View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9122_low_1 (Length: 1173)

Name: NF9122_low_1
Description: NF9122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9122_low_1
NF9122_low_1
[»] chr2 (39 HSPs)
chr2 (512-1133)||(11018135-11018741)
chr2 (12-364)||(11017227-11017597)
chr2 (1018-1133)||(11009216-11009327)
chr2 (236-395)||(41573405-41573564)
chr2 (226-364)||(24479154-24479292)
chr2 (226-412)||(30267005-30267192)
chr2 (226-412)||(31342627-31342814)
chr2 (226-349)||(15513669-15513792)
chr2 (226-412)||(44920960-44921146)
chr2 (234-364)||(7702439-7702569)
chr2 (233-349)||(7718194-7718310)
chr2 (267-388)||(26734791-26734911)
chr2 (53-130)||(44411668-44411745)
chr2 (226-358)||(22966525-22966659)
chr2 (226-320)||(40016593-40016687)
chr2 (89-205)||(43752121-43752237)
chr2 (99-205)||(6218969-6219075)
chr2 (99-205)||(41197402-41197508)
chr2 (99-205)||(45367799-45367905)
chr2 (53-132)||(9647856-9647935)
chr2 (56-132)||(38434906-38434986)
chr2 (99-149)||(18958909-18958959)
chr2 (99-188)||(1456232-1456321)
chr2 (89-205)||(3866064-3866180)
chr2 (89-205)||(12734691-12734807)
chr2 (89-205)||(25834673-25834789)
chr2 (97-148)||(11006727-11006778)
chr2 (65-205)||(11992282-11992424)
chr2 (99-130)||(12141546-12141577)
chr2 (89-203)||(2610580-2610694)
chr2 (89-139)||(11412713-11412763)
chr2 (105-138)||(14197404-14197437)
chr2 (261-385)||(15540237-15540361)
chr2 (89-182)||(18188772-18188865)
chr2 (89-130)||(19337099-19337140)
chr2 (99-132)||(23714508-23714541)
chr2 (99-132)||(24102180-24102213)
chr2 (104-205)||(24583806-24583907)
chr2 (53-94)||(37393455-37393496)
[»] chr5 (47 HSPs)
chr5 (257-491)||(42076080-42076309)
chr5 (262-413)||(37233070-37233221)
chr5 (226-412)||(17037545-17037732)
chr5 (245-346)||(40401987-40402088)
chr5 (225-325)||(9333560-9333660)
chr5 (226-412)||(5078975-5079162)
chr5 (226-325)||(9354388-9354487)
chr5 (352-491)||(40389892-40390033)
chr5 (245-348)||(19985016-19985119)
chr5 (226-320)||(7410826-7410920)
chr5 (226-316)||(31068971-31069060)
chr5 (100-205)||(43475243-43475348)
chr5 (244-340)||(10869457-10869552)
chr5 (228-348)||(23679445-23679565)
chr5 (228-348)||(23855246-23855366)
chr5 (52-148)||(37124520-37124618)
chr5 (226-340)||(30786269-30786383)
chr5 (233-306)||(12042195-12042268)
chr5 (226-287)||(18191886-18191947)
chr5 (328-397)||(18191824-18191895)
chr5 (89-205)||(24178502-24178618)
chr5 (89-205)||(38684959-38685075)
chr5 (53-161)||(6888945-6889057)
chr5 (327-413)||(10869759-10869846)
chr5 (89-205)||(4496376-4496492)
chr5 (99-207)||(15588712-15588820)
chr5 (99-195)||(31636104-31636200)
chr5 (99-205)||(1275266-1275372)
chr5 (53-182)||(4026532-4026664)
chr5 (89-130)||(14667755-14667796)
chr5 (100-205)||(20456776-20456881)
chr5 (89-205)||(1287753-1287869)
chr5 (89-205)||(7359434-7359549)
chr5 (77-149)||(12577078-12577149)
chr5 (89-205)||(15489666-15489782)
chr5 (56-129)||(41833832-41833907)
chr5 (89-204)||(14665706-14665821)
chr5 (99-174)||(16347583-16347658)
chr5 (90-149)||(33667209-33667268)
chr5 (99-149)||(18351138-18351188)
chr5 (110-204)||(42199299-42199393)
chr5 (99-148)||(27895-27944)
chr5 (89-130)||(79505-79546)
chr5 (53-139)||(219693-219783)
chr5 (104-205)||(1525651-1525752)
chr5 (99-160)||(15168794-15168855)
chr5 (87-132)||(37065519-37065564)
[»] chr6 (43 HSPs)
chr6 (232-395)||(23264425-23264588)
chr6 (245-396)||(4485493-4485644)
chr6 (228-412)||(14669257-14669442)
chr6 (226-408)||(12591835-12592018)
chr6 (228-412)||(17719634-17719819)
chr6 (226-349)||(16734807-16734930)
chr6 (226-405)||(34374827-34375011)
chr6 (226-349)||(11936742-11936865)
chr6 (226-349)||(15361717-15361840)
chr6 (225-340)||(29667899-29668016)
chr6 (226-412)||(6684096-6684289)
chr6 (236-349)||(11948722-11948835)
chr6 (89-205)||(5258322-5258438)
chr6 (257-412)||(10070688-10070843)
chr6 (226-349)||(23904328-23904450)
chr6 (83-149)||(21870303-21870369)
chr6 (53-130)||(31818490-31818565)
chr6 (25-182)||(2079264-2079425)
chr6 (226-318)||(9631161-9631253)
chr6 (226-315)||(15690440-15690529)
chr6 (261-321)||(2941043-2941103)
chr6 (53-149)||(8364528-8364624)
chr6 (12-139)||(12134141-12134265)
chr6 (53-132)||(6641656-6641739)
chr6 (226-396)||(6673550-6673716)
chr6 (89-131)||(14389415-14389457)
chr6 (261-383)||(27969858-27969980)
chr6 (99-205)||(30031258-30031364)
chr6 (226-363)||(1942571-1942708)
chr6 (241-334)||(30481218-30481311)
chr6 (89-161)||(21352055-21352127)
chr6 (108-204)||(30679417-30679513)
chr6 (89-205)||(32755913-32756029)
chr6 (261-320)||(7601338-7601396)
chr6 (89-204)||(28085368-28085483)
chr6 (98-205)||(31832033-31832140)
chr6 (99-205)||(9593880-9593986)
chr6 (243-305)||(10935800-10935862)
chr6 (311-397)||(30129611-30129697)
chr6 (108-149)||(5897480-5897521)
chr6 (103-216)||(6906990-6907103)
chr6 (437-482)||(12592048-12592092)
chr6 (105-197)||(24665818-24665911)
[»] chr8 (47 HSPs)
chr8 (226-481)||(6403595-6403849)
chr8 (229-491)||(5000684-5000948)
chr8 (226-401)||(31347351-31347525)
chr8 (228-412)||(19369821-19370006)
chr8 (228-412)||(19448452-19448637)
chr8 (228-412)||(19532439-19532624)
chr8 (226-412)||(25637646-25637832)
chr8 (226-401)||(5650866-5651043)
chr8 (226-364)||(6801790-6801928)
chr8 (226-327)||(29553631-29553732)
chr8 (53-205)||(10824338-10824490)
chr8 (226-412)||(5528745-5528932)
chr8 (54-149)||(29700233-29700328)
chr8 (226-349)||(45356087-45356210)
chr8 (226-320)||(28249079-28249173)
chr8 (53-130)||(36143321-36143398)
chr8 (226-401)||(17634393-17634569)
chr8 (228-412)||(18766921-18767106)
chr8 (226-349)||(25638809-25638932)
chr8 (226-348)||(29345433-29345556)
chr8 (262-348)||(6223439-6223525)
chr8 (99-149)||(9695633-9695683)
chr8 (53-119)||(33511312-33511378)
chr8 (99-175)||(2776433-2776509)
chr8 (53-206)||(10080080-10080235)
chr8 (89-205)||(36565415-36565531)
chr8 (99-155)||(41444550-41444606)
chr8 (53-130)||(44681288-44681369)
chr8 (233-364)||(14997630-14997761)
chr8 (53-125)||(45419191-45419265)
chr8 (77-139)||(18474200-18474262)
chr8 (261-358)||(31369072-31369169)
chr8 (100-148)||(12611538-12611586)
chr8 (89-205)||(18125165-18125281)
chr8 (89-205)||(36545141-36545257)
chr8 (89-205)||(40813316-40813432)
chr8 (89-149)||(42493536-42493596)
chr8 (53-182)||(16705714-16705847)
chr8 (89-132)||(25985511-25985554)
chr8 (13-44)||(38667473-38667504)
chr8 (101-139)||(7103274-7103312)
chr8 (99-201)||(12491316-12491418)
chr8 (99-205)||(39946859-39946965)
chr8 (65-148)||(44373740-44373827)
chr8 (108-181)||(6483268-6483341)
chr8 (89-130)||(13171898-13171939)
chr8 (89-205)||(36395123-36395240)
[»] chr3 (39 HSPs)
chr3 (226-396)||(26707861-26708031)
chr3 (228-341)||(16457314-16457427)
chr3 (271-396)||(26735681-26735806)
chr3 (226-412)||(1627857-1628045)
chr3 (247-412)||(2943126-2943291)
chr3 (226-329)||(1613208-1613311)
chr3 (226-412)||(7407665-7407852)
chr3 (228-349)||(13845996-13846117)
chr3 (226-320)||(2550168-2550262)
chr3 (226-295)||(27259474-27259543)
chr3 (53-207)||(36820133-36820289)
chr3 (264-348)||(36035329-36035413)
chr3 (226-349)||(1654578-1654701)
chr3 (226-412)||(5498480-5498668)
chr3 (226-320)||(9633446-9633540)
chr3 (99-205)||(41842685-41842791)
chr3 (97-205)||(47233770-47233878)
chr3 (99-148)||(31337757-31337806)
chr3 (91-155)||(26490309-26490373)
chr3 (241-412)||(35082993-35083171)
chr3 (53-130)||(39600930-39601011)
chr3 (53-205)||(42510190-42510341)
chr3 (99-205)||(51447884-51447990)
chr3 (65-131)||(55244266-55244332)
chr3 (89-174)||(35033138-35033223)
chr3 (89-205)||(22065-22180)
chr3 (234-363)||(2179935-2180066)
chr3 (89-205)||(5168824-5168940)
chr3 (262-358)||(27713405-27713501)
chr3 (87-139)||(38430838-38430890)
chr3 (89-149)||(49503784-49503844)
chr3 (102-205)||(19737002-19737105)
chr3 (102-205)||(19757905-19758008)
chr3 (90-149)||(50960863-50960922)
chr3 (70-130)||(54365225-54365287)
chr3 (99-149)||(54128380-54128430)
chr3 (89-130)||(34719321-34719362)
chr3 (86-139)||(39535680-39535733)
chr3 (113-142)||(44443441-44443470)
[»] chr4 (47 HSPs)
chr4 (294-483)||(48465443-48465633)
chr4 (271-401)||(21317485-21317612)
chr4 (226-400)||(24558918-24559093)
chr4 (228-412)||(1684863-1685048)
chr4 (228-412)||(1152048-1152233)
chr4 (226-412)||(47065945-47066132)
chr4 (226-320)||(4881073-4881167)
chr4 (226-349)||(43600269-43600392)
chr4 (231-302)||(48464047-48464118)
chr4 (261-401)||(37750913-37751053)
chr4 (245-349)||(21539247-21539350)
chr4 (89-204)||(54470199-54470314)
chr4 (226-320)||(4904144-4904238)
chr4 (89-203)||(37797844-37797958)
chr4 (100-204)||(22420889-22420993)
chr4 (100-155)||(42293473-42293528)
chr4 (65-132)||(43070015-43070082)
chr4 (226-349)||(53300353-53300476)
chr4 (91-149)||(31459024-31459082)
chr4 (89-182)||(41192828-41192921)
chr4 (99-148)||(49738835-49738884)
chr4 (53-139)||(51252701-51252789)
chr4 (89-205)||(436221-436337)
chr4 (89-205)||(31959988-31960104)
chr4 (89-205)||(48174267-48174383)
chr4 (89-205)||(52569689-52569805)
chr4 (89-205)||(53707786-53707902)
chr4 (53-124)||(10208990-10209061)
chr4 (89-204)||(27450354-27450469)
chr4 (53-132)||(45423571-45423650)
chr4 (103-161)||(42639238-42639296)
chr4 (227-284)||(26075290-26075347)
chr4 (89-182)||(33709916-33710009)
chr4 (89-205)||(4440845-4440961)
chr4 (56-132)||(30807549-30807625)
chr4 (99-195)||(35555831-35555927)
chr4 (89-205)||(43433916-43434032)
chr4 (89-149)||(50471518-50471578)
chr4 (542-609)||(21607449-21607516)
chr4 (99-182)||(38903917-38904000)
chr4 (89-139)||(28236175-28236225)
chr4 (99-149)||(30621434-30621484)
chr4 (89-155)||(44047572-44047638)
chr4 (226-299)||(26075222-26075295)
chr4 (292-349)||(27739750-27739807)
chr4 (102-139)||(46715612-46715649)
chr4 (104-149)||(49987435-49987480)
[»] chr7 (51 HSPs)
chr7 (228-412)||(9242395-9242580)
chr7 (226-348)||(30089737-30089859)
chr7 (276-396)||(26701083-26701201)
chr7 (226-364)||(3234329-3234467)
chr7 (226-364)||(26621051-26621189)
chr7 (226-356)||(26608507-26608637)
chr7 (261-348)||(16086524-16086611)
chr7 (226-349)||(4685378-4685501)
chr7 (53-147)||(30200195-30200289)
chr7 (53-204)||(33072906-33073059)
chr7 (227-320)||(26224982-26225075)
chr7 (226-349)||(20277335-20277458)
chr7 (226-320)||(10022126-10022220)
chr7 (99-149)||(38920796-38920846)
chr7 (99-216)||(1740803-1740920)
chr7 (65-205)||(38606969-38607112)
chr7 (89-205)||(12841449-12841565)
chr7 (89-205)||(13859182-13859298)
chr7 (58-205)||(27893725-27893871)
chr7 (89-205)||(43281666-43281782)
chr7 (89-205)||(45836654-45836770)
chr7 (89-204)||(19262609-19262723)
chr7 (100-198)||(12966025-12966123)
chr7 (99-205)||(39906544-39906650)
chr7 (89-149)||(42187462-42187522)
chr7 (53-206)||(48736072-48736229)
chr7 (245-320)||(26205419-26205494)
chr7 (241-348)||(26619080-26619186)
chr7 (99-210)||(40169651-40169762)
chr7 (89-139)||(42177255-42177305)
chr7 (99-205)||(46356030-46356136)
chr7 (89-174)||(2885927-2886012)
chr7 (261-318)||(16170308-16170365)
chr7 (89-174)||(35906406-35906491)
chr7 (89-201)||(6374860-6374972)
chr7 (89-149)||(27021922-27021982)
chr7 (89-205)||(29650376-29650492)
chr7 (89-205)||(31005215-31005331)
chr7 (89-149)||(36514437-36514497)
chr7 (89-149)||(43282400-43282460)
chr7 (89-149)||(47848666-47848726)
chr7 (99-130)||(26742145-26742176)
chr7 (99-166)||(28020966-28021033)
chr7 (53-145)||(40139153-40139246)
chr7 (99-205)||(31682776-31682882)
chr7 (98-180)||(36101964-36102046)
chr7 (89-205)||(35559167-35559284)
chr7 (89-130)||(36136756-36136797)
chr7 (89-205)||(37617936-37618053)
chr7 (100-149)||(41948519-41948568)
chr7 (89-174)||(49029268-49029353)
[»] chr1 (49 HSPs)
chr1 (228-412)||(12189956-12190139)
chr1 (226-412)||(51758755-51758942)
chr1 (261-342)||(3399659-3399740)
chr1 (234-364)||(39368599-39368730)
chr1 (226-320)||(16222780-16222874)
chr1 (226-349)||(28636905-28637028)
chr1 (233-325)||(897464-897555)
chr1 (89-205)||(4001629-4001745)
chr1 (89-205)||(15085926-15086042)
chr1 (100-197)||(40416374-40416471)
chr1 (226-306)||(5911682-5911762)
chr1 (89-205)||(8671910-8672026)
chr1 (89-205)||(32082919-32083035)
chr1 (89-197)||(51812517-51812625)
chr1 (233-320)||(13208621-13208708)
chr1 (226-312)||(15214329-15214415)
chr1 (226-401)||(18308150-18308327)
chr1 (99-205)||(51602058-51602164)
chr1 (89-182)||(43423711-43423804)
chr1 (89-205)||(1210737-1210853)
chr1 (89-205)||(2544591-2544707)
chr1 (89-149)||(3819086-3819146)
chr1 (100-204)||(14226004-14226108)
chr1 (99-175)||(32404730-32404806)
chr1 (89-205)||(34792523-34792639)
chr1 (54-133)||(4590774-4590853)
chr1 (99-182)||(48431603-48431686)
chr1 (226-402)||(17112927-17113107)
chr1 (89-130)||(1661422-1661463)
chr1 (100-149)||(5338727-5338776)
chr1 (53-205)||(35828724-35828880)
chr1 (100-149)||(38868885-38868934)
chr1 (89-205)||(696261-696377)
chr1 (261-305)||(1843989-1844033)
chr1 (105-161)||(7921843-7921899)
chr1 (89-201)||(8391764-8391876)
chr1 (99-203)||(13827746-13827850)
chr1 (245-305)||(15204615-15204675)
chr1 (102-161)||(13827935-13827994)
chr1 (89-132)||(16943167-16943210)
chr1 (226-289)||(37097375-37097438)
chr1 (437-491)||(39367970-39368025)
chr1 (89-203)||(30202306-30202420)
chr1 (88-161)||(52073680-52073754)
chr1 (99-132)||(4380015-4380048)
chr1 (86-139)||(8343098-8343151)
chr1 (99-148)||(17267927-17267976)
chr1 (100-205)||(36339977-36340082)
chr1 (113-154)||(37591028-37591069)
[»] scaffold0684 (1 HSPs)
scaffold0684 (228-412)||(658-843)
[»] scaffold0002 (1 HSPs)
scaffold0002 (257-397)||(446211-446350)
[»] scaffold0069 (1 HSPs)
scaffold0069 (233-412)||(40609-40789)
[»] scaffold0576 (1 HSPs)
scaffold0576 (226-349)||(6701-6824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (89-205)||(82713-82829)
[»] scaffold0018 (2 HSPs)
scaffold0018 (83-149)||(44098-44164)
scaffold0018 (89-205)||(31460-31576)
[»] scaffold0570 (1 HSPs)
scaffold0570 (99-204)||(1123-1228)
[»] scaffold0007 (1 HSPs)
scaffold0007 (226-334)||(8747-8853)
[»] scaffold0325 (1 HSPs)
scaffold0325 (101-172)||(11802-11873)


Alignment Details
Target: chr2 (Bit Score: 487; Significance: 0; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 512 - 1133
Target Start/End: Original strand, 11018135 - 11018741
Alignment:
Q  512 ttagtaggataatgcttggttgttgtcgacgtattttgctttaacatattttcatctagttggttaatcatgaagtgtgattctgtttgcagcctaagct 611  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  11018135 ttagtgggataatgcttggttgttgtcgacgtattttgctttaacatattttcatctatttagttaatcatgaagtgtgattctggttgcagcctaagct 11018234  T
Q  612 aatgatacatcattatacatatggatgaatgaactgcacctgcaatgaaggatttttatctaattggcctttttggtttgggtaggtacattattttgtt 711  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11018235 aatgatacatcattatacatatggatgaatgaactgcacctgcaatgaaggaattttatctaattggcctttttggtttgggtaggtacattattttgtt 11018334  T
Q  712 ttagttggattgcttgcgtaggcttctggtaaaaggtattctgcaggacttttgctttgggagaatagattatatattctaactgtcaaatactgcagca 811  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||                ||||| |||||||||||||||||||    
T  11018335 ttagttggattgcttgcgtaggcttctggtaaaaggtaatctgcaggacttttgctttg----------------attcttactgtcaaatactgcagca 11018418  T
Q  812 atttgtacaatccaaacattctttgaaagatattgctatgttatttatactgtgtaaaaatctaatgtaagataagtatccttt-----tgtaaaacttg 906  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     |||||||| ||    
T  11018419 atttgtacaatccaaacattctttgaaagatattgctatgttatttatactatgtaaaaatctaatgtaagataagtatcctttaattttgtaaaacctg 11018518  T
Q  907 tgatgcatcttgttacattggttttagtctttctatgacacagttctcaatttcttcaatttacagagttgacaagcccttgaggtggaagaaggataat 1006  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11018519 tgatgcatcttgttacattggttttagtctttctatgacacagttctcaatttcttcaatttacagagttgacaagcccttgaggtggaagaaggataat 11018618  T
Q  1007 aaggtattgcaccatgagataaaagcatcaaagtagttagttaatatgagttgcttagcttgttgtacaagttaactatgtat-gtaccattttagtgct 1105  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||| ||||||||||||||||    
T  11018619 aaggtattgcaccatgagctaaaagcatcaaagtagttagttaatatgagtt-----gcttgttgtacaagttaactatgtatagtaccattttagtgct 11018713  T
Q  1106 agatgcttgctagtacacaatggctatg 1133  Q
    ||||||||||||||||||||||||||||    
T  11018714 agatgcttgctagtacacaatggctatg 11018741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 12 - 364
Target Start/End: Original strand, 11017227 - 11017597
Alignment:
Q  12 agcagagatgggaatgttgtgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatatta--gagagtcgaggtagcaccta 109  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  11017227 agcagagatgggaatgttgcgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatattaaagagagttgaggtagcaccta 11017326  T
Q  110 tagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagggttg 209  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  11017327 tagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagacccgtagattttgtagttagaagggtagatcaaatggagggttg 11017426  T
Q  210 tccaatcgacaatac----------------tgtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa 293  Q
    || |||||||||| |                 ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11017427 tcaaatcgacaattcaacataattgagatctagtaacaattgaaaaccgttactaaataaagaaaattgttactaattaaatttagtaacatttgaccaa 11017526  T
Q  294 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaa 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11017527 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcagtaacatttaaaaa 11017597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 1018 - 1133
Target Start/End: Original strand, 11009216 - 11009327
Alignment:
Q  1018 ccatgagataaaagcatcaaagtagttagttaatatgagttgcttagcttgttgtacaagttaactatgtat-gtaccattttagtgctagatgcttgct 1116  Q
    ||||||||||||||| |||||||||||||||||||||||||     |||||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  11009216 ccatgagataaaagcgtcaaagtagttagttaatatgagtt-----gcttgttgtacaagttaactatgtatagtaccattttagcgttagatgcttgct 11009310  T
Q  1117 agtacacaatggctatg 1133  Q
    |||||||||| ||||||    
T  11009311 agtacacaatagctatg 11009327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 236 - 395
Target Start/End: Original strand, 41573405 - 41573564
Alignment:
Q  236 aaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacac 335  Q
    |||| ||| ||||||| ||| ||| |||||||||||||||||||||||| || | |||||||||||||||  |||||||||||||   ||||| |||||     
T  41573405 aaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacagttaaacaattgttaggtaaaccccgtgttactaaattacttcaataacat 41573504  T
Q  336 tttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttt 395  Q
    ||||||||||||| | ||||||||| ||| |||| | | ||| |||||||||||||||||    
T  41573505 tttatagtattattagtaacatttagaaaatgttgcttttttgtatttttgtaacacttt 41573564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 24479154 - 24479292
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| | ||||||||| |||  || ||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||| ||||    
T  24479154 gtaacacttgaaaattattactaaatcaagataactgttactaattaaatttagtaacatttgaacaattcttaggtaaagctcgtgttactaaagagct 24479253  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaa 364  Q
    | ||| | | |||||||||||||| |||||||| |||||    
T  24479254 ttagttatattttatagtattatctataacattcaaaaa 24479292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 30267005 - 30267192
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| ||| || |    
T  30267005 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagtt 30267104  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  30267105 ttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaaca 30267192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 31342814 - 31342627
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | |    
T  31342814 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgtt 31342715  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||| || ||  ||  || |||||||||||||||||| ||| ||||||    
T  31342714 ttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 31342627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 15513669 - 15513792
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    ||||||||| |||| ||| | ||||| ||| ||| |||||||| |||||||| |||||| |||| ||||||||||||||||  ||||||||||||||| |    
T  15513669 gtaacaattaaaaattgtaagtaaatcaagaaaaatgttactagttaaattttgtaacacttgaacaattgttaggtaaagctcgtgttactaaaaagat 15513768  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  15513769 ttagttacattttatagtactatc 15513792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 44920960 - 44921146
