View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9121_low_5 (Length: 415)

Name: NF9121_low_5
Description: NF9121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9121_low_5
NF9121_low_5
[»] chr4 (15 HSPs)
chr4 (11-399)||(7756169-7756557)
chr4 (251-399)||(7749932-7750079)
chr4 (32-98)||(43980639-43980705)
chr4 (38-98)||(29180331-29180391)
chr4 (39-98)||(50768586-50768645)
chr4 (36-98)||(38187645-38187707)
chr4 (54-98)||(9798010-9798054)
chr4 (38-98)||(10591422-10591482)
chr4 (38-98)||(30776403-30776463)
chr4 (54-98)||(49902168-49902212)
chr4 (39-98)||(29899856-29899915)
chr4 (39-98)||(39969909-39969968)
chr4 (54-98)||(3043102-3043146)
chr4 (54-98)||(28681800-28681844)
chr4 (39-98)||(30777628-30777688)
[»] chr5 (8 HSPs)
chr5 (24-98)||(35462658-35462732)
chr5 (39-98)||(31316755-31316814)
chr5 (39-98)||(8145967-8146026)
chr5 (50-96)||(2002100-2002146)
chr5 (38-95)||(31690573-31690630)
chr5 (54-98)||(8541533-8541577)
chr5 (54-98)||(20915005-20915049)
chr5 (38-98)||(25962401-25962461)
[»] chr1 (21 HSPs)
chr1 (36-98)||(36037381-36037443)
chr1 (37-98)||(40935568-40935629)
chr1 (38-98)||(40960430-40960490)
chr1 (38-98)||(23873783-23873843)
chr1 (54-98)||(44875323-44875367)
chr1 (38-98)||(46949465-46949525)
chr1 (39-98)||(26907048-26907107)
chr1 (34-82)||(6848262-6848310)
chr1 (54-98)||(35941985-35942029)
chr1 (35-94)||(18852371-18852430)
chr1 (35-98)||(25990892-25990955)
chr1 (36-98)||(39026199-39026262)
chr1 (39-93)||(31970266-31970320)
chr1 (37-98)||(28017800-28017861)
chr1 (54-95)||(35189349-35189390)
chr1 (54-98)||(15311321-15311365)
chr1 (38-70)||(15912081-15912113)
chr1 (39-98)||(18913301-18913361)
chr1 (38-94)||(36384076-36384132)
chr1 (38-98)||(43655993-43656053)
chr1 (38-98)||(49924563-49924623)
[»] chr3 (16 HSPs)
chr3 (37-94)||(36188920-36188977)
chr3 (36-98)||(21654390-21654452)
chr3 (36-98)||(53020328-53020390)
chr3 (37-98)||(55400883-55400944)
chr3 (38-98)||(26641027-26641087)
chr3 (36-95)||(32322152-32322211)
chr3 (36-98)||(37323996-37324058)
chr3 (39-95)||(51309561-51309618)
chr3 (54-98)||(31126357-31126401)
chr3 (54-98)||(34022744-34022788)
chr3 (54-98)||(46580680-46580724)
chr3 (39-98)||(16739081-16739140)
chr3 (35-98)||(45347625-45347688)
chr3 (37-98)||(46295990-46296051)
chr3 (34-70)||(47599623-47599659)
chr3 (38-70)||(54485292-54485324)
[»] chr8 (14 HSPs)
chr8 (38-98)||(44411163-44411223)
chr8 (37-98)||(35260204-35260265)
chr8 (39-98)||(27621277-27621336)
chr8 (36-98)||(37598216-37598278)
chr8 (39-96)||(2238550-2238607)
chr8 (39-96)||(24510652-24510709)
chr8 (37-98)||(25321539-25321600)
chr8 (54-98)||(3100100-3100144)
chr8 (54-98)||(11044204-11044248)
chr8 (46-98)||(44052768-44052820)
chr8 (55-98)||(27752733-27752776)
chr8 (40-98)||(37566453-37566511)
chr8 (38-98)||(11992875-11992935)
chr8 (54-98)||(39187377-39187421)
[»] chr2 (16 HSPs)
chr2 (38-98)||(35832556-35832616)
chr2 (36-98)||(15858639-15858701)
chr2 (38-98)||(33635480-33635540)
chr2 (34-98)||(38071398-38071462)
chr2 (39-98)||(792309-792368)
chr2 (39-98)||(21539901-21539960)
chr2 (36-98)||(14565323-14565385)
chr2 (36-98)||(43075893-43075955)
chr2 (37-98)||(10979313-10979374)
chr2 (38-98)||(10478322-10478382)
chr2 (54-98)||(38549611-38549655)
chr2 (50-96)||(13822731-13822777)
chr2 (54-98)||(4092155-4092199)
chr2 (54-98)||(5091508-5091552)
chr2 (38-98)||(28492664-28492724)
chr2 (39-95)||(29513973-29514029)
[»] scaffold0495 (1 HSPs)
scaffold0495 (38-98)||(4774-4834)
[»] chr7 (20 HSPs)
chr7 (34-98)||(21654028-21654092)
chr7 (46-98)||(32491026-32491078)
chr7 (38-98)||(43107816-43107876)
chr7 (36-98)||(35084009-35084072)
chr7 (39-98)||(35181335-35181394)
chr7 (39-95)||(18206231-18206287)
chr7 (35-95)||(18800675-18800735)
chr7 (54-98)||(19932982-19933026)
chr7 (38-98)||(47383549-47383609)
chr7 (39-98)||(3157579-3157638)
chr7 (50-96)||(30082496-30082542)
chr7 (29-95)||(40593964-40594029)
chr7 (42-98)||(22111244-22111301)
chr7 (38-95)||(29235980-29236037)
chr7 (42-98)||(40583288-40583345)
chr7 (46-98)||(2633298-2633349)
chr7 (54-98)||(23106596-23106640)
chr7 (54-98)||(41889314-41889358)
chr7 (54-98)||(44600589-44600633)
chr7 (54-98)||(48879531-48879575)
[»] chr6 (9 HSPs)
chr6 (38-98)||(10228056-10228116)
chr6 (39-98)||(5121410-5121469)
chr6 (54-98)||(12278850-12278894)
chr6 (38-98)||(17721762-17721822)
chr6 (38-98)||(30949279-30949339)
chr6 (39-98)||(374243-374302)
chr6 (52-98)||(21964101-21964147)
chr6 (54-98)||(30766590-30766634)
chr6 (36-96)||(32882642-32882702)


Alignment Details
Target: chr4 (Bit Score: 337; Significance: 0; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 11 - 399
Target Start/End: Original strand, 7756169 - 7756557
Alignment:
Q  11 ataatactcaacattatcataatatatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaactatatttgaataaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||    
T  7756169 ataatactcaacattatcataatatatatactccttccatcccaatttataagacaaaaacaccaattcacacttactaagaaa-ctatatttgaataaa 7756267  T
Q  111 taattagttttatttaatgcaaattgcataattattgagtgcattccacgaaatgcatgctgccatctagaagactagaactcatgaatcagaacttgag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7756268 taattagttttatttaatgcaaattgcataattattgagtgcattccacgaaaggcatgctgccatctagaagactagaactcatgaatcagaacttgag 7756367  T
Q  211 ccactgtagtcattnnnnnnngtaggactccaactccaacttgtaatcatgcaattaagatggtcacattgatggatgttgcataaatatattgtaaatg 310  Q
    ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7756368 ccactgtagtcattaaaaaaagtaggactccaactccaacttgtaatcatgcaattaagatggtcacattgatggatgttgcataaatatattgtaaatg 7756467  T
Q  311 taatcatgcatacacttatttaatgtagattcttcattcgac-aatttctaatatctgaacctaaatgttattccttccagggtcacagg 399  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7756468 taatcatgcatacacttatttaatgtagattcttcattcgacaaatttctaatatctgaacctaaatgttattccttccagggtcacagg 7756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 251 - 399
