View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9122_high_8 (Length: 396)

Name: NF9122_high_8
Description: NF9122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9122_high_8
NF9122_high_8
[»] chr8 (23 HSPs)
chr8 (333-381)||(3116377-3116425)
chr8 (18-55)||(1651961-1651998)
chr8 (18-55)||(1740337-1740374)
chr8 (18-55)||(1869956-1869993)
chr8 (18-51)||(5434923-5434956)
chr8 (18-55)||(11920162-11920199)
chr8 (18-55)||(33820003-33820040)
chr8 (18-55)||(38588977-38589014)
chr8 (18-55)||(45077244-45077281)
chr8 (19-55)||(27669440-27669476)
chr8 (18-52)||(22762536-22762570)
chr8 (18-55)||(1432154-1432191)
chr8 (18-55)||(1646896-1646933)
chr8 (18-55)||(11174024-11174061)
chr8 (18-55)||(15048422-15048459)
chr8 (18-55)||(15048789-15048826)
chr8 (18-55)||(22763323-22763360)
chr8 (18-55)||(33819808-33819845)
chr8 (18-55)||(37569337-37569374)
chr8 (18-55)||(45276620-45276657)
chr8 (18-55)||(45276986-45277023)
chr8 (19-55)||(15741622-15741658)
chr8 (19-55)||(15871645-15871681)
[»] chr7 (28 HSPs)
chr7 (18-55)||(8416508-8416545)
chr7 (18-55)||(4155621-4155658)
chr7 (18-55)||(8542888-8542925)
chr7 (18-55)||(10526700-10526737)
chr7 (18-55)||(21391580-21391617)
chr7 (18-55)||(31638333-31638370)
chr7 (18-55)||(33716611-33716648)
chr7 (18-55)||(41891989-41892026)
chr7 (19-55)||(6356675-6356711)
chr7 (18-52)||(6356309-6356343)
chr7 (18-55)||(36283595-36283633)
chr7 (18-60)||(36423785-36423827)
chr7 (18-55)||(1114077-1114114)
chr7 (18-55)||(4931663-4931700)
chr7 (18-55)||(6356788-6356825)
chr7 (18-55)||(7578895-7578932)
chr7 (18-55)||(7579262-7579299)
chr7 (18-55)||(8542522-8542559)
chr7 (18-55)||(8936872-8936909)
chr7 (18-55)||(10526334-10526371)
chr7 (18-55)||(31637966-31638003)
chr7 (18-55)||(36423759-36423796)
chr7 (18-55)||(36673998-36674035)
chr7 (18-55)||(41453028-41453065)
chr7 (18-55)||(41453395-41453432)
chr7 (18-55)||(41752040-41752077)
chr7 (18-55)||(43247438-43247475)
chr7 (19-55)||(17359205-17359241)
[»] chr6 (34 HSPs)
chr6 (18-55)||(32753563-32753600)
chr6 (18-55)||(3423193-3423230)
chr6 (18-55)||(6532215-6532252)
chr6 (22-55)||(14276426-14276459)
chr6 (18-55)||(32993405-32993442)
chr6 (18-55)||(35167513-35167550)
chr6 (19-55)||(7270343-7270379)
chr6 (19-55)||(18052980-18053016)
chr6 (18-52)||(6137402-6137436)
chr6 (18-55)||(978438-978475)
chr6 (18-55)||(2517025-2517062)
chr6 (18-55)||(2517392-2517429)
chr6 (18-55)||(5639563-5639600)
chr6 (18-55)||(5937836-5937873)
chr6 (18-55)||(5938203-5938240)
chr6 (18-55)||(6137767-6137804)
chr6 (18-55)||(7269974-7270011)
chr6 (18-55)||(7438827-7438864)
chr6 (18-55)||(9046476-9046513)
chr6 (18-55)||(15932753-15932790)
chr6 (18-55)||(15932946-15932983)
chr6 (18-55)||(17244687-17244724)
chr6 (18-55)||(18053343-18053380)
chr6 (18-55)||(21856578-21856615)
chr6 (18-55)||(24744351-24744388)
chr6 (18-55)||(25176686-25176723)
chr6 (18-55)||(25180238-25180275)
chr6 (18-55)||(31247506-31247543)
chr6 (18-55)||(32753200-32753237)
chr6 (18-55)||(34517295-34517332)
chr6 (18-55)||(34518082-34518119)
chr6 (18-55)||(34890667-34890704)
chr6 (18-55)||(34891034-34891071)
chr6 (19-55)||(34994404-34994440)
[»] chr5 (21 HSPs)
chr5 (18-55)||(33817674-33817711)
chr5 (18-55)||(2182966-2183003)
chr5 (18-55)||(2183333-2183370)
chr5 (18-55)||(9989346-9989383)
chr5 (18-55)||(24040477-24040514)
chr5 (18-55)||(25183043-25183080)
chr5 (18-55)||(38958747-38958784)
chr5 (18-55)||(38959113-38959150)
chr5 (19-55)||(11315982-11316018)
chr5 (19-55)||(24040109-24040145)
chr5 (21-55)||(39325438-39325472)
chr5 (18-55)||(1140155-1140192)
chr5 (22-55)||(9989713-9989746)
chr5 (18-55)||(19128443-19128480)
chr5 (18-55)||(19184620-19184657)
chr5 (18-55)||(27186263-27186300)
chr5 (18-55)||(35569798-35569835)
chr5 (18-55)||(36440223-36440260)
chr5 (18-55)||(36440590-36440627)
chr5 (18-55)||(39325745-39325782)
chr5 (23-55)||(11316344-11316376)
[»] chr4 (47 HSPs)
chr4 (18-55)||(20888166-20888203)
chr4 (18-55)||(25269390-25269427)
chr4 (18-55)||(38339882-38339919)
chr4 (18-55)||(39448878-39448915)
chr4 (18-55)||(50769211-50769248)
chr4 (18-54)||(44991669-44991705)
chr4 (18-52)||(24898212-24898246)
chr4 (18-55)||(4513306-4513343)
chr4 (18-55)||(12817829-12817866)
chr4 (18-55)||(15477668-15477705)
chr4 (18-55)||(15478035-15478072)
chr4 (18-55)||(19508435-19508472)
chr4 (18-55)||(36122822-36122859)
chr4 (18-55)||(41752206-41752243)
chr4 (18-55)||(44991302-44991339)
chr4 (18-55)||(49136027-49136064)
chr4 (18-55)||(53259528-53259565)
chr4 (18-55)||(55022307-55022344)
chr4 (19-55)||(41751841-41751877)
chr4 (18-52)||(47602966-47603000)
chr4 (18-52)||(55022453-55022487)
chr4 (18-55)||(624069-624106)
chr4 (18-55)||(1433661-1433698)
chr4 (18-55)||(6505560-6505597)
chr4 (18-55)||(6711986-6712023)
chr4 (18-55)||(6712352-6712389)
chr4 (18-55)||(8591992-8592029)
chr4 (18-55)||(8592359-8592396)
chr4 (18-55)||(19088364-19088401)
chr4 (18-55)||(19088731-19088768)
chr4 (18-55)||(23755441-23755478)
chr4 (18-55)||(23756190-23756227)
chr4 (18-55)||(24898579-24898616)
chr4 (18-55)||(25182202-25182239)
chr4 (18-55)||(30683918-30683955)
chr4 (18-55)||(31214185-31214222)
chr4 (18-55)||(39448511-39448548)
chr4 (18-55)||(43566401-43566438)
chr4 (18-55)||(43734309-43734346)
chr4 (18-55)||(43734676-43734713)
chr4 (18-55)||(44957412-44957449)
chr4 (18-55)||(47603751-47603788)
chr4 (18-55)||(52557110-52557147)
chr4 (18-55)||(52692047-52692084)
chr4 (18-55)||(53750925-53750962)
chr4 (18-55)||(53751292-53751329)
chr4 (19-55)||(623703-623739)
[»] chr3 (42 HSPs)
chr3 (18-55)||(11256126-11256163)
chr3 (18-52)||(12203944-12203978)
chr3 (18-52)||(21568769-21568803)
chr3 (18-52)||(22201639-22201673)
chr3 (18-55)||(4773632-4773669)
chr3 (18-55)||(10506338-10506375)
chr3 (18-55)||(26318572-26318609)
chr3 (18-55)||(27801512-27801549)
chr3 (18-55)||(39241381-39241418)
chr3 (18-55)||(39664207-39664244)
chr3 (18-55)||(39664574-39664611)
chr3 (18-55)||(54107925-54107962)
chr3 (18-55)||(54108292-54108329)
chr3 (18-52)||(4773266-4773300)
chr3 (18-52)||(12791569-12791603)
chr3 (18-52)||(47303409-47303443)
chr3 (18-55)||(1994192-1994229)
chr3 (18-55)||(1999351-1999388)
chr3 (18-55)||(4757883-4757920)
chr3 (18-55)||(5900446-5900483)
chr3 (18-55)||(5900813-5900850)
chr3 (18-55)||(8473869-8473906)
chr3 (18-55)||(11256493-11256530)
chr3 (18-55)||(12203574-12203611)
chr3 (18-55)||(13866043-13866080)
chr3 (18-55)||(15790702-15790739)
chr3 (18-55)||(18464479-18464516)
chr3 (18-55)||(19883630-19883667)
chr3 (18-55)||(21569135-21569172)
chr3 (18-55)||(22202006-22202043)
chr3 (18-55)||(24428957-24428994)
chr3 (18-55)||(26318205-26318242)
chr3 (18-55)||(28985532-28985569)
chr3 (18-55)||(44317605-44317642)
chr3 (18-55)||(44893763-44893800)
chr3 (18-55)||(45306855-45306892)
chr3 (18-55)||(45307082-45307119)
chr3 (18-55)||(47669282-47669319)
chr3 (18-55)||(51509142-51509179)
chr3 (18-55)||(53716317-53716354)
chr3 (19-55)||(20963615-20963651)
chr3 (19-55)||(43839984-43840020)
[»] chr2 (24 HSPs)
chr2 (18-55)||(38333070-38333107)
chr2 (19-55)||(2148276-2148312)
chr2 (18-55)||(10991874-10991911)
chr2 (18-55)||(13193378-13193415)
chr2 (18-55)||(15405779-15405816)
chr2 (18-55)||(16305415-16305452)
chr2 (18-55)||(17032616-17032653)
chr2 (18-55)||(36713611-36713648)
chr2 (18-55)||(38332727-38332764)
chr2 (18-53)||(29472634-29472669)
chr2 (18-55)||(7496003-7496040)
chr2 (18-55)||(7496369-7496406)
chr2 (18-55)||(8174275-8174312)
chr2 (18-55)||(8963207-8963244)
chr2 (18-55)||(12860403-12860440)
chr2 (18-55)||(13193011-13193048)
chr2 (18-55)||(15406146-15406183)
chr2 (18-55)||(15744480-15744517)
chr2 (18-55)||(17050952-17050989)
chr2 (18-55)||(24138091-24138128)