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||  |||| |||||||||||||||||||||||  | | ||||||||||||||||  |||||||||||| || |    
T  44920960 gtaacacttgaaaattgtaactaaatcaaaaaaat-gttactaattaaatttagtaacacctaaacaattgttaggtaaagctcgtgttactaaagagtt 44921058  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  44921059 ttagttacattttatagtactatccgtaacaataaaaaaatgtcgcaaatgttacactattgtaacactttttgtatcactagtaaca 44921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 234 - 364
Target Start/End: Original strand, 7702439 - 7702569
Alignment:
Q  234 tgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaac 333  Q
    |||||| | ||||||||| ||  ||| ||||| |||||||| |||||||||||||  |||||||||||||||| || | |||||||| ||||| ||| ||    
T  7702439 tgaaaattattactaaattaaaaaaaatgttattaattaaaattagtaacatttgtacaattgttaggtaaagcccatattactaaagagctttagttac 7702538  T
Q  334 actttatagtattatcaataacatttaaaaa 364  Q
    | ||| ||||||||||  |||||||||||||    
T  7702539 attttgtagtattatctgtaacatttaaaaa 7702569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 233 - 349
Target Start/End: Original strand, 7718194 - 7718310
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 332  Q
    ||||||| ||| ||||||| ||| ||| | ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||| || || | | |    
T  7718194 ttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacatgaacaattgttagataaagtccgtgttactaaagagttttaatta 7718293  T
Q  333 cactttatagtattatc 349  Q
    || ||||||||| ||||    
T  7718294 cattttatagtactatc 7718310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 26734791 - 26734911
Alignment:
Q  267 taattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaact 366  Q
    ||||||||||||| || ||||||  |||||||||||||||||| | ||| |||| ||||| |||| || |||| | |||||||| ||||| || |||| |    
T  26734791 taattaaatttagcaatatttgaataattgttaggtaaagtccatattattaaagagctttagtatcattttacaatattatcagtaaca-ttcaaaatt 26734889  T
Q  367 gttacatatttatatttttgta 388  Q
    ||||| ||||||||||||||||    
T  26734890 gttacttatttatatttttgta 26734911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 44411668 - 44411745
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    |||||||||||||||| |||||  ||||| || |||||||||| || |||||||||||||||| ||||||||||||||    
T  44411668 aagactagatgagatatgattacaaatgacaacattagagagttgaagtagcacctatagtaggaaagatggtggaaa 44411745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 358
Target Start/End: Original strand, 22966525 - 22966659
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaagga--aattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaag 323  Q
    |||||| ||||||||| ||||||||||||  |  || | |||||||| ||||||||| |||||| | |||||||||||||||| || |||||||||| |     
T  22966525 gtaacacttgaaaactattactaaataaaaaataaaatattactaatgaaatttagttacatttaaacaattgttaggtaaagcccctgttactaaagac 22966624  T
Q  324 cttcagtaacactttatagtattatcaataacatt 358  Q
    ||| ||| ||| |||| |||||||||  |||||||    
T  22966625 ctttagttacattttagagtattatctgtaacatt 22966659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 40016593 - 40016687
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||| | ||| ||||| ||| ||| ||||||| |||||||||||||||||||||  ||||||||||||||| || | ||||||||    
T  40016593 gtaacacttgaaaattattattaaatcaagtaaaatgttactgattaaatttagtaacatttgaataattgttaggtaaagaccctattactaaa 40016687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 43752237 - 43752121
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | |||||| |||||||||| |||| ||||| ||| |  |||||| ||||||  | ||    
T  43752237 agagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggag 43752138  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||||| |||||||    
T  43752137 agtagatcagatggagg 43752121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 6218969 - 6219075
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||| ||||||||||||||| ||||| | | |||||| ||| |||||| |||| ||||||||||  ||||||| |||||| || || |  ||||||    
T  6218969 ggtagcacttatagtagaaaagatagtggataataggcttaggtggtttggacatgtagagaggagatatgtagattatgtagtaaggagaggtgatcaa 6219068  T
Q  199 atggagg 205  Q
    |||||||    
T  6219069 atggagg 6219075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 41197508 - 41197402
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    ||||||||||||| |||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||||||||||||   || || ||||| |||||||||    
T  41197508 ggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagatccgtagatgccgttgtaagaagagtagatcaa 41197409  T
Q  199 atggagg 205  Q
    |||||||    
T  41197408 atggagg 41197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 45367905 - 45367799
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| |   ||||  || |||||| |||| ||||| ||| ||||||||   || ||||||||||||||||||    
T  45367905 ggtagcacctatagtagaaaagttggtagaaaataaccttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagggtagatcaa 45367806  T
Q  199 atggagg 205  Q
    |||||||    
T  45367805 atggagg 45367799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 9647935 - 9647856
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||||||| ||||||||||| ||||  || |||| ||||| | || || |||||||||||||| |||||||||||||    
T  9647935 aagactagatgtgataagattagaaatgtcaacattatagagttggggcagtacctatagtagaaatgatggtggaaact 9647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 38434906 - 38434986
Alignment:
Q  56 actagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||||| |||| |||||||| ||||| || |||||||||    | | ||||||||||||||||||||||||||||||||||    
T  38434906 actagacgagagaagattagaaatgacaacattagagagagaattggggtagcacctatagtagaaaagatggtggaaact 38434986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 18958909 - 18958959
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| |||||    
T  18958909 ggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttgg 18958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 1456232 - 1456321
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||  ||||||  ||| ||||  |||||  ||||||||| ||| |||||    
T  1456232 ggtagcacctatcctagaaaagatggtggaaactcggcttaggtagtttggacgtgtagagataagatctctagattttgaagtaagaag 1456321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 3866064 - 3866180
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||| ||||| |||| |||| | ||||||  || ||||   |||| ||||| ||| |||||||| | || || |||||    
T  3866064 agagagtgggggtagcacctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgtagatgtcgtggtaagaag 3866163  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  3866164 agtagatcaaatggagg 3866180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 12734691 - 12734807
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||  |||| |||| | ||||||  || |||||| ||||  |||| ||| ||||||||   || || |||||    
T  12734691 agagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtagatgccgtggtaagaag 12734790  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  12734791 agtagatcaaatggagg 12734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 25834673 - 25834789
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| | || |||   || || |||||    
T  25834673 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtggatgccgttgtaagaag 25834772  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  25834773 agtagatcaaatggagg 25834789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 11006727 - 11006778
Alignment:
Q  97 gaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||| ||||    
T  11006727 gaggtagcatctatagtagaaaagatgacggaaactcgacttaagtggtttg 11006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 11992424 - 11992282
Alignment:
Q  65 gataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagagg 162  Q
    ||||||||||||||||| |  |||||||||  |   |||||||||||||||||||||| |||| |||| |  |||||  || |||||| || | |||||     
T  11992424 gataagattaggaatgacaccattagagagagtgagggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttggacatatagagaga 11992325  T
Q  163 agatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
    ||| ||||||||   || |||||||| || |||||||||||||    
T  11992324 agacccgtagatgccgttgttagaagagtggatcaaatggagg 11992282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 12141546 - 12141577
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||||||||||||||||||||||||||||    
T  12141546 ggtagcacctatagtagaaaagatggtggaaa 12141577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 2610580 - 2610694
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | ||||||||||||||| |||||| |||| |||| | ||||||  || |||||  |||| ||||| |||  ||||||| | || || |||||    
T  2610580 agagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgtcgtggtaagaag 2610679  T
Q  189 ggtagatcaaatgga 203  Q
     ||||||||||||||    
T  2610680 agtagatcaaatgga 2610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 11412713 - 11412763
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||| | ||||||||||||||||||||| |||||||||| | ||||||    
T  11412713 agagagttggggtagcacctatagtagaaaatatggtggaaaataggctta 11412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 14197437 - 14197404
Alignment:
Q  105 acctatagtagaaaagatggtggaaactcggctt 138  Q
    |||||||||||||||||||||||||||| |||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctt 14197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 15540361 - 15540237
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaaca-ctttatagtattatcaataacattt 359  Q
    |||||||||||| || ||||||||||| | |||||| ||||||||||  ||| |||||||  |  |||||||||  ||| ||||||||| | ||||| ||    
T  15540361 tgttactaattatatctagtaacattt-aacaattgataggtaaagtttgtggtactaaacggtatcagtaacatttttttagtattattagtaacaatt 15540263  T
Q  360 aaaaactgttacatatttatattttt 385  Q
    ||||| |||||| | |||| ||||||    
T  15540262 aaaaaatgttacttgtttacattttt 15540237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 18188772 - 18188865
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||| | |||||||||| |  ||||||||||||||||| |||| |||| ||| |||||  ||||  |||| |||||  |||||||||||||    
T  18188772 agagagttggggtagcacctcttctagaaaagatggtggaagctcgacttaggtggtttgggcatgtaaagagaagatctatagattttgtagt 18188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 19337140 - 19337099
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | ||||||||||||||||| ||||||||||||||    
T  19337140 agagagttggggtagcacctatagtagtaaagatggtggaaa 19337099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 23714541 - 23714508
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||||||| |||||||||||||||||||||||||    
T  23714541 ggtagcacatatagtagaaaagatggtggaaact 23714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 24102213 - 24102180
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||||||| |||||||||||||||||||||||||    
T  24102213 ggtagcacatatagtagaaaagatggtggaaact 24102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 24583907 - 24583806
Alignment:
Q  104 cacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgga 203  Q
    |||||||| |||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||  ||| || ||||| ||||||||||||||    
T  24583907 cacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatgga 24583808  T
Q  204 gg 205  Q
    ||    
T  24583807 gg 24583806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 37393496 - 37393455
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag 94  Q
    |||||||||||||||| ||| || ||||||||||||||||||    
T  37393496 aagactagatgagatatgatcagaaatgaaaatattagagag 37393455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 1e-62; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 257 - 491
Target Start/End: Original strand, 42076080 - 42076309
Alignment:
Q  257 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 356  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| || | ||||||||||||||  |||||    
T  42076080 aaattgttactaattaaatttagtaacatttgaacaattgttagataaagtccatgttactaaaaagcttcaggaatattttatagtattatcggtaaca 42076179  T
Q  357 tttaaaaactgttacatatttata-tttttgtaacactttttgtattactagtaacatnnnnnnntgtcacatatttataatttgagaagttgtaaaaaa 455  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||| | ||| |        |||||||| |||||||||||||||||||| |||||    
T  42076180 tttaaaaattgttacatatttatattttttttaacactttttgtattacca-taaaa----aaaatgtcacatttttataatttgagaagttgt-aaaaa 42076273  T
Q  456 ctgtcgcaaagttgtctagaataaaaattgtgaatc 491  Q
     ||||||||||||||||||| |||||||||||||||    
T  42076274 gtgtcgcaaagttgtctagactaaaaattgtgaatc 42076309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 262 - 413
Target Start/End: Original strand, 37233070 - 37233221
Alignment:
Q  262 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaa 361  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  37233070 gttactaattaaatttagtaacatttgagcaattgttaggtatagtccgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaa 37233169  T
Q  362 aaactgttacatatttatatttttgtaacactttttgtattactagtaacat 413  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  37233170 aaactatttcatatttatattttcgtaacactttttgtattactagtaacat 37233221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 17037545 - 17037732
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| |||||||  || ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |    
T  17037545 gtaacacttgaaaatcgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagtcagtgttactaaagagtt 17037644  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  17037645 ttagttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 17037732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 40402088 - 40401987
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 344  Q
    ||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  40402088 actaaataaagaaaaatgttactaattaaatttagttacgtttgaacaattgttaggtaaagtctgtgttgctaaaaagcttcagcaacattttatagta 40401989  T
Q  345 tt 346  Q
    ||    
T  40401988 tt 40401987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 9333660 - 9333560
Alignment:
Q  225 tgtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagc 324  Q
    ||||||||||||||| ||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9333660 tgtaacaattgaaaattgtaacaaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagtcgatgttactaaaaagc 9333561  T
Q  325 t 325  Q
    |    
T  9333560 t 9333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 5079162 - 5078975
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  5079162 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 5079063  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||| || ||  ||  || |||||||||||||||||| ||| ||||||    
T  5079062 ttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 5078975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 9354487 - 9354388
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||||||||||| ||| ||| ||| ||| ||| |||||||||||||||||| |||||||||| |||||||||||||||| || |||||||||||||||    
T  9354487 gtaacaattgaaaattgtaactgaatcaagaaaaatgttactaattaaatttaataacatttgagcaattgttaggtaaagcccatgttactaaaaagct 9354388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 352 - 491
Target Start/End: Complemental strand, 40390033 - 40389892
Alignment:
Q  352 taacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca-tnnnnnnntgtcacatatttataatttgagaagttgta 450  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |       ||||| || ||||||| ||| ||||||||     
T  40390033 taacattcaaaaactgttacatatttatatttttgtaacattttttgtattaccagtaacattaaaaaaatgtcagatttttataaattgtgaagttgt- 40389935  T
Q  451 aaaaactgtcgcaaagttgtcta--gaataaaaattgtgaatc 491  Q
    ||||| |||||||||||||||||  || |||||||||||||||    
T  40389934 aaaaagtgtcgcaaagttgtctatggactaaaaattgtgaatc 40389892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 19985016 - 19985119
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 344  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  ||||||||| || || ||| ||| |||||||||    
T  19985016 actaaatcaaggaaaatgttactaattagatttagtaacatttgaataattgttaggtaaagtccaggttactaaagagttttagttacattttatagta 19985115  T
Q  345 ttat 348  Q
    ||||    
T  19985116 ttat 19985119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 7410826 - 7410920
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| || |||| ||| ||||||| ||  ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  7410826 gtaacatttcaaaattgtaactaaatcaaaaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 7410920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 31069060 - 31068971
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttac 316  Q
    |||||| || |||| ||| ||||||| ||| ||| |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  31069060 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaaca-ttgaacaattgttaggtaaagcccgtgttac 31068971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 43475243 - 43475348
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 199  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||   ||||| ||| | |||||| ||||||| || || |||||||| |    
T  43475243 gtagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcaga 43475342  T
Q  200 tggagg 205  Q
    ||||||    
T  43475343 tggagg 43475348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 10869457 - 10869552
Alignment:
Q  244 tactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 340  Q
    |||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| | |||||||| || | | ||||||||||||    
T  10869457 tactaaatcatgaaaattgttactaattaaatttagtaacatttgaacaattgttaggtata-tccctcttactaaagagttacggtaacactttat 10869552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 228 - 348
Target Start/End: Original strand, 23679445 - 23679565
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||| | |||||| || ||||| |||| |||||| |||||||||||| || ||     
T  23679445 aacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagtttt 23679544  T
Q  328 agtaacactttatagtattat 348  Q
    ||| ||| |||||||||||||    
T  23679545 agttacattttatagtattat 23679565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 228 - 348
Target Start/End: Complemental strand, 23855366 - 23855246
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||| | |||||| || ||||| |||| |||||| |||||||||||| || ||     
T  23855366 aacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagtttt 23855267  T
Q  328 agtaacactttatagtattat 348  Q
    ||| ||| |||||||||||||    
T  23855266 agttacattttatagtattat 23855246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 37124520 - 37124618
Alignment:
Q  52 aaagactagatgagataagattaggaatgaaaatatta--gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||||||| || | ||||| |||||||| ||||  |||||||| ||||||||||||||| ||||||||| |||||| | ||||||||| |||||    
T  37124520 aaagactagatgaaatcatattagaaatgaaaaaattaaagagagtcggggtagcacctatagttgaaaagatgatggaaaataggcttaagtcatttg 37124618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 340
Target Start/End: Original strand, 30786269 - 30786383
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||| ||| ||| ||| ||||||| ||| |||||||||||||||||  ||||||||||||||  || ||||||||||||| |    
T  30786269 gtaacacttgaaaattgtaacttaatcaagaaaaatgttactgattcaatttagtaacatttgaataattgttaggtaaatgccttgttactaaaaagat 30786368  T
Q  326 tcagtaacactttat 340  Q
    | ||| ||| |||||    
T  30786369 ttagtcacattttat 30786383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 12042268 - 12042195
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaag 306  Q
    ||||||| ||| ||||||| ||| ||| ||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  12042268 ttgaaaattgtaactaaatcaagaaaaatgttactgattcaatttagtaacatttgaacaattgttaggtaaag 12042195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 18191947 - 18191886
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacattt 287  Q
    |||||||||||||| ||| ||||||| ||| ||| |||||||||||||||||||||||||||    
T  18191947 gtaacaattgaaaattgtaactaaattaagaaaaatgttactaattaaatttagtaacattt 18191886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 18191895 - 18191824
Alignment:
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatattt--atatttttgtaacacttttt 397  Q
    ||||||| || |||||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||    
T  18191895 agtaacatttaatagtattatcagtaacagttaaaaattgttacatatttatatatttttgtaacacttttt 18191824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 24178502 - 24178618
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||||||||| ||| ||||||||   || || |||||    