Target Start/End: Original strand, 7749932 - 7750079
Alignment:
Q  251 ttgtaatcatgcaattaagatggtcacattgatggatgttgcataaatatattgtaaatgtaatcatgcatacacttatttaatgtagattcttcattcg 350  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7749932 ttgtaatcatgcaattaagatagt-acattgatggatgttgcataaatatattgtaaatgtaatcatgcatacacttatttaatgtagattcttcattcg 7750030  T
Q  351 acaatttctaatatctgaacctaaatgttattccttccagggtcacagg 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7750031 acaatttctaatatctgaacctaaatgttattccttccagggtcacagg 7750079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 43980705 - 43980639
Alignment:
Q  32 atatatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  43980705 atatatatattccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 43980639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 29180331 - 29180391
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  29180331 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 29180391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 50768645 - 50768586
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  50768645 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 50768586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 38187645 - 38187707
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| ||||||||||| |||||||| |||||||| ||| |||||||||||    
T  38187645 atatactccctccgtcctaatttataagctaaaaacactaattcacacttattaagaaaacta 38187707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 9798010 - 9798054
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  9798010 aatttataagcaaaaaacactaattcacatttattaagaaaacta 9798054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 10591422 - 10591482
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  10591422 atactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaacta 10591482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 30776403 - 30776463
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| ||||||||||||||||| || |||||||| ||| |||||||||||    
T  30776403 atactccctccgtcctaatttataagcaaaaaaaactaattcacacttattaagaaaacta 30776463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 49902212 - 49902168
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  49902212 aatttataagcaaaaaacactaattcacacttattaagaaaacta 49902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 29899915 - 29899856
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||| ||||||||| |||||||| ||| |||||||||||    
T  29899915 tactccctccgtcctaatttataagtaaaaaacactaattcacatttattaagaaaacta 29899856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 39969909 - 39969968
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  39969909 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaacta 39969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 3043102 - 3043146
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||| ||||||||| |||||||| ||| |||||||||||    
T  3043102 aatttataagtaaaaaacactaattcacacttattaagaaaacta 3043146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 28681844 - 28681800
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  28681844 aatttataagcaaaaaatactaattcacacttattaagaaaacta 28681800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 30777688 - 30777628
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaa-caccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| ||||||||||||||||| ||| |||||||| ||| |||||||||||    
T  30777688 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaacta 30777628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 35462658 - 35462732
Alignment:
Q  24 ttatcataatatatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||| ||||| ||||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  35462658 ttatcgtaataaatatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 35462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 31316755 - 31316814
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  31316755 tactccctccgtcctaatttataagcaaaaaacactaattcacagttattaagaaaacta 31316814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 8145967 - 8146026
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  8145967 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaacta 8146026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 2002100 - 2002146
Alignment:
Q  50 tcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    |||||||||||||| ||||||||| |||||||| ||| |||||||||    
T  2002100 tcccaatttataagaaaaaaacacaaattcacacttattaagaaaac 2002146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 31690573 - 31690630
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    ||||||||||| ||  ||||||||||||||||| || |||||||| ||| ||||||||    
T  31690573 atactccttccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaa 31690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 8541533 - 8541577
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||  |||||||| ||| |||||||||||    
T  8541533 aatttataagcaaaaaacattaattcacacttattaagaaaacta 8541577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 20915049 - 20915005
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  20915049 aatttataagcaaaaaatactaattcacacttattaagaaaacta 20915005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 25962401 - 25962461
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| ||||||||||||||||| |  |||||||| ||| |||||||||||    
T  25962401 atactccctccgtcctaatttataagcaaaaaagaataattcacacttattaagaaaacta 25962461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 36037443 - 36037381
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  36037443 atatactccctccgtcccaatttataagcaaaaaacacaaattcacacttattaagaaaacta 36037381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 40935568 - 40935629
