgttgctcaacatcaactgttgctttcaatgtcgaactttt 15600348  T
Q  115 actcacatttaacacattaacatctctcc 143  Q
    |||||||||||||||||||| ||||||||    
T  15600349 actcacatttaacacattaatatctctcc 15600377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 16707389 - 16707317
Alignment:
Q  67 acttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatct 139  Q
    |||||||||||| ||||||| |||| || | |||||||||  | || ||||||| ||| ||||||||||||||    
T  16707389 acttatatgtttatcaacatttactcttacttccaatgtgaaacttcaactcacgtttgacacattaacatct 16707317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 26597582 - 26597684
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||||||||| |||||| ||||||||| || | ||| |||| |||| | ||||||   |||||| |||||| || ||| ||||||||||||||||    
T  26597582 attatgtatatgagtaatctcatttatatgtt-ctga-catatacttttgcttacaatgtagaattttagctcacacttgacatattaacatctctccat 26597679  T
Q  146 taagt 150  Q
    |||||    
T  26597680 taagt 26597684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 490
Target Start/End: Complemental strand, 28365494 - 28365450
Alignment:
Q  446 gacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    ||||| |||||| |||||| ||||||||||||||||| |||||||    
T  28365494 gacgacattctagcccgtgcttggcacgggtgtccatgctagtta 28365450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 4e-70; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 199 - 488
Target Start/End: Original strand, 50332063 - 50332353
Alignment:
Q  199 cccaaaaatgttgaagcggatatgatatcaccattggaacttatgggg-agccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagt 297  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||| |||    
T  50332063 cccaaaaatgttgaagcagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgtcacattgcagaaagagcaatcacacgagt 50332162  T
Q  298 gagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttg 397  Q
    || ||||||||||||| ||||| |||||||| |||  |||||||||||| ||  |||||||||||||  ||||||||||| ||||| ||||||||| |||    
T  50332163 gataatgatgttacatcttcatccaaaatttaaagtattaagtatatgagtttattttcacttatttactcttcaacctctaatattttatccaatattg 50332262  T
Q  398 atatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    | ||||||   ||| |  |||||| |||||||||||||| || |  |||||||||||||| ||| || |||||||| |||||||| |||||    
T  50332263 agatttaacatacattcaatacattacaatattctctcccttaaggatgacgaaattctagcccatgcttggcacgagtgtccatcctagt 50332353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 95 - 394
Target Start/End: Complemental strand, 36096164 - 36095859
Alignment:
Q  95 gcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttat 194  Q
    |||| |||||| |||||||||| |||| || ||||||||  ||||||| ||||| || || |||||| ||||| ||||||||||||||  || |||||      
T  36096164 gcattcaatgtattattttaacccacacttgacacattacaatctctcaattaaatacgatactcttcgtgtccgcgatccaccaccacgaagcacttcc 36096065  T
Q  195 gctccccaaaaatgttgaagcggatatgatatcaccattggaactta-tggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacac 293  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||  |||||  |||||||||||||| ||||| ||||||||||| | ||| ||||     
T  36096064 gctccccaaaaatgttgaagcgtatatgatatcaccattgggacatacgggggatacaacacttgtgtgattcgacacattgcagaaaaaacaaccacaa 36095965  T
Q  294 aagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttat-----ttttcacttatttgttcttcaacctccaatatcttat 388  Q
    | |||||||||||||  ||| ||| | |||||||||||| ||| |||||  | ||| |     |||||||||||||||| ||| ||||||||||| ||||    
T  36095964 aggtgagaatgatgtcgcatcttcttccaaaattttaaggctttagtatgagtttttttttccttttcacttatttgtttttcgacctccaatattttat 36095865  T
Q  389 ccaatg 394  Q
    ||||||    
T  36095864 ccaatg 36095859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 50331915 - 50332056
Alignment:
Q  20 tcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactc 118  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50331915 tcacaacttcacccaaaatcttaagacattagatacatgagtcatctcacttatatgtttctcaacatctactattgcattcaatgtgttattttaactc 50332014  T
Q  119 acatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||| || ||||||||||||||||| |||||| |||| |||||    
T  50332015 acacttgacacattaacatctctctattaagcatgaaactct 50332056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 169 - 394
Target Start/End: Original strand, 12746101 - 12746326
Alignment:
Q  169 gcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaagcggatatgatatcaccattggaacttat-ggggagccaacacttgtgtgaatcg 267  Q
    |||||||||||||| ||| || ||  |||| ||||||||||||||||| |||||||||||||||||| | |||  |||||| |||||||||||||| |||    
T  12746101 gcgatccaccaccacaaagcatttccgctctccaaaaatgttgaagcgtatatgatatcaccattgggaattacaggggagacaacacttgtgtgattcg 12746200  T
Q  268 acgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgtt 367  Q
    |  ||||||||| | ||||||||||||||||||||||||||  ||| ||||| ||||||||||||  ||  |||||||| || |||||||||||||||||    
T  12746201 atacattgcagaga-agcaatcacacaagtgagaatgatgtcgcatcttcatccaaaattttaaggttttggtatatgagttttttttcacttatttgtt 12746299  T
Q  368 cttcaacctccaatatcttatccaatg 394  Q
    |||| | ||||||||| ||||| ||||    
T  12746300 cttcgatctccaatattttatcgaatg 12746326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 20934981 - 20935084
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||| |   |||||||||||||  | ||||||||||||||||||||    
T  20934981 attatgtatatgagtcatctcacttaaatgtttctca-catctactattgcatacaatataaaattttaactcacacctgacacattaacatctctccat 20935079  T
Q  146 taagt 150  Q
    |||||    
T  20935080 taagt 20935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 32976455 - 32976595
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||||||||||||||||||| ||||||||||  |||||||||||||| |||| |   ||||||||||||| || | ||||||||||||||||||    
T  32976455 attatgtatatgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacttgatacattaacatctctccat 32976553  T
Q  146 taagtatgagactctttgtgtctgcgatccaccaccaaaaac 187  Q
    ||||| | ||  ||||||||| ||   ||||||||| |||||    
T  32976554 taagtgttaggatctttgtgtttgtagtccaccacccaaaac 32976595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 401 - 489
Target Start/End: Original strand, 12746425 - 12746513
Alignment:
Q  401 tttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||| |||||||| |||||||||||||||||||||||| || |||| ||||||||| ||| || ||| |||||||||||| |||||||    
T  12746425 tttaactgacacttaatacatcacaatattctctccattaaatatgatgaaattctagcccatgcttgacacgggtgtccaaactagtt 12746513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42400367 - 42400470
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| |||| |   |||||||||||||  | ||||||||||||||||||||    
T  42400367 attatgtatgtgagtcatctcacttaaatgtttctcat-atctactattgcatacaatataaaattttaactcacacgtgacacattaacatctctccat 42400465  T
Q  146 taagt 150  Q
    |||||    
T  42400466 taagt 42400470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 432046 - 431968
Alignment:
Q  71 atatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaag 149  Q
    |||||||||||||||| |||| |||||||||||||   ||||||||||||| || ||||||||| ||||||||||||||    
T  432046 atatgtttctcaacatatactcttgcatccaatgtcgaattttaactcacaattgacacattaatatctctccattaag 431968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 17764223 - 17764120
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||||||||| |||||||||||||||| |||| ||| |||| | || | |||||||  ||||||||||||| ||  |||||||||||||||||||    
T  17764223 attatgtatatgagtaatctcacttatatgttgctca-catatactctggcttacaatgtggaattttaactcacacttgtcacattaacatctctccat 17764125  T
Q  146 taagt 150  Q
    |||||    
T  17764124 taagt 17764120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 19065543 - 19065440
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||||||||| |||||||||||||||| |||| ||| |||| | || | |||||||  ||||||||||||| ||  |||||||||||||||||||    
T  19065543 attatgtatatgagtaatctcacttatatgttgctca-catatactctggcttacaatgtggaattttaactcacacttgtcacattaacatctctccat 19065445  T
Q  146 taagt 150  Q
    |||||    
T  19065444 taagt 19065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 10976771 - 10976849
Alignment:
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||| |||||  |||||| |||||||||||||||||    
T  10976771 acttgaaacatcacaatattctctccctcaaatatgacgaaattctagcccgtacttggcatgggtgtccatactagtt 10976849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 488
Target Start/End: Complemental strand, 17763916 - 17763830
Alignment:
Q  402 ttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||| ||||||||||||| |||||| ||||| | | |  || |||||||||||||| |||||| |||||||||||||||||||||||    
T  17763916 ttaactgacacttgatacgtcacaacattctttgcctcaaatatgacgaaattctagcccgtgcttggcacgggtgtccatactagt 17763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 488
Target Start/End: Complemental strand, 19065236 - 19065150
Alignment:
Q  402 ttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||| ||||||||||||| |||||| ||||| | | |  || |||||||||||||| |||||| |||||||||||||||||||||||    
T  19065236 ttaactgacacttgatacgtcacaacattctttgcctcaaatatgacgaaattctagcccgtgcttggcacgggtgtccatactagt 19065150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 486
Target Start/End: Complemental strand, 50239399 - 50239313
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    |||||| ||||||| ||||||||| |||||| ||||| |  |  |||||||||||||| |||||| |||||||||||||||||||||    
T  50239399 atttaactgacactagatacatcataatattgtctccctcaaccatgacgaaattctagcccgtgcttggcacgggtgtccatacta 50239313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 6088375 - 6088420
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6088375 atgacgaaattctaacccgtgcttggcacgggtgtccatactagtt 6088420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 40056614 - 40056505
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||| || || |||||||||||||  |||||||||| ||||||||||||||||  | ||||| ||||| || |||| ||||||||| ||  | ||||    
T  40056614 atatatgggttatatcacttatatgttgttcaacatctattattgcatccaatgtggaactttaaatcacacttgacacgttaacatctttctctcaagt 40056515  T
Q  151 atgagactct 160  Q
    ||||||||||    
T  40056514 atgagactct 40056505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 14044378 - 14044266
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||| ||||| ||||||| |||||  ||||||| |||||||||||||||| ||  | ||||| ||||| || |||||||||||||| ||  | ||||    
T  14044378 atatatgggtcatatcacttaaatgttgttcaacatttactattgcatccaatatggaactttaaatcacacttgacacattaacatctttctctcaagt 14044279  T
Q  151 atgagactctttg 163  Q
    |||||||| ||||    
T  14044278 atgagactttttg 14044266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 19817404 - 19817525
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  19817404 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 19817501  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  19817502 tatgagatctaccaccataaacca 19817525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 32970448 - 32970556
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||| |||||||||||||||| ||| ||| |||||||| ||||||| ||||||  | ||| |||||||||| ||| |||||||| ||||| | || |     
T  32970448 tatatgggtcatctcacttatatatttttcagcatctactcttgcatctaatgtgaaactttcactcacatttgacatattaacatatctccctgaaatg 32970547  T
Q  152 tgagactct 160  Q
    |||||||||    
T  32970548 tgagactct 32970556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 367
Target Start/End: Original strand, 6088027 - 6088149
Alignment:
Q  242 tggggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagta 341  Q
    |||||||| ||||||  |||| |||||| ||||| |||||||||| |||  ||||||||||| || | |||| ||||| ||||||||||||  |||||||    
T  6088027 tggggagcaaacactgatgtggatcgacacattggagaaagagcactcattcaagtgagaattatatcacatcttcatccaaaattttaaggtttaagta 6088126  T
Q  342 tatgatttatttttcacttatttgtt 367  Q
    ||| |   ||||||| ||||||||||    
T  6088127 tataa---atttttcccttatttgtt 6088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 20779644 - 20779566