T  24178502 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacccgtagatgccgtggtaagaag 24178601  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  24178602 agtagatcaaatggagg 24178618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 38684959 - 38685075
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  38684959 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaagaag 38685058  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  38685059 agtagatcaaatggagg 38685075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 6888945 - 6889057
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagaga----gtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    |||||||||||||||| |||||| ||||| ||||||| |||    || | |||||||| |||||  |||||||||||||||| | |||||||||| ||||    
T  6888945 aagactagatgagatatgattagaaatgacaatattacagaaagagttggggtagcacgtatagaggaaaagatggtggaaaataggcttaagtggtttg 6889044  T
Q  149 gatatgtggagag 161  Q
    || |||| |||||    
T  6889045 gacatgtagagag 6889057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 10869759 - 10869846
Alignment:
Q  327 cagtaacactttatagtattatcaataacatttaaaaac-tgttacatatttatatttttgtaacactttttgtattactagtaacat 413  Q
    ||||||||||||||||||||| || ||| |   |||||  |||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10869759 cagtaacactttatagtattaccagtaagacacaaaaaaatgttacttatttgtatttttgtaacactttttgtatcactagtaacat 10869846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 4496376 - 4496492
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  4496376 agagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 4496475  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  4496476 agtagatcaaatggagg 4496492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 15588820 - 15588712
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    ||||| |||||||| ||||||||||||||||||| |||||| ||||||||| | ||| || || |||  | | ||||||||| | || || ||||||||     
T  15588820 ggtagtacctatagaagaaaagatggtggaaactaggcttaggtgatttgggtttgtagatagaagacacttggattttgtaataaggagagtagatcag 15588721  T
Q  199 atggagggt 207  Q
    |||||||||    
T  15588720 atggagggt 15588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 31636200 - 31636104
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagat 195  Q
    ||||||||||||||||||||||||||| |||||| | |||| ||| |||||  |||| ||||| ||| |||| ||| ||||||| || || ||||||    
T  31636200 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagat 31636104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 1275266 - 1275372
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||| ||   || || ||||| |||||||||    
T  1275266 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtaaatgccgtggtaagaagagtagatcaa 1275365  T
Q  199 atggagg 205  Q
    |||||||    
T  1275366 atggagg 1275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 4026664 - 4026532
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatatta---gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||  || || || || |   |||||| | |||| ||| || |||| ||||||||||||||||| | |||| ||| |||||    
T  4026664 aagactagatgagataagattaaaaacgagaacatgaagagagagttggggtaacacgtaaagtaaaaaagatggtggaaactagtcttaggtggtttgg 4026565  T
Q  150 atatgtggagaggagatccgtagattttgtagt 182  Q
    | |||| ||||||||| | ||||||| ||||||    
T  4026564 acatgtagagaggagacctgtagattctgtagt 4026532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 14667755 - 14667796
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  14667755 agagagttggggtagcacctatagtagaaaagatggtggaaa 14667796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 20456776 - 20456881
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 199  Q
    ||||||||||||||||||||| |||| |||| | ||||||  || |||| | |||| ||||| ||| ||||||||   || || ||||| ||||||||||    
T  20456776 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaa 20456875  T
Q  200 tggagg 205  Q
    ||||||    
T  20456876 tggagg 20456881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 1287869 - 1287753
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| |||  |||||||   || || |||||    
T  1287869 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgccgtggtaagaag 1287770  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  1287769 agtagatcaaatggagg 1287753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 7359549 - 7359434
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    |||||||  ||||| |||||||||||||||| |||||||||| | || ||| ||| |||||  |||| ||||| ||||  ||||||| |||||| || ||    
T  7359549 agagagttcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtggtttgg-catgtagagagaagatatgtagattctgtagtaaggag 7359451  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||||| |||||||    
T  7359450 agtagatcagatggagg 7359434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 12577149 - 12577078
Alignment:
Q  77 aatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||| || |||||||||| | |||||||||| ||||||||||||||||||||||| | |||| ||| |||||    
T  12577149 aatgacaacattagagagttg-ggtagcacctgtagtagaaaagatggtggaaactagacttatgtggtttgg 12577078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 15489782 - 15489666
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | ||||| |||||| |||||||||||||| ||||||| |||||  || |||||  |||| ||||| ||||  |||||||||||| | || ||    
T  15489782 agagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggag 15489683  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||| | |||||||    
T  15489682 agtagattagatggagg 15489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 41833907 - 41833832
Alignment:
Q  56 actagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatag--tagaaaagatggtggaa 129  Q
    |||| ||| |||| |||||||||||  ||||||||||||| | |||||||||||| |  |||||||||||||||||    
T  41833907 actatatgggataggattaggaatgttaatattagagagttggggtagcacctatggtatagaaaagatggtggaa 41833832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 14665706 - 14665821
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||| ||| || | |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  14665706 agagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaagaag 14665805  T
Q  189 ggtagatcaaatggag 204  Q
     |||||||||||||||    
T  14665806 agtagatcaaatggag 14665821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 16347658 - 16347583
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 174  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||    
T  16347658 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagat 16347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 33667209 - 33667268
Alignment:
Q  90 gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||| | ||||||||||||||||||||||||||| |||||| | |||| ||| |||||    
T  33667209 gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgg 33667268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 18351188 - 18351138
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||| ||||| |||||| |||||| ||| |||||    
T  18351188 ggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgg 18351138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 42199299 - 42199393
Alignment:
Q  110 tagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 204  Q
    ||||||||||||||||||||||| | |||| ||| |||||  |||| ||||| |||   ||||||| |||||| || || |||||||| ||||||    
T  42199299 tagtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggag 42199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 27895 - 27944
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||||||||||||||||||| |||||| | |||||| ||| ||||    
T  27895 ggtagcacctatagtagaaaagatgatggaaaataggcttaggtggtttg 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 79505 - 79546
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  79505 agagagttggggtagtacctatagtagaaaagatggtggaaa 79546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 219783 - 219693
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatatt----agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||| ||| |||||||||||| |||||| || |||    ||||||| | |||||||||||| || |||||| ||||||||||| ||||||    
T  219783 aagacaagacgagataagattacgaatgacaacattggagagagagttggggtagcacctatcgttgaaaaggtggtggaaacttggctta 219693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 1525651 - 1525752
Alignment:
Q  104 cacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgga 203  Q
    ||||||| |||||||||||||| |||||| | |||| |||  ||||| |||| ||||| ||| ||||  ||| || |||||| || |||||||| |||||    
T  1525651 cacctattgtagaaaagatggtagaaactagacttaggtggcttggacatgtagagagaagacccgtgaattctgcagttaggagagtagatcagatgga 1525750  T
Q  204 gg 205  Q
    ||    
T  1525751 gg 1525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 15168794 - 15168855
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggaga 160  Q
    ||||||||||||||||||||||||||| |||| | |||| | ||| |||||| |||| ||||    
T  15168794 ggtagcacctatagtagaaaagatggtagaaaataggctaaggtggtttggacatgttgaga 15168855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 37065519 - 37065564
Alignment:
Q  87 ttagagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||||||||  || ||||||||||||||||||||||||| ||||||    
T  37065519 ttagagagtttagatagcacctatagtagaaaagatggtagaaact 37065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 7e-49; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 232 - 395
Target Start/End: Complemental strand, 23264588 - 23264425
Alignment:
Q  232 attgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagta 331  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||| |    
T  23264588 attgaaaattgttactaaatcaagaaaattgttactaattaaatttagtaacattcgaacaattgttaggtaaaatccgtgttactaaagagcttcagca 23264489  T
Q  332 acactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttt 395  Q
    | |||||||||||||||||  |||| | ||||| |||||| ||||| |||||||||||||||||    
T  23264488 aaactttatagtattatcagaaacactaaaaaaatgttacttatttgtatttttgtaacacttt 23264425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 245 - 396
Target Start/End: Complemental strand, 4485644 - 4485493
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 344  Q
    ||||||| ||||||| || ||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||| || || ||||||| | ||||| |    
T  4485644 actaaatcaaggaaaatggtactaattaaatttagtaatatttgaataattgttaggtaaagtccgtgttattaaatagttttagtaacaatctatagaa 4485545  T
Q  345 ttatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 396  Q
    |||| | ||||||| ||||| |||| |||||||||||||||| |||||||||    
T  4485544 ttattagtaacattaaaaaaatgttgcatatttatatttttgcaacactttt 4485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 14669442 - 14669257
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | ||  ||||||||||||||||||||||||||||| || ||     
T  14669442 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaataattgttaggtaaagtccgtgttactaaagagtttt 14669343  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| |||||||||||||   ||||| ||||||| ||| ||| || ||| ||| |||||||||||||||||| ||||||||||    
T  14669342 agttacattttatagtattatttgtaacaattaaaaagtgtcacaaatgttacattattgtaacactttttgtatcactagtaaca 14669257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 226 - 408
Target Start/End: Original strand, 12591835 - 12592018
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| |||||||||||||||||  | || |||||||||||||||| ||||||||||||| || |    
T  12591835 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacgctcgaacaattgttaggtaaagcccgtgttactaaagagtt 12591934  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagt 408  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||    
T  12591935 ttagttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagt 12592018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 17719819 - 17719634
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||| ||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  17719819 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaatttttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 17719720  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  17719719 agttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 17719634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 16734807 - 16734930
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||  | |    
T  16734807 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacatttgaacaattgttaggtaaagcccgtgttactaaagtgtt 16734906  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  16734907 ttagttacattttatagtactatc 16734930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 405
Target Start/End: Original strand, 34374827 - 34375011
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa--ttgttaggtaaagtccgtgttactaaaaag 323  Q
    ||||||||| |||| ||| | ||||| ||| ||| |||||||||||| |||| ||||||||||| |||  |||||||| ||| || ||||||||||| ||    
T  34374827 gtaacaattaaaaaatgtaattaaatcaagaaaaatgttactaattatattttgtaacatttgaacaaaattgttaggcaaaatctgtgttactaaagag 34374926  T
Q  324 cttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata---tttttgtaacactttttgtattact 405  Q
     || ||||| | ||||||||||||| | ||||||| | ||| |||||| | ||||||   ||||| |||||||||||||||||||    
T  34374927 tttgagtaatattttatagtattatgagtaacattcataaagtgttacttgtttatatattttttttaacactttttgtattact 34375011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 349
Target Start/End: Complemental strand, 11936865 - 11936742
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | |    
T  11936865 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgtt 11936766  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  11936765 ttagttacattttatagtactatc 11936742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 15361717 - 15361840
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||| | |    
T  15361717 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgtt 15361816  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  15361817 ttagttacattttatagtactatc 15361840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 225 - 340
Target Start/End: Complemental strand, 29668016 - 29667899
Alignment:
Q  225 tgtaacaattgaaaactgttactaaat--aaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaa 322  Q
    ||||||||||||||| ||| || ||||  |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||   |||||| |||| |    
T  29668016 tgtaacaattgaaaattgtaacgaaatcaaaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagcttgtgttattaaaga 29667917  T
Q  323 gcttcagtaacactttat 340  Q
    | || ||||||| |||||    
T  29667916 gatttagtaacattttat 29667899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 6684096 - 6684289
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| || |||| ||| ||| ||| ||| ||| |||||||||||||||||||||||| | || || |||||||||||||||| |||||||||| || |    
T  6684096 gtaacacttaaaaattgtaacttaatcaagaaaaatgttactaattaaatttagtaacactcgaaca-ttgttaggtaaagtccatgttactaaagagtt 6684194  T
Q  326 tcagtaacactttatag-------tattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| |||||||       ||||||| |||||| ||||||| |||  || || ||||||| ||||||||||| |||||| ||||||||||    
T  6684195 ttagttacattttatagtattatctattatctataacaattaaaaagtgtcgcaaatgttatattattgtaacacttcttgtatcactagtaaca 6684289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 11948835 - 11948722
Alignment:
Q  236 aaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacac 335  Q
    |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | || ||| |||     
T  11948835 aaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacat 11948736  T
Q  336 tttatagtattatc 349  Q
    ||||||||| ||||    
T  11948735 tttatagtactatc 11948722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 5258438 - 5258322
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| |||||||||  || || |||||    
T  5258438 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagattccgttgtaagaag 5258339  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  5258338 agtagatcaaatggagg 5258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 257 - 412
Target Start/End: Original strand, 10070688 - 10070843
Alignment:
Q  257 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 356  Q
    |||||||||||||||||||||| ||||| |  |  |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||||||||   |||||    
T  10070688 aaattgttactaattaaatttaataacactcaaataattgttacgtaaagtccgtgttact-aaaagttttagttacattttatagtattatttgtaaca 10070786  T
Q  357 tttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
     || |||| |||  || || ||| ||| |||||||||||||||||| | ||||||||    
T  10070787 atttaaaagtgtcgcaaatgttacattattgtaacactttttgtatcattagtaaca 10070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 349
Target Start/End: Complemental strand, 23904450 - 23904328
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| || |||||||| ||| |||  |||||||| | ||||||||||||||||| |||||||||||||||| || | |||| ||| || |    
T  23904450 gtaacacttgaaaattgctactaaatgaagaaaaaagttactaaatcaatttagtaacatttgaacaattgttaggtaaagcccctcttacaaaagaggt 23904351  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | | | ||||||||||||||||||    
T  23904350 tta-ttacactttatagtattatc 23904328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 21870369 - 21870303
Alignment:
Q  83 aatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  21870369 aatattagagagttggggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgg 21870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 31818490 - 31818565
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    |||| |||||||||||||||||| ||||||| ||||  ||||||| |||||||||||||||| |||| ||||||||||    
T  31818490 aagattagatgagataagattagaaatgaaattatt--agagtcggggtagcacctatagtacaaaaaatggtggaaa 31818565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 2079264 - 2079425
Alignment:
Q  25 atgttgtgttggacgtgtggcaagagtaaagactagatgagataagat-taggaatgaaaatattagagagtcgag----gtagcacctatagtagaaaa 119  Q
    ||||||||||||| |||||| ||  |  ||||||| |||||||| ||| ||| ||||| ||||||||||||  |||    |||||| |||||||||||||    
T  2079264 atgttgtgttggatgtgtggtaactggtaagactaaatgagatatgatatagaaatgacaatattagagagg-gagttgggtagcatctatagtagaaaa 2079362  T
Q  120 gatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||||||| | |||||||||| ||| | ||||| ||||| ||||  ||||||| ||||||    
T  2079363 gatggtggaaaataggcttaagtggtttaggtatgtagagagaagatttgtagattatgtagt 2079425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 9631253 - 9631161
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttacta 318  Q
    |||||| ||||||||| ||||||||| ||| | |  |||||||| ||||||||||||||||||| ||||||||||| | || || ||||||||    
T  9631253 gtaacacttgaaaactattactaaatcaagaagaacgttactaagtaaatttagtaacatttgaacaattgttaggcatagcccctgttacta 9631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 15690440 - 15690529
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgtta 315  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||| |  | |||||||||| |||||||| |||||    
T  15690440 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtgacactcaaacaattgttagctaaagtccatgtta 15690529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 321
Target Start/End: Original strand, 2941043 - 2941103
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaa 321  Q
    ||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||||||||    
T  2941043 tgttactaattatgtttagtaacatttgagcaaatgttaggtaaagtttgtgttactaaaa 2941103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 8364528 - 8364624
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||| |||| |||||| ||||| ||||||||| ||| |  |||||| |||||||||||||| |||| |||| | |||||| ||| |||||    
T  8364528 aagactagatgggataggattagaaatgacaatattagacagttggagtagcaactatagtagaaaaggtggttgaaaataggcttaggtggtttgg 8364624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 12134265 - 12134141
Alignment:
Q  12 agcagagatgggaatgttgtgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacc 107  Q
    |||||||||| ||||||||||||||| |||||||||||       | |||||| |||  ||||| ||||| ||||||||||||    | ||||||  |||    
T  12134265 agcagagatgagaatgttgtgttggatgtgtggcaaga-------caagatgatatagaattagaaatgacaatattagagagagaattgaggtacgacc 12134173  T
Q  108 tatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||||||||||||||||||| | ||||||    
T  12134172 tatagtagaaaagatggtggaaaataggctta 12134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 6641739 - 6641656
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagaga----gtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||||||| ||||||||| | ||||| |||||||||||    || | |||| |||||||||||||||||||||| ||||||    