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  40935568 tatactccctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 40935629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 40960430 - 40960490
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  40960430 atactccttccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 40960490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 23873783 - 23873843
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  23873783 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 23873843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 44875367 - 44875323
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  44875367 aatttataagcaaaaaacactaattcacacttactaagaaaacta 44875323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 46949525 - 46949465
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  46949525 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 46949465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 26907048 - 26907107
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  26907048 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 26907107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 6848262 - 6848310
Alignment:
Q  34 atatatactccttccatcccaatttataagcaaaaaacaccaattcaca 82  Q
    ||||||||||| ||||||| |||||||||| ||||||||| ||||||||    
T  6848262 atatatactccctccatcctaatttataagaaaaaaacactaattcaca 6848310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 35942029 - 35941985
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  35942029 aatttataagcaaaaaacactaattcacacttattaagaaaacta 35941985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 18852430 - 18852371
Alignment:
Q  35 tatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaa 94  Q
    |||||||||| ||| | | |||||||||||||||||||| |||||||| ||| |||||||    
T  18852430 tatatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaa 18852371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 25990955 - 25990892
Alignment:
Q  35 tatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||| ||| ||| |||||||||||||||||||  || ||||| ||| |||||||||||    
T  25990955 tatatactccctccgtcctaatttataagcaaaaaacattaaatcacatttattaagaaaacta 25990892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 39026199 - 39026262
Alignment:
Q  36 atatactccttccatcccaatttataagc-aaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| ||||||||||| ||||||||| |||||||| ||| |||||||||||    
T  39026199 atatactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaacta 39026262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 31970266 - 31970320
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaa 93  Q
    |||||||||| ||| ||||||||||||||||| || |||||||| ||| ||||||    
T  31970266 tactccttccgtcctaatttataagcaaaaaatactaattcacacttattaagaa 31970320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 28017861 - 28017800
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||  ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  28017861 tatactccctctgtcctaatttataagcaaaaaacattaattcacacttattaagaaaacta 28017800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 35189390 - 35189349
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  35189390 aatttataagcaaaaaacactaattcacatttattaagaaaa 35189349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 15311365 - 15311321
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||| ||||||| |||||||| ||| |||||||||||    
T  15311365 aatttataagcataaaacactaattcacacttattaagaaaacta 15311321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 15912081 - 15912113
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaa 70  Q
    |||||||||||||||||| ||||||||||||||    
T  15912081 atactccttccatcccaaattataagcaaaaaa 15912113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 18913301 - 18913361
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaa-caccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| ||||||||||||||||| ||| |||||||| ||| |||||||||||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaacta 18913361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 36384132 - 36384076
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaa 94  Q
    ||||||| ||| ||||||||||||||||||||| || | |||||| ||| |||||||    
T  36384132 atactccctccgtcccaatttataagcaaaaaatacaatttcacacttattaagaaa 36384076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 43655993 - 43656053
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||| ||||||||||||  |||||||| ||| |||||||||||    
T  43655993 atactccatccgtcctaatttaaaagcaaaaaacattaattcacacttattaagaaaacta 43656053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 49924623 - 49924563
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||| ||||||||  |||||||| ||| |||||||||||    
T  49924623 atactccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaacta 49924563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 36188920 - 36188977
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaa 94  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  36188920 tatactccctccatcccaatttataagcaaaaaacacaaattcacacttattaagaaa 36188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 21654452 - 21654390
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  21654452 atatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 21654390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 53020390 - 53020328
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  53020390 atatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 53020328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 55400944 - 55400883
