View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9121_low_23 (Length: 227)
Name: NF9121_low_23
Description: NF9121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9121_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 10726948 - 10727137
Alignment:
| Q |
19 |
gaggtaggtaccttgtgttgagtcggaaaagaccgacataggaacgaaggctttggacatatccatatcaaaacatcttggtgtatctccaacttgattt |
118 |
Q |
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| T |
10726948 |
gaggtaggtaccttgtgttgagtcggaaaagaccgacataggaacgaaggctttggacatatccatatcaaaacatcttggtgtatctccaacttgattt |
10727047 |
T |
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| Q |
119 |
ccacccaactccattgtaaactgaccagtttattatttcactaaacaatcaaacttttttaaaataacaaaacgaaaattacaggggaaa |
208 |
Q |
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| T |
10727048 |
ccacccaactccattgtaaactgaccagtttattatttcactaaacaatcaaacttttttaaaataacaaaacgaaaattacaggggaaa |
10727137 |
T |
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