T  6641739 aagactagatgggataagattggaaatgacaatattagagatagagttggggtatcacctatagtagaaaagatggtagaaact 6641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 396
Target Start/End: Complemental strand, 6673716 - 6673550
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||  ||||||||||||| ||    ||||||||| ||||  ||||||||||||| | |     
T  6673716 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaa-aaatttagtaacagttcgttaattgttag-taaaacccgtgttactaaaca-ca 6673620  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 396  Q
    |||||||||| |||| ||||| | | ||||||| ||||| ||||   |||||||| |||||||||||||||    
T  6673619 tcagtaacacgttat-gtatttttagtaacattaaaaaaatgttgtctatttatacttttgtaacactttt 6673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 14389457 - 14389415
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaac 131  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  14389457 agagagttgaggtagcacctatcgtagaaaagatggtggaaac 14389415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 383
Target Start/End: Complemental strand, 27969980 - 27969858
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacattta 360  Q
    |||||||| || ||||||| ||||||| | ||| ||||||||||||||  |||||||||||  |||||  |||| |||    |||||||||||||||||     
T  27969980 tgttactatttcaatttagcaacatttcaacaaatgttaggtaaagtctatgttactaaaagacttcaacaacatttttgcatattatcaataacatttg 27969881  T
Q  361 aaaactgttacatatttatattt 383  Q
      ||||||||||| | |||||||    
T  27969880 ttaactgttacatgtctatattt 27969858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 30031258 - 30031364
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  ||| ||||| |||| ||||| ||| || |||||   || || ||||| |||||||||    
T  30031258 ggtagcacctatagtagaaaagttggtagaaaataggcttagatgagttggacatgtagagagaagacccatagatgccgtcgtaagaagagtagatcaa 30031357  T
Q  199 atggagg 205  Q
    |||||||    
T  30031358 atggagg 30031364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 363
Target Start/End: Original strand, 1942571 - 1942708
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| |||| || ||| ||||||| ||| ||| | ||||| || ||||||| |||||||||| |||||| ||||||||  |  ||||| |||| | ||    
T  1942571 gtaacatttgataattgtaactaaatcaagaaaaatattactgataaaatttaataacatttgagcaattgctaggtaaaacctttgttattaaatatct 1942670  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaa 363  Q
    | ||| ||| ||||||||||||||  ||||| ||||||    
T  1942671 ttagttacattttatagtattatctgtaacaattaaaa 1942708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 30481311 - 30481218
Alignment:
Q  241 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaaca 334  Q
    ||||||||||| ||| ||| |||| |||||||||| |||||||| |||| ||| | |||| |||||  | |||||||||| ||||||| |||||    
T  30481311 tgttactaaatcaagaaaaatgttgctaattaaatctagtaacaattgaacaaattttagataaagatcatgttactaaagagcttcaataaca 30481218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 21352127 - 21352055
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 161  Q
    ||||||| |||||||||||||||||||||||  |||| |||| | ||||||  ||||||||| |||| |||||    
T  21352127 agagagtggaggtagcacctatagtagaaaaattggtagaaaataggcttagatgatttggacatgtagagag 21352055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 30679417 - 30679513
Alignment:
Q  108 tatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 204  Q
    ||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||||||| |||||||| | || || ||||  |||||||||||||||    
T  30679417 tatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagaggagacccgtagatgtcgtcgtaagaatagtagatcaaatggag 30679513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 32755913 - 32756029
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||| | ||| ||| |||| | ||| | |||||    
T  32755913 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgtagagggaagacccgaagatgtcgtaataagaag 32756012  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  32756013 agtagatcaaatggagg 32756029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 7601396 - 7601338
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||||| ||| || | |||||||||||| ||| |||||||||||||||||||||||||    
T  7601396 tgttactatttagatcttgtaacatttgacaaat-gttaggtaaagtccgtgttactaaa 7601338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 28085368 - 28085483
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||| ||   || || |||||    
T  28085368 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtaaataaagtggtaagaag 28085467  T
Q  189 ggtagatcaaatggag 204  Q
     |||||||||||||||    
T  28085468 agtagatcaaatggag 28085483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 31832140 - 31832033
Alignment:
Q  98 aggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatca 197  Q
    ||||||||||||||||| || |||||||||  | | |||||||||| |||||| |||| ||||| || |||| ||||| | |||  || || ||||||||    
T  31832140 aggtagcacctatagtaaaatagatggtgggtattaggcttaagtggtttggacatgtagagagaaggtccggagattatatagcaagtagagtagatca 31832041  T
Q  198 aatggagg 205  Q
     |||||||    
T  31832040 gatggagg 31832033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 9593986 - 9593880
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||  |||||||||||||||| |||| | |||||| ||| |||||  |||| ||||| |||   ||||||  |||||| ||||| ||||||||     
T  9593986 ggtagcaccattagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcag 9593887  T
Q  199 atggagg 205  Q
    |||||||    
T  9593886 atggagg 9593880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 10935862 - 10935800
Alignment:
Q  243 ttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaa 305  Q
    ||||||||| | | ||| |||||||||||| ||  |||||||||||| |||||||||||||||    
T  10935862 ttactaaatcatgaaaaatgttactaattatatccagtaacatttgaacaattgttaggtaaa 10935800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 30129697 - 30129611
Alignment:
Q  311 tgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttttt 397  Q
    |||||||||| | ||||||||||| |||| ||| |||    |||| |||||||| |||||| || |||||||||| |||||||||||    
T  30129697 tgttactaaagaccttcagtaacattttacagtcttactggtaacttttaaaaaatgttacttagttatatttttctaacacttttt 30129611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 5897480 - 5897521
Alignment:
Q  108 tatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||| | |||||||||| |||||    
T  5897480 tatagtagaaaagatggtggaaaataggcttaagtggtttgg 5897521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 6907103 - 6906990
Alignment:
Q  103 gcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgg 202  Q
    ||||||||||||||| |||||||   |||| |||||| ||  ||||| ||||| ||||| |||   |||||||||||||| || || |||||||| |||     
T  6907103 gcacctatagtagaatagatggtcagaactaggcttacgtagtttggttatgtagagagaagacatgtagattttgtagtaaggagagtagatcagatgc 6907004  T
Q  203 agggttgtccaatc 216  Q
    ||||| ||| ||||    
T  6907003 agggtagtcaaatc 6906990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 437 - 482
Target Start/End: Original strand, 12592048 - 12592092
Alignment:
Q  437 tttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaaa 482  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||    
T  12592048 tttgagaagttgtaaaaag-tgtcgcaaatttgtctagaataaaaa 12592092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 24665818 - 24665911
Alignment:
Q  105 acctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtaga-ttttgtagttagaagggtagatca 197  Q
    ||||||||||||||| ||||| |||| | |||||| ||| |||||| |||| ||||| ||| | ||||| ||||||||| || || ||||||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatca 24665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 4e-44; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 226 - 481
Target Start/End: Original strand, 6403595 - 6403849
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||||||||||  ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  6403595 gtaacaattgaaatttgtaactaaattaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagcccgtgttattaaaaagct 6403694  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca-tnnnnnnntgtc 424  Q
    ||||||||| ||||||  || ||   ||||| | ||||| |||| |||||||||| |||||||||| ||||||||| || ||||||| |       ||||    
T  6403695 tcagtaacattttatatcataat-tgtaacagtaaaaaaatgttgcatatttata-ttttgtaacattttttgtatgaccagtaacactaaaaaaatgtc 6403792  T
Q  425 acatatttataatttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaa 481  Q
    |||| | |||  ||||| ||||||||||||| ||||||||||| ||||||| |||||    
T  6403793 acatttatattttttgaaaagttgtaaaaaagtgtcgcaaagtcgtctagactaaaa 6403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 229 - 491
Target Start/End: Original strand, 5000684 - 5000948
Alignment:
Q  229 acaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttca 328  Q
    ||||||||||| |||||||| || |   ||||||||||||||||||||||||||||||||| |||| ||||||| ||  | ||||||||||| ||||  |    
T  5000684 acaattgaaaattgttactacatcatcaaaattgttactaattaaatttagtaacatttgagcaatagttaggtgaaacctgtgttactaaagagctaga 5000783  T
Q  329 gtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaacat-nnnnnnntgtcaca 427  Q
    |||| || |||||||||||||| ||||| |  |||| |||||| ||||| || ||| |||||||||||||||| ||  |||||||        |||||||    
T  5000784 gtaagacgttatagtattatcagtaacactcgaaaaatgttacttatttgtactttggtaacactttttgtatcacgggtaacatgaaaaaaatgtcaca 5000883  T
Q  428 tatttataa-tttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaa-aattgtgaatc 491  Q
     |||||||| ||||||| ||||| |||||  |||||||||||||||||| |||| |||||||||||    
T  5000884 catttataattttgagatgttgt-aaaaagagtcgcaaagttgtctagactaaacaattgtgaatc 5000948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 226 - 401
Target Start/End: Original strand, 31347351 - 31347525
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||||||||||| ||| || |||| ||| ||| || |||||||||||||||||||||||||| |||||||||| ||||  | ||||||||||  | ||    
T  31347351 gtaacaattgaaaattgtaaccaaatcaagaaaaatgctactaattaaatttagtaacatttgatcaattgttagataaatcctgtgttactaaccatct 31347450  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtat 401  Q
    ||||||||| ||||||  |||||   ||||| | ||||| ||||||||||||||| ||||||||||||||||||||    
T  31347451 tcagtaacattttatatcattatttgtaacaataaaaaaatgttacatatttata-ttttgtaacactttttgtat 31347525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 19370006 - 19369821
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19370006 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19369907  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19369906 agttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19369821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 228 - 412
Target Start/End: Original strand, 19448452 - 19448637
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19448452 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19448551  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| | | ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19448552 agttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19448637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 19532624 - 19532439
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19532624 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19532525  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| | | ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19532524 agttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19532439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 25637646 - 25637832
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||| |  |    
T  25637646 gtaacacttgaaaattgtaactaaattaagaaaactgttactaattaaatttagcaacactcgaacaattgttaggtaaagcccgtgttactaaagaatt 25637745  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| |||||||||||||   ||||| ||||||| |||| || ||  || ||| |||||||||||||||||| ||||||||||    
T  25637746 ttagttacattttatagtattat-tgtaacaattaaaaagtgttgcaaatgctacattattgtaacactttttgtatcactagtaaca 25637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 226 - 401
Target Start/End: Complemental strand, 5651043 - 5650866
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||||| ||||||||| ||| ||| ||||||||||| ||||||| ||||||||| |||||||||||||||  || |||||| ||||||||    
T  5651043 gtaacacttgaaaactattactaaatcaagaaaaatgttactaattcaatttagcaacatttgaacaattgttaggtaaaacccttgttacaaaaaagct 5650944  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacata--tttatatttttgtaacactttttgtat 401  Q
    | |||  || ||||| |||||||| |||||||| ||| | ||| ||| |   ||| ||| ||||||||||||||||||    
T  5650943 ttagttgcattttatggtattatctataacattcaaatagtgtcacaaaatgttacattattgtaacactttttgtat 5650866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 6801928 - 6801790
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||||| ||||||||| ||  ||| |||||||||||||||||||||||| |||| |||||||||||||||| || |||||||||| || |    
T  6801928 gtaacacttgaaaactattactaaatcaataaaaatgttactaattaaatttagtaacagttgaacaattgttaggtaaagcccctgttactaaagagtt 6801829  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaa 364  Q
    | ||| ||| |||| ||||||| |  ||||||| |||||    
T  6801828 ttagttacattttagagtattagctgtaacattaaaaaa 6801790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 29553631 - 29553732
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||||||||||| ||| || |||| ||| ||| ||||||||||||||||||| ||||||||| |||||||||| |||||  |||||||||||||||||    
T  29553631 gtaacaattgaaaattgtaaccaaatcaagaaaaatgttactaattaaatttagcaacatttgagcaattgttagttaaagcgcgtgttactaaaaagct 29553730  T
Q  326 tc 327  Q
    ||    
T  29553731 tc 29553732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 10824490 - 10824338
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggata 152  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||||| |||| | |||||| ||| ||||| ||    
T  10824490 aagactagatgggatatgattagaaataaaaatattagagagttgaggcagcacctaaagtagaaaagatggtcgaaaataggcttaggtggtttgggta 10824391  T
Q  153 tgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
    | | ||||  |||  | |||||||||||||  | || ||||||||||||||||    
T  10824390 tttagagaaaagactcatagattttgtagtatggagagtagatcaaatggagg 10824338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 5528745 - 5528932
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |  | |||||||||| ||||||| ||||||||||| || |    
T  5528745 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacactcaaacaattgttagataaagtctgtgttactaaagagtt 5528844  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| |||| |||||||||  ||||| ||||||| |||  || || | | ||| |||||||||||||||||| | ||||||||    
T  5528845 ttagttacattttacagtattatctgtaacagttaaaaagtgtcgcaaatataacattattgtaacactttttgtatcattagtaaca 5528932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 29700233 - 29700328
Alignment:
Q  54 agactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||| ||||| | |||||| ||| |||||    
T  29700233 agactagatgagataggattagaaatgaaaatgttagagagttggggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgg 29700328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 349
Target Start/End: Complemental strand, 45356210 - 45356087
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  45356210 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 45356111  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  45356110 ttagttacattttatagtactatc 45356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 28249173 - 28249079
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  28249173 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 36143321 - 36143398
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  36143321 aagactagatgagataggattagaaaggaaaagattagagagtcgaggtagcacctatagcagaatagatggtggaaa 36143398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 226 - 401
Target Start/End: Complemental strand, 17634569 - 17634393
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||||||||||| ||||| |||| |||||| ||||||||| ||||||||||||| |  |    
T  17634569 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttaataacacttgaacaattgataggtaaagcccgtgttactaaagaaat 17634470  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtat 401  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| ||| |||||||||||| |||||    
T  17634469 ttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatattacattattgtaacactttatgtat 17634393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 228 - 412
Target Start/End: Original strand, 18766921 - 18767106
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| | ||| ||||||||||| | |||| |  | ||||||||||||||||| |||||||||||| || ||     
T  18766921 aacacttgaaaattgtaactaaatcaagaaaaatattattaattaaattttgcaacactcaaacaattgttaggtaaagtacgtgttactaaagagtttt 18767020  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| |||||||||||||  | |||| ||||||| ||| | | || ||| ||| |||||||| ||||||||| ||||||||||    
T  18767021 agttacattttatagtattatatagaacaattaaaaagtgtcataaatgttacattattgtaacattttttgtatcactagtaaca 18767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 25638809 - 25638932
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||  || ||||||||||  | |    
T  25638809 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaaacccatgttactaaagtgtt 25638908  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  25638909 ttagttacattttatagtactatc 25638932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 348
Target Start/End: Original strand, 29345433 - 29345556
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa-aagc 324  Q
    |||||| | ||||| ||| ||||||| ||| ||| | ||||||||||||||||||||| ||||| |||||||||||||||| || | |||||||| || |    
T  29345433 gtaacactcgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacctttgaacaattgttaggtaaagcccctcttactaaacaaac 29345532  T
Q  325 ttcagtaacactttatagtattat 348  Q
    || ||| ||| |||||||||||||    
T  29345533 tttagttacattttatagtattat 29345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 262 - 348
Target Start/End: Original strand, 6223439 - 6223525
Alignment:
Q  262 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 348  Q
    |||||| ||||||||||||||||||||   |||||||||||||||  |||||||||||| || || ||| |||||||||| ||||||    
T  6223439 gttactgattaaatttagtaacatttgtaaaattgttaggtaaagcgcgtgttactaaagagttttagttacactttataatattat 6223525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 9695633 - 9695683
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9695633 ggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgg 9695683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 33511312 - 33511378
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaa 119  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| | |||| ||||||| ||||||||    
T  33511312 aagactatatgagatatgattagaaatgaaaatattagagagttggggtaacacctatggtagaaaa 33511378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 2776509 - 2776433
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagatt 175  Q
    |||||||||||| ||||||| |||||| ||||||||||||| ||| |||||  |||| ||||| ||| |||||||||    
T  2776509 ggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaagacccgtagatt 2776433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 206
Target Start/End: Complemental strand, 10080235 - 10080080
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatatt----agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||| ||||||||||||| ||||| || |||    ||||||| ||||||||| ||| |||||||||||||||||||||| ||| | | || ||||    
T  10080235 aagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcatcta-agtagaaaagatggtggaaactaggcctga-tggtttg 10080138  T
Q  149 gatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggaggg 206  Q
    |  |||| ||||| ||| | |  ||||||||||| || || |||||||||||| ||||    
T  10080137 ggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggg 10080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 36565531 - 36565415
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| | | ||||||||   || || |||||    
T  36565531 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacccgtagatgccgtggtaagaag 36565432  T
Q  189 ggtagatcaaatggagg 205  Q
    |||||||||||||||||    
T  36565431 ggtagatcaaatggagg 36565415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 41444606 - 41444550
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 155  Q
    |||||||||||||||||||||||||||||||||| || ||| ||| |||||| ||||    
T  41444606 ggtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgt 41444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 44681369 - 44681288