chr2 (18-55)||(29472265-29472302)
chr2 (18-55)||(30898691-30898728)
chr2 (18-55)||(34735366-34735403)
chr2 (18-55)||(34735733-34735770)
[»] chr1 (37 HSPs)
chr1 (18-55)||(2064601-2064638)
chr1 (18-55)||(16024287-16024324)
chr1 (18-55)||(1762697-1762734)
chr1 (18-55)||(8760295-8760332)
chr1 (18-55)||(8762789-8762826)
chr1 (18-55)||(9006214-9006251)
chr1 (18-55)||(16023920-16023957)
chr1 (18-55)||(20306025-20306062)
chr1 (18-55)||(23476731-23476768)
chr1 (18-55)||(34966326-34966363)
chr1 (18-55)||(34967112-34967149)
chr1 (18-55)||(35612105-35612142)
chr1 (18-55)||(35612472-35612509)
chr1 (18-55)||(37304418-37304455)
chr1 (18-55)||(37467610-37467647)
chr1 (18-55)||(44323050-44323087)
chr1 (18-55)||(46593620-46593657)
chr1 (18-55)||(49643694-49643731)
chr1 (19-55)||(27547693-27547729)
chr1 (20-55)||(45052715-45052750)
chr1 (18-52)||(37586086-37586120)
chr1 (18-55)||(4696905-4696942)
chr1 (18-51)||(5536421-5536454)
chr1 (18-55)||(5537194-5537231)
chr1 (18-55)||(6798197-6798234)
chr1 (18-55)||(10831154-10831191)
chr1 (18-55)||(12481082-12481119)
chr1 (18-55)||(12481449-12481486)
chr1 (18-55)||(23598095-23598132)
chr1 (18-55)||(26723191-26723228)
chr1 (18-55)||(27548059-27548096)
chr1 (18-55)||(31704003-31704040)
chr1 (18-55)||(37304051-37304088)
chr1 (18-55)||(37585716-37585753)
chr1 (18-55)||(39486225-39486262)
chr1 (18-55)||(45053079-45053116)
chr1 (18-55)||(46592835-46592872)
[»] scaffold0221 (1 HSPs)
scaffold0221 (18-55)||(8818-8855)
[»] scaffold0134 (2 HSPs)
scaffold0134 (18-55)||(14525-14562)
scaffold0134 (18-55)||(14158-14195)
[»] scaffold0115 (1 HSPs)
scaffold0115 (18-55)||(22543-22580)
[»] scaffold0072 (1 HSPs)
scaffold0072 (18-52)||(15476-15510)
[»] scaffold0220 (1 HSPs)
scaffold0220 (18-55)||(20774-20811)
[»] scaffold0186 (1 HSPs)
scaffold0186 (18-55)||(24552-24589)
[»] scaffold0182 (1 HSPs)
scaffold0182 (18-55)||(20098-20135)
[»] scaffold0029 (2 HSPs)
scaffold0029 (18-55)||(72785-72822)
scaffold0029 (18-55)||(73151-73188)
[»] scaffold0340 (1 HSPs)
scaffold0340 (23-55)||(18663-18695)
[»] scaffold0225 (1 HSPs)
scaffold0225 (19-55)||(9806-9842)


Alignment Details
Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 3116425 - 3116377
Alignment:
Q  333 cacttgttttgatggaaaatctcaaagcaggggtaaaagacgcatctct 381  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3116425 cacttgttttgatggaaaatctcaaagcagaggtaaaagacgcatctct 3116377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 1651998 - 1651961
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1651998 ctaactatttaattggtatcggattggtcctctaacta 1651961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 1740374 - 1740337
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1740374 ctaactatttaattggtatcggattggtcctctaacta 1740337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1869956 - 1869993
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1869956 ctaactatttaattggtatcagattgatcctctaacta 1869993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 5434923 - 5434956
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctcta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  5434923 ctaactatttaattggtatcggattgatcctcta 5434956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 11920199 - 11920162
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11920199 ctaactatttaattggtatcggattggtcctctaacta 11920162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 33820040 - 33820003
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  33820040 ctaactatttaattggtatcggattgatcatctaacta 33820003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38589014 - 38588977
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38589014 ctaactatttaattggtattggattgatcctctaacta 38588977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 45077244 - 45077281
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  45077244 ctaactatttaattggtatcagattgatcctctaacta 45077281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 27669440 - 27669476
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  27669440 taactatttaattggtatcggattggtcctctaacta 27669476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 22762536 - 22762570
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    ||||||||||||||||||||||||| |||||||||    
T  22762536 ctaactatttaattggtatcggattaatcctctaa 22762570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1432154 - 1432191
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  1432154 ctaactatttaattggtatcagattggtcctctaacta 1432191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 1646933 - 1646896
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| || ||||||||    
T  1646933 ctaactatttaattggtatcggattggtcatctaacta 1646896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 11174061 - 11174024
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  11174061 ctaactatttaattggtatctgattggtcctctaacta 11174024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15048422 - 15048459
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  15048422 ctaactatttaattggtatcggattagtcctctaacta 15048459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15048826 - 15048789
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15048826 ctaactatttagttggtatcggattggtcctctaacta 15048789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22763360 - 22763323
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  22763360 ctaactatttaattggtatcagattggtcctctaacta 22763323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33819808 - 33819845
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  33819808 ctaattatttaattggtatcggattggtcctctaacta 33819845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 37569337 - 37569374
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  37569337 ctaactatttaattggtatcagattggtcctctaacta 37569374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 45276620 - 45276657
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  45276620 ctaactatttagttggtatcggattggtcctctaacta 45276657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 45277023 - 45276986
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  45277023 ctaactatttaattggtatcggattagtcctctaacta 45276986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 15741658 - 15741622
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  15741658 taactatttaattggtatcggtttggtcctctaacta 15741622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 15871645 - 15871681
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||| |||||||||| |||||||||||    
T  15871645 taactatttaattgatatcggattggtcctctaacta 15871681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8416508 - 8416545
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8416508 ctaactatttaattggtatcggattgatcctctaacta 8416545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4155621 - 4155658
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4155621 ctaactatttaattggtatcggtttgatcctctaacta 4155658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8542925 - 8542888
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8542925 ctaactatttagttggtatcggattgatcctctaacta 8542888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 10526737 - 10526700
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  10526737 ctaactatttaattggtatcggattggtcctctaacta 10526700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 21391617 - 21391580
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21391617 ctaactatttaattggtatcggattggtcctctaacta 21391580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 31638370 - 31638333