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  55400944 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 55400883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 26641027 - 26641087
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  26641027 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 26641087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 32322152 - 32322211
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||| ||| ||||||||    
T  32322152 atatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 32322211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 37323996 - 37324058
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| | | |||||||||||||||||||| |||||||| ||| |||||||||||    
T  37323996 atatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaacta 37324058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 51309618 - 51309561
Alignment:
Q  39 tactccttccatcccaatttataagcaa-aaaacaccaattcacaattactaagaaaa 95  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||| ||| ||||||||    
T  51309618 tactccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaa 51309561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 31126401 - 31126357
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  31126401 aatttataagcaaaaaacactaattcacacttattaagaaaacta 31126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 34022788 - 34022744
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  34022788 aatttataagcaaaaaacactaattcacacttattaagaaaacta 34022744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 46580724 - 46580680
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  46580724 aatttataagcaaaaaacactaattcacacttattaagaaaacta 46580680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 16739081 - 16739140
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| ||||||||||| |||||||| |||||||| ||| |||||||||||    
T  16739081 tactccctccgtcctaatttataagccaaaaacactaattcacacttattaagaaaacta 16739140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 45347625 - 45347688
Alignment:
Q  35 tatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||| || ||| |||||||||| ||||||||| |||||| | ||| |||||||||||    
T  45347625 tatatactcctaccgtcctaatttataagtaaaaaacactaattcatatttattaagaaaacta 45347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 46295990 - 46296051
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||| ||| |||||||||| |||||| || |||||||| ||| |||||||||||    
T  46295990 tatactccctccgtcctaatttataagtaaaaaatactaattcacacttattaagaaaacta 46296051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 47599659 - 47599623
Alignment:
Q  34 atatatactccttccatcccaatttataagcaaaaaa 70  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  47599659 atatatactccttccgtcccaaattataagcaaaaaa 47599623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 54485324 - 54485292
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaa 70  Q
    ||||||| |||||||||||||||||||||||||    
T  54485324 atactccctccatcccaatttataagcaaaaaa 54485292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 44411163 - 44411223
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  44411163 atactccttccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 44411223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 35260265 - 35260204
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  35260265 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 35260204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 27621336 - 27621277
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  27621336 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 27621277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 37598278 - 37598216
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||  ||| |||||||||||    
T  37598278 atatactccctccgtcctaatttataagcaaaaaacactaattcacggttattaagaaaacta 37598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 2238550 - 2238607
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    |||||| ||| || ||||||||||||||||||||| |||||||| ||| |||||||||    
T  2238550 tactccctccgtctcaatttataagcaaaaaacacaaattcacacttattaagaaaac 2238607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 24510652 - 24510709
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    |||||| |||||||||||||||||||||||||||  |||||||| ||| ||| |||||    
T  24510652 tactccctccatcccaatttataagcaaaaaacataaattcacacttattaataaaac 24510709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 25321539 - 25321600
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||| ||| |||||||||||||||||||| |||||||| ||| | |||||||||    
T  25321539 tatactccctccgtcctaatttataagcaaaaaacactaattcacacttatttagaaaacta 25321600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 3100144 - 3100100
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  3100144 aatttataagcaaaaaacactaattcacacttattaagaaaacta 3100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 11044248 - 11044204
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  11044248 aatttataagcaaaaaacactaattcacacttattaagaaaacta 11044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 44052820 - 44052768
Alignment:
Q  46 tccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||||||||||||||||| || |||||||| ||| |||||||||||    
T  44052820 tccatcctaatttataagcaaaaaatactaattcacacttattaagaaaacta 44052768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 27752776 - 27752733
Alignment:
Q  55 atttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||    
T  27752776 atttataagcaaaaaacactaattcacacttattaagaaaacta 27752733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 37566453 - 37566511
Alignment:
Q  40 actccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||| ||| ||| |||||||||||||||||||| |||||||| ||| ||| |||||||    