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtc----gaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||||| ||||||||||||| ||||| || ||||||||| |    | ||||||||||||| ||||||||||||||||||    
T  44681369 aagactagacgagataagattagaaatgacaacattagagagacagttgtggtagcacctataatagaaaagatggtggaaa 44681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 364
Target Start/End: Original strand, 14997630 - 14997761
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 332  Q
    ||||||| | ||||||| | ||| ||| |||||||  ||||| |||||||||||||   ||||||||||||||  || |||||||||| ||||| ||| |    
T  14997630 ttgaaaattattactaattcaagaaaaatgttactggttaaaattagtaacatttgtagaattgttaggtaaaacccatgttactaaagagctttagtta 14997729  T
Q  333 cactttatagtattatcaataacatttaaaaa 364  Q
    |  |||||||||||| |  ||||||| |||||    
T  14997730 ccttttatagtattaactgtaacattcaaaaa 14997761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 45419191 - 45419265
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggt 125  Q
    ||||||||| | ||||||||||||||||| |  |||||||||  | | |||||||||||||||||||||||||||    
T  45419191 aagactagaagggataagattaggaatgacaccattagagagaattggggtagcacctatagtagaaaagatggt 45419265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 18474262 - 18474200
Alignment:
Q  77 aatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||| |||||||||||||    ||||||||||||||||||| ||||||||||||| ||||||    
T  18474262 aatgacaatattagagagttagagtagcacctatagtagaaatgatggtggaaactaggctta 18474200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 31369169 - 31369072
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatt 358  Q
    ||||||||||||| |||||| |||||| | ||| ||||| ||||||    |||||||||| || |||||| ||| ||||||| ||||||||| |||||    
T  31369169 tgttactaattaagtttagtgacatttaaacaaatgttatgtaaagcttatgttactaaagagtttcagttacattttataggattatcaatcacatt 31369072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 12611538 - 12611586
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  12611538 gtagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttg 12611586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 18125165 - 18125281
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||| | |||| ||||| ||| ||||||||   || || ||||     
T  18125165 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtcgtaagaat 18125264  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  18125265 agtagatcaaatggagg 18125281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 36545141 - 36545257
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||| ||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  36545141 agagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 36545240  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  36545241 agtagatcaaatggagg 36545257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 40813316 - 40813432
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| ||||| ||||||   || || |||||    
T  40813316 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagatctgtagatgccgtggtaagaag 40813415  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  40813416 agtagatcaaatggagg 40813432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 42493596 - 42493536
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| | |||| ||||||||||||||||||| ||||||||| |||||| ||| |||||    
T  42493596 agagagttggggtaacacctatagtagaaaagattgtggaaactaggcttaggtggtttgg 42493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 16705714 - 16705847
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg- 149  Q
    ||||||||||| ||||  ||||| ||||| || |||||||||  | |  |||||| |||||||| ||||||||||||| ||| |||||||||  |||||     
T  16705714 aagactagatgggatagaattagaaatgacaacattagagagagttggagtagcatctatagtaaaaaagatggtggagactaggcttaagtagtttggg 16705813  T
Q  150 -atatgtggagaggagatccgtagattttgtagt 182  Q
     |||||| ||||| ||| | ||| ||||||||||    
T  16705814 catatgtagagagaagacctgtatattttgtagt 16705847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 25985511 - 25985554
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||    
T  25985511 agagagttggggtagcacctatagtagaaaagatggtagaaact 25985554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 38667473 - 38667504
Alignment:
Q  13 gcagagatgggaatgttgtgttggacgtgtgg 44  Q
    ||||||||||||||||||||||||||||||||    
T  38667473 gcagagatgggaatgttgtgttggacgtgtgg 38667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 7103274 - 7103312
Alignment:
Q  101 tagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  7103274 tagcacctatagtagaaaagatggtagaaactaggctta 7103312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 12491418 - 12491316
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||| |||||||||    
T  12491418 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaa 12491319  T
Q  199 atg 201  Q
    |||    
T  12491318 atg 12491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 39946859 - 39946965
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| || || ||| | ||||||   || || ||||| |||||||||    
T  39946859 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacctgtagatgccgtcgtaagaagagtagatcaa 39946958  T
Q  199 atggagg 205  Q
    |||||||    
T  39946959 atggagg 39946965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 44373740 - 44373827
Alignment:
Q  65 gataagattaggaatgaaaatattagag----agtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    |||| |||||| ||||||||||||||||    ||| |  |||||||||| |||||||||||||||||||| | ||||| |||| ||||    
T  44373740 gataggattagaaatgaaaatattagagtgagagttggagtagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttg 44373827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 6483268 - 6483341
Alignment:
Q  108 tatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtag 181  Q
    |||||||||||||| |||||||||| |||||| ||| |||||  |||| ||| | || |||| |||||||||||    
T  6483268 tatagtagaaaagagggtggaaacttggcttaggtggtttgggcatgtagagggaagttccggagattttgtag 6483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 13171939 - 13171898
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | || |||||||||||||||||||||||||||||    
T  13171939 agagagttggggaagcacctatagtagaaaagatggtggaaa 13171898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 36395240 - 36395123
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaag-tgatttggatatgtggagaggagatccgtagattttgtagttagaa 187  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||| || || |||||  |||| ||||| ||| | ||||||   || || ||||    
T  36395240 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggctttagatggtttgggcatgtagagagaagacctgtagatgccgtggtaagaa 36395141  T
Q  188 gggtagatcaaatggagg 205  Q
    | ||||||||||||||||    
T  36395140 gagtagatcaaatggagg 36395123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 2e-43; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 226 - 396
Target Start/End: Original strand, 26707861 - 26708031
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| |||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| || |    
T  26707861 gtaacatttgaaaatggttactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagtctctgttactaaagaggt 26707960  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 396  Q
    ||||||||| || |||||||| ||| ||||| | ||||||||||  ||||| |||||||||||||||||||    
T  26707961 tcagtaacatttcatagtattctcagtaacagtaaaaaactgttgtatattcatatttttgtaacactttt 26708031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 228 - 341
Target Start/End: Complemental strand, 16457427 - 16457314
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||||||||||| ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  16457427 aacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagctcgtgttactaaaaagcttc 16457328  T
Q  328 agtaacactttata 341  Q
    ||||||| ||||||    
T  16457327 agtaacattttata 16457314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 271 - 396
Target Start/End: Original strand, 26735681 - 26735806
Alignment:
Q  271 taaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgtta 370  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||| ||||| || |||||||||| | ||||||| ||||||||||     
T  26735681 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagcttcaataacatttcatagtattattagtaacattaaaaaactgttg 26735780  T
Q  371 catatttatatttttgtaacactttt 396  Q
     ||||| |||||||||||||||||||    
T  26735781 tatattcatatttttgtaacactttt 26735806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 1628045 - 1627857
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| | |||||||||||||||||||||| |||| ||||||||| |||||||||||||||| ||| || |    
T  1628045 gtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacttgaacaattgttaagtaaagtccgtgttacaaaagagtt 1627946  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatt-tttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| |||||||||||||   ||||| ||||||| |||  || || ||| ||| ||||||| ||||||| ||| ||||||||||    
T  1627945 ttagttacattttatagtattatatgtaacaattaaaaagtgtcgcaaatgttacattatttgtaatactttttatatcactagtaaca 1627857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 247 - 412
Target Start/End: Complemental strand, 2943291 - 2943126
Alignment:
Q  247 taaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtatt 346  Q
    ||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||  | || ||| ||| |||||||||||    
T  2943291 taaatcaagaaaaatgttactaattaaatttagtaacattcgaacaattgttaggttaagcccgtgttactaaagtgttttagttacattttatagtatt 2943192  T
Q  347 atcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca 412  Q
    |||  ||||| ||||||| |||  ||   ||| | | |||||||||||||||||| ||| ||||||    
T  2943191 atctgtaacaattaaaaagtgtcgcaatgttacactattgtaacactttttgtatcactggtaaca 2943126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 329
Target Start/End: Complemental strand, 1613311 - 1613208
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||||||| || |||||||||| ||||    
T  1613311 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtaacagttgaccaatttttaggtaaagcccctgttactaaatagct 1613212  T
Q  326 tcag 329  Q
    ||||    
T  1613211 tcag 1613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 7407852 - 7407665
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| | ||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  7407852 gtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 7407753  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||| ||||| | ||||| |||  || ||  ||  || |||||||||||||||||| ||| ||||||    
T  7407752 ttagttacattttatagtactatcagtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 7407665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 228 - 349
Target Start/End: Original strand, 13845996 - 13846117
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | ||     
T  13845996 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtttt 13846095  T
Q  328 agtaacactttatagtattatc 349  Q
    ||| ||| ||||||||| ||||    
T  13846096 agttacattttatagtactatc 13846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 2550168 - 2550262
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||    
T  2550168 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcctgtgttactaaa 2550262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 27259543 - 27259474
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaatt 295  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||| |||||    
T  27259543 gtaacaattgaaaactattactaaatcaagcaaaatgttactaattaaatttagtaacatttgaacaatt 27259474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 36820289 - 36820133
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgga 150  Q
    ||||||||| |||||| |||||| |||||  | |||||||||  | | ||||||||||||| ||| |||||||||||||||| |||||| ||| ||| ||    
T  36820289 aagactagacgagataggattagaaatgacgacattagagagagttggggtagcacctatattagcaaagatggtggaaactaggcttaggtggtttaga 36820190  T
Q  151 tatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagggt 207  Q
     ||||  |||| ||| || |||||| |||||| || |||||||||||||| ||||||    
T  36820189 catgtaaagagaagacccatagattatgtagtaaggagggtagatcaaatagagggt 36820133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 264 - 348
Target Start/End: Original strand, 36035329 - 36035413
Alignment:
Q  264 tactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 348  Q
    ||||||||||||||||||||| |||  ||||||||||||||||  |||||||||||| ||||| ||| ||| |||||||||||||    
T  36035329 tactaattaaatttagtaacaattgtacaattgttaggtaaagctcgtgttactaaagagctttagttacattttatagtattat 36035413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 1654578 - 1654701
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||||||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| ||||||||| |||||| | |||||| ||||  | |    
T  1654578 gtaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaagtaaagcctgtgttattaaagtgtt 1654677  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  1654678 ttagttacattttatagtactatc 1654701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 5498480 - 5498668
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    ||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||||||||| | ||| |||||||||||||||  |  |||||||||| || |    
T  5498480 gtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacttctgaacaattgttaggtaaaacctatgttactaaagagtt 5498579  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata---tttttgtaacactttttgtattactagtaaca 412  Q
    |  |||| | ||||| ||||||| | ||||||| | ||| | |||| | ||||||   ||||||||||||||| | ||||||| ||||||    
T  5498580 ttggtaatattttat-gtattattagtaacattcataaagtattacttgtttatattttttttgtaacactttatatattactggtaaca 5498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 9633540 - 9633446
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||||| |||||||||  |  ||| |||||||||||||||||||| |||||| | |||||||||||||||| || ||||||||||    
T  9633540 gtaacacttgaaaactattactaaatcgaaaaaaatgttactaattaaatttagttacatttaaacaattgttaggtaaagcccctgttactaaa 9633446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 41842791 - 41842685
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||||||||||||||  | |||| ||| ||||| ||||| ||||| ||| | ||||||| |||||| |  || |||||||||    
T  41842791 ggtagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaa 41842692  T
Q  199 atggagg 205  Q
    |||||||    
T  41842691 atggagg 41842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 47233878 - 47233770
Alignment:
Q  97 gaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatc 196  Q
    |||||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || |||||||| |||||||    
T  47233878 gaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagagtagatc 47233779  T
Q  197 aaatggagg 205  Q
    |||||||||    
T  47233778 aaatggagg 47233770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 31337806 - 31337757
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  31337806 ggtagcacctatagtagaaaagatggttgaaactaggcttaagtggtttg 31337757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 26490309 - 26490373
Alignment:
Q  91 agagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 155  Q
    ||||| ||||||||||||||||||||||||||||| |||| | |||||| ||| |||||| ||||    
T  26490309 agagttgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgt 26490373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 412
Target Start/End: Original strand, 35082993 - 35083171
Alignment:
Q  241 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 340  Q
    |||||| |||| ||| ||| ||||| ||| |||||||||||| |||||| |||||||||| ||||  || |||||  ||  ||||| ||| ||| |||||    
T  35082993 tgttacaaaatcaagaaaaatgttagtaaataaatttagtaatatttgaacaattgttagataaaacccttgttagaaatgagctttagttacaatttat 35083092  T
Q  341 agtattatcaataacatttaaaaactgttacata-------tttatatttttgtaacactttttgtattactagtaaca 412  Q
    |||||||||  | ||||||||||| ||| ||| |        ||||||| ||||||||||||||| || ||||||||||    
T  35083093 agtattatctctgacatttaaaaagtgtcacaaaacaaaatgttatattattgtaacactttttgcatcactagtaaca 35083171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 39601011 - 39600930
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||||||| ||||||||||| ||||| || |||||||||    | | ||||| ||||||||||||||||||||||||||    
T  39601011 aagactagatgggataagattagaaatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaa 39600930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 42510341 - 42510190
Alignment:
Q  53 aagactagatgagataagattaggaat-gaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggat 151  Q
    ||||||||||| |||| | |||| ||| || |||| ||| |||| | | |||||||||||||||||||||| ||||||| | |||||| ||| ||||||     
T  42510341 aagactagatgggataggtttagaaattgataatactagggagttgggatagcacctatagtagaaaagatagtggaaaataggcttaggtggtttggac 42510242  T
Q  152 atgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
    ||||  |||| ||| |  |||||||||| || || || |||||||| |||||||    
T  42510241 atgt--agagaagacctatagattttgtggtaaggagagtagatcagatggagg 42510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 51447990 - 51447884
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  |  |||||  |||| ||||| ||||||||||||   || || ||||| |||||||||    
T  51447990 ggtagcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtagagagaagatccgtagatgccgtggtaagaagagtagatcaa 51447891  T
Q  199 atggagg 205  Q
    |||||||    
T  51447890 atggagg 51447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 55244266 - 55244332
Alignment:
Q  65 gataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaac 131  Q
    ||||||||||| ||||| || |||||||||| |  | | ||||||||||||||||||||||||||||    
T  55244266 gataagattagtaatgacaacattagagagttggtgcaacacctatagtagaaaagatggtggaaac 55244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 35033138 - 35033223
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 174  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||    
T  35033138 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagacccgtagat 35033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 22065 - 22180
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  22065 agagagtgggggtagcacctatagtagaaaagttggtagaaa-taggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 22163  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||| |||||||||    
T  22164 agtagattaaatggagg 22180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 363
Target Start/End: Original strand, 2179935 - 2180066
Alignment:
Q  234 tgaaaactgttactaaataaaggaaat--tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagta 331  Q
    |||||| ||||||||||||||  |||   ||||| | ||||||||||| | ||||||| ||||| || |||||| ||| |||||||||| ||||| |||     
T  2179935 tgaaaattgttactaaataaaaaaaaaaatgttaatgattaaatttagaatcatttgaacaattcttgggtaaattccctgttactaaagagctttagtt 2180034  T
Q  332 acactttatagtattatcaataacatttaaaa 363  Q
    | | |||||||| |||||  ||||||| ||||    
T  2180035 atattttatagtgttatctttaacattcaaaa 2180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 5168824 - 5168940
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||| ||||||||| |||| |||| |  |||||  || |||| | |||| ||||| ||| ||||||||   || ||||||||    
T  5168824 agagagtgggggtagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagacccgtagatgccgttgttagaag 5168923  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  5168924 agtagatcaaatggagg 5168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 358
Target Start/End: Complemental strand, 27713501 - 27713405
Alignment:
Q  262 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatt 358  Q
    |||||||||||||||||||||||||| |  |||||||||| |||  |  |||||||||| || || || || | ||||||||||||| | |||||||    
T  27713501 gttactaattaaatttagtaacatttaaataattgttaggcaaaacctatgttactaaatagttttagcaatattttatagtattattagtaacatt 27713405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 38430838 - 38430890
Alignment:
Q  87 ttagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    |||||| || ||||||||||||||||||||||||||||| |||| | ||||||    
T  38430838 ttagagcgttgaggtagcacctatagtagaaaagatggtagaaaataggctta 38430890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 49503844 - 49503784
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||  |||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  49503844 agagagttcaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 49503784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 19737002 - 19737105
Alignment:
Q  102 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatg 201  Q
    |||||||||||||||||||||||| |||| | || ||| ||| ||||   |||  ||||| ||| | |||||| ||||||| ||||| |||||||| |||    
T  19737002 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19737101  T
Q  202 gagg 205  Q
    ||||    
T  19737102 gagg 19737105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 19757905 - 19758008
Alignment:
Q  102 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatg 201  Q
    |||||||||||||||||||||||| |||| | || ||| ||| ||||   |||  ||||| ||| | |||||| ||||||| ||||| |||||||| |||    
T  19757905 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19758004  T
Q  202 gagg 205  Q
    ||||    
T  19758005 gagg 19758008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 50960922 - 50960863
Alignment:
Q  90 gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||| | ||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 50960863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 54365287 - 54365225
Alignment:
Q  70 gattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    |||||| ||||||||||||||||||  | | ||||||||||||||||||||| |||| |||||    
T  54365287 gattagaaatgaaaatattagagagagttggggtagcacctatagtagaaaatatggcggaaa 54365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 54128380 - 54128430
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  54128380 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 54128430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 34719362 - 34719321
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | |||||||||||| |||||||||||||||||||    
T  34719362 agagagttggggtagcacctatcgtagaaaagatggtggaaa 34719321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 39535733 - 39535680
Alignment:
Q  86 attagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    |||||||||| | || | |||||||||||||||||||||| ||||| |||||||    
T  39535733 attagagagttggggcaacacctatagtagaaaagatggtagaaacccggctta 39535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 44443470 - 44443441
Alignment:
Q  113 tagaaaagatggtggaaactcggcttaagt 142  Q
    ||||||||||||||||||||||||||||||    
T  44443470 tagaaaagatggtggaaactcggcttaagt 44443441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 1e-41; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 294 - 483
Target Start/End: Original strand, 48465443 - 48465633
Alignment:
Q  294 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacact 393  Q
    |||||||||||| |  |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  48465443 ttgttaggtaaaatttgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaaaaacagttacatatttatatttttgcaacact 48465542  T
Q  394 ttttgtattactagtaacat--nnnnnnntgtcacatatttataatttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaaat 483  Q
    ||||||||||||||| ||||         ||| |||| |||||||||||||||||||| ||||| ||| |||||| |||||| | |||||||    
T  48465543 ttttgtattactagtgacataaaaaaaaatgtaacatttttataatttgagaagttgt-aaaaattgttgcaaagctgtctatactaaaaat 48465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 271 - 401
Target Start/End: Original strand, 21317485 - 21317612
Alignment:
Q  271 taaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgtta 370  Q
    ||||||||||||||||| | |||||||||||||||| | |||||||||||| |||||| ||||| ||||| |||||| |||||||||| ||||| |||||    
T  21317485 taaatttagtaacatttcaacaattgttaggtaaaggctgtgttactaaaatgcttcactaacattttattgtattaccaataacattcaaaaagtgtta 21317584  T
Q  371 catatttatatttttgtaacactttttgtat 401  Q
    |   |||||||||||||||||||||||||||    
T  21317585 c---tttatatttttgtaacactttttgtat 21317612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 226 - 400
Target Start/End: Complemental strand, 24559093 - 24558918
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    ||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||||| | | ||||||||||| |  |    
T  24559093 gtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacgattgttaggtaacggctgtgttactaaagaatt 24558994  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata-tttttgtaacactttttgta 400  Q
    | ||| | | ||||||||||||||| ||||||| | ||| |||||| | |||||| |||||| |||||||||||||    
T  24558993 ttagtgatattttatagtattatcagtaacattcataaattgttacttgtttatattttttggaacactttttgta 24558918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 1685048 - 1684863
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  1685048 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 1684949  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  1684948 agttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacaatattgtaacactttttgtatcactagtaaca 1684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 228 - 412
Target Start/End: Original strand, 1152048 - 1152233
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| |  | |||||||||| ||||||||||||||||||| || ||     
T  1152048 aacacttgaaaattgtaactaaattaagaaaaatgttactaattaaattttgcaacactcaaacaattgttagataaagtccgtgttactaaagagtttt 1152147  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| |||||| |||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  1152148 agttacagtttataatattatctgtaacaattaaaaagtgtctcaaatgttacattattgtaacactttttgtatcactagtaaca 1152233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 47066132 - 47065945
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| ||| || |    
T  47066132 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagtt 47066033  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  47066032 ttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaaca 47065945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 4881167 - 4881073
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||| |||||||||||||| |||||   |||||||||||||||||||||||||||||    
T  4881167 gtaacacttgaaaattgttactaaatcaagaaaaatgttactgattaaatttagtaatatttgtataattgttaggtaaagtccgtgttactaaa 4881073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 43600269 - 43600392
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| || | |||| |||||||||||||||| |||||||||||||  | |    
T  43600269 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaaaacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 43600368  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  43600369 ttagttacattttatagtactatc 43600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 48464047 - 48464118
Alignment:
Q  231 aattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggt 302  Q
    ||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48464047 aattgaaaattgttactaaataaataaaaatgttactaattaaatttagtaacatttgaacaattgttaggt 48464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 37751053 - 37750913
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacattta 360  Q
    |||||||||||||| | |||||||||||  |||||||||| ||||| |  ||||||||| |||||| ||| ||| |||||||||||||| || ||||| |    
T  37751053 tgttactaattaaaatcagtaacatttgcgcaattgttagataaagccaatgttactaagaagctttagttacattttatagtattatctat-acattca 37750955  T
Q  361 aaaactgttacatat-ttatatttttgtaacactttttgtat 401  Q
    |||| |||  || || ||| ||| ||||||||||||||||||    
T  37750954 aaaaatgtcgcaaatgttacattattgtaacactttttgtat 37750913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 21539350 - 21539247
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 344  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||| | |||||||||| | |||||| |||||||||| || || ||| ||| ||| |||||    
T  21539350 actaaatcaaggaaaatgttactgattaaatttagtaacatttaaacaattgttagat-aagtccttgttactaaagagatttagttacattttttagta 21539252  T
Q  345 ttatc 349  Q
    |||||    
T  21539251 ttatc 21539247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 54470199 - 54470314
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||||||||||||||| | |||||||| |||||  |||| ||||| |||   ||| ||| |||||| || ||    
T  54470199 agagagttggggtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggag 54470298  T
Q  189 ggtagatcaaatggag 204  Q
     ||| |||||||||||    
T  54470299 agtaaatcaaatggag 54470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 4904238 - 4904144
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| || |||| ||||||||||| | | ||| ||||||| ||||||||||||||||||||  ||||||||||||||||  | ||||||||||    
T  4904238 gtaacacttaaaaattgttactaaatcatgaaaaatgttactgattaaatttagtaacatttgtacaattgttaggtaaagcacttgttactaaa 4904144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 37797844 - 37797958
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| |||| |||||||   || || |||||    
T  37797844 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagattcgtagatgccgtcgtaagaag 37797943  T
Q  189 ggtagatcaaatgga 203  Q
     ||||||||||||||    
T  37797944 agtagatcaaatgga 37797958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 22420993 - 22420889
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 199  Q
    |||||| || |||| ||||||||||||||| || |||||| |||||||||| |||| ||||| ||||| | |||||||||| | ||||| |||||| | |    
T  22420993 gtagcaactgtagtggaaaagatggtggaagctaggcttaggtgatttggacatgtagagagaagatctgaagattttgtaataagaagagtagataaga 22420894  T
Q  200 tggag 204  Q
    |||||    
T  22420893 tggag 22420889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 42293528 - 42293473
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 155  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||    
T  42293528 gtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgt 42293473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 43070082 - 43070015
Alignment:
Q  65 gataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||| |||||| ||||| || |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  43070082 gataggattagaaatgacaacattagagagttgaggtagcgcctatagtagaaatgatggtggaaact 43070015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 53300353 - 53300476
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| | ||||| ||| ||| ||||| ||||||||||||||||||  | | |||||||||||||||| ||||||||| ||| || |    
T  53300353 gtaacacttgaaaattgtaattaaatcaagaaaaatgttagtaattaaatttagtaacacctaaacaattgttaggtaaagcccgtgttaccaaagagtt 53300452  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||| ||| ||||    
T  53300453 ttagttacattttatcgtactatc 53300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 31459024 - 31459082
Alignment:
Q  91 agagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  31459024 agagtcgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 31459082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 41192828 - 41192921
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| | |||| ||||||||   |||| ||||| ||| | ||||||| ||||||    
T  41192828 agagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtagt 41192921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 49738884 - 49738835
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  49738884 ggtagcacctattgtagaaaagatggtagaaactcggcttaggtgatttg 49738835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 51252789 - 51252701
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||||| |||||| |||||| |||||  | |||||||||  | | |||||||||| ||||||||||||||||||||||| ||||||    
T  51252789 aagactagacgagataggattagaaatgactacattagagagagttggggtagcacctctagtagaaaagatggtggaaactaggctta 51252701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 436221 - 436337
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| | ||||||   || || |||||    
T  436221 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacctgtagatgccgtggtaagaag 436320  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  436321 agtagatcaaatggagg 436337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 31960104 - 31959988
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  31960104 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 31960005  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  31960004 agtagatcaaatggagg 31959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 48174383 - 48174267
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||| ||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| ||||||||   || || |||||    
T  48174383 agagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgtagatgccgtggtaagaag 48174284  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  48174283 agtagatcaaatggagg 48174267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 52569805 - 52569689
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  52569805 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 52569706  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  52569705 agtagatcaaatggagg 52569689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 53707786 - 53707902
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  53707786 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 53707885  T
Q  189 ggtagatcaaatggagg 205  Q
     ||| ||||||||||||    
T  53707886 agtatatcaaatggagg 53707902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 10208990 - 10209061
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatgg 124  Q
    ||||||||||| ||||  ||||| ||||| || |||||||||| | ||||| ||||||||||||||||||||    
T  10208990 aagactagatgggatagaattagaaatgacaacattagagagttggggtagaacctatagtagaaaagatgg 10209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 27450469 - 27450354
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || ||| || |||| ||||| ||| ||||||||   || || |||||    
T  27450469 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttttgacatgtagagagaagacccgtagatgccgttgtaagaag 27450370  T
Q  189 ggtagatcaaatggag 204  Q
     |||||||||||||||    
T  27450369 agtagatcaaatggag 27450354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 45423571 - 45423650
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||||| | ||||  ||||| ||||| || |||| ||||| ||||||||||||||| ||||||||||||| ||||||    
T  45423571 aagactagacgggatagaattagaaatgacaacattatagagttgaggtagcacctataatagaaaagatggtagaaact 45423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 42639296 - 42639238
Alignment:
Q  103 gcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 161  Q
    |||||||||||||||||||||||||||||  |||||| ||| |||||| |||| |||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagag 42639238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 26075347 - 26075290
Alignment:
Q  227 taacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaaca 284  Q
    ||||||||||||| |||||||| || ||| |||| |||||||| ||||||||||||||    
T  26075347 taacaattgaaaattgttactagatcaagaaaatggttactaagtaaatttagtaaca 26075290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 33709916 - 33710009
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| || ||| ||| ||| |  |||||||||| ||| | || |||| ||||||    
T  33709916 agagagttggggtaacacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagt 33710009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 4440845 - 4440961
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | || ||||||||||||||||||| |||| |||| | ||||||  || |||||  || | ||||| ||| ||||||||  ||| || |||||    
T  4440845 agagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaagaag 4440944  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  4440945 agtagatcaaatggagg 4440961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 30807549 - 30807625
Alignment:
Q  56 actagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    |||||||| ||||  |||||||||||  | || ||||||| || ||||||| |||||||||||||||||| ||||||    
T  30807549 actagatgtgatagaattaggaatgacgacataagagagttgatgtagcacatatagtagaaaagatggtagaaact 30807625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 35555927 - 35555831
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagat 195  Q
    ||||||||||||||||||||||||||| |||||| | |||| ||| |||||  || | ||||| ||| | || |||| ||||||||| || ||||||    
T  35555927 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagat 35555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 43433916 - 43434032
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  43433916 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 43434015  T
Q  189 ggtagatcaaatggagg 205  Q
     ||| ||||||||||||    
T  43434016 agtaaatcaaatggagg 43434032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 50471518 - 50471578
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||| ||| ||||||||  |||||||||||||||||||||||| || ||||||| |||||    
T  50471518 agagactcggggtagcactaatagtagaaaagatggtggaaactaggtttaagtggtttgg 50471578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 542 - 609
Target Start/End: Original strand, 21607449 - 21607516
Alignment:
Q  542 gtattttgctttaacatattttcatctagttggttaatcatgaagtgtgattctgtttgcagcctaag 609  Q
    ||||||||||| | ||||||||||| ||| |  |||||||||| || |||||||||||||| ||||||    
T  21607449 gtattttgcttgaccatattttcatttagctaattaatcatgaggtatgattctgtttgcaacctaag 21607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 38904000 - 38903917
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||||| ||  |||||||||||||||||||||||||||  || ||||   |||||||||| |||   ||||||||||||||    
T  38904000 ggtagcaccgatcatagaaaagatggtggaaactcggcttagttggtttgagcatgtggagagaagacttgtagattttgtagt 38903917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 28236175 - 28236225
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||| | |||||||||||||||||||||| ||||||||| | ||||||    
T  28236175 agagagtgggggtagcacctatagtagaaaagttggtggaaaataggctta 28236225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 30621484 - 30621434
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||| ||||||||||||||||||||||| | || ||| |||||||||    
T  30621484 ggtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgg 30621434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 44047638 - 44047572
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 155  Q
    ||||||| | |||||||||||||||||||||| |||| ||| || |||||| ||| |||||| ||||    
T  44047638 agagagttggggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatgt 44047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 26075295 - 26075222
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgtta 299  Q
    ||||||||  |||| ||||| || || ||| ||||||||||||| ||||||| |||||||| || |||||||||    
T  26075295 gtaacaataaaaaattgttattagatcaagaaaattgttactaagtaaattttgtaacattcgaacaattgtta 26075222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 27739807 - 27739750
Alignment:
Q  292 aattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatc 349  Q
    ||||||||||||||| || ||||||| || ||||| ||| ||| ||||||||||||||    
T  27739807 aattgttaggtaaagcccatgttactgaagagctttagttacattttatagtattatc 27739750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 46715649 - 46715612
Alignment:
Q  102 agcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggctta 46715612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 49987435 - 49987480
Alignment:
Q  104 cacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||||||||||||||||| | |||||| ||| |||||    
T  49987435 cacctatagtagaaaagatggtggaaaataggcttaggtggtttgg 49987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 1e-35; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 9242580 - 9242395
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||| |||||||| |||||||||| || ||     
T  9242580 aacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgtaacacttgaacaattgttagataaagtccatgttactaaagagtttt 9242481  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| |||||||||||||| |||||| ||||||| |||  || || ||| ||| |||||||||||||||||| |||| |||||    
T  9242480 agttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactattaaca 9242395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 226 - 348
Target Start/End: Original strand, 30089737 - 30089859
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||| |||||||||||||||| ||||||||||| |||| || |||||||||| ||||    
T  30089737 gtaacacttgaaaactgttactaaatcaagaaaaatgttactgattatatttagtaacatttgaacaattgttaggaaaagcccatgttactaaagagct 30089836  T
Q  326 tcagtaacactttatagtattat 348  Q
    | ||| ||| |||||||||||||    
T  30089837 ttagttacattttatagtattat 30089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 276 - 396
Target Start/End: Original strand, 26701083 - 26701201
Alignment:
Q  276 ttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatat 375  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||| | ||||||| | ||| |||| |||||    