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  31638370 ctaactatttaattggtatcggattggtcctctaacta 31638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33716611 - 33716648
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  33716611 ctaactatttaattggtatcggattggtcctctaacta 33716648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 41891989 - 41892026
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  41891989 ctaactatttaattggtatcggattggtcctctaacta 41892026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 6356711 - 6356675
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  6356711 taactatttaattggtatcggattggtcctctaacta 6356675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 6356309 - 6356343
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  6356309 ctaactatttaattggtatcggattggtcctctaa 6356343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 36283633 - 36283595
Alignment:
Q  18 ctaactatttaattggtatcgga-ttgatcctctaacta 55  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  36283633 ctaactatttaattggtatcggatttgatcctctaacta 36283595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 36423827 - 36423785
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaactatttaa 60  Q
    ||||||||||||||||||| |||||  ||||||||||||||||    
T  36423827 ctaactatttaattggtattggatttgtcctctaactatttaa 36423785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1114077 - 1114114
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  1114077 ctaactatttagttggtatcggattggtcctctaacta 1114114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 4931700 - 4931663
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  4931700 ctaactatttaattggtatcgaattggtcctctaacta 4931663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6356788 - 6356825
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6356788 ctaactatttaattggtatcagattggtcctctaacta 6356825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7578895 - 7578932
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  7578895 ctaactatttagttggtatcggattggtcctctaacta 7578932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 7579299 - 7579262
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  7579299 ctaactatttaattggtatcggattagtcctctaacta 7579262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8542522 - 8542559
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8542522 ctaactatttagttggtatcggattggtcctctaacta 8542559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8936872 - 8936909
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8936872 ctaactatttagttggtatcggattggtcctctaacta 8936909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10526334 - 10526371
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  10526334 ctaactatttaattggtatcagattggtcctctaacta 10526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 31637966 - 31638003
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  31637966 ctaactatttaattggtatcagattggtcctctaacta 31638003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 36423796 - 36423759
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  36423796 ctaactatttaattggtatcagattggtcctctaacta 36423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 36673998 - 36674035
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  36673998 ctaactatttagttggtatcggattggtcctctaacta 36674035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 41453028 - 41453065
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  41453028 ctaactatttagttggtatcggattggtcctctaacta 41453065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 41453432 - 41453395
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  41453432 ctaactatttagttggtatcggattggtcctctaacta 41453395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 41752077 - 41752040
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  41752077 ctaactatttaattggtatcagattggtcctctaacta 41752040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 43247438 - 43247475
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  43247438 ctaactatttaattgatatcggattggtcctctaacta 43247475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 17359205 - 17359241
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||| |||||| |||||||||||    
T  17359205 taactatttaattggtattggattggtcctctaacta 17359241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 32753600 - 32753563
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32753600 ctaactatttaattggtatcggattgatcctctaacta 32753563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 3423193 - 3423230
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  3423193 ctaactatttaattggtatcggattggtcctctaacta 3423230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6532215 - 6532252
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6532215 ctaactatttaatttgtatcggattgatcctctaacta 6532252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 14276426 - 14276459
Alignment:
Q  22 ctatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||    
T  14276426 ctatttaattggtatcggattgatcctctaacta 14276459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 32993442 - 32993405
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  32993442 ctaactatttaattggtatcggattggtcctctaacta 32993405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35167513 - 35167550
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35167513 ctaactatttagttggtatcggattgatcctctaacta 35167550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 7270379 - 7270343
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7270379 taactatttaattggtatcgaattgatcctctaacta 7270343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 18052980 - 18053016
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18052980 taactatttaattggtatcggattggtcctctaacta 18053016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 6137402 - 6137436
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  6137402 ctaactatttaattggtatcggattggtcctctaa 6137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 978438 - 978475
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  978438 ctaactatttagttggtatcgtattgatcctctaacta 978475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 2517025 - 2517062
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  2517025 ctaactatttaattggtatcggattagtcctctaacta 2517062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2517429 - 2517392
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  2517429 ctaactatttagttggtatcggattggtcctctaacta 2517392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5639600 - 5639563
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  5639600 ctaactatttaattggtatcggattagtcctctaacta 5639563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 5937836 - 5937873
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  5937836 ctaactatttaattggtatcagattgattctctaacta 5937873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5938240 - 5938203
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  5938240 ctaattatttaattggtatcggattggtcctctaacta 5938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6137804 - 6137767
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  6137804 ctaactatttaattggtatcggattggtcctttaacta 6137767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7269974 - 7270011
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  7269974 ctaactatttaattggtattggattggtcctctaacta 7270011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7438827 - 7438864
