View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9122_low_50 (Length: 240)

Name: NF9122_low_50
Description: NF9122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9122_low_50
NF9122_low_50
[»] chr8 (53 HSPs)
chr8 (7-223)||(16485702-16485918)
chr8 (8-223)||(35225658-35225873)
chr8 (14-223)||(15001463-15001671)
chr8 (6-223)||(41709773-41709990)
chr8 (11-222)||(29610952-29611163)
chr8 (8-209)||(31513477-31513678)
chr8 (8-225)||(37618286-37618503)
chr8 (8-225)||(39642877-39643094)
chr8 (6-223)||(34063124-34063341)
chr8 (12-223)||(8672953-8673164)
chr8 (8-223)||(30542916-30543131)
chr8 (9-223)||(4052476-4052690)
chr8 (6-223)||(7591339-7591556)
chr8 (8-223)||(41548614-41548829)
chr8 (9-211)||(30501153-30501355)
chr8 (6-223)||(37664174-37664392)
chr8 (9-223)||(45446451-45446665)
chr8 (6-223)||(40389036-40389253)
chr8 (11-223)||(10467060-10467272)
chr8 (6-209)||(25478253-25478456)
chr8 (8-223)||(6386572-6386787)
chr8 (8-223)||(27103955-27104170)
chr8 (6-223)||(12753217-12753434)
chr8 (7-223)||(29672215-29672432)
chr8 (7-223)||(34101504-34101720)
chr8 (8-223)||(3251550-3251765)
chr8 (6-223)||(32019893-32020110)
chr8 (9-223)||(5968759-5968973)
chr8 (13-223)||(13406834-13407044)
chr8 (14-223)||(22999253-22999463)
chr8 (8-209)||(7394708-7394909)
chr8 (13-209)||(14004943-14005139)
chr8 (9-209)||(37861869-37862068)
chr8 (11-223)||(45114051-45114263)
chr8 (9-195)||(17520619-17520804)
chr8 (46-223)||(29563158-29563335)
chr8 (8-163)||(37474756-37474911)
chr8 (12-223)||(31732060-31732257)
chr8 (9-209)||(21272694-21272877)
chr8 (15-195)||(10656587-10656767)
chr8 (31-205)||(16595067-16595240)
chr8 (117-223)||(32303588-32303694)
chr8 (11-209)||(17805701-17805899)
chr8 (8-82)||(38047483-38047557)
chr8 (35-204)||(10932751-10932919)
chr8 (41-204)||(22756338-22756501)
chr8 (105-223)||(27109532-27109650)
chr8 (8-92)||(32303502-32303586)
chr8 (133-200)||(54189-54256)
chr8 (160-209)||(5859518-5859567)
chr8 (137-209)||(6460271-6460344)
chr8 (9-92)||(15351820-15351903)
chr8 (67-209)||(10320232-10320372)
[»] chr6 (46 HSPs)
chr6 (8-223)||(32860047-32860262)
chr6 (9-223)||(10485153-10485367)
chr6 (8-223)||(10959996-10960211)
chr6 (6-223)||(29054353-29054569)
chr6 (8-223)||(11613709-11613924)
chr6 (8-223)||(17867831-17868046)
chr6 (8-223)||(17877614-17877829)
chr6 (6-223)||(2614892-2615109)
chr6 (8-209)||(24203372-24203573)
chr6 (6-223)||(34176826-34177043)
chr6 (12-223)||(3259679-3259890)
chr6 (12-223)||(9902580-9902791)
chr6 (8-223)||(15277198-15277413)
chr6 (9-223)||(14925375-14925589)
chr6 (11-223)||(18597079-18597291)
chr6 (12-223)||(3932729-3932940)
chr6 (14-209)||(11279138-11279333)
chr6 (9-223)||(11382060-11382272)
chr6 (5-223)||(32409767-32409985)
chr6 (12-213)||(166845-167046)
chr6 (6-221)||(31870013-31870231)
chr6 (8-223)||(15276855-15277070)
chr6 (9-223)||(3379706-3379920)
chr6 (14-223)||(10324035-10324244)
chr6 (10-223)||(17443258-17443466)
chr6 (11-223)||(8177803-8178014)
chr6 (9-213)||(18057525-18057729)
chr6 (6-223)||(11675290-11675507)
chr6 (43-223)||(24242660-24242840)
chr6 (57-223)||(32132347-32132513)
chr6 (8-225)||(23636217-23636434)
chr6 (11-223)||(11212253-11212465)
chr6 (12-204)||(7396048-7396239)
chr6 (57-224)||(4494081-4494249)
chr6 (10-223)||(3290668-3290868)
chr6 (11-223)||(14807939-14808133)
chr6 (9-88)||(14925136-14925215)
chr6 (96-223)||(34683991-34684117)
chr6 (13-82)||(33041403-33041472)
chr6 (16-203)||(9613990-9614177)
chr6 (49-204)||(35004087-35004242)
chr6 (152-205)||(27824712-27824765)
chr6 (136-204)||(29424613-29424681)
chr6 (15-92)||(34402919-34402992)
chr6 (15-83)||(13415860-13415928)
chr6 (48-204)||(28068824-28068980)
[»] chr2 (56 HSPs)
chr2 (11-223)||(38992953-38993165)
chr2 (9-221)||(6896166-6896378)
chr2 (8-223)||(7761452-7761667)
chr2 (8-223)||(34338806-34339021)
chr2 (9-223)||(9732810-9733024)
chr2 (6-223)||(32766381-32766599)
chr2 (6-223)||(33889239-33889456)
chr2 (10-209)||(2644968-2645166)
chr2 (10-223)||(18685832-18686045)
chr2 (7-223)||(19513566-19513783)
chr2 (11-223)||(30326214-30326425)
chr2 (11-209)||(37308665-37308864)
chr2 (10-223)||(17540710-17540924)
chr2 (10-223)||(30798370-30798583)
chr2 (12-209)||(7258907-7259104)
chr2 (9-225)||(28824437-28824653)
chr2 (6-209)||(3913337-3913540)
chr2 (12-223)||(44284625-44284836)
chr2 (11-209)||(32497925-32498123)
chr2 (14-209)||(5278720-5278914)
chr2 (8-223)||(16177762-16177977)
chr2 (16-223)||(35114781-35114988)
chr2 (6-190)||(38623181-38623365)
chr2 (9-195)||(40692321-40692507)
chr2 (9-223)||(40832349-40832563)
chr2 (34-223)||(16104270-16104459)
chr2 (35-223)||(42706355-42706543)
chr2 (26-201)||(26981606-26981781)
chr2 (8-223)||(33366606-33366821)
chr2 (11-208)||(41365992-41366189)
chr2 (15-223)||(39461310-39461518)
chr2 (8-223)||(42365573-42365788)
chr2 (8-213)||(11114878-11115081)
chr2 (9-223)||(13829434-13829636)
chr2 (57-223)||(12672402-12672568)
chr2 (12-223)||(30712853-30713067)
chr2 (9-221)||(10399750-10399962)
chr2 (66-223)||(41934577-41934734)
chr2 (11-223)||(2086068-2086270)
chr2 (135-223)||(9717220-9717308)
chr2 (134-225)||(26418917-26419008)
chr2 (7-92)||(9717328-9717413)
chr2 (12-169)||(27462685-27462842)
chr2 (8-112)||(37863245-37863349)
chr2 (31-209)||(4641526-4641702)
chr2 (104-223)||(12939275-12939394)
chr2 (7-81)||(37003769-37003843)
chr2 (134-223)||(37003873-37003962)
chr2 (134-195)||(1247171-1247232)
chr2 (13-82)||(12939202-12939271)
chr2 (134-213)||(45463115-45463194)
chr2 (65-171)||(8112348-8112454)
chr2 (16-92)||(18793180-18793256)
chr2 (148-223)||(20907585-20907660)
chr2 (66-196)||(26796251-26796381)
chr2 (15-172)||(18278949-18279104)
[»] chr7 (60 HSPs)
chr7 (10-223)||(26910293-26910505)
chr7 (8-204)||(34519527-34519723)
chr7 (8-223)||(22723912-22724127)
chr7 (9-209)||(26994106-26994306)
chr7 (5-223)||(47953190-47953408)
chr7 (8-209)||(43368215-43368416)
chr7 (8-223)||(10932437-10932652)
chr7 (8-223)||(18386525-18386739)
chr7 (12-223)||(21784871-21785082)
chr7 (8-209)||(41211080-41211281)
chr7 (8-223)||(26371689-26371904)
chr7 (8-223)||(36769449-36769664)
chr7 (12-223)||(44748695-44748906)
chr7 (6-223)||(9913525-9913741)
chr7 (6-223)||(9927213-9927429)
chr7 (11-223)||(3922586-3922798)
chr7 (35-223)||(22724438-22724626)
chr7 (12-223)||(11321769-11321980)
chr7 (8-223)||(43158566-43158781)
chr7 (6-223)||(38301343-38301560)
chr7 (6-223)||(40753155-40753372)
chr7 (9-225)||(1363635-1363850)
chr7 (12-223)||(329470-329687)
chr7 (9-223)||(29661323-29661536)
chr7 (8-209)||(1870149-1870350)
chr7 (9-223)||(47316579-47316793)
chr7 (6-223)||(46633697-46633909)
chr7 (9-223)||(34295292-34295499)
chr7 (117-224)||(41665564-41665671)
chr7 (10-223)||(48894717-48894930)
chr7 (17-223)||(18470684-18470888)
chr7 (9-212)||(43213806-43214009)
chr7 (8-173)||(11250667-11250832)
chr7 (12-223)||(20127289-20127500)
chr7 (10-223)||(32873654-32873864)
chr7 (9-223)||(30849127-30849341)
chr7 (8-185)||(16963176-16963353)
chr7 (10-222)||(43189124-43189336)
chr7 (8-223)||(17237076-17237291)
chr7 (8-223)||(48445521-48445736)
chr7 (46-219)||(23349209-23349382)
chr7 (6-223)||(46448522-46448739)
chr7 (15-213)||(37966984-37967182)
chr7 (5-209)||(3891919-3892107)
chr7 (8-178)||(11822268-11822438)
chr7 (124-223)||(26652866-26652965)
chr7 (11-113)||(26700587-26700689)
chr7 (121-223)||(34117452-34117554)
chr7 (134-207)||(46408905-46408978)
chr7 (67-223)||(30598947-30599103)
chr7 (67-223)||(21133372-21133528)
chr7 (134-225)||(46627168-46627259)
chr7 (157-223)||(47947760-47947826)
chr7 (134-223)||(22631738-22631827)
chr7 (6-71)||(41665476-41665541)
chr7 (68-209)||(42332073-42332214)
chr7 (124-204)||(48699417-48699497)
chr7 (101-209)||(15035226-15035334)
chr7 (140-204)||(35645466-35645530)
chr7 (49-196)||(8360580-8360726)
[»] chr3 (54 HSPs)
chr3 (8-224)||(22484616-22484832)
chr3 (12-223)||(3964286-3964496)
chr3 (9-223)||(3867523-3867737)
chr3 (12-213)||(19906769-19906970)
chr3 (8-223)||(3864550-3864762)
chr3 (7-223)||(51925080-51925296)
chr3 (8-223)||(31882895-31883110)
chr3 (9-223)||(12349045-12349259)
chr3 (11-209)||(29584886-29585084)
chr3 (6-223)||(33364649-33364866)
chr3 (15-223)||(24571278-24571486)
chr3 (11-223)||(44116936-44117148)
chr3 (9-225)||(50386330-50386546)
chr3 (6-223)||(28675787-28676004)
chr3 (8-223)||(2135067-2135282)
chr3 (8-223)||(42636276-42636491)
chr3 (10-209)||(51259655-51259854)
chr3 (2-223)||(38213351-38213572)
chr3 (6-223)||(40094500-40094717)
chr3 (15-223)||(1344587-1344795)
chr3 (11-223)||(47958308-47958520)
chr3 (31-223)||(20609544-20609736)
chr3 (9-223)||(20255042-20255255)
chr3 (5-223)||(39052708-39052926)
chr3 (9-223)||(49748785-49748999)
chr3 (9-225)||(21221235-21221450)
chr3 (20-223)||(34026664-34026867)
chr3 (8-223)||(6179429-6179638)
chr3 (10-223)||(51296578-51296789)
chr3 (7-223)||(21373927-21374143)