T  26701083 ttagtaacagttggccaattgttaggtaaagcccgtgttactaaataacttcagtaacactttat-gtattattagtaacattcagaaaatgttgcatat 26701181  T
Q  376 ttatatttttgtaacactttt 396  Q
    ||||| |||||||||||||||    
T  26701182 ttata-ttttgtaacactttt 26701201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 3234329 - 3234467
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa-ttgttaggtaaagtccgtgttactaaaaagc 324  Q
    |||||| ||||||| ||| ||||||||||  ||| || |||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| |||    
T  3234329 gtaacagttgaaaaatgtaactaaataaaaaaaaatggtactaaattaatttagtaacatttgaccaatttattaggtaaagtccgtgttactaaatagc 3234428  T
Q  325 ttcagtaacactttatagtattatcaataacatttaaaaa 364  Q
    |||||||||| ||||  ||||||| | ||||||| |||||    
T  3234429 ttcagtaaca-tttaatgtattattagtaacattcaaaaa 3234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 26621189 - 26621051
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||| ||||||||||| ||||||| | |||||||||| ||||  || |||||||||| ||||    
T  26621189 gtaacacttgaaaattgttactaaattaagaaaaatgttactgattaaatttagcaacatttaaacaattgttagataaaagccatgttactaaagagct 26621090  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaa 364  Q
    | ||| ||| ||||||||||||||  ||||||| |||||    
T  26621089 ttagttacattttatagtattatctgtaacattcaaaaa 26621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 226 - 356
Target Start/End: Complemental strand, 26608637 - 26608507
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| |||||  |||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||| ||||| || |||||||||| ||||    
T  26608637 gtaacatttgaaaattgttatgaaatcaagaaaaatgttactgattaaatttagtaacatttgaacaattgttagataaagcccatgttactaaagagct 26608538  T
Q  326 tcagtaacactttatagtattatcaataaca 356  Q
    | |||  || ||||||||| |||| ||||||    
T  26608537 ttagttgcattttatagtactatctataaca 26608507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 16086524 - 16086611
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 348  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||  | ||||||| || ||||||||||||| |||||||||||||    
T  16086524 tgttactaattaaatttaataacatttgaataattgttaggtaaagctcatgttacttaatagcttcagtaacattttatagtattat 16086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 349
Target Start/End: Complemental strand, 4685501 - 4685378
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||| |||| |||||||||||||||| |||| ||||||||  | |    
T  4685501 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacacttgaacaattgttaggtaaagcccgtattactaaagtgtt 4685402  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  4685401 ttagttacattttatagtactatc 4685378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 30200289 - 30200195
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgattt 147  Q
    |||| |||||| |||| |||||| ||||| || ||||||||||   |||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  30200289 aagattagatgggatatgattagaaatgacaacattagagagttagggtaacacctatagtagaaaagatggtggaaactaggcttaggtgattt 30200195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 53 - 204
Target Start/End: Original strand, 33072906 - 33073059
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgga 150  Q
    |||||||||  ||||| |||||||||||| |  |||||||||  | | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||     
T  33072906 aagactagacaagataggattaggaatgacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttggg 33073005  T
Q  151 tatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 204  Q
     |||| ||||| ||| |||||||| | || || ||||| |||||||||||||||    
T  33073006 catgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggag 33073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 26225075 - 26224982
Alignment:
Q  227 taacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    ||||| ||||||| ||| ||||||| ||| ||| || ||||||||||||||||||||| |||| ||||| |||||||||| | |||||||||||    
T  26225075 taacacttgaaaattgtaactaaatcaagaaaaatgatactaattaaatttagtaacacttgaacaattattaggtaaagccggtgttactaaa 26224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 349
Target Start/End: Complemental strand, 20277458 - 20277335
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| | ||||| ||| ||||||| ||  ||| | ||| ||||||||||||||||||||| | ||||||||||||||||  | |||||||||| ||||    
T  20277458 gtaacactcgaaaattgtaactaaatcaaaaaaaatattattaattaaatttagtaacatttaaacaattgttaggtaaagcacctgttactaaagagct 20277359  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| | ||||||||||||    
T  20277358 ttagttacattatatagtattatc 20277335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 10022126 - 10022220
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||||||||||| ||| ||||||| |   ||| ||||||||||||| ||||||||||  ||| ||||||||||||||||  ||||||||||||    
T  10022126 gtaacaattgaaaattgtaactaaatcagaaaaaatgttactaattaagtttagtaacacatgaacaattgttaggtaaagctcgtgttactaaa 10022220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 38920796 - 38920846
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  38920796 ggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgg 38920846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 1740803 - 1740920
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    ||||||| ||| ||||||||| |||||||||||| |||||| ||| ||||| ||||| || ||||||   || ||||||||||| || || ||||||||     
T  1740803 ggtagcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcag 1740902  T
Q  199 atggagggttgtccaatc 216  Q
    ||||||||| ||| ||||    
T  1740903 atggagggtagtcaaatc 1740920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 38606969 - 38607112
Alignment:
Q  65 gataagattaggaatgaaaatatta---gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 161  Q
    |||| |||||||||||| || ||||   |||||| | |||||||||||||||||||| | |||| |||| | ||||||  || |||||| |||| |||||    
T  38606969 gataggattaggaatgacaacattaagagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagag 38607068  T
Q  162 gagatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
     ||| ||||||||   || |||||||| ||||||||||||||||    
T  38607069 aagacccgtagatgccgttgttagaagagtagatcaaatggagg 38607112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 12841565 - 12841449
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  12841565 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 12841466  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  12841465 agtagatcaaatggagg 12841449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 13859298 - 13859182
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||  ||| || |||||    
T  13859298 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaag 13859199  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  13859198 agtagatcaaatggagg 13859182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 27893871 - 27893725
Alignment:
Q  58 tagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 155  Q
    |||||| |||| |||||| || || ||||||||||||  | |||||| |||||||||||||| |||||||||||| | |||||| ||| |||| | ||||    
T  27893871 tagatgtgataggattagaaacgacaatattagagagagttgaggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttgaacatgt 27893772  T
Q  156 ggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
     ||    ||||| |||||||||||| |||| || |||||||| |||||||    
T  27893771 aga---aagatctgtagattttgtacttaggagagtagatcagatggagg 27893725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 43281666 - 43281782
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  43281666 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 43281765  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  43281766 agtagatcaaatggagg 43281782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 45836770 - 45836654
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  45836770 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 45836671  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  45836670 agtagatcaaatggagg 45836654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 19262723 - 19262609
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||| |||||||||||||| |||||| |||||| ||| ||||   |||| ||||| ||| | ||||| |||||||| |||||    
T  19262723 agagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtaga-tttgtagtaagaag 19262625  T
Q  189 ggtagatcaaatggag 204  Q
     |||||||| ||||||    
T  19262624 agtagatcagatggag 19262609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 12966025 - 12966123
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||| |||||  |||| ||||| ||| ||||| ||| |||||| || || |||||||||    
T  12966025 gtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacccgtaaattctgtagtaaggagagtagatcaa 12966123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 39906650 - 39906544
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| || ||||| | || || ||||| |||||||||    
T  39906650 ggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccatagatgtcgtggtaagaagagtagatcaa 39906551  T
Q  199 atggagg 205  Q
    |||||||    
T  39906550 atggagg 39906544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 42187462 - 42187522
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||| ||||||||||||| |||||||||||||||||| | |||||| ||| |||||    
T  42187462 agagagtcggggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgg 42187522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 206
Target Start/End: Complemental strand, 48736229 - 48736072
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatatta----gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||||||||||||| ||||| |||||  | ||||    |||||| | ||||||||||| ||||||||||||||  |||||| | |||| ||| ||||    
T  48736229 aagactagatgagataaaattagaaatgacgacattatagagagagttggggtagcacctacagtagaaaagatgggagaaactagacttaggtggtttg 48736130  T
Q  149 gatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggaggg 206  Q
       |||| ||| | ||| | || |||| ||||||||| || |||||||||||||||||    
T  48736129 ctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggaggg 48736072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 26205494 - 26205419
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    ||||||| ||| ||| |||||||||||||||||||||||| ||||  ||||| |||||||||   |||||||||||    
T  26205494 actaaatcaagaaaaatgttactaattaaatttagtaacacttgaaaaattggtaggtaaagctggtgttactaaa 26205419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 348
Target Start/End: Complemental strand, 26619186 - 26619080
Alignment:
Q  241 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 340  Q
    ||||||||||| ||| ||| ||||||| |||||||||| |||||||||| |||||| ||||||||  |  |||||||||| | ||| ||| ||| || ||    
T  26619186 tgttactaaatcaagaaaaatgttactgattaaatttattaacatttgaacaattg-taggtaaatcctatgttactaaagaactttagttacatttgat 26619088  T
Q  341 agtattat 348  Q
    ||||||||    
T  26619087 agtattat 26619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 40169651 - 40169762
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||| ||||||||||||||||||||||| | |||||| ||| |||||  |||| ||||  |||  ||||||||||||    || || |||||||||    
T  40169651 ggtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagacacgtagattttgtgtgaaggagagtagatcaa 40169750  T
Q  199 atggagggttgt 210  Q
    ||||||| ||||    
T  40169751 atggaggattgt 40169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 42177305 - 42177255
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||    
T  42177305 agagagttgaggtatcacctatagtagaaaagatggtgaaaactaggctta 42177255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 46356136 - 46356030
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| |||  ||||||| |||| || ||||| |||||||||    
T  46356136 ggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaagaagagtagatcaa 46356037  T
Q  199 atggagg 205  Q
    |||||||    
T  46356036 atggagg 46356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 2886012 - 2885927
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 174  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||||||    
T  2886012 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagat 2885927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 16170308 - 16170365
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttacta 318  Q
    |||||||||||||||||||||||| || | ||||||||||||||| ||  ||||||||    
T  16170308 tgttactaattaaatttagtaacacttaaacaattgttaggtaaaatcaatgttacta 16170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 35906491 - 35906406
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 174  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    
T  35906491 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagat 35906406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 6374860 - 6374972
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || ||||   |||| ||||| ||| | ||||||  ||| || |||||    
T  6374860 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagaccagtagatgctgtggtaagaag 6374959  T
Q  189 ggtagatcaaatg 201  Q
    |||||||||||||    
T  6374960 ggtagatcaaatg 6374972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 27021982 - 27021922
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| | |||||||||||||||||||||| ||||| ||||| |||||| ||| |||||    
T  27021982 agagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgg 27021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 29650376 - 29650492
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | || ||||||||||||||||||  |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  29650376 agagagtgggggcagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 29650475  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  29650476 agtagatcaaatggagg 29650492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 31005215 - 31005331
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  31005215 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 31005314  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  31005315 agtagatcaaatggagg 31005331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 36514497 - 36514437
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| | |||| ||| |||||    
T  36514497 agagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgg 36514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 43282400 - 43282460
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| | ||||||||||||||||||||||  |||||||||| |||||| |||| ||||    
T  43282400 agagagttggggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgg 43282460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 47848666 - 47848726
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| | |||||| ||||||||||||||||||||||||| | |||||| ||| |||||    
T  47848666 agagagttggggtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgg 47848726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 26742176 - 26742145
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||||||||||||||||||||||||||||    
T  26742176 ggtagcacctatagtagaaaagatggtggaaa 26742145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 28020966 - 28021033
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagat 166  Q
    |||||||| ||| ||||||||||||||||||||| |||||| ||| |||||  |||| ||||| ||||    
T  28020966 ggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaagat 28021033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 40139246 - 40139153
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgat 145  Q
    ||||||||| | ||||||||||| || || || |||||||||  ||| |||  |||||||||||||||| |||||||||||| |||||| |||||    
T  40139246 aagactagacgggataagattagaaaagacaacattagagagagtcg-ggtttcacctatagtagaaaatatggtggaaactgggcttaggtgat 40139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 31682882 - 31682776
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||| ||||||||||||| |||| |||| | ||||||  || ||||| ||||| ||||| ||| ||||||||   ||  | ||||| |||||||||    
T  31682882 ggtagcacatatagtagaaaagttggtagaaaataggcttagatggtttgggtatgtagagagaagacccgtagatgccgtcataagaagagtagatcaa 31682783  T
Q  199 atggagg 205  Q
    |||||||    
T  31682782 atggagg 31682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 36102046 - 36101964
Alignment:
Q  98 aggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgta 180  Q
    |||||||||||||| ||||||||||| |||||| | |||||| ||| |||||  |||| ||||| ||| |  |||||||||||    
T  36102046 aggtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacctatagattttgta 36101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 35559284 - 35559167
Alignment:
Q  89 agagagtcgaggtagcacct-atagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaa 187  Q
    ||||||| | |||||||||| |||||||||||| |||| |||| | ||||||  ||||||||| || | | ||| ||| || ||||| | || || ||||    
T  35559284 agagagtgggggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgagaagacccctagatgtcgtggtaagaa 35559185  T
Q  188 gggtagatcaaatggagg 205  Q
    | ||||||||||||||||    
T  35559184 gagtagatcaaatggagg 35559167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 36136756 - 36136797
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | ||||||||||||||||||||||||||| ||||    
T  36136756 agagagttggggtagcacctatagtagaaaagatggtagaaa 36136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 37617936 - 37618053
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggt-ggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaa 187  Q
    ||||||| | |||||||||||||||||||||| |||| | ||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||    
T  37617936 agagagtgggggtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaa 37618035  T
Q  188 gggtagatcaaatggagg 205  Q
    | ||||||||||||||||    
T  37618036 gagtagatcaaatggagg 37618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 41948519 - 41948568
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| || | |||||||||||||||||||| |||||||||| |||||    
T  41948519 gtagcacttacaatagaaaagatggtggaaactaggcttaagtggtttgg 41948568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 49029268 - 49029353
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 174  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    
T  49029268 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagat 49029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 4e-35; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 228 - 412
Target Start/End: Original strand, 12189956 - 12190139
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    ||||||| |||| ||| ||||||| ||| ||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || ||     
T  12189956 aacaattaaaaaatgtaactaaatcaagaaaaatattactaattaaatttagtaacatttgaacaattgttaggtaaagcccgtgttactaaagagtttt 12190055  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca 412  Q
    |||||   ||||||||||||| | |||||| || ||| ||||||   ||||||||||| ||||||||||  ||||||||||||||    
T  12190056 agtaattttttatagtattattagtaacatatataaagtgttactcgtttatattttt-taacacttttgatattactagtaaca 12190139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 226 - 412
Target Start/End: Original strand, 51758755 - 51758942
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||| | || ||||| ||||||||||  ||| |||||||| || |    
T  51758755 gtaacatttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacactcgaacaattattaggtaaagctcgtattactaaagagtt 51758854  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||| || || ||| ||| |||||||||||||||||| || |||||||    
T  51758855 ttagttacattttatagtattatctgtaacaattaaaaagtgttgcaaatgttacattattgtaacactttttgtatcaccagtaaca 51758942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 261 - 342
Target Start/End: Original strand, 3399659 - 3399740
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatag 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |||||| ||||||||||||||    
T  3399659 tgttactaattaaatttagtaacatttgaacaattgttaggtaaaatctatgttactaaatagcttcggtaacactttatag 3399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 234 - 364
Target Start/End: Complemental strand, 39368730 - 39368599
Alignment:
Q  234 tgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaac 333  Q
    |||||| ||||||||||| ||| ||| |||||||||||||| ||||| ||||||   ||||||||||| ||||  | || ||||||| ||||||||| ||    
T  39368730 tgaaaaatgttactaaatcaagaaaaatgttactaattaaaattagtcacatttatacaattgttaggcaaagcacatgctactaaagagcttcagttac 39368631  T
Q  334 a-ctttatagtattatcaataacatttaaaaa 364  Q
    |  ||||||||||||||| |||||||||||||    
T  39368630 atttttatagtattatcagtaacatttaaaaa 39368599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 16222780 - 16222874