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  7438827 ctaactatttaattggtatcagattggtcctctaacta 7438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 9046513 - 9046476
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  9046513 ctaactatttaattggtattggattggtcctctaacta 9046476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15932753 - 15932790
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15932753 ctaactatttagttggtatcggattggtcctctaacta 15932790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15932983 - 15932946
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15932983 ctaactatttagttggtatcggattggtcctctaacta 15932946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17244687 - 17244724
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  17244687 ctaactatttaattggtatcggtttggtcctctaacta 17244724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18053380 - 18053343
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  18053380 ctaactatttaattggtatcagattggtcctctaacta 18053343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 21856578 - 21856615
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  21856578 ctaactatttagttggtatcggattggtcctctaacta 21856615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 24744351 - 24744388
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  24744351 ctaactatttaattggtatcggattagtcctctaacta 24744388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 25176686 - 25176723
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  25176686 ctaactatttagttggtatcggattggtcctctaacta 25176723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25180275 - 25180238
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  25180275 ctaactatttagttggtatcggattggtcctctaacta 25180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 31247543 - 31247506
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  31247543 ctaactatttagttggtatcggattggtcctctaacta 31247506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 32753200 - 32753237
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  32753200 ctaactatttaattagtatcagattgatcctctaacta 32753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34517295 - 34517332
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  34517295 ctaactatttaattggtgtcggattggtcctctaacta 34517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34518119 - 34518082
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  34518119 ctaactatttaattggtatcggattggtcctcaaacta 34518082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34890667 - 34890704
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  34890667 ctaactatttaattggtattggattggtcctctaacta 34890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34891071 - 34891034
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  34891071 ctaactatttaattggtatcagattggtcctctaacta 34891034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 34994404 - 34994440
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||| |||||| |||||||||||    
T  34994404 taactatttaattggtattggattggtcctctaacta 34994440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 33817711 - 33817674
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33817711 ctaactatttaattggtatcggattgatcctctaacta 33817674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 2182966 - 2183003
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  2182966 ctaactatttaattggtatcggattggtcctctaacta 2183003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2183370 - 2183333
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2183370 ctaactatttaattggtatcggattgatcctttaacta 2183333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 9989346 - 9989383
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9989346 ctaactatttaattggtatcggattggtcctctaacta 9989383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24040514 - 24040477
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24040514 ctaactatttaattagtatcggattgatcctctaacta 24040477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25183080 - 25183043
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25183080 ctaactatttaattggtatcggattggtcctctaacta 25183043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38958747 - 38958784
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38958747 ctaactatttaattggtatcggattggtcctctaacta 38958784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38959150 - 38959113
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38959150 ctaactatttaattggtatcggattggtcctctaacta 38959113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 11315982 - 11316018
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11315982 taactatttaattggtatcggattggtcctctaacta 11316018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 24040109 - 24040145
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24040109 taactatttaattggtatcggattggtcctctaacta 24040145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 39325438 - 39325472
Alignment:
Q  21 actatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||| |||||||||||    
T  39325438 actatttaattggtatcggattggtcctctaacta 39325472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 1140192 - 1140155
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  1140192 ctaactatttagttggtatcggattggtcctctaacta 1140155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 9989746 - 9989713
Alignment:
Q  22 ctatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| ||||||||    
T  9989746 ctatttaattggtatcggattgatcttctaacta 9989713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 19128480 - 19128443
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  19128480 ctaactatttaattagtatcagattgatcctctaacta 19128443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19184620 - 19184657
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  19184620 ctaactatttaattggtatcggtttggtcctctaacta 19184657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 27186300 - 27186263
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  27186300 ctaactatttaattggtatcagattggtcctctaacta 27186263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35569798 - 35569835
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  35569798 ctaactatttagttggtatcggattggtcctctaacta 35569835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 36440223 - 36440260
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  36440223 ctaactatttagttggtatcagattgatcctctaacta 36440260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 36440627 - 36440590
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  36440627 ctaactatttaattggtatcggattagtcctctaacta 36440590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 39325782 - 39325745
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  39325782 ctaattatttaattggtatcggattggtcctctaacta 39325745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11316376 - 11316344
Alignment:
Q  23 tatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||||||||||    
T  11316376 tatttaattggtatcggattggtcctctaacta 11316344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 20888166 - 20888203
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20888166 ctaactatttaattggtatcggattgatcctctaacta 20888203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25269427 - 25269390
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25269427 ctaactatttaattggtatcggattgatcctctaacta 25269390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38339919 - 38339882
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38339919 ctaactatttaattggtatcggattgatcctctaacta 38339882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 39448915 - 39448878