chr3 (8-223)||(45690779-45690989)
chr3 (16-223)||(54622678-54622884)
chr3 (9-223)||(29646063-29646277)
chr3 (9-210)||(50678808-50679009)
chr3 (10-210)||(24721495-24721695)
chr3 (9-209)||(25927201-25927401)
chr3 (26-209)||(25860312-25860495)
chr3 (15-223)||(44267739-44267941)
chr3 (6-209)||(53557666-53557869)
chr3 (10-223)||(4851338-4851544)
chr3 (9-157)||(41682927-41683075)
chr3 (8-209)||(5442302-5442491)
chr3 (9-225)||(3695181-3695382)
chr3 (18-204)||(44000277-44000462)
chr3 (101-223)||(26282353-26282475)
chr3 (8-82)||(43175613-43175687)
chr3 (26-213)||(52300444-52300633)
chr3 (67-202)||(28624853-28624987)
chr3 (14-82)||(10747338-10747406)
chr3 (70-209)||(34351303-34351442)
chr3 (159-223)||(41694925-41694989)
chr3 (50-223)||(32768589-32768764)
chr3 (70-209)||(39215404-39215543)
chr3 (134-222)||(25954449-25954536)
[»] chr1 (71 HSPs)
chr1 (15-223)||(6143947-6144155)
chr1 (9-223)||(31004137-31004351)
chr1 (8-223)||(844678-844893)
chr1 (9-223)||(42512725-42512939)
chr1 (10-223)||(1351391-1351604)
chr1 (6-222)||(6029248-6029469)
chr1 (6-223)||(26764747-26764964)
chr1 (11-223)||(6711003-6711215)
chr1 (6-222)||(17887954-17888170)
chr1 (15-223)||(32270358-32270566)
chr1 (8-223)||(15539844-15540059)
chr1 (10-209)||(35387267-35387466)
chr1 (9-223)||(26118170-26118384)
chr1 (6-223)||(30105631-30105849)
chr1 (9-223)||(42510530-42510744)
chr1 (8-225)||(16476109-16476326)
chr1 (8-223)||(11772586-11772801)
chr1 (1-224)||(32289291-32289514)
chr1 (8-223)||(50304656-50304871)
chr1 (9-223)||(45490830-45491044)
chr1 (35-223)||(13994056-13994243)
chr1 (11-223)||(16451132-16451344)
chr1 (9-209)||(51264514-51264714)
chr1 (6-223)||(28340256-28340472)
chr1 (6-223)||(45658826-45659043)
chr1 (9-208)||(24339593-24339793)
chr1 (11-225)||(41967805-41968020)
chr1 (11-223)||(39281899-39282111)
chr1 (12-223)||(7183923-7184134)
chr1 (11-225)||(5109732-5109945)
chr1 (41-223)||(12890243-12890425)
chr1 (11-223)||(1601178-1601387)
chr1 (16-209)||(16437381-16437574)
chr1 (8-209)||(41972930-41973131)
chr1 (12-223)||(16386859-16387069)
chr1 (9-223)||(49303309-49303522)
chr1 (11-223)||(17327606-17327818)
chr1 (11-223)||(50540349-50540561)
chr1 (9-209)||(51703118-51703318)
chr1 (8-204)||(44737996-44738192)
chr1 (31-225)||(38086973-38087167)
chr1 (35-223)||(16704731-16704919)
chr1 (7-113)||(21071729-21071835)
chr1 (66-223)||(50382412-50382572)
chr1 (108-223)||(25539860-25539975)
chr1 (6-223)||(10384372-10384584)
chr1 (10-209)||(46154919-46155125)
chr1 (11-209)||(7837152-7837351)
chr1 (12-107)||(38663228-38663323)
chr1 (68-209)||(570405-570549)
chr1 (66-223)||(42705249-42705407)
chr1 (5-142)||(8838983-8839120)
chr1 (134-223)||(38663137-38663226)
chr1 (11-209)||(39792826-39793023)
chr1 (8-82)||(40811325-40811399)
chr1 (15-223)||(3414814-3415022)
chr1 (8-204)||(26733579-26733775)
chr1 (51-205)||(504388-504542)
chr1 (8-60)||(16643186-16643238)
chr1 (6-110)||(47242468-47242572)
chr1 (9-64)||(25539982-25540037)
chr1 (159-213)||(16643287-16643341)
chr1 (34-195)||(6771401-6771562)
chr1 (31-172)||(7837430-7837571)
chr1 (124-169)||(23799607-23799652)
chr1 (59-223)||(25343213-25343378)
chr1 (69-204)||(46447688-46447823)
chr1 (169-223)||(20495006-20495060)
chr1 (158-204)||(32467925-32467971)
chr1 (126-171)||(16862484-16862529)
chr1 (143-223)||(34663932-34664012)
[»] scaffold0280 (1 HSPs)
scaffold0280 (9-222)||(13573-13786)
[»] chr4 (87 HSPs)
chr4 (7-213)||(50729413-50729619)
chr4 (8-209)||(24002352-24002553)
chr4 (6-222)||(3649636-3649852)
chr4 (9-223)||(50178365-50178580)
chr4 (6-223)||(44324212-44324429)
chr4 (8-223)||(56154620-56154835)
chr4 (11-223)||(20802406-20802618)
chr4 (9-223)||(38486130-38486344)
chr4 (9-223)||(44649037-44649251)
chr4 (6-223)||(9807155-9807371)
chr4 (9-223)||(1231310-1231524)
chr4 (5-223)||(9512209-9512427)
chr4 (9-223)||(23521879-23522093)
chr4 (9-223)||(52949719-52949933)
chr4 (8-221)||(16320520-16320732)
chr4 (6-223)||(50727783-50728000)
chr4 (6-223)||(50735797-50736014)
chr4 (15-223)||(39078660-39078868)
chr4 (12-223)||(32181262-32181473)
chr4 (11-209)||(38812533-38812731)
chr4 (14-223)||(2725011-2725219)
chr4 (6-223)||(33552712-33552929)
chr4 (6-223)||(36885931-36886148)
chr4 (12-223)||(55593884-55594096)
chr4 (6-223)||(29785406-29785624)
chr4 (9-223)||(33176905-33177119)
chr4 (33-223)||(47642388-47642578)
chr4 (8-224)||(20517893-20518110)
chr4 (9-209)||(12600899-12601099)
chr4 (8-222)||(26083338-26083551)
chr4 (8-208)||(36497231-36497431)
chr4 (9-209)||(46680383-46680583)
chr4 (9-211)||(50186539-50186741)
chr4 (15-224)||(20694369-20694578)
chr4 (16-209)||(24210332-24210525)
chr4 (11-223)||(4325790-4326002)
chr4 (11-223)||(29592894-29593106)
chr4 (8-223)||(22318256-22318471)
chr4 (11-193)||(6776607-6776789)
chr4 (11-223)||(53200518-53200731)
chr4 (8-212)||(11056052-11056256)
chr4 (35-223)||(21202739-21202926)
chr4 (11-209)||(42869987-42870182)
chr4 (8-223)||(52319322-52319542)
chr4 (8-203)||(2629823-2630018)
chr4 (9-225)||(36743562-36743777)
chr4 (12-220)||(41711849-41712057)
chr4 (9-207)||(21580041-21580238)
chr4 (11-213)||(28115261-28115462)
chr4 (31-209)||(37865766-37865944)
chr4 (12-193)||(49151976-49152157)
chr4 (11-223)||(2786963-2787175)
chr4 (10-209)||(55065207-55065406)
chr4 (7-209)||(29616183-29616381)
chr4 (11-169)||(6973788-6973946)
chr4 (10-209)||(47361287-47361482)
chr4 (12-223)||(54542989-54543198)
chr4 (11-185)||(25978487-25978660)
chr4 (59-223)||(34929914-34930078)
chr4 (116-223)||(43641098-43641205)
chr4 (6-211)||(7554827-7555032)
chr4 (66-223)||(37695471-37695628)
chr4 (10-178)||(42772832-42773000)
chr4 (12-144)||(14296645-14296777)
chr4 (12-144)||(14314893-14315025)
chr4 (134-225)||(37931917-37932008)
chr4 (10-223)||(30942787-30943000)
chr4 (6-82)||(13110446-13110522)
chr4 (117-209)||(23327931-23328024)
chr4 (116-204)||(41897338-41897426)
chr4 (86-209)||(7001866-7001988)
chr4 (124-227)||(45577680-45577783)
chr4 (67-204)||(9947947-9948084)
chr4 (11-92)||(23328026-23328107)
chr4 (65-185)||(44355784-44355904)
chr4 (9-64)||(2114194-2114249)
chr4 (11-82)||(44640463-44640533)
chr4 (165-223)||(14296596-14296654)
chr4 (165-223)||(14314844-14314902)
chr4 (8-82)||(20644113-20644187)
chr4 (137-203)||(38520518-38520584)
chr4 (101-203)||(52673830-52673932)
chr4 (150-223)||(13110326-13110399)
chr4 (11-128)||(56487162-56487274)
chr4 (162-203)||(41720862-41720903)
chr4 (138-203)||(47741287-47741352)
chr4 (153-205)||(40792434-40792486)
[»] scaffold0650 (1 HSPs)
scaffold0650 (12-213)||(1532-1733)
[»] chr5 (46 HSPs)
chr5 (15-224)||(32092874-32093082)
chr5 (8-223)||(2351676-2351891)
chr5 (8-223)||(11963337-11963552)
chr5 (6-211)||(4689581-4689786)
chr5 (11-223)||(3735353-3735565)
chr5 (5-211)||(7770161-7770367)
chr5 (7-222)||(18470312-18470527)
chr5 (9-223)||(39918503-39918717)
chr5 (15-223)||(7523168-7523376)
chr5 (8-208)||(8136848-8137048)
chr5 (8-219)||(31879961-31880172)
chr5 (11-220)||(24181512-24181721)
chr5 (10-223)||(29241374-29241587)
chr5 (11-223)||(32528711-32528923)
chr5 (8-223)||(35701273-35701488)
chr5 (11-209)||(39788203-39788401)
chr5 (8-209)||(7208115-7208316)
chr5 (8-209)||(34794897-34795098)
chr5 (25-209)||(22493321-22493505)
chr5 (8-223)||(31644442-31644657)
chr5 (8-223)||(27838959-27839173)
chr5 (57-225)||(21739095-21739263)
chr5 (9-225)||(40489331-40489546)
chr5 (12-223)||(31770480-31770691)
chr5 (8-223)||(41459585-41459799)
chr5 (16-223)||(41790356-41790562)
chr5 (11-223)||(6284188-6284399)
chr5 (9-223)||(8560868-8561081)
chr5 (57-223)||(22432243-22432409)
chr5 (15-222)||(553394-553601)
chr5 (16-223)||(7725702-7725909)
chr5 (6-209)||(24036240-24036442)
chr5 (11-213)||(5598486-5598688)
chr5 (68-209)||(4818085-4818226)
chr5 (9-165)||(37148475-37148631)
chr5 (66-223)||(28090463-28090620)
chr5 (11-223)||(23091192-23091404)
chr5 (6-113)||(4664937-4665044)
chr5 (101-208)||(5571622-5571729)
chr5 (8-205)||(17031171-17031368)
chr5 (134-223)||(40182460-40182549)
chr5 (134-203)||(700612-700681)
chr5 (98-180)||(5673178-5673260)
chr5 (9-75)||(5571543-5571609)
chr5 (9-46)||(21739016-21739053)
chr5 (11-55)||(40182552-40182596)
[»] scaffold0208 (1 HSPs)
scaffold0208 (8-204)||(2224-2419)
[»] scaffold0054 (1 HSPs)
scaffold0054 (8-208)||(23586-23786)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-211)||(5332-5528)
[»] scaffold0027 (1 HSPs)
scaffold0027 (8-223)||(15168-15383)
[»] scaffold0014 (1 HSPs)
scaffold0014 (10-209)||(101959-102158)
[»] scaffold0729 (1 HSPs)
scaffold0729 (11-193)||(4467-4649)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-223)||(51435-51648)
[»] scaffold0169 (2 HSPs)
scaffold0169 (57-223)||(17988-18154)
scaffold0169 (116-223)||(12529-12636)
[»] scaffold0181 (1 HSPs)
scaffold0181 (8-209)||(18977-19176)
[»] scaffold0050 (1 HSPs)
scaffold0050 (15-207)||(42843-43033)
[»] scaffold0360 (1 HSPs)