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||| ||||||||||||| ||||  ||||||||||||||| |||||||||||||    
T  16222780 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaataaaatttagtaacacttgaataattgttaggtaaagcccgtgttactaaa 16222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 28636905 - 28637028
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||| |||||||||||||||||  |||||||||||||||||  |||| ||||| || |    
T  28636905 gtaacatttaaaaattgtaactaaatcaagaaaaatgttactaattcaatttagtaacatttgaataattgttaggtaaagtcactgttgctaaagagat 28637004  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  28637005 ttagttacattttatagtaatatc 28637028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 897464 - 897555
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    ||||||| ||||||||||| ||| ||| |||| ||||||||||||||||||| |||| |||||||||||| |||| | |||||||||| ||||    
T  897464 ttgaaaattgttactaaatgaagaaaaatgttcctaattaaatttagtaacaattgaacaattgttaggt-aagttcatgttactaaagagct 897555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 4001745 - 4001629
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||||||| ||||||||   || || |||||    
T  4001745 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacccgtagatgccgttgtaagaag 4001646  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  4001645 agtagatcaaatggagg 4001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 15085926 - 15086042
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || ||||||||    
T  15085926 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaag 15086025  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  15086026 agtagatcaaatggagg 15086042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 40416374 - 40416471
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatca 197  Q
    ||||||||||||||||||||||||||||||||  |||||| ||| ||| |  |||| ||||| ||| | |||||||||||||| || || ||||||||    
T  40416374 gtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatca 40416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 5911762 - 5911682
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaag 306  Q
    |||||| ||||||| | | ||||||| ||| ||| ||||||| |||||||||||||||| |||| ||||||||||||||||    
T  5911762 gtaacacttgaaaattttaactaaatcaagaaaaatgttactgattaaatttagtaacacttgaacaattgttaggtaaag 5911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 8671910 - 8672026
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||||||   || || |||||    
T  8671910 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgtggtaagaag 8672009  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  8672010 agtagatcaaatggagg 8672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 32083035 - 32082919
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||  ||||||||| ||||||||   || || |||||    
T  32083035 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgcagagaggagacccgtagatgccgttgtaagaag 32082936  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  32082935 agtagatcaaatggagg 32082919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 51812517 - 51812625
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||| || |||||||||||||||||||||||||| |||||| |||||||||  |||| ||||| | |   |||||||||||||| ||||     
T  51812517 agagagttggggtaacaactatagtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaaaaattgtagattttgtagtaagaaa 51812616  T
Q  189 ggtagatca 197  Q
     ||||||||    
T  51812617 agtagatca 51812625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 13208621 - 13208708
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 320  Q
    ||||||| ||| | ||||| ||| ||| ||||||||||||||||||||| || |||| | |||||||||||||  |||||||||||||    
T  13208621 ttgaaaattgtaattaaattaagaaaaatgttactaattaaatttagtaccacttgaaccattgttaggtaaaacccgtgttactaaa 13208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 15214329 - 15214415
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtg 312  Q
    |||||| ||||||| ||  ||||||| ||| ||| | |||||||||||||||||||| |||||| |||||||| |||||||| ||||    
T  15214329 gtaacacttgaaaattgcaactaaatcaagaaaaattttactaattaaatttagtaatatttgaacaattgttgggtaaagttcgtg 15214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 401
Target Start/End: Original strand, 18308150 - 18308327
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||  |||| | ||| ||||||||   |||||||||||||||| | |||||||| ||  |||    
T  18308150 gtaacatttgaaaattgttactaaatcaagaaaaatgttacagattacaattattaacatttctacaattgttaggtaaagcctgtgttactgaagggct 18308249  T
Q  326 tcagtaacactttatagtattatcaataacatttaaaaactgttacata--tttatatttttgtaacactttttgtat 401  Q
    | ||| ||| ||||||||||| |   ||||||| ||||| ||| ||| |   ||| ||| ||||||||||||||||||    
T  18308250 ttagttacattttatagtattgtttgtaacattcaaaaagtgtcacaaaatgttacattattgtaacactttttgtat 18308327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 51602058 - 51602164
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| |||||||| | || || ||||| |||||||||    
T  51602058 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaa 51602157  T
Q  199 atggagg 205  Q
    |||||||    
T  51602158 atggagg 51602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 43423711 - 43423804
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| |||||| ||| |||||  |||| ||||| |||   ||||||| ||||||    
T  43423711 agagagttggggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagt 43423804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 1210737 - 1210853
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  1210737 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 1210836  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  1210837 agtagatcaaatggagg 1210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 2544591 - 2544707
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | ||||||||||||||||||||||||||||||||   | |||| ||| |||||| |||| ||||| ||| |  |||||| | |||| || ||    
T  2544591 agagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctatagtaaggag 2544690  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||||| |||||||    
T  2544691 agtagatcagatggagg 2544707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 3819146 - 3819086
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||| |||||||||||||| |||||||||||||||| |||| | |||||||| |||||    
T  3819146 agagagttgaggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgg 3819086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 14226108 - 14226004
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 199  Q
    |||||||||||  |||||||||||||||||| | |||||| ||| |||||  |||| |||||||   | |||||||||||||| || || |||||||| |    
T  14226108 gtagcacctatcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcaca 14226009  T
Q  200 tggag 204  Q
    |||||    
T  14226008 tggag 14226004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 32404806 - 32404730
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagatt 175  Q
    |||| ||||||||||| ||||||||||||||| | |||||| ||| ||||||||||| ||||| ||| | |||||||    
T  32404806 ggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagatt 32404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 34792639 - 34792523
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  34792639 agagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 34792540  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  34792539 agtagatcaaatggagg 34792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 4590853 - 4590774
Alignment:
Q  54 agactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactc 133  Q
    ||||||||  ||||| |||||| ||||| ||||||||||||| | ||||||| | ||  |||||||||||||||||||||    
T  4590853 agactagacaagataggattagaaatgacaatattagagagttggggtagcatccattatagaaaagatggtggaaactc 4590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 48431686 - 48431603
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 182  Q
    |||||| ||||||||||||||||||||||||| | |||||| ||| |||||  |||| ||||| |||   ||||||||||||||    
T  48431686 ggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagt 48431603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 402
Target Start/End: Original strand, 17112927 - 17113107
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttac--taaaaag 323  Q
    |||| ||||||||| ||||||||||| ||| ||| |  ||||| |||||||| |||||| |||| |||||||||| |||||  | ||||||  |||| ||    
T  17112927 gtaataattgaaaattgttactaaatcaagaaaaatagtactagttaaattttgtaacacttgaacaattgttagttaaagctcatgttactataaagag 17113026  T
Q  324 cttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatat--ttttgtaacactttttgtatt 402  Q
    ||  | ||| | ||||  |||| |||| ||||||| ||||| |||||| ||||| |||  |||||||||| || |||||||    
T  17113027 ctgtaataatattttactgtatcatcagtaacattaaaaaaatgttacttatttctattcttttgtaacaattgttgtatt 17113107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 1661422 - 1661463
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 130  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  1661422 agagagttggggtagcacctatagtagaaaagatggtggaaa 1661463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 5338727 - 5338776
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||||||||||||||||||||||||||||  ||||| ||| |||||    
T  5338727 gtagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgg 5338776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 35828880 - 35828724
Alignment:
Q  53 aagactagatgagataagattaggaatgaaaatattagagagtcgag-----gtagcacctatagtagaaaagatggtggaaactcggcttaagtgattt 147  Q
    |||||||| || ||||||||||| ||||| ||||||||||||  |||     ||||||||||| ||||||||||||||||||| | || ||| ||| |||    
T  35828880 aagactaggtgtgataagattagaaatgacaatattagagaga-gagtttgagtagcacctatggtagaaaagatggtggaaaatagggttaggtggttt 35828782  T
Q  148 ggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 205  Q
    |||  ||| ||||| ||| |  |||||| |||||| || || | |||||| |||||||    
T  35828781 ggacgtgtagagagaagacctatagattatgtagtaaggagagaagatcatatggagg 35828724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 38868885 - 38868934
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    |||||||||||  ||||||||||||||||||||||||||| ||| |||||    
T  38868885 gtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgg 38868934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 696261 - 696377
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||  ||||| |||| ||||| ||| ||||||||   || || |||||    
T  696261 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggcttggacatgtagagagaagacccgtagatgccgttgtaagaag 696360  T
Q  189 ggtagatcaaatggagg 205  Q
     |||||||| |||||||    
T  696361 agtagatcatatggagg 696377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 1843989 - 1844033
Alignment:
Q  261 tgttactaattaaatttagtaacatttgaccaattgttaggtaaa 305  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||    
T  1843989 tgttactgattgaatttagtaacatttgaacaattgttaggtaaa 1844033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 7921843 - 7921899
Alignment:
Q  105 acctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 161  Q
    |||||||||||||||||||||||||||| || ||| ||| |||||| |||| |||||    
T  7921843 acctatagtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagag 7921899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 8391764 - 8391876
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  |  |||||| |||| ||||||||| ||||||||   || || |||||    
T  8391764 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagagaggagacccgtagatgccgttgtaagaag 8391863  T
Q  189 ggtagatcaaatg 201  Q
     ||||||||||||    
T  8391864 agtagatcaaatg 8391876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 13827850 - 13827746
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    ||||| ||||||||||||||||| |||||||||| || | | ||| |||||| |||| ||||| |||   ||||||| |||||| || || ||||||||     
T  13827850 ggtagtacctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcat 13827751  T
Q  199 atgga 203  Q
    |||||    
T  13827750 atgga 13827746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 15204615 - 15204675
Alignment:
Q  245 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaa 305  Q
    ||||||| ||| ||| |||| |||| |||||||||||||| |||| |||||||||||||||    
T  15204615 actaaatcaagaaaaatgttgctaactaaatttagtaacacttgaacaattgttaggtaaa 15204675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 13827994 - 13827935
Alignment:
Q  102 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 161  Q
    ||||||||||||||||||||||||||||||| || ||| ||| |||| | |||| |||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagag 13827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 16943167 - 16943210
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||    
T  16943167 agagagttggggtagtacctatagtagaaaagatggtggaaact 16943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 37097438 - 37097375
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttga 289  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||| || ||||||||||||||||||    
T  37097438 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactgataaaatttagtaacatttga 37097375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 437 - 491
Target Start/End: Complemental strand, 39368025 - 39367970
Alignment:
Q  437 tttgagaagttgtaaaaaactgtcgcaaagttgtctagaat-aaaaattgtgaatc 491  Q
    ||||||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||    
T  39368025 tttgagaagttgtaaaaaagtgtcgcaaaattgtccagactaaaaaattgtgaatc 39367970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 30202420 - 30202306
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||| | |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  30202420 agagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagacccgtagatgccgtggtaagaag 30202321  T
Q  189 ggtagatcaaatgga 203  Q
     ||||||||||||||    
T  30202320 agtagatcaaatgga 30202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 52073754 - 52073680
Alignment:
Q  88 tagagagtcgaggtagcacctatagtagaaaagatggt-ggaaactcggcttaagtgatttggatatgtggagag 161  Q
    |||||||| | |||||||||||| ||||||||||||||   |||||||||||| ||| |||||| |||| |||||    
T  52073754 tagagagttggggtagcacctattgtagaaaagatggtaaaaaactcggcttaggtggtttggacatgtagagag 52073680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 4380015 - 4380048
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaact 132  Q
    ||||||| ||||||||||||||||||||||||||    
T  4380015 ggtagcaactatagtagaaaagatggtggaaact 4380048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 8343151 - 8343098
Alignment:
Q  86 attagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 139  Q
    ||||||| || | |||| ||||| ||||||||||||||||||||||| ||||||    
T  8343151 attagagtgttggggtaacacctttagtagaaaagatggtggaaactaggctta 8343098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 17267976 - 17267927
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 148  Q
    ||||||| |||||||||||||||| ||||||||| |||||| ||| ||||    
T  17267976 ggtagcatctatagtagaaaagattgtggaaacttggcttaggtggtttg 17267927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 205
Target Start/End: Complemental strand, 36340082 - 36339977
Alignment:
Q  100 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 199  Q
    |||||||||||| |||||||||||||||||| | || ||| ||| ||| || |||  ||||| ||| |  ||||||||||||| ||  |||| ||||| |    
T  36340082 gtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacctatagattttgtagtaaggcgggttgatcaga 36339983  T
Q  200 tggagg 205  Q
    ||||||    
T  36339982 tggagg 36339977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 37591028 - 37591069
Alignment:
Q  113 tagaaaagatggtggaaactcggcttaagtgatttggatatg 154  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  37591028 tagaaaagatggtggaaactcgacctaagtggtttggatatg 37591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 70; Significance: 6e-31; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 228 - 412
Target Start/End: Complemental strand, 843 - 658
Alignment:
Q  228 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 327  Q
    |||| ||||||| ||| ||||||| ||| ||||||||||||||||||||| | |||| | || |||||||||| |||||||| |||||||||| || ||     
T  843 aacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagtttt 744  T
Q  328 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    ||| ||| |||||||||||||| |||||| ||||||| |||  || || ||| ||| ||| |||||||||||||| ||||||||||    
T  743 agttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattggaacactttttgtatcactagtaaca 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 257 - 397
Target Start/End: Complemental strand, 446350 - 446211
Alignment:
Q  257 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 356  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||| ||||||| | |||||||| ||||| ||||||||||||||||| ||  | |||||    
T  446350 aaattgttaccaattaaatttggtaacatttgaacaattgttaggaaaagtccatattactaaagagctttagtaacactttatagtagtagtagtaaca 446251  T
Q  357 tttaaaaactgttacatatttatatttttgtaacacttttt 397  Q
    || ||||| |||||| ||||| || ||||||||||||||||    
T  446250 ttaaaaaaatgttacctatttgta-ttttgtaacacttttt 446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 233 - 412
Target Start/End: Complemental strand, 40789 - 40609
Alignment:
Q  233 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 332  Q
    ||||||| ||| ||||||| ||| ||||||||||||||||||||| | |||| | || |||||||||| |||||||| |||||||||| || || ||| |    
T  40789 ttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagttttagtta 40690  T
Q  333 cactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 412  Q
    || ||||||||||||||  ||||| ||||||| |||  || || ||| ||| | |||||||||||||||| ||||||||||    
T  40689 cattttatagtattatctgtaacaattaaaaagtgtctcaaatgttacattatcgtaacactttttgtatcactagtaaca 40609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 226 - 349
Target Start/End: Original strand, 6701 - 6824
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||| | |    
T  6701 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgtt 6800  T
Q  326 tcagtaacactttatagtattatc 349  Q
    | ||| ||| ||||||||| ||||    
T  6801 ttagttacattttatagtactatc 6824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 82713 - 82829
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||| || | ||||| |||||| |||||   || || |||||    
T  82713 agagagtgggggtagcacctatagtagaaaagttggtagaaaatgggcttagatgatttggacatatagagagaagatccatagatgcagtcgtaagaag 82812  T
Q  189 ggtagatcaaatggagg 205  Q
    |||| ||||||||||||    
T  82813 ggtatatcaaatggagg 82829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 44164 - 44098
Alignment:
Q  83 aatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 149  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| ||| |||||    
T  44164 aatattagagagttggggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgg 44098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 31460 - 31576
Alignment:
Q  89 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 188  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    | || |||||    
T  31460 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccatggtaagaag 31559  T
Q  189 ggtagatcaaatggagg 205  Q
     ||||||||||||||||    
T  31560 agtagatcaaatggagg 31576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 1228 - 1123
Alignment:
Q  99 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 198  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||| |||||||||    
T  1228 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaa 1129  T
Q  199 atggag 204  Q
    ||||||    
T  1128 atggag 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 334
Target Start/End: Original strand, 8747 - 8853
Alignment:
Q  226 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 325  Q
    |||||| ||||||| ||| ||||||||||  |||| |||||||| | ||| ||||||||||| ||||||| || || |||  || |||||||||| ||||    
T  8747 gtaacagttgaaaaatgtaactaaataaacaaaat-gttactaaatgaatatagtaacatttaaccaattatttggcaaacccc-tgttactaaatagct 8844  T
Q  326 tcagtaaca 334  Q
    |||||||||    
T  8845 tcagtaaca 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 11802 - 11873
Alignment:
Q  101 tagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtag 172  Q
    |||||||||| |||||||||||||| | ||||||||||| ||| |||||  |||| ||||| ||||| ||||    
T  11802 tagcacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaagatctgtag 11873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University