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39448915 ctaactatttaattggtatcggattgatcctctaacta 39448878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 50769248 - 50769211
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50769248 ctaactatttaattggtatcggattgatcctctaacta 50769211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 44991705 - 44991669
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaact 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  44991705 ctaactatttaattggtatcggattgatcctctaact 44991669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 24898212 - 24898246
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||||||||||||    
T  24898212 ctaactatttaattggtatcggattgatcctctaa 24898246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 4513343 - 4513306
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4513343 ctaactatttagttggtatcggattgatcctctaacta 4513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12817829 - 12817866
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12817829 ctaactatttaattggtatcggattggtcctctaacta 12817866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15477668 - 15477705
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15477668 ctaactatttaattggtatcggattggtcctctaacta 15477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15478072 - 15478035
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15478072 ctaactatttaattggtatcggattggtcctctaacta 15478035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19508435 - 19508472
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  19508435 ctaactatttaattggtatcggattggtcctctaacta 19508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 36122859 - 36122822
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36122859 ctaactatttaattggtatcggattggtcctctaacta 36122822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 41752243 - 41752206
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  41752243 ctaactatttaattggtatcggattggtcctctaacta 41752206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 44991302 - 44991339
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  44991302 ctaactatttaattggtatcggattggtcctctaacta 44991339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 49136064 - 49136027
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  49136064 ctaactatttaattggtatcagattgatcctctaacta 49136027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 53259565 - 53259528
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  53259565 ctaactatttaattggtatcagattgatcctctaacta 53259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 55022307 - 55022344
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  55022307 ctaactatttaattggtatcagattgatcctctaacta 55022344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 41751841 - 41751877
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  41751841 taactatttaattggtatcggattggtcctctaacta 41751877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 47602966 - 47603000
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  47602966 ctaactatttaattggtatcggattggtcctctaa 47603000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 55022487 - 55022453
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    ||||||||||||||||||||||||| |||||||||    
T  55022487 ctaactatttaattggtatcggattaatcctctaa 55022453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 624106 - 624069
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  624106 ctaactatttagttggtatcggattggtcctctaacta 624069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 1433698 - 1433661
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  1433698 ctaactatttaattggtatcagattggtcctctaacta 1433661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6505560 - 6505597
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  6505560 ctaactatttaattgatatcggattggtcctctaacta 6505597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6711986 - 6712023
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6711986 ctaactatttaattggtatcagattggtcctctaacta 6712023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6712389 - 6712352
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  6712389 ctaactatttaattggtaatggattgatcctctaacta 6712352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8591992 - 8592029
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8591992 ctaactatttagttggtatcggattggtcctctaacta 8592029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8592396 - 8592359
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8592396 ctaactatttagttggtatcggattggtcctctaacta 8592359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19088364 - 19088401
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  19088364 ctaactatttagttggtatcggaatgatcctctaacta 19088401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 19088768 - 19088731
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  19088768 ctaactatttaattggtatcagattaatcctctaacta 19088731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 23755441 - 23755478
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  23755441 ctaactatttaattggtattggattggtcctctaacta 23755478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 23756227 - 23756190
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  23756227 ctaactatttaattggtatcggattggtcctttaacta 23756190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24898616 - 24898579
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  24898616 ctaactatttaattggtattggattggtcctctaacta 24898579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25182239 - 25182202
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  25182239 ctaactatttagttggtatcagattgatcctctaacta 25182202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30683955 - 30683918
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  30683955 ctaaatatttaattggtatcggattggtcctctaacta 30683918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 31214185 - 31214222
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  31214185 ctaactatttaattggtatcagattggtcctctaacta 31214222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39448511 - 39448548
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  39448511 ctaactatttaattggtatcgaattggtcctctaacta 39448548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 43566401 - 43566438
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  43566401 ctaactatttaattggtatcagattggtcctctaacta 43566438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 43734309 - 43734346
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  43734309 ctaactatttaattggtatcagattggtcctctaacta 43734346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 43734713 - 43734676
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  43734713 ctaactatttaattggtatcagattggtcctctaacta 43734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 44957412 - 44957449
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  44957412 ctaactattttattggtatcggattggtcctctaacta 44957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 47603788 - 47603751
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  47603788 ctaactatttaattggtatcagattggtcctctaacta 47603751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 52557110 - 52557147
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  52557110 ctaactatttaattggtatcgaattggtcctctaacta 52557147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 52692047 - 52692084