scaffold0360 (10-210)||(15260-15468)
[»] scaffold0957 (1 HSPs)
scaffold0957 (10-223)||(2383-2595)
[»] scaffold0047 (1 HSPs)
scaffold0047 (9-172)||(19041-19205)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-223)||(372856-373064)
[»] scaffold0155 (1 HSPs)
scaffold0155 (133-204)||(33554-33625)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 16485702 - 16485918
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||    
T  16485702 aagggtgcgtttgatttgataaagaatgaaggacatgatagaacaatttcagttgtccagtgtttgatttgtaaaatagtttcagggacatgacaaattg 16485801  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
     ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16485802 aaggcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtataagttttctaaaatacaaaaatagca 16485901  T
Q  207 tttcgtcacccaaaaat 223  Q
    |||||||||||||||||    
T  16485902 tttcgtcacccaaaaat 16485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 35225873 - 35225658
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||| | || |||||||    
T  35225873 agggtgcgtttgatttgataaaaaatgaaggataggacagaacaactccagttgtccagtgtttggtttgtaaaacagtttcagggacaggacaaactgg 35225774  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||| |||||||||||||||||||||    
T  35225773 aggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtctaaaatacaaaaatagcat 35225674  T
Q  208 ttcgtcacccaaaaat 223  Q
    ||||||||||||||||    
T  35225673 ttcgtcacccaaaaat 35225658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 15001671 - 15001463
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| | || |||||||||||||    
T  15001671 cgtttgatttgataaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaa 15001572  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
      ||||| | |||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||    
T  15001571 tagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattt-gtc 15001473  T
Q  214 acccaaaaat 223  Q
     |||||||||    
T  15001472 ccccaaaaat 15001463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 41709990 - 41709773
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||    
T  41709990 taagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 41709891  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||||||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  41709890 ggaggcaaatgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatagc 41709791  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  41709790 attttgtccctcaaaaat 41709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 29610952 - 29611163
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||  |||||||||| |  | ||||||||||    
T  29610952 gtgcgtttgatttgttaaaaaatgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggagg 29611051  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||| || |||||||||||||    
T  29611052 caagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacaccaaaatagcatttc 29611151  T
Q  211 gtcacccaaaaa 222  Q
    ||| ||||||||    
T  29611152 gtcccccaaaaa 29611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 31513477 - 31513678
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||| ||| |||||||||||||||||| |||||||| | |||| |||||||    
T  31513477 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactgg 31513576  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  31513577 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcat 31513676  T
Q  208 tt 209  Q
    ||    
T  31513677 tt 31513678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 37618286 - 37618503
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| || | ||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||| | | || ||| |||    
T  37618286 agggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaattgg 37618385  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||| ||||||| ||||||||  ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| | | |||||| ||||||||||    
T  37618386 aggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgttttaaataccaaaatagcat 37618485  T
Q  208 ttcgtcacccaaaaattg 225  Q
    |||||| |||||||||||    
T  37618486 ttcgtcccccaaaaattg 37618503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 39643094 - 39642877
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||  |||||||| | | || |||||||    
T  39643094 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactgg 39642995  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| |||||||||||  ||||||||||||| |||||||||| ||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  39642994 aggcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaataccaaaatagcat 39642895  T
Q  208 ttcgtcacccaaaaattg 225  Q
    ||| || |||||||||||    
T  39642894 ttcatcccccaaaaattg 39642877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 34063341 - 34063124
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||   ||||||| | | || |||||    
T  34063341 taagagtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaact 34063242  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  34063241 ggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 34063142  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  34063141 attttgtccctcaaaaat 34063124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 8672953 - 8673164
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| |||||||||||||||| |||||||  |||||||| |||||||||||||||||  |||||||| | |||| |||||||||||    
T  8672953 tgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggc 8673052  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  8673053 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttg 8673152  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  8673153 tccctcaaaaat 8673164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 30542916 - 30543131
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||||  |||||||| | |||| |||||||    
T  30542916 agggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgg 30543015  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| |||||||||| |||| ||||||||||| |||||||||| |||||| |||    
T  30543016 aggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctaaaataccaaaataacat 30543115  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  30543116 tttgtcccccaaaaat 30543131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 4052690 - 4052476
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||| ||||    
T  4052690 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattgga 4052591  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  4052590 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 4052491  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  4052490 ttgtccctcaaaaat 4052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 7591339 - 7591556
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| | | || |||||    
T  7591339 taagggtgcgtttgttttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 7591438  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| ||||||||  |||||||| ||||  ||||||||| ||||||||||||||  ||||| ||||| |||||||||  ||||||||    
T  7591439 ggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaatatcaaaatagc 7591538  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| |||||||||    
T  7591539 attttgtcccccaaaaat 7591556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 41548829 - 41548614
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||  | |||| |||||||    
T  41548829 agggtgcgtttaatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactgg 41548730  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| ||||||||  |||||||| ||||  || |||||| ||||||||||||||| ||||||||||| |||||||||  |||||| |||    
T  41548729 aggcaagagacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacat 41548630  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  41548629 tttgtcccccaaaaat 41548614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 30501355 - 30501153
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||||||||| || |||||||||||||||||  |||||||| | | || ||||||||    
T  30501355 gggtgcgtttgatttgctaaaaaatgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactgga 30501256  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| ||||||    ||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||| ||||    
T  30501255 ggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatt 30501156  T
Q  209 tcg 211  Q
    |||    
T  30501155 tcg 30501153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 37664174 - 37664392
Alignment:
Q  6 taagggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    ||||||||||||||||||| |||| || ||||||||||||||||| ||||  |||||||| |||||||||||||||||  |||||||| | | || ||||    