T  37566453 actccctccgtcctaatttataagcaaaaaacactaattcacacttattaaaaaaacta 37566511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 11992935 - 11992875
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||| ||||||||| |||||||| | | |||||||||||    
T  11992935 atactccctccgtcctaatttataagtaaaaaacactaattcacactaattaagaaaacta 11992875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 39187421 - 39187377
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||  ||| |||||||||||    
T  39187421 aatttataagcaaaaaacactaattcacgcttattaagaaaacta 39187377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 35832616 - 35832556
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  35832616 atactccctccatcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 35832556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 15858639 - 15858701
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  15858639 atatactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 15858701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 33635540 - 33635480
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  33635540 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 33635480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 38071398 - 38071462
Alignment:
Q  34 atatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||| |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  38071398 atatttactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 38071462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 792309 - 792368
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  792309 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 792368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 21539960 - 21539901
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  21539960 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 21539901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 14565323 - 14565385
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  14565323 atatactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaacta 14565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 43075955 - 43075893
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||| ||||||||||||||||| || |||||||| ||| |||||||||||    
T  43075955 atatactccctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaacta 43075893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 10979374 - 10979313
Alignment:
Q  37 tatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||| ||| ||| |||||||||||||||||||| |||||||| | | |||||||||||    
T  10979374 tatactccctccgtcctaatttataagcaaaaaacactaattcacactcattaagaaaacta 10979313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 10478382 - 10478322
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  10478382 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaacta 10478322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 38549611 - 38549655
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  38549611 aatttataagcaaaaaacactaattcacacttattaagaaaacta 38549655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 13822731 - 13822777
Alignment:
Q  50 tcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    ||||||||||||||||||||| || |||||||| ||| |||||||||    
T  13822731 tcccaatttataagcaaaaaatacaaattcacacttattaagaaaac 13822777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 4092199 - 4092155
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||    
T  4092199 aatttataagcaaaaaacactacttcacacttattaagaaaacta 4092155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 5091508 - 5091552
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  5091508 aatttataagcaaaaaatactaattcacacttattaagaaaacta 5091552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 28492724 - 28492664
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| | ||||| |||||||||||||||| ||| || ||||| ||| |||||||||||    
T  28492724 atactccattcatcctaatttataagcaaaaagcactaaatcacacttattaagaaaacta 28492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 29513973 - 29514029
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    |||||| ||| ||| |||||||||||||||||||  |||||||| ||| ||||||||    
T  29513973 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaa 29514029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 4834 - 4774
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  4834 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 4774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 21654028 - 21654092
Alignment:
Q  34 atatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||| ||| | | |||||||||||||||||||| |||||||| ||| |||||||||||    
T  21654028 atatatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaacta 21654092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 32491026 - 32491078
Alignment:
Q  46 tccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  32491026 tccatcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 32491078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 43107816 - 43107876
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  43107816 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaacta 43107876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 35084009 - 35084072
Alignment:
Q  36 atatactccttccatcccaatttataagc-aaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |||||||| ||| |||||||||||    
T  35084009 atatactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaacta 35084072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 35181394 - 35181335
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  35181394 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 35181335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 18206231 - 18206287
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| ||||||||    