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  52692047 ctaactatttaattggtatcagattggtcctctaacta 52692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 53750925 - 53750962
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  53750925 ctaactattaaattggtatcggattggtcctctaacta 53750962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 53751329 - 53751292
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  53751329 ctaactatttaattggtatcagattggtcctctaacta 53751292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 623703 - 623739
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||| |||||||||||||| |||||||||||    
T  623703 taactatttagttggtatcggattggtcctctaacta 623739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 11256126 - 11256163
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11256126 ctaactatttaattggtatcggattgatcctctaacta 11256163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12203978 - 12203944
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||||||||||||    
T  12203978 ctaactatttaattggtatcggattgatcctctaa 12203944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 21568769 - 21568803
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||||||||||||    
T  21568769 ctaactatttaattggtatcggattgatcctctaa 21568803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 22201639 - 22201673
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||||||||||||    
T  22201639 ctaactatttaattggtatcggattgatcctctaa 22201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 4773669 - 4773632
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4773669 ctaactatttaattggtatcagattgatcctctaacta 4773632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 10506375 - 10506338
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  10506375 ctaactatttaattggtatcggattggtcctctaacta 10506338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 26318609 - 26318572
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  26318609 ctaactatttaattggtatcggattaatcctctaacta 26318572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 27801512 - 27801549
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27801512 ctaactatttaattggtatcggattggtcctctaacta 27801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39241381 - 39241418
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  39241381 ctaactatttaattggtatcggattggtcctctaacta 39241418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39664207 - 39664244
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  39664207 ctaactatttaattggtatcggattggtcctctaacta 39664244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 39664611 - 39664574
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  39664611 ctaactatttaattggtatcagattgatcctctaacta 39664574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 54107925 - 54107962
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  54107925 ctaactatttaattggtatcggattggtcctctaacta 54107962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 54108329 - 54108292
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  54108329 ctaactatttaattggtatcggattggtcctctaacta 54108292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4773266 - 4773300
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||| ||||||||||||||    
T  4773266 ctaactatttaattggtatcagattgatcctctaa 4773300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12791603 - 12791569
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  12791603 ctaactatttaattggtatcggattggtcctctaa 12791569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 47303443 - 47303409
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  47303443 ctaactatttaattggtatcggattggtcctctaa 47303409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1994192 - 1994229
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  1994192 ctaactatttagttggtatcggattggtcctctaacta 1994229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1999351 - 1999388
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  1999351 ctaactatttagttggtatcggattggtcctctaacta 1999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 4757920 - 4757883
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  4757920 ctaactatttagttggtatcggattggtcctctaacta 4757883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 5900446 - 5900483
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  5900446 ctaactatttagttggtatcggattggtcctctaacta 5900483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5900850 - 5900813
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  5900850 ctaactatttagttggtatcggattggtcctctaacta 5900813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8473869 - 8473906
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8473869 ctaactatttagttggtatcggattggtcctctaacta 8473906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 11256530 - 11256493
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  11256530 ctaactatttaattggtatcagattggtcctctaacta 11256493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12203574 - 12203611
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| || ||||||||    
T  12203574 ctaactatttaattggtatcggattggtcatctaacta 12203611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 13866043 - 13866080
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  13866043 ctaactatttaattggtatcggtttggtcctctaacta 13866080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15790702 - 15790739
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  15790702 ctaactatttaattggtatcagattggtcctctaacta 15790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 18464479 - 18464516
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  18464479 ctaactatttaattggtattggattggtcctctaacta 18464516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 19883667 - 19883630
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| | |||||||||    
T  19883667 ctaactatttaattggtatcggattggttctctaacta 19883630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 21569172 - 21569135
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  21569172 ctaactatttaattggtatcggattagtcctctaacta 21569135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22202043 - 22202006
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  22202043 ctaactatttaattggtatcagattggtcctctaacta 22202006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24428994 - 24428957
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  24428994 ctaactatttaattggtatcagattggtcctctaacta 24428957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 26318205 - 26318242
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  26318205 ctaactatttagttggtatcggattggtcctctaacta 26318242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 28985532 - 28985569
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  28985532 ctaactatttaattggtatcagattggtcctctaacta 28985569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 44317642 - 44317605
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  44317642 ctaactatttaattggtatcggtttggtcctctaacta 44317605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 44893763 - 44893800
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| || ||||||||    
T  44893763 ctaactatttaattggtatcggattggtcttctaacta 44893800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 45306855 - 45306892
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  45306855 ctaactatttaattggtatcggattagtcctctaacta 45306892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 45307119 - 45307082
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  45307119 ctaactatttagttggtatcagattgatcctctaacta 45307082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 47669282 - 47669319