T  37664174 taagggtgcgtttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 37664273  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    | |||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||    
T  37664274 tagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 37664373  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| | |||||||    
T  37664374 cattttgtcgctcaaaaat 37664392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 45446665 - 45446451
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| | |||| || ||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  45446665 gggtgcgtttgatttgctaaaaaatgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacacgacaaactgga 45446566  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||||||||||||||   |||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  45446565 ggcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 45446466  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  45446465 ttgtccctcaaaaat 45446451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 40389253 - 40389036
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||  |||||||||| || | ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||||| | | || |||||    
T  40389253 taagggtatgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 40389154  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||| ||||||| ||||||||  |||||| || ||| |||||||||||||||||||||||||| || |||||||| | | |||| | ||||||||    
T  40389153 ggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttgttttaaatgccaaaatagc 40389054  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  40389053 atttcgtcccccaaaaat 40389036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 10467272 - 10467060
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||| ||| | | || ||||||||||    
T  10467272 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggagg 10467173  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  |||| || ||||||||  |||||||| ||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||  ||||||||||||     
T  10467172 caagagacaagacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatttt 10467073  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  10467072 gtcccccaaaaat 10467060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 25478456 - 25478253
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||  |||||||| |||||| ||||||||||  |||||||| | | || |||||    
T  25478456 taagggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaact 25478357  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    |||| |||  ||||||| |||||||   |||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||||| |||||||     
T  25478356 ggagacaagggacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagt 25478257  T
Q  206 attt 209  Q
    ||||    
T  25478256 attt 25478253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 6386787 - 6386572
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||  ||| |||||||  |||||||| ||||||||||| |||||  |||||||| ||| || |||||||    
T  6386787 agggtgcgtttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttcaggtataggacaaactgg 6386688  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||| ||| || |||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||||||    
T  6386687 aggtaaaagataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcat 6386588  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  6386587 tttgtccctcaaaaat 6386572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 27104170 - 27103955
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||  |||||| |  ||||||||||||||||  |||||||| | | || |||||||    
T  27104170 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaactgg 27104071  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||  ||||||||||    
T  27104070 aggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcat 27103971  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  27103970 tttgtccctcaaaaat 27103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 12753217 - 12753434
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||| ||| |||||||||| |||| |||||||||||||||| |||||||  |||||||| ||||||||||||||| |  |||||||| | | || |||||    
T  12753217 taagagtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaact 12753316  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    | |||||||||||| || |||||||   |||||||| |||| |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||| |    
T  12753317 gaaggcaaatgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataac 12753416  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| |||||||||    
T  12753417 attttgtcccccaaaaat 12753434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 29672215 - 29672432
Alignment:
Q  7 aagggtgcgtttgatttgata-aagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||||||||||||| |  || ||||||||||| ||||||||||||  |||||||| |||||||||| ||||||  |||||||| | | || |||||    
T  29672215 aagggtgcgtttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaact 29672314  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
     |||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  29672315 agaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatagc 29672414  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  29672415 attttgtccctcaaaaat 29672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 34101720 - 34101504
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||    
T  34101720 aagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactg 34101621  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||  ||||  | |||||||   ||||||||||||| |||||||||| || |||||||| | | ||||||||||| |||||||||| |||||||||    
T  34101620 gaggcaagggacaacacaaaaactcatatttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagca 34101521  T
Q  207 tttcgtcacccaaaaat 223  Q
    ||| ||| | |||||||    
T  34101520 ttttgtccctcaaaaat 34101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 3251550 - 3251765
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||| ||||| | ||||||||||||  |||||||| ||||||||||| |||||  |||||||| | | || |||||||    
T  3251550 agggtgcgtttgatttgctaaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactgg 3251649  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||| | |||||||   ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||| |||    
T  3251650 aggcaagcgacagaacaaaaacttatatttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaataacat 3251749  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  3251750 tttgtccctcaaaaat 3251765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 32019893 - 32020110
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||  |||||| | |||||||||||||||||  |||||||| | | || |||||    
T  32019893 taagggtgcgtttgatttgctaaaaattgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 32019992  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||| ||||  |  |||| |||||||   |||||| |||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||     
T  32019993 ggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagt 32020092  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  32020093 attttgtccctcaaaaat 32020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 5968759 - 5968973
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||| ||||| |||| ||||||||| |||||| |||||||  |||||||| |||||||||||||||||  |||| ||| | |||| ||||| ||    
T  5968759 gggtgcgtttaatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactaga 5968858  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   |||||||||| || |||||||||||||||||||||| ||| |||||||| || |||||||||| |||||| ||||    
T  5968859 ggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaataacatt 5968958  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  5968959 ttgtccctcaaaaat 5968973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 13406834 - 13407044
Alignment:
Q  13 gcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggca 112  Q
    |||||||||||| |||| ||||||||| ||| ||||||||||  |||||||  |||||| ||||||||||  |||||||| |||||| ||||||||||||    
T  13406834 gcgtttgatttgctaaaaaatgaaggatagggcagaacaactctagttgtctagtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggca 13406933  T
Q  113 aatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgt 212  Q
    |   |||| | |||||||   ||||||||||||| ||||||||||||| || ||||||||  ||||||||||| |||||||||| |||||||||||| ||    
T  13406934 aggaacagaacaaaaactcatatttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgt 13407033  T
Q  213 cacccaaaaat 223  Q
      |||||||||    
T  13407034 gccccaaaaat 13407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 22999463 - 22999253
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    ||||||||||| |||| ||||||||||| |||||||||||| | ||||||| |||||||||||||||||  |||||||| | | || |||||||||||||    
T  22999463 cgtttgatttgctaaaaaatgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 22999364  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaac-tttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgt 212  Q
      ||||||| ||||||||  |||||||||||||  ||||||| |||| ||| ||||||||| |||||||| || |||||||||  |||||||||||| ||    
T  22999363 gagacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgt 22999264  T
Q  213 cacccaaaaat 223  Q
    |  ||||||||    
T  22999263 cctccaaaaat 22999253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 7394708 - 7394909
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||  ||||  |||||||| | |||| ||||| |    
T  7394708 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttacaaaactgtttcaggtacatgacaaactag 7394807  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||||| |||||||| | ||||||||||||||  ||||||||||| |||||||||| |||||| |||    
T  7394808 aggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacat 7394907  T
Q  208 tt 209  Q
    ||    
T  7394908 tt 7394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 14004943 - 14005139
Alignment:
Q  13 gcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggca 112  Q
    |||||||||||| |||| ||||||||| |||||| ||||| || |||||||| || ||||||||||||||  |||| ||| | | || ||||||||||||    
T  14004943 gcgtttgatttgctaaaaaatgaaggataggacataacaattttagttgtccagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggca 14005042  T
Q  113 aatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |  |||| || |||||||   |||||||||| || |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  14005043 agggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 14005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 37862068 - 37861869
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||| ||| | |||||  |||||| |  ||||||||| ||||||  |||||||| | | || ||||||||    
T  37862068 gggtgcgtttgatttgctaaaaaatgaaggacagaacata-caactctagttgttcaatgtttgattagtaaaactgtttcaggtacaggacaaactgga 37861970  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    ||||| |||||||| |||||||   |||||| |||||| |||||||||| || |||| ||||||||||||||||||| |||||||||| |||||||||||    
T  37861969 ggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtctaaaataccaaaatagcatt 37861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 45114263 - 45114051
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| ||||  |||||||||||||||  ||||||||| |||| | |||||||||||||||||  |||||||| | |  | ||||  || |    
T  45114263 gtgcgtttgatttgctaaaacatgaaggacaggacatgacaacttcaattgttcagtgtttgatttgtaaaactgtttcaggtacagaacaaacgagatg 45114164  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  || |||| |||||||   ||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||||||| |||||||||||||    
T  45114163 caagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaataccaaaatagcatttc 45114064  T
Q  211 gtcacccaaaaat 223  Q
    |||  ||||||||    
T  45114063 gtcctccaaaaat 45114051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 17520804 - 17520619
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    ||||| |||| ||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||| |||   |||||||| ||||    
T  17520804 gggtgtgtttaatttgctaaaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaagtgttttaggtgcatgataaaatgga 17520705  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata 195  Q
    |||||  ||||||  |||||||  |  ||||||||||| |||||||||| ||||||||||||||| || |||||||| || ||||||    
T  17520704 ggcaagggacagggcaaaaact-tatattttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtccaaaata 17520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 29563158 - 29563335
Alignment:
Q  46 agaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccct 145  Q
    |||||||||  |||| ||| |||||||||||||||||  |||||||| | | || ||||| |||||||  ||||||| |||||||   ||||||||||||    
T  29563158 agaacaactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccct 29563257  T
Q  146 cgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||| |||| ||| | |||||||    
T  29563258 caccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 29563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 37474911 - 37474756
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||| | |||||||||||| ||||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  37474911 agggtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 37474812  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaa 163  Q
    ||||||  ||||||| |||||||   |||||||||||||  |||||||||| ||||    
T  37474811 aggcaagagacaggacaaaaacttatatttttgtccctcagcaaaccacagtacaa 37474756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 31732257 - 31732060
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||              | || ||||| |||||    
T  31732257 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaa--------------acgacaaacttgaggc 31732172  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  |||| || |||||||   ||||||||||||| ||||||||||| |||||||||||||  || |||||||| |||||||||| |||||||||||| |    
T  31732171 aagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatagcattttg 31732072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 21272877 - 21272694
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| ||||||||||| |||| || |||||||||| |||||||| |||||||||||||||||  |||||||       ||| |         
T  21272877 gggtgcgtttgatttgctaaagaatgaatgacacgagagaacaactttagttgtccagtgtttgatttgtaaaactgtttcag-------ataca----- 21272790  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     ||    ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  21272789 -gc----gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcatt 21272695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 10656587 - 10656767
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||||| | ||||||||| ||| |||||| || |||||||||||||    ||| || || |||| ||||| ||||||||    
T  10656587 gtttgatttgctaaaaaatgaaggacatgtcagaacaacctcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaa 10656686  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata 195  Q
     ||||||| |||||||| | ||||||||| || | |||||||| ||||||||||||||  |||||||| || |||||||||    
T  10656687 agacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaaata 10656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 16595067 - 16595240
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||||| ||||| |||||  |||||||    ||||||||||||||| | ||||| |||| |  | |||||| ||||||  ||||||| ||||||     
T  16595067 aatgaaggacatgacaggacaacaccagttgtatattgtttgatttgtaaatt-gtttctgggacagaacaaactgtaggcaagggacaggacaaaaaca 16595165  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
      || ||||||||||||| || ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  16595166 tgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatacaaaaatagc 16595240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 32303588 - 32303694
Alignment:
Q  117 acaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacc 216  Q
    |||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| |     
T  32303588 acaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccct 32303687  T
Q  217 caaaaat 223  Q
    |||||||    
T  32303688 caaaaat 32303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 17805899 - 17805701
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||| ||||| | || |||||||||||  ||||| |||||  | |||| | |||||||||||||||||  |||||| | | | || ||||| ||||    
T  17805899 gtgcgtttaatttgtttaaaaatgaaggacataacagaccaactctaattgttcagtgtttgatttgtaaaactgtttcaagtacaggacaaactagagg 17805800  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  |||| || |||||||   |||||||| |||| |||||||| ||||||||| ||||||  ||||||||||| |||||||||| |||||| |||||    
T  17805799 caagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaataccaaaataacattt 17805701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 38047557 - 38047483
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  38047557 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaa 38047483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 10932919 - 10932751
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    ||||||| |||  |||||||||||||||  |||||||||||| |||||| ||||  |||| | || ||| | |||||||  |||| ||||||||||  ||    
T  10932919 aaggacaagaccaaacaacttcagttgtatggtgtttgatttataaaattgtttatgggacaagacaaagtagaggcaagagacatgataaaaactaaaa 10932820  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||| ||||||| | |||||||| |||||||||| || | |||||||| || |||||||||| |||||||    
T  10932819 tttt-gtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatag 10932751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 22756338 - 22756501
Alignment:
Q  41 aggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttg 140  Q
    |||||| ||||||| ||||| | |  ||||||||||||||||  ||||| |||||| || ||| | |||||||  |||| || ||||||   |||||||     