T  18206231 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaa 18206287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 18800675 - 18800735
Alignment:
Q  35 tatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    |||||||| | ||| ||||||||||||||||||||| || |||||||| ||| ||||||||    
T  18800675 tatatacttcatccgtcccaatttataagcaaaaaatacaaattcacacttattaagaaaa 18800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 19932982 - 19933026
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||    
T  19932982 aatttataagcaaaaaacactaattcacacttattaagaaaacta 19933026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 47383609 - 47383549
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||||||  || |||||||||||    
T  47383609 atactccctccgtcctaatttataagcaaaaaacacaaattcacacatattaagaaaacta 47383549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 3157638 - 3157579
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||| | ||| |||||||||||    
T  3157638 tactccctccgtcctaatttataagcaaaaaacactaattcatacttattaagaaaacta 3157579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 30082542 - 30082496
Alignment:
Q  50 tcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||||    
T  30082542 tcccaatttataggcaaaaaacacaaattcacacttattaagaaaac 30082496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 40594029 - 40593964
Alignment:
Q  29 ataatatatatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    |||||||| ||||||| ||| ||| ||||||||||||||||| || |||||||| ||| ||||||||    
T  40594029 ataatata-atactccctccgtcctaatttataagcaaaaaatacaaattcacatttattaagaaaa 40593964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 22111244 - 22111301
Alignment:
Q  42 tccttccatcccaatttataagcaaaa-aacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  22111244 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaacta 22111301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 29235980 - 29236037
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaa 95  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| | | ||||||||    
T  29235980 atactccctccgtcctaatttataagcaaaaaacacaaattcacactcattaagaaaa 29236037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 40583345 - 40583288
Alignment:
Q  42 tccttccatcccaatttataagcaaaa-aacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  40583345 tccttccgtcctaatttataagcaaaataacactaattcacacttattaagaaaacta 40583288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 2633298 - 2633349
Alignment:
Q  46 tccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||| ||||||| |||||| ||||||||||| ||| |||||||||||    
T  2633298 tccatcccaaattataagaaaaaaa-accaattcacatttattaagaaaacta 2633349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 23106640 - 23106596
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  23106640 aatttataagcaaaaaatactaattcacacttattaagaaaacta 23106596  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 41889358 - 41889314
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||  |||||||| ||| |||||||||||    
T  41889358 aatttataagcaaaaaacattaattcacacttattaagaaaacta 41889314  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 44600633 - 44600589
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  44600633 aatttataagcaaaaaatactaattcacatttattaagaaaacta 44600589  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 48879575 - 48879531
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||    
T  48879575 aatttataagcaaaaaacactaatttacacttattaagaaaacta 48879531  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 10228116 - 10228056
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  10228116 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 10228056  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 5121410 - 5121469
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaacta 5121469  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 12278894 - 12278850
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||    
T  12278894 aatttataagcaaaaaacatcaattcacacttattaagaaaacta 12278850  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 17721762 - 17721822
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||| ||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  17721762 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaacta 17721822  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 30949339 - 30949279
Alignment:
Q  38 atactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||| ||||||| ||||||||||||||||| || |||||||| ||| ||| |||||||    
T  30949339 atactccctccatcctaatttataagcaaaaaatactaattcacacttattaacaaaacta 30949279  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 374302 - 374243
Alignment:
Q  39 tactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||| ||| ||| |||||||    
T  374302 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaaaaaaacta 374243  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 21964147 - 21964101
Alignment:
Q  52 ccaatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||||    
T  21964147 ccaatttataagcaaaaaaatccaattcacacttactaataaaacta 21964101  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 30766634 - 30766590
Alignment:
Q  54 aatttataagcaaaaaacaccaattcacaattactaagaaaacta 98  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||    
T  30766634 aatttataagcaaaaaatactaattcacacttattaagaaaacta 30766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 32882642 - 32882702
Alignment:
Q  36 atatactccttccatcccaatttataagcaaaaaacaccaattcacaattactaagaaaac 96  Q
    ||||| ||| ||||| |||||||||||||||||||  | |||||||| ||| |||||||||    
T  32882642 atatattccctccattccaatttataagcaaaaaattcaaattcacacttattaagaaaac 32882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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