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  47669282 ctaactatttaattggtatcggattagtcctctaacta 47669319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 51509142 - 51509179
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  51509142 ctaactatttagttggtatcggattggtcctctaacta 51509179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 53716317 - 53716354
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  53716317 ctaactatttaattggtatcagattggtcctctaacta 53716354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 20963651 - 20963615
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  20963651 taactatttaattagtatcggtttgatcctctaacta 20963615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 43839984 - 43840020
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  43839984 taactatttaattagtatcggtttgatcctctaacta 43840020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38333107 - 38333070
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38333107 ctaactatttaattggtatcggattgatcctctaacta 38333070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2148312 - 2148276
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  2148312 taactatttaattggtatcggattgatcctctaacta 2148276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10991874 - 10991911
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10991874 ctaactatttaattggtatcagattgatcctctaacta 10991911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 13193415 - 13193378
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13193415 ctaactatttaattggtatcagattgatcctctaacta 13193378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15405779 - 15405816
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15405779 ctaactatttaattggtatcggattggtcctctaacta 15405816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 16305452 - 16305415
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16305452 ctaactatttaattggtatcggattggtcctctaacta 16305415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17032616 - 17032653
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17032616 ctaactatttaattggtatcggattggtcctctaacta 17032653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 36713611 - 36713648
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36713611 ctaactatttaattggtatcggattgatcttctaacta 36713648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38332727 - 38332764
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38332727 ctaactatttaattggtattggattgatcctctaacta 38332764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 29472669 - 29472634
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaac 53  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29472669 ctaactatttaattggtattggattgatcctctaac 29472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7496003 - 7496040
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  7496003 ctaactatttagttggtatcggattggtcctctaacta 7496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 7496406 - 7496369
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  7496406 ctaactatttagttggtatcggattggtcctctaacta 7496369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8174312 - 8174275
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  8174312 ctaactatttaattggtatcagattggtcctctaacta 8174275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8963244 - 8963207
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| | |||||||||    
T  8963244 ctaactatttaattggtatcggattggttctctaacta 8963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12860403 - 12860440
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  12860403 ctaactatttagttggtatcggattggtcctctaacta 12860440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 13193011 - 13193048
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  13193011 ctaactatttaattggtatcagattggtcctctaacta 13193048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15406183 - 15406146
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  15406183 ctaactatttaattggtattggattggtcctctaacta 15406146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15744480 - 15744517
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15744480 ctaactatttagttggtatcggattggtcctctaacta 15744517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17050952 - 17050989
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  17050952 ctaactatttaattggtattggattggtcctctaacta 17050989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 24138091 - 24138128
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  24138091 ctaactatttaattggtatcagattggtcctctaacta 24138128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29472265 - 29472302
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  29472265 ctaactatttaattggtatcagattggtcctctaacta 29472302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30898728 - 30898691
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  30898728 ctaactatttagttggtatcggattggtcctctaacta 30898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34735366 - 34735403
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  34735366 ctaactatttagttggtatcgaattgatcctctaacta 34735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34735770 - 34735733
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||  |||||||||||    
T  34735770 ctaactatttaattggtatcggattagtcctctaacta 34735733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2064638 - 2064601
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2064638 ctaactatttaattggtatcggattgatcctctaacta 2064601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 16024324 - 16024287
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16024324 ctaactatttaattggtatcggattgatcctctaacta 16024287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1762697 - 1762734
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1762697 ctaactatttaattggtatcggattggtcctctaacta 1762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 8760295 - 8760332
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8760295 ctaactatttaattggtatcggattgaccctctaacta 8760332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8762826 - 8762789
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8762826 ctaactatttaattggtatcggattggtcctctaacta 8762789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 9006214 - 9006251
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9006214 ctaactatttaattggtatcggattgatcctttaacta 9006251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 16023920 - 16023957
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16023920 ctaactatttaattggtatcggattggtcctctaacta 16023957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 20306025 - 20306062
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  20306025 ctaactatttaattggtatcggattggtcctctaacta 20306062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 23476768 - 23476731
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  23476768 ctaactatttaattggtatcggattggtcctctaacta 23476731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34966326 - 34966363
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34966326 ctaactatttaattggtatcggattggtcctctaacta 34966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34967149 - 34967112
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34967149 ctaactatttaattggtatcggattggtcctctaacta 34967112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35612105 - 35612142
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||| |||||||||||||||||||||||||||||||||    
