View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9121_high_5 (Length: 283)
Name: NF9121_high_5
Description: NF9121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9121_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 19347019 - 19347295
Alignment:
| Q |
1 |
cctaagtgctatggaaactgctacatcacgaacatagttattcatttggatcttcccactcgtgttacatttatccaacaaacaagaagcctgcagagat |
100 |
Q |
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| T |
19347019 |
cctaagtgctatggaaactgctacatcacgaacatagttattcatttggatcttcccactcgtgttacatttatccaacaaacaagaagcctgcagagat |
19347118 |
T |
|
| Q |
101 |
aggattatactgtgaagtgtgtttcttgcatgatacacagtatttatatccttgaaaatgttcaaacccatagcaactttcagtaagtactctgtatcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19347119 |
aggattatactgtgaagtgtgtttcttgcatgatacacagtatttatatctttgaaaatgttcaaacccatagcaactttcagtaagtactctgtatcaa |
19347218 |
T |
|
| Q |
201 |
tatcttgtagtgtagaagaaagcaagaagatatccttcattgcttgattcactaacaagttgtaactcaacaccaaa |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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| T |
19347219 |
tatcttgtagtgtagaagaaagcaagaagatatccttcattgcttgactcactaacaagttgtaactcaactccaaa |
19347295 |
T |
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