T  22756338 aggacaaaacaactccagttatacaatgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaattttta 22756437  T
Q  141 tccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||   | |||||| |||||||||||||   ||||||||||| ||||||||||||||||||    
T  22756438 tccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatag 22756501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 27109532 - 27109650
Alignment:
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  |||| ||||||| | |  |||||||| |||  |||||||||| |||||||||||||||  ||||||| || | |||||||| ||||||     
T  27109532 tggaggcaagggacatgataaaatcagatatttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataa 27109631  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||||||| |||||||||    
T  27109632 catttcgtcccccaaaaat 27109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 32303502 - 32303586
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    ||||||||||||||||| |||| || |||||| | || |||||||||| |||||| | |||||||||||||||||  ||||||||    
T  32303502 agggtgcgtttgatttgctaaaaaacgaaggaaatgatagaacaactttagttgttcagtgtttgatttgtaaaactgtttcagg 32303586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 54256 - 54189
Alignment:
Q  133 aatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    ||||||||||| | || |||||||| ||||||||||||||| || |||||||| || |||||||||||    
T  54256 aatttttgtcctttgctaaaccacatcacaactttttgtcccacatacaagttatcgaaaatacaaaa 54189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 5859518 - 5859567
Alignment:
Q  160 acaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatagtattt 5859567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 6460344 - 6460271
Alignment:
Q  137 tttgtccctcgccaaaccacagcacaact-ttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||||| ||| |||||||||| ||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||    
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattt 6460271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 15351903 - 15351820
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    |||||||||| ||||| |||| |||||| ||    ||||||||||| ||||| | | |||||||||||||||||| ||||||||    
T  15351903 gggtgcgtttcatttgctaaaaaatgaatgatgtaacagaacaactacagttatgccgtgtttgatttgtaaaattgtttcagg 15351820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 10320232 - 10320372
Alignment:
Q  67 tgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactt 166  Q
    ||||||||||||||||  |||| ||||| |||| ||||| ||| |||  ||| | | |||||| | |||| || |||||| |||||||||| ||||||||    
T  10320232 tgtttgatttgtaaaaccgttttagggacatgacaaacttgag-caagggac-gaaaaaaaacagaaattcttatccctcaccaaaccacaacacaactt 10320329  T
Q  167 tttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  |  ||||||||||| |||||||||  |||||| |||||    
T  10320330 tttaccacacgtacaagttgtctaaaatatcaaaataacattt 10320372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 32860262 - 32860047
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||| || |||||| ||||||||||||||||| ||||||||||| |||| |||||||    
T  32860262 agggtgcgtttgatttgataaaaaatgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaaacagtttcagggacatgacaaactgg 32860163  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||| ||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||    
T  32860162 aggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcacgtacaagttttctaaaatacaaaaataacat 32860063  T
Q  208 ttcgtcacccaaaaat 223  Q
    ||||||||||||||||    
T  32860062 ttcgtcacccaaaaat 32860047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 10485367 - 10485153
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||  ||||||| | | || ||||||||    
T  10485367 gggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacaggacaaactgga 10485268  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| ||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  10485267 ggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 10485168  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  10485167 ttgtcccccaaaaat 10485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 10960211 - 10959996
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||| ||||||||||| |||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||  |||||||| | | || ||||||     
T  10960211 agggtacgtttgatttgctaaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactga 10960112  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   |||||||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10960111 aggcaagggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcat 10960012  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  10960011 tttgtcccccaaaaat 10959996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 29054569 - 29054353
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||||||||||||||||||| |||||||||||| |||||| || |  || |||||  |||||||||||||||| ||||||||| | | || ||| |    
T  29054569 taagggtgcgtttgatttgataaaaaatgaaggacagaacagaataattaaagctgtccaatgtttgatttgtaaaacagtttcaggaacaggacaaatt 29054470  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||| ||||  |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||| |    
T  29054469 ggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatac-aaaataac 29054371  T
Q  206 atttcgtcacccaaaaat 223  Q
    ||||||||||||||||||    
T  29054370 atttcgtcacccaaaaat 29054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 11613709 - 11613924
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||| | | || ||| |||    
T  11613709 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaatgg 11613808  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    || |||   |||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  11613809 agacaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcat 11613908  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  11613909 tttgtccctcaaaaat 11613924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 17868046 - 17867831
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  || ||||| |||||||||||||||||  |||||||| | | || |||||||    
T  17868046 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 17867947  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| ||||||||||   |||||||||||||  ||||||||||||||||||||||||| |||||||| || |||||||||| ||||||||||    
T  17867946 aggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcat 17867847  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  17867846 tttgtccctcaaaaat 17867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 17877829 - 17877614
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  || ||||| |||||||||||||||||  |||||||| | | || |||||||    
T  17877829 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 17877730  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| ||||||||||   |||||||||||||  ||||||||||||||||||||||||| |||||||| || |||||||||| ||||||||||    
T  17877729 aggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcat 17877630  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  17877629 tttgtccctcaaaaat 17877614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 2615109 - 2614892
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||| || |||||||||| |||| ||||||||||| ||||||||||||  ||||||||  ||||||||||||||||| |||||||| | | || ||| |    
T  2615109 taaggatgtgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaatt 2615010  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  2615009 ggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 2614910  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  2614909 attttgtccctcaaaaat 2614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 24203573 - 24203372
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||| ||| | | || |||||||    
T  24203573 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactgg 24203474  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    
T  24203473 aggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacat 24203374  T
Q  208 tt 209  Q
    ||    
T  24203373 tt 24203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 34177043 - 34176826
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||   ||||||||||||||||  |||||||| | |||| |||||    
T  34177043 taagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtcacttgtttgatttgtaaaactgtttcaggtacatgacaaact 34176944  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    |||||||| ||||| || |||||||   ||||||||| ||| ||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||||||    
T  34176943 ggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaataccaaaatagc 34176844  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  34176843 attttgtccctcaaaaat 34176826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 3259890 - 3259679