T  35612105 ctaagtatttaattggtatcggattgatcctctaacta 35612142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 35612509 - 35612472
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  35612509 ctaactatttaattggtatcggattggtcctctaacta 35612472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 37304455 - 37304418
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37304455 ctaactatttaattggtatcggattgatcctataacta 37304418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 37467647 - 37467610
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37467647 ctaactatttaattggtatcggattggtcctctaacta 37467610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 44323087 - 44323050
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  44323087 ctaactatttaattggtatcggattggtcctctaacta 44323050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 46593657 - 46593620
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  46593657 ctaactatttaattggtatcggattggtcctctaacta 46593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 49643694 - 49643731
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  49643694 ctaactatttaattggtatcggattggtcctctaacta 49643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 27547693 - 27547729
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  27547693 taactatttaattggtatcggattggtcctctaacta 27547729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 45052715 - 45052750
Alignment:
Q  20 aactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||| |||||||||||||||||    
T  45052715 aactatttaattggtatcagattgatcctctaacta 45052750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 37586120 - 37586086
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    ||||||| |||||||||||||||||||||||||||    
T  37586120 ctaactacttaattggtatcggattgatcctctaa 37586086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4696905 - 4696942
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  4696905 ctaactatttaattggtatcggattggtcctataacta 4696942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 5536421 - 5536454
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctcta 51  Q
    |||||||||||||||||||||||||| |||||||    
T  5536421 ctaactatttaattggtatcggattggtcctcta 5536454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5537231 - 5537194
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  5537231 ctaactatttaatcggtatcggattggtcctctaacta 5537194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6798234 - 6798197
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6798234 ctaactatttaattggtatcagattggtcctctaacta 6798197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10831154 - 10831191
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  10831154 ctaactatttaattggtatcgaattggtcctctaacta 10831191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12481082 - 12481119
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  12481082 ctaactatttagttggtatcggattggtcctctaacta 12481119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 12481486 - 12481449
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  12481486 ctaactatttagttggtatcggattggtcctctaacta 12481449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 23598095 - 23598132
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  23598095 ctaactatttaattggtatcgaattggtcctctaacta 23598132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 26723228 - 26723191
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26723228 ctaactatttaattggtatcagattgatcatctaacta 26723191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 27548096 - 27548059
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  27548096 ctaactatttaattggtatcagattggtcctctaacta 27548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 31704040 - 31704003
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  31704040 ctaactatttagttggtatcggattggtcctctaacta 31704003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 37304051 - 37304088
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  37304051 ctaaccatttaattggtatcggattggtcctctaacta 37304088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 37585716 - 37585753
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||  |||||||||||||||||    
T  37585716 ctaactatttaattggtattagattgatcctctaacta 37585753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39486225 - 39486262
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  39486225 ctaactatttaattggtattggattggtcctctaacta 39486262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 45053116 - 45053079
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  45053116 ctaactatttaattggtatcagattggtcctctaacta 45053079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 46592835 - 46592872
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  46592835 ctaactatttaattgatatcagattgatcctctaacta 46592872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8855 - 8818
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8855 ctaactatttaattggtatcggattggtcctctaacta 8818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 14562 - 14525
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14562 ctaactatttaattgatatcggattgatcctctaacta 14525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 14158 - 14195
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  14158 ctaactatttaattggtatcagattggtcctctaacta 14195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22580 - 22543
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22580 ctaactatttaattggtatcggattggtcctctaacta 22543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 15476 - 15510
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaa 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  15476 ctaactattcaattggtatcggattgatcctctaa 15510  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 20774 - 20811
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  20774 ctaactatttagttggtatcggattggtcctctaacta 20811  T

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Target: scaffold0186 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24589 - 24552
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  24589 ctaactatttagttggtatcggattggtcctctaacta 24552  T

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Target: scaffold0182 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 20135 - 20098
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  20135 ctaactatttagttggtatcggattggtcctctaacta 20098  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 72785 - 72822
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  72785 ctaactatttagttggtatcggattggtcctctaacta 72822  T

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Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 73188 - 73151
Alignment:
Q  18 ctaactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  73188 ctaactatttagttggtatcggattggtcctctaacta 73151  T

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Target: scaffold0340 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 18695 - 18663
Alignment:
Q  23 tatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| |||||||||||    
T  18695 tatttaattggtatcggattggtcctctaacta 18663  T

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Target: scaffold0225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 9806 - 9842
Alignment:
Q  19 taactatttaattggtatcggattgatcctctaacta 55  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  9806 taactatttaattggtatcggtttgctcctctaacta 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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