View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9119_low_61 (Length: 237)
Name: NF9119_low_61
Description: NF9119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9119_low_61 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29562198 - 29561976
Alignment:
| Q |
1 |
tttaataatcccaccattaataaaaaattatgaacgtgaaatgatttgaatttcttagtgtatcttttaagagattaattttaatgcagtgttattataa |
100 |
Q |
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| T |
29562198 |
tttaataatcccaccattaataaaaaattatgaaggtgaattgatttgaatttcttagtgtatcttttaagagattaattttaatgcagtgttattataa |
29562099 |
T |
|
| Q |
101 |
atttacactgacaatctcatgacctaagatgacactgacaatcttggctaaccaaattaaaagaacgaattcaattcttaaatcaaattgtatattgaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29562098 |
atttacactgacaatctcatgacctaagatgacactgacaatcttggctaaccgaattaaaagaacgaattcaattcttaaatcaaattgtatattgaca |
29561999 |
T |
|
| Q |
201 |
aatcatgcaggaaaatttgtcat |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
29561998 |
aatcatgcaggaaaatttgtcat |
29561976 |
T |
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