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||    
T  3259890 tgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 3259791  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||||| |    
T  3259790 aagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttg 3259691  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  3259690 tccctcaaaaat 3259679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 9902580 - 9902791
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||||||| | |||||| ||||||  ||  |||||||| ||| || ||||| ||||     
T  9902580 tgcgtttgatttgctaaaaaatgaaggataggatagaacaacttcagttgttcagtgtttaatttgttgaactgtttcaggtataggacaaactagaggt 9902679  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| ||||||||  |||||||||||||   |||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||||    
T  9902680 aagggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcg 9902779  T
Q  212 tcacccaaaaat 223  Q
    || |||||||||    
T  9902780 tcccccaaaaat 9902791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 15277198 - 15277413
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||| |||| |||| |||||||  | |||||| |||||||||||||||||| |||| ||| | | || |||||||    
T  15277198 agggtgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaaattgtttaaggtacaggacaaactgg 15277297  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||    
T  15277298 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcat 15277397  T
Q  208 ttcgtcacccaaaaat 223  Q
    || |||  ||||||||    
T  15277398 tttgtcttccaaaaat 15277413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 14925375 - 14925589
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||| | |||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||  |||||||| | | || ||||| ||    
T  14925375 gggtgcgtttgattcgttaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactaga 14925474  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     | ||  ||||||| |||||||   ||||||||||||| ||||||||||| |||||||||||||| || |||||||| |||||||||| |||||||||||    
T  14925475 tgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaataccaaaatagcatt 14925574  T
Q  209 tcgtcacccaaaaat 223  Q
     |||| || ||||||    
T  14925575 ccgtcccctaaaaat 14925589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 18597079 - 18597291
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||| |||  |||||| ||||||||| | |||||||||||||||||  ||||||||||||||| |||| |||||    
T  18597079 gtgcgtttgatttgttaaaaaatgaaggacgggattgaacaatttcagttgttcagtgtttgatttgtaaaactgtttcagggatatgacaaaccggagg 18597178  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  |||| || |||| ||| |||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| |||||||  | ||||||| | |||    
T  18597179 caagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaacgctaaaatagtacttc 18597278  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  18597279 gtccctcaaaaat 18597291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 3932729 - 3932940
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| |||||||||||||||||||||| |  |||||| | |||||||||||||||||  |||||||| | | || |||||||||||    
T  3932729 tgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 3932828  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  | ||||| |||||||   ||||||||| ||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| ||||| |    
T  3932829 aaggggcaggacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttg 3932928  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  3932929 tccctcaaaaat 3932940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 11279333 - 11279138
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    ||||||||||| |||| |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||  |||||| | | | || ||||||||||||     
T  11279333 cgtttgatttgctaaaaaatgaaagacgggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcat 11279234  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
      ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||||||||    
T  11279233 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 11279138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 11382272 - 11382060
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||  |||||||| | | || ||||||||    
T  11382272 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactgga 11382173  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||  ||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||||||    
T  11382172 ggcaagggacaggacaaaaactcatatttttgt--ctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcatt 11382075  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  11382074 ttgtccctcaaaaat 11382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 32409767 - 32409985
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||| ||||  |||| ||| |||||||||||||||||  |||||||| | | || ||||    
T  32409767 ataagggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 32409866  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||| |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||  ||||||| |||||||||| |||||||    
T  32409867 tggagacaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatag 32409966  T
Q  205 catttcgtcacccaaaaat 223  Q
     |||| ||| | |||||||    
T  32409967 tattttgtccctcaaaaat 32409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 166845 - 167046
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||| | ||||||||||||  | |||||| |||||||||||||||||  |||||||| | | || ||||| |||||    
T  166845 tgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggc 166944  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||  | |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  166945 aagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcg 167044  T
Q  212 tc 213  Q
    ||    
T  167045 tc 167046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 31870013 - 31870231
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataa--- 102  Q
    ||||||||||||||||||| |||| |||||||||| ||||| ||||||| ||||||||| |||||||||||||||||  || ||||| | |  | ||       
T  31870013 taagggtgcgtttgatttgctaaaaaatgaaggactggacataacaactccagttgtccagtgtttgatttgtaaaactgtctcaggaacaacagaacaa 31870112  T
Q  103 actggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaat 202  Q
    ||| |||||||  ||||  | ||||||||  ||||||||||||| |||||||||| ||||||||||||||| ||||| | ||| ||||||||||||||||    
T  31870113 actagaggcaagggacaaaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaat 31870212  T
Q  203 agcatttcgtcacccaaaa 221  Q
    ||||||||||| |||||||    
T  31870213 agcatttcgtcccccaaaa 31870231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 15276855 - 15277070
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||||||| |||| ||||||||||| ||||||||||||  |||||||   ||||||||||||||||  |||||||| | | || |||||||    
T  15276855 agggtgcatttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaactgg 15276954  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| ||||||| |  ||||||||||    
T  15276955 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttgtctaaaagaacaaaatagcat 15277054  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  15277055 tttgtccctcaaaaat 15277070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 3379920 - 3379706
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||| ||||||||||| |||| ||||||||||| || |||||||||| |||||||| ||||||||||| |||||  |||||||  | | || ||||||||    
T  3379920 gggtacgtttgatttgctaaaaaatgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttcagatacaggacaaactgga 3379821  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || ||||||||  ||||||||| ||| |||||||| ||||||||||||||||  || |||||||| ||| |||||| |||||||||||    
T  3379820 ggcaagagacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaataccaaaatagcatt 3379721  T
Q  209 tcgtcacccaaaaat 223  Q
    |||||  ||||||||    
T  3379720 tcgtcctccaaaaat 3379706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 10324035 - 10324244
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    ||||||||||| |||| |||||||||||| |||||||||||  |||||| | |||||| ||||||||||  |||||||| | | || ||||| |||||||    
T  10324035 cgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaa 10324134  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
      ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||| ||||| |||    
T  10324135 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtc 10324234  T
Q  214 acccaaaaat 223  Q
     || ||||||    
T  10324235 cccaaaaaat 10324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 17443466 - 17443258
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||||||||     |||| |||||||| |||||||||||||||||   ||||||| | | || ||||| ||     