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    |||||||||||||||||||  |||| ||||||| || |||||| ||| | || ||||||||||||| ||||||||||||    
T  20779644 gtcatctcacttatatgttgttcaaaatctactcttccatccagtgtataatgttaactcacatttgacacattaacat 20779566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 34849788 - 34849896
Alignment:
Q  34 aaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacatt 132  Q
    |||||||||||| ||||| || || ||| ||||||||||||| || |||| ||||||| |||| || |||||||  | ||||| |||||| | |||||||    
T  34849788 aaaatcttaagacattatgtacataagttatctcacttatattttcctcaccatctaccattgaattcaatgtgaaactttaattcacatatgacacatt 34849887  T
Q  133 aacatctct 141  Q
    |||||||||    
T  34849888 aacatctct 34849896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 25225317 - 25225428
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagta 151  Q
    |||||| |||||| ||||| ||| ||| ||| ||||||||||||||| |||||||  | |||||||||||  | ||| ||||||||| |||| ||||||     
T  25225317 tatatgggtcatcacacttgtatctttttcaccatctactattgcattcaatgtggaactttaactcacaaatgacatattaacatccctcccttaagtg 25225416  T
Q  152 tgagactctttg 163  Q
    | ||||| ||||    
T  25225417 ttagactttttg 25225428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 30171172 - 30171227
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||||||||||||||    
T  30171172 atatatgagtcatatcacttatatattgttcaacatttactattgcatccaatgtg 30171227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 37837526 - 37837609
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctc 142  Q
    ||||||||| ||||||||||||||| ||||||| || ||||||| || | | ||||| |||||  |||||||||||||| ||||    
T  37837526 gtcatctcatttatatgtttctcaatatctactttttcatccaacgtataagtttaaatcacacataacacattaacatatctc 37837609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 10020227 - 10020165
Alignment:
Q  29 cacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctac 90  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||||  |||| ||||||    
T  10020227 cacccaaaatcttaagatattaagtatatgagtcatctcacttatatgttgttcaaaatctac 10020165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 489
Target Start/End: Original strand, 12125841 - 12125979
Alignment:
Q  349 tatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgac 448  Q
    ||||||| ||||||||||| |||||||| || | | ||||||||||||    ||||||||||| ||| | ||||  |||  |||||  ||| |  |||||    
T  12125841 tattttttacttatttgttgttcaacctgcactcttttatccaatgttcgactttaagtgacatttgttccatctgaattatctct--attaagtatgac 12125938  T
Q  449 gaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||| || | | |||||||||||||||||||||||||||    
T  12125939 gaaattttagctcatgtttggcacgggtgtccatactagtt 12125979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 6435963 - 6435915
Alignment:
Q  100 caatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    |||||||  ||||||||| ||||| ||||||||||||||||||||||||    
T  6435963 caatgtgaaattttaacttacattgaacacattaacatctctccattaa 6435915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 9263565 - 9263468
Alignment:
Q  62 atctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctt 161  Q
    ||||||||||||||||| |||| ||||||  ||||||||||| ||  | ||| | ||||| || |||| |||||||||||||  ||||| ||||||||||    
T  9263565 atctcacttatatgtttttcaagatctac--ttgcatccaatttggaactttgagtcacaattgacactttaacatctctcccataagtgtgagactctt 9263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 14249239 - 14249371
Alignment:
Q  28 tcacccaaaatcttaa-gaattatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaa 126  Q
    |||||||||| ||||| | ||||| |||||  |||||||||||||||||||| |||  ||||||  ||||||| | ||||  | ||||| ||||| || |    
T  14249239 tcacccaaaaccttaaagtattatgtatattggtcatctcacttatatgtttttcataatctac--ttgcatctattgtggaactttaagtcacaattga 14249336  T
Q  127 cacattaacatctctccattaagtatgagactctt 161  Q
    ||| ||||||| |||||  ||||| ||||||||||    
T  14249337 cactttaacatatctcccataagtgtgagactctt 14249371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 20788534 - 20788479
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtg 106  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||| ||||||||||    
T  20788534 atatatgagtcatatcacttatatattgttcaacatttactattgaatccaatgtg 20788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 21320476 - 21320393
Alignment:
Q  130 attaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaatgttgaa 213  Q
    |||||||||| |||||||||| |   ||||| | ||| |  ||||||||||||||||||||| ||||||||| | |||||||||    
T  21320476 attaacatctatccattaagtgttgaactctctctgtgtatgatccaccaccaaaaaccactcatgctcccccacaatgttgaa 21320393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 161
Target Start/End: Complemental strand, 6437644 - 6437545
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||| ||  | ||| | ||||| || |||| ||||||| |||||  ||||| ||||||||    
T  6437644 tcatctcacttatatgtttttcaagatctac--ttgcatccaatttggaactttgagtcacaattgacactttaacatatctcccataagtgtgagactc 6437547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 11655434 - 11655484
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaagtatgagactctt 161  Q
    |||||||||||||| | || |||||||||||||||||||| | ||||||||    
T  11655434 tttaactcacatttgatacgttaacatctctccattaagtgtcagactctt 11655484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 40417910 - 40417868
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactatt 94  Q
    |||||| | |||||||||||||||||||||| |||||||||||    
T  40417910 tatatgggccatctcacttatatgtttctcaccatctactatt 40417868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 9261526 - 9261465
Alignment:
Q  87 ctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaa 148  Q
    ||||| |||||| |||||||  ||||||| | ||| | ||||||||||||||||||||||||    
T  9261526 ctactcttgcatacaatgtgaaattttaagttacactgaacacattaacatctctccattaa 9261465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 12125579 - 12125648
Alignment:
Q  78 tctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccatta 147  Q
    |||||||||||||| || |||  ||||||  |||||||||| ||||| |||||||| ||||||| |||||    
T  12125579 tctcaacatctacttttacataaaatgtgaaattttaactcgcatttgacacattatcatctctgcatta 12125648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 6087837 - 6087905
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcac 120  Q
    ||||||||| ||  |||||||||||| ||||||||||| | |||||| || ||||  ||||||||||||    
T  6087837 tatatgagttatgccacttatatgttgctcaacatctaatcttgcatacattgtggaattttaactcac 6087905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 6435650 - 6435578
Alignment:
Q  417 tacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||||||||||| ||||| || |   ||||| ||||||| |||||| ||||||||||| ||||| ||||||    
T  6435650 tacatcacaatattatctcctttaagtttgacggaattctagcccgtgcttggcacgggtttccatgctagtt 6435578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 12744020 - 12744060
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatc 99  Q
    |||||||||||||||||||  ||||||||||||||| ||||    
T  12744020 gtcatctcacttatatgttattcaacatctactattccatc 12744060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 21868040 - 21868108
Alignment:
Q  63 tctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacat 131  Q
    |||||| |||||||| |||||| || ||| || |||||||||||  | |||||||||||||| ||||||    
T  21868040 tctcacctatatgttgctcaacctcgactttttcatccaatgtgggactttaactcacatttgacacat 21868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 37836713 - 37836813
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    |||||||| |||||||||| ||||||| |||| |||| ||| | |||  | ||||||| |||  | |||||||||||| ||||| |||||| | ||||||    
T  37836713 tcatctcatttatatgtttttcaacatttacttttgcttccgacgtggaactttaacttacaagtgacacattaacatatctcccttaagtgtcagactc 37836812  T
Q  160 t 160  Q
    |    
T  37836813 t 37836813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 39183153 - 39183101
Alignment:
Q  51 atatatgagtcatctcacttatatgtttctcaacatctactattgcatccaat 103  Q
    ||||||| || || |||||||||||||  |||||||||| |||||||||||||    
T  39183153 atatatgggttatatcacttatatgttgttcaacatctattattgcatccaat 39183101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 266
Target Start/End: Original strand, 50164 - 50422
Alignment:
Q  9 tgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgt 107  Q
    |||||| |||||||||| |||||||||| |||| ||| |||  |||| ||||| |||||  |||||||||  || |||||||||||||||| ||| ||||    
T  50164 tgagattgacatcacaacttcacccaaattcttgagacatttgatatttgagttatctcggttatatgttgttctacatctactattgcattcaacgtgt 50263  T
Q  108 tattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccacttatgctccccaaaaat 207  Q
    |||||||||| ||| || ||| |||||  ||||||||||||||| |||||||| | |||| |||||||||||| |  |||||||| ||||||| |||||     
T  50264 tattttaactgacacttgacatattaaattctctccattaagtacgagactctctatgtccgcgatccaccactacgaaccacttctgctcccaaaaaac 50363  T
Q  208 gttgaagcggatatgatatcaccattggaacttatggggagccaacacttgtgtgaatc 266  Q
    |||||||||||||||||||||  ||| | |||| | | |||||||||||||||||||||    
T  50364 gttgaagcggatatgatatcattattaggacttttcgagagccaacacttgtgtgaatc 50422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 304 - 429
Target Start/End: Original strand, 50440 - 50558
Alignment:
Q  304 gatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatattt 403  Q
    |||||||||| ||||| |||||||||||||||       |||| || |||||||||||||| ||||  |||||||||||| ||||||||||| || ||||    
T  50440 gatgttacatcttcatccaaaattttaagact-------atgagttttttttcacttatttattctctaacctccaatattttatccaatgtggagattt 50532  T
Q  404 aagtgacacttgatacatcacaatat 429  Q
    || | |||||| |||||||| |||||    
T  50533 aactcacacttaatacatcataatat 50558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 85; Significance: 3e-40; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 14480 - 14332
Alignment:
Q  195 gctccccaaaaatgttgaagcggatatgatatcaccattggaacttatgg-ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacac 293  Q
    ||||| |||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||| || ||||| |||||| ||||||||||    
T  14480 gctcctcaaaaatgttgaagcggatatgatatcaccattaagacttatggaggagccaacacttgtgtgaatcaacacattgaagaaagggcaatcacac 14381  T
Q  294 aagtgagaatgatgttacattttcattcaaaattttaagacttaagtat 342  Q
    |||||||| | ||||||||| ||||| ||||||||||||  ||||||||    
T  14380 aagtgagactaatgttacatcttcatccaaaattttaaggtttaagtat 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 14647 - 14532
Alignment:
Q  7 aatgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| |||| |||||||||||| |||||||||  ||||||||||||||||||| ||||||    
T  14647 aatgagattgacatcacaacttcacccaaaatcttaagacattaaatatgtgagtcatctcatttatatgttgttcaacatctactattgcattcaatgt 14548  T
Q  106 gttattttaactcaca 121  Q
    ||||||||||||||||    
T  14547 gttattttaactcaca 14532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 14307 - 14235
Alignment:
Q  414 tgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    ||||||||||||||||||||||| | || | ||||||||||||| ||||| ||||||||||||||||||||||    
T  14307 tgatacatcacaatattctctccctcgatactgacgaaattctagcccgtatttggcacgggtgtccatacta 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 488
Target Start/End: Original strand, 15721438 - 15721643
Alignment:
Q  283 agcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaata 382  Q
    ||||||||||| ||||| ||||||||||||| ||||| |||||||| ||| ||||||||||||| ||  |||||||||||||  | ||||||||||||||    
T  15721438 agcaatcacacgagtgataatgatgttacatcttcatccaaaatttaaagtcttaagtatatgagtttattttcacttatttactattcaacctccaata 15721537  T
Q  383 tcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccat 482  Q
    | ||||||||| |||| ||||||   ||| || |||| | |||||||||||||| || |  |||||||||||||| || ||| |||||||| ||||||||    
T  15721538 ttttatccaatattgagatttaacatacatttaatactttacaatattctctcccttaaggatgacgaaattctagcctgtgcttggcacgagtgtccat 15721637  T
Q  483 actagt 488  Q
     |||||    
T  15721638 gctagt 15721643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 43989784 - 43989681
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| ||||||| |||||||||||| |||||||||| ||||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||| ||    
T  43989784 attatgtatatgaatcatctcacttaaatgtttctca-catctactattgcatacaatataaaattttaactcacacttgacacattaacatctctcaat 43989686  T
Q  146 taagt 150  Q
    |||||    
T  43989685 taagt 43989681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 17510234 - 17510369
Alignment:
Q  78 tctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccac 177  Q
    |||||||||||||| || |||  ||||||  | ||||||||| |||| ||||||||||||||||||| ||||| | |||||||||||| ||| |||| ||    
T  17510234 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctccagtaagtgtcagactctttgtgcctgtgatcgac 17510333  T
Q  178 caccaaaaaccacttatgctccccaaaaatgttgaa 213  Q
    |||||| |||||||    |||||| |||||||||||    
T  17510334 caccaagaaccactcccactcccctaaaatgttgaa 17510369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 17542980 - 17542845
Alignment:
Q  78 tctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccac 177  Q
    |||||||||||||| || |||  ||||||  | ||||||||| |||| ||||||||||||||||||| ||||| | |||||||||||| ||| |||| ||    
T  17542980 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctccagtaagtgtcagactctttgtgcctgtgatcgac 17542881  T
Q  178 caccaaaaaccacttatgctccccaaaaatgttgaa 213  Q
    |||||| |||||||    |||||| |||||||||||    
T  17542880 caccaagaaccactcccactcccctaaaatgttgaa 17542845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 45406784 - 45406686
Alignment:
Q  62 atctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||||| || |||||||||||||||||| || || |||| |||||   ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  45406784 atctccctcatatgtttctcaacatctcctcttacatcaaatgtcaaattttaactcacaattgacacattaacatttctccattaagtatgagactct 45406686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 17474750 - 17474863
Alignment:
Q  78 tctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccac 177  Q
    |||||||||||||| || |||  ||||||  | ||||||||| |||| ||||||||||||||||||| ||||| | |||||||||||| ||| |||| ||    
T  17474750 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctccagtaagtgtcagactctttgtgcctgtgatcgac 17474849  T
Q  178 caccaaaaaccact 191  Q
    |||||| |||||||    
T  17474850 caccaagaaccact 17474863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 17578464 - 17578351
Alignment:
Q  78 tctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccac 177  Q
    |||||||||||||| || |||  ||||||  | ||||||||| |||| ||||||||||||||||||| ||||| | |||||||||||| ||| |||| ||    
T  17578464 tctcaacatctactcttacataaaatgtgaaactttaactcaaatttgacacattaacatctctccagtaagtgtcagactctttgtgcctgtgatcgac 17578365  T
Q  178 caccaaaaaccact 191  Q
    |||||| |||||||    
T  17578364 caccaagaaccact 17578351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 38788964 - 38789060
Alignment:
Q  85 atctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccacc 181  Q
    ||||||| |||||| |||||||  ||||||||| ||| |||||||||||||||||||||||||||| | |||||||  |||| || |||||||||||    
T  38788964 atctactcttgcatacaatgtgaaattttaacttacacttaacacattaacatctctccattaagtgtcagactctccgtgtttgtgatccaccacc 38789060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 491
Target Start/End: Original strand, 6679453 - 6679652
Alignment:
Q  291 cacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttc-acttatttgttcttcaacctccaatatcttatc 389  Q
    ||||||||| ||||||  ||||| ||||| | ||||| |||  |||||| ||  ||||| |||||| |||||||||||  |||||||||  | | |||||    
T  6679453 cacaagtgaaaatgatactacatcttcatcccaaattgtaatgcttaagcat--gatttttttttccacttatttgttaatcaacctccgctgttttatc 6679550  T
Q  390 caatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
     |||||| |  ||||| | || ||| |||||||| |||||||||||| |  | ||||| ||||||||| |||||||||||||| | ||||||||||||||    
T  6679551 aaatgtttagctttaactaactcttaatacatcataatattctctccctcaacaatgatgaaattctagcccgtgtttggcacagatgtccatactagtt 6679650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 4120006 - 4120143
Alignment:
Q  64 ctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttg 163  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||  ||||||||| ||| || |||| |||  ||||||||||||||| ||||| | ||||    
T  4120006 ctcacttatatgttgctcaacatccacttttgaatccaatgtgaaattttaactaacacttgacacgttagtatctctccattaagtgtgagagtgtttg 4120105  T
Q  164 tgtctgcgatccaccaccaaaaaccacttatgctcccc 201  Q
     || || | || ||||| || |||||||  ||||||||    
T  4120106 cgtttgtggtctaccactaagaaccactcttgctcccc 4120143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 29502481 - 29502556
Alignment:
Q  413 ttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||||||||||||||  | ||| || |  |||||||||||||| |||||| |||||||||||||||||||||||    
T  29502481 ttgatacatcacaatatcatttcccttaagtatgacgaaattctagcccgtgcttggcacgggtgtccatactagt 29502556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 42080874 - 42080952
Alignment:
Q  71 atatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaag 149  Q
    ||||||||||||||||||||| ||||||| |||||   ||||||||||||   | ||||||||| ||||||||||||||    
T  42080874 atatgtttctcaacatctactcttgcatctaatgtcaaattttaactcacgactgacacattaatatctctccattaag 42080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 29912663 - 29912542
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | ||||||||||| || || ||||||||| ||||  | ||||| |||||||| ||      
T  29912663 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcacacttgacgcattaacatttctctctcaagtacgagactctctgca 29912566  T
Q  166 tctgcgatccaccaccaaaaacca 189  Q
    | || |||| ||||||| ||||||    
T  29912565 tatgagatctaccaccataaacca 29912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 20181420 - 20181327
Alignment:
Q  67 acttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    |||| ||||||| |||| ||||||| ||| ||||||| |   | ||||| |||||||| |  ||||||||||||||| ||||||||||||||||    
T  20181420 acttgtatgtttttcaatatctactcttgaatccaatatagaactttaaatcacatttgatgcattaacatctctcctttaagtatgagactct 20181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 22529008 - 22528920
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaa 134  Q
    |||| ||||| | ||||| ||| |||||||||||||||||| |||| |||||| ||||||   |||||||||||||  ||||| |||||    
T  22529008 attaaatatacgggtcatatcagttatatgtttctcaacatttactcttgcatacaatgtaaaattttaactcacacataacatattaa 22528920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 17475013 - 17475059
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||||||    
T  17475013 atgacaaaattctagcccgtgcttggcacgggtgtccatgctagtta 17475059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 17578201 - 17578155
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||||||    
T  17578201 atgacaaaattctagcccgtgcttggcacgggtgtccatgctagtta 17578155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 2929518 - 2929446
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacat 131  Q
    |||||||||| ||||||||||| |||||||||| || |||| ||||||  | ||||| ||||| || ||||||    
T  2929518 gtcatctcacatatatgtttcttaacatctacttttacatctaatgtggaactttaagtcacaattgacacat 2929446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 4120340 - 4120420
Alignment:
Q  408 gacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| ||||||||| |||||| |||| ||  || || | |||||| ||||||||| ||| |||||||||||||| ||||    
T  4120340 gacactcgatacatcaaaatattttctcgatcaaatataatgaaattgtaacccgtggttgacacgggtgtccatattagt 4120420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 13301133 - 13301173
Alignment:
Q  47 ttatatatatgagtcatctcacttatatgtttctcaacatc 87  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  13301133 ttatatatatgagacatctcatttatatgttgctcaacatc 13301173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 42080566 - 42080646
Alignment:
Q  407 tgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactag 487  Q
    ||||||||||||||||| || ||||||||| |  || ||||| ||||| || |||||  ||||||||||| ||| ||||||    
T  42080566 tgacacttgatacatcataacattctctccttcaaatatgactaaattatagcccgtacttggcacgggtatccttactag 42080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 460
Target Start/End: Complemental strand, 2162 - 1988
Alignment:
Q  282 gagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatatgatttatttttcacttatttgttcttcaacctccaat 381  Q
    ||||||||||| ||||||||||||| | | |||||||| |||||||||||   ||||| |||| | ||   ||||||||| ||||| ||||||||||| |    
T  2162 gagcaatcacataagtgagaatgatatcatattttcatccaaaattttaaagtttaagcatataagtt---tttcacttaattgttgttcaacctccatt 2066  T
Q  382 atcttatccaatgttgatatttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacc 460  Q
     | | |||||||||||   ||||| |||||||||||| ||||| ||||||||| | | ||||||||| |||||||||||    
T  2065 ctttaatccaatgttgcactttaactgacacttgataaatcacgatattctcttc-tcgaaaatgactaaattctaacc 1988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 2376 - 2278
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactatt---gcatccaatgtgttattttaactcacatttaacacattaacatctctccattaag 149  Q
    ||||| |||||||| || |||||| ||||||||||| || |   ||||||||||||  ||||||||| ||| || |||||||||||| ||| |||||||    
T  2376 tatgaatcatctcatttgtatgttgctcaacatctattactcctgcatccaatgtggaattttaacttacacttgacacattaacatatcttcattaag 2278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 29168 - 29270
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactc 159  Q
    ||||||||||||||||||  | |||||||||| ||||||||||||||  | |||||||||||||| | |||||||||| ||||| |||| | ||||||||    
T  29168 tcatctcacttatatgttgtttaacatctacttttgcatccaatgtggaactttaactcacatttgatacattaacatatctcccttaactgtgagactc 29267  T
Q  160 ttt 162  Q
    |||    
T  29268 ttt 29270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1750 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold1750
Description:

Target: scaffold1750; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 268 - 371
Alignment:
Q  46 attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccat 145  Q
    ||||| |||| |||||||||| |||| |||||||||| ||||||||||||||| |||| |   ||||||||||||| ||  |||||||||||||||||||    
T  268 attatgtatacgagtcatctcgcttaaatgtttctca-catctactattgcatacaatataaaattttaactcacacttgccacattaacatctctccat 366  T
Q  146 taagt 150  Q
    |||||    
T  367 taagt 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1750; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 349
Target Start/End: Original strand, 542 - 576
Alignment:
Q  315 ttcattcaaaattttaagacttaagtatatgattt 349  Q
    ||||| |||||||||||||||||||||||||||||    
T  542 ttcatccaaaattttaagacttaagtatatgattt 576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1345 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold1345
Description:

Target: scaffold1345; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 1942 - 1847
Alignment:
Q  54 tatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagt 150  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||| |||| |   ||||||||||||| || ||||||||||||||||| |||||||    
T  1942 tatgagttatctcacttaaatgtttctca-catctactattgcatacaatataaaattttaactcacacttgacacattaacatctctcaattaagt 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 34561 - 34470
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagttat 491  Q
    |||||| ||||||| ||||||||| |||||| |||||||  |  |||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  34561 atttaactgacactagatacatcataatattgtctccatcaactatgacgaaattctagcccgtgcttgacacgggtgtccatactagttat 34470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 37130 - 37041
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||  ||||| | |   ||||||||||||| || ||||||||||||||||    
T  37130 tatatgaatcatctcacttatatgttattcaaaatctactcttctatccactatagaattttaactcacacttgacacattaacatctct 37041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 423
Target Start/End: Original strand, 22749 - 22929
Alignment:
Q  245 ggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtatat 344  Q
    |||||||||| | |||||||||||  ||||| |||||||| ||||| ||||||||||| ||| |||  | ||||| |||||| ||||    |||||||||    
T  22749 ggagccaacagtggtgtgaatcgatacattggagaaagagtaatcaaacaagtgagaaagattttatgtcttcatccaaaatgttaaagtgtaagtatat 22848  T
Q  345 ga--tttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgacacttgatacatca 423  Q
    ||  ||| |||| ||||||| || | ||||| ||||| | | ||||||||| || | |||||| |||||||||||||||||    
T  22849 gagtttttttttccacttatgtgatgttcaatctccactcttttatccaatatttaaatttaattgacacttgatacatca 22929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 6424 - 6528
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagact 158  Q
    |||||||||||||||||||  |||||||||| | ||||||||||| ||  | |||||||||||||| | ||||||||| |||||| |||| | ||||| |    
T  6424 gtcatctcacttatatgttgttcaacatctatttttgcatccaatatggaactttaactcacatttgatacattaacacctctcccttaattgtgagaat 6523  T
Q  159 ctttg 163  Q
    |||||    
T  6524 ctttg 6528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 2998 - 3086
Alignment:
Q  400 atttaagtgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactagt 488  Q
    |||||| ||||||| ||||||||| |||||| ||| | |  |   ||||||||||||| |||||| |||||||||||||||||||||||    
T  2998 atttaactgacactagatacatcataatattgtctacctcaactttgacgaaattctagcccgtgcttggcacgggtgtccatactagt 3086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 7590 - 7668
Alignment:
Q  59 gtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacat 137  Q
    ||||||| ||||||||||| ||||| ||||||| || |||||||||| | |  ||||||| ||||| ||||||||||||    
T  7590 gtcatctaacttatatgttgctcaaaatctactcttccatccaatgtataacgttaactcgcatttgacacattaacat 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 2331 - 2372
Alignment:
Q  60 tcatctcacttatatgtttctcaacatctactattgcatcca 101  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  2331 tcatctcacttatatgtttcttaacatttacttttgcatcca 2372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 31023 - 31152
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||||||||||| || |||||||||||  | |||||||| || || |||||||||||| ||||| | ||||| |||||||| ||      
T  31023 cacttatatgttactcaacatctactcttacatccaatgtg--actttaactcgcacttgacacattaacatttctccctcaagtacgagactctctgca 31120  T
Q  166 tctgcgatccaccaccaaaaaccacttatgct 197  Q
    | || |||| ||||||| |||||| |||||||    
T  31121 tatgagatctaccaccataaaccaattatgct 31152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 96868 - 96974
Alignment:
Q  244 gggagccaacacttgtgtgaatcgacgcattgcagaaagagcaatcacacaagtgagaatgatgttacattttcattcaaaattttaagacttaagtata 343  Q
    ||||||||||| | ||||| ||| || ||||  | |||||| || |||| |||| |||||||| |  ||| ||||| |||||||||||| ||||||||||    
T  96868 gggagccaacattggtgtggatcaacacattttaaaaagagtaaccacataagttagaatgatat--catcttcatccaaaattttaagccttaagtata 96965  T
Q  344 tgatttatt 352  Q
    ||| |||||    
T  96966 tgagttatt 96974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 5233 - 5143
Alignment:
Q  69 ttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||||||||| |||| |||||||| |||||| |||||||  ||||||||| ||| |||| ||||||||||||||||||||||| | |||||||    
T  5233 ttatatgttgctca-catctactcttgcatacaatgtgaaattttaacttacacttaaaacattaacatctctccattaagtgtcagactct 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 30954 - 30815
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacattta 125  Q
    |||||||||||||||| || |||| |||||| |||||||||| ||||||||| ||||| || |||||| ||| | |||||   |  ||||||||||  |     
T  30954 ttcacccaaaatcttatgacattagatatattagtcatctcatttatatgttgctcaatatatactatcgcacctaatgt-agaagttaactcacacatg 30856  T
Q  126 acacattaacatctctccattaagtatgagactctttgtgt 166  Q
    ||||||||| |||||||  ||||||||| ||||||||||||    
T  30855 acacattaatatctctctcttaagtatgggactctttgtgt 30815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 32798 - 32745
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgt 105  Q
    ||||| ||||||||||||||||||||||| ||||| | || ||||||| |||||    
T  32798 tatatcagtcatctcacttatatgtttcttaacatatgctcttgcatctaatgt 32745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 31107 - 30999
Alignment:
Q  71 atatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgtctgc 170  Q
    ||||||||||||||||||||| ||||||| |||||   ||||||||||||   | ||| ||||| |||||||||||||    ||||||||| |||||||     
T  31107 atatgtttctcaacatctactcttgcatctaatgtcaaattttaactcacgactgacaaattaatatctctccattaa----gagactcttcgtgtctgt 31012  T
Q  171 gatccaccaccaa 183  Q
    |||||| ||||||    
T  31011 gatccatcaccaa 30999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 30710 - 30662
Alignment:
Q  442 aaatgacgaaattctaacccgtgtttggcacgggtgtccatactagtta 490  Q
    ||||||||||||| || ||| || ||||||||||| |||||||||||||    
T  30710 aaatgacgaaattttagcccatgcttggcacgggtttccatactagtta 30662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 11559 - 11710
Alignment:
Q  11 agatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgtta 109  Q
    |||| ||||||||  ||||| |||||||||||| | |  || |||||| ||||||||||||||||||| ||||| || |||| |||||| || ||    |    
T  11559 agattgacatcactttttcatccaaaatcttaaaacaacatgtatatgggtcatctcacttatatgttgctcaatatttactcttgcatacactg---aa 11655  T
Q  110 ttttaactcacatttaacacattaacatctctccattaagtatgagactctttgtgt 166  Q
    |||||||||||  || ||||||||||||||||||| ||||| | |||||||| ||||    
T  11656 ttttaactcac--tttacacattaacatctctccactaagtgtaagactcttcgtgt 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 11962 - 12007
Alignment:
Q  444 atgacgaaattctaacccgtgtttggcacgggtgtccatactagtt 489  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||    
T  11962 atgacgaatttctagcccgtgcttggcacgggtgtccatactagtt 12007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 19862 - 19991
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactctttgtg 165  Q
    |||||||||||| ||||| ||||||| || |||||||||||  | ||||| || || || |||||||||||| ||||| | ||||| |||||||| ||      
T  19862 cacttatatgttactcaatatctactcttacatccaatgtg--actttaattcgcacttgacacattaacatttctccctcaagtacgagactctctgca 19959  T
Q  166 tctgcgatccaccaccaaaaaccacttatgct 197  Q
    | || |||| ||||||| |||||| |||||||    
T  19960 tatgagatctaccaccataaaccaattatgct 19991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 40667 - 40575
Alignment:
Q  66 cacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctctccattaagtatgagactct 160  Q
    ||||||||| || ||||||||||| | || |||||||||||  | |||||||||||||| |||| ||||||| ||||| | ||||| ||||||||    
T  40667 cacttatatcttactcaacatctattcttacatccaatgtg--actttaactcacatttgacacgttaacatttctccctcaagtacgagactct 40575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 12687 - 12572
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacattta 125  Q
    ||||||||||||||||||  || |  |||| | |||||||||||||||||||  |||| || ||||||| |||||||||| | | ||||||||| | ||     
T  12687 ttcacccaaaatcttaaggtatcaggtatacgtgtcatctcacttatatgttgttcaaaatatactattccatccaatgtataactttaactcaaacttc 12588  T
Q  126 acacattaacatctct 141  Q
    | ||||||||||||||    
T  12587 atacattaacatctct 12572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 129359 - 129430
Alignment:
Q  411 acttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccat 482  Q
    |||||||||||||||||||||||||  |  || ||||||||||| || || ||| |||||||||||||||||    
T  129359 acttgatacatcacaatattctctcgctcaaatatgacgaaattttagccagtgcttggcacgggtgtccat 129430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 47123 - 47288
Alignment:
Q  27 ttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacattta 125  Q
    |||||||||| |||||||| || |  ||| || |||||||||||||||||||  ||||||||||||||| ||| ||| |||  | ||||||||||| ||     
T  47123 ttcacccaaagtcttaagacatgaggtatgtgtgtcatctcacttatatgttgttcaacatctactattccatacaacgtgaaactttaactcacacttg 47222  T
Q  126 acacattaacatctctccattaagtatgagactctttgtgtctgcgatccaccaccaaaaaccact 191  Q
    | |||  ||||| |||| || || | | ||||||| |||||  | |||||||||| || |||||||    
T  47223 atacaacaacatttctctatcaaatgttagactctctgtgtaagtgatccaccacaaataaccact 47288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 652 - 510
Alignment:
Q  9 tgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgc--atccaatgt 105  Q
    |||||| ||||||||  ||||||||||| || ||||| ||||  ||||||| | ||||| || ||||||||||||||||||||| ||||  |||||||||    
T  652 tgagatcgacatcactttttcacccaaagtcctaagacattaggtatatga-taatctccctcatatgtttctcaacatctactcttgcatatccaatgt 554  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaag 149  Q
       | ||| ||| |||  | ||||||||||||||||| ||||||    
T  553 tgaacttttacttacaactgacacattaacatctctctattaag 510  T

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Target: scaffold1293 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1419 - 1561
Alignment:
Q  9 tgagatggacatcacaatttcacccaaaatcttaaga-attatatatatgagtcatctcacttatatgtttctcaacatctactattgc--atccaatgt 105  Q
    |||||| ||||||||  ||||||||||| || ||||| ||||  ||||||| | ||||| || ||||||||||||||||||||| ||||  |||||||||    
T  1419 tgagatcgacatcactttttcacccaaagtcctaagacattaggtatatga-taatctccctcatatgtttctcaacatctactcttgcatatccaatgt 1517  T
Q  106 gttattttaactcacatttaacacattaacatctctccattaag 149  Q
       | ||| ||| |||  | ||||||||||||||||| ||||||    
T  1518 tgaacttttacttacaactgacacattaacatctctctattaag 1561  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 476
Target Start/End: Complemental strand, 17396 - 17329
Alignment:
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggt 476  Q
    ||||||||||||||| |||||||  ||  |  || |||||||||||||| ||||||||||||||||||    
T  17396 acacttgatacatcaaaatattcagtctctcaaatatgacgaaattctagcccgtgtttggcacgggt 17329  T

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Target: scaffold1737 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1737
Description:

Target: scaffold1737; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 562 - 524
Alignment:
Q  111 tttaactcacatttaacacattaacatctctccattaag 149  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  562 tttaactcacatttgacacattaacatctctcccttaag 524  T

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Target: scaffold1590 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 486
Target Start/End: Complemental strand, 1525 - 1450
Alignment:
Q  409 acacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatacta 486  Q
    |||||||||||||||||||||||||||  |  || ||||||||||| ||  | ||| ||| |||||||||||||||||    
T  1525 acacttgatacatcacaatattctctc--tcaaatatgacgaaattttagtctgtgcttgtcacgggtgtccatacta 1450  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 18449 - 18538
Alignment:
Q  52 tatatgagtcatctcacttatatgtttctcaacatctactattgcatccaatgtgttattttaactcacatttaacacattaacatctct 141  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||  ||||| | |   ||||||||||||| || ||  ||||||||||||    
T  18449 tatatgagtcatctcacttatatgttattcaaaatctactcttctatccactatagaattttaactcacacttgactaattaacatctct 18538  T

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Target: scaffold0377 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 15400 - 15480
Alignment:
Q  407 tgacacttgatacatcacaatattctctccattgaaaatgacgaaattctaacccgtgtttggcacgggtgtccatactag 487  Q
    ||||||||||||||||| || ||||||||| |  || ||||| ||||| || |||||  ||||||||||| ||| ||||||    
T  15400 tgacacttgatacatcataacattctctccttcaaatatgactaaattatagcccgtacttggcacgggtatccttactag 15480  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 126334 - 126294
Alignment:
Q  315 ttcattcaaaattttaagacttaagtatatgatttattttt 355  Q
    ||||| |||||||||||| ||||||||||||| ||||||||    
T  126334 ttcatccaaaattttaagccttaagtatatgagttattttt 126294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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