T  17443466 ggtgcgtttgatttgctaaaaaatgaaggacaggaca-----actttagttgtccagtgtttgatttgtaaaaccatttcaggtacaggacaaactagat 17443372  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   |||||| |||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  17443371 gcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 17443272  T
Q  210 cgtcacccaaaaat 223  Q
    ||||  ||||||||    
T  17443271 cgtcctccaaaaat 17443258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 8177803 - 8178014
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    ||||| |||||||| |||| ||| ||||||| || | |||||||||| || ||||||||||||||| |||||  |||||||| | |  | ||||||||||    
T  8177803 gtgcgattgatttgctaaaaaataaaggacatgaaaaaacaacttcaattatccggtgtttgatttataaaactgtttcaggtacaaaacaaactggagg 8177902  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||||||||| ||  ||||||||||||  |||||||||| ||||||||||||||| |||| |||||| |||||||||| |||||| ||||||    
T  8177903 caagggacaggataaaaa-tgatatttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaataacatttc 8178001  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  8178002 gtcccccaaaaat 8178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 18057729 - 18057525
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||| | |||| |||||||||||||| || ||||||||| ||||||  ||||||||||||||||  |||| ||  | |||| ||||| ||    
T  18057729 gggtgcgtttgattcgctaaaaaatgaaggacaggataggacaacttcaattgtccaatgtttgatttgtaaaactgtttgagatacatgacaaactaga 18057630  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     | ||  |||| || |||||||   ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  18057629 tgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 18057530  T
Q  209 tcgtc 213  Q
    |||||    
T  18057529 tcgtc 18057525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 11675290 - 11675507
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||  || |||| |||| ||||| | ||||||| | |||||||||||||||||  |||||||| | | || |||||    
T  11675290 taagggtgcgtttgatttgctaaaaaaataaagacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 11675389  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||| ||||||| ||||||||  ||||||||| ||| |||||||| | ||||||||||| ||| ||||||||| ||| ||||||||  |||| ||    
T  11675390 ggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactttttatcccacgtacaagctttgtaaaatacctaaatggc 11675489  T
Q  206 atttcgtcacccaaaaat 223  Q
    || ||||| |||||||||    
T  11675490 atctcgtcccccaaaaat 11675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 24242840 - 24242660
Alignment:
Q  43 gacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtc 142  Q
    ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||  ||||  | |||||||   |||||||||    
T  24242840 gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtc 24242741  T
Q  143 cctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  24242740 cctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 24242660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 32132347 - 32132513
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccac 156  Q
    |||||||| |||||||||||||||||  |||| ||| | | || |||||||||||||  ||||||| |||||||   ||||||||||||| |||| ||||    
T  32132347 agttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccac 32132446  T
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | ||||||||||||||| ||||||||||| |||||||||  |||||||||||| ||| |||||||||    
T  32132447 aacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 32132513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 23636434 - 23636217
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||| ||||||||||| |||| ||||||||| | |||||||||||||||||||| | |||||||||||||||||| |||| ||| | ||||||||||||    
T  23636434 agggtacgtttgatttgctaaaaaatgaaggatatgacagaacaacttcagttgttcagtgtttgatttgtaaaattgttttaggtacatgataaactgg 23636335  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    | ||||   | ||||||||||||   ||||||||   ||   |||||||| ||||| ||||||||  ||||||||||| | |||||  | ||||||||||    
T  23636334 atgcaaggaataggataaaaactcatatttttgttattcattaaaccacaacacaaatttttgtctcacgtacaagttatttaaaaatccaaaatagcat 23636235  T
Q  208 ttcgtcacccaaaaattg 225  Q
    |||||| ||| |||||||    
T  23636234 ttcgtccccccaaaattg 23636217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 11212465 - 11212253
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||| |||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||     
T  11212465 gtgcgtttgatttgctaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaga 11212366  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
     ||  |||| || |||||||   | ||||||||||| |||||||||| || ||| |||||||  |||| |||||| |||||||||| |||||| |||||     
T  11212365 taagggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacatttt 11212266  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  11212265 gtccctcaaaaat 11212253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 7396048 - 7396239
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||  ||||||||||| |||| ||||| |||||||||  |||||||||||||||||   ||||| |||| |||| || ||||| ||    
T  7396048 tgcgtttgatttgctaagaaatgaaggacatgacaaaacaatttcagttgtatggtgtttgatttgtaaagctgtttctgggacatgacaagctggaagc 7396147  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||  ||||||| |||||| | || | ||||||||| | |||||||  ||||||||||||||  ||||||||||| ||||||||||||||||||    
T  7396148 aatggacaggacaaaaacag-aaatcttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatctaaaatacaaaaatag 7396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 4494081 - 4494249
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgca-atttttgtccctcgccaaacca 155  Q
    |||||||| ||||||||||||||| |   ||||||| | | || ||||||||||||| |||||||| |||||   || ||||||||||||| ||||||||    
T  4494081 agttgtccagtgtttgatttgtaagactctttcaggtacaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaacca 4494180  T
Q  156 cagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaatt 224  Q
    ||| |||||||||||||| ||||||||||| ||||||||||  ||||| ||||| ||| || |||||||    
T  4494181 cagtacaactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtccccaaaaaatt 4494249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 3290868 - 3290668
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||  |||||| | |||||||||||||| ||  || |||           ||||||||    
T  3290868 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtataactgtgtca-----------aactggag 3290780  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   ||||||||||||  |||||||||| ||||||||||  ||| ||||| ||||| |||||||||| ||||||||||||    
T  3290779 gcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtctaaaataccaaaatagcattt 3290682  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  3290681 tgtccctcaaaaat 3290668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 14807939 - 14808133
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||                 ||||||| ||||    
T  14807939 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa-----------------ataaactagagg 14808021  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  || |||||||||| ||  ||||||||||||| |||||||||| ||||||||||||||| ||||| | ||| ||| || ||| |||||| ||||||    
T  14808022 caagggataggataaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtct-aagtaccaaaataacatttc 14808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 14925136 - 14925215
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagttt 88  Q
    |||||||||||||||| |||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||| ||||    
T  14925136 gggtgcgtttgatttgctaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaattgttt 14925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 34683991 - 34684117
Alignment:
Q  96 atgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttct-aaaat 194  Q
    |||| |||||||||||||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||||| | ||||||||||| ||| |||||    
T  34683991 atgacaaactggaggcaagggacacgacaaaaactc--atttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaat 34684088  T
Q  195 acaaaaatagcatttcgtcacccaaaaat 223  Q
    || |||||||||||| |||  ||||||||    
T  34684089 accaaaatagcattttgtcctccaaaaat 34684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33041472 - 33041403
Alignment:
Q  13 gcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    |||||||||||| |||| ||||||| | |||||||||||||| ||||||||| |||||||||||||||||    
T  33041472 gcgtttgatttgttaaaaaatgaagaataggacagaacaactccagttgtccagtgtttgatttgtaaaa 33041403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 9614177 - 9613990
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    |||||| || |||| |||||||||||  |||  | |||||||||||| |  ||||||||||||||||  |||||| ||| | ||||||||||||||||      
T  9614177 tttgatctgctaaaaaatgaaggacataacaagaaaacttcagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagg 9614078  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    |||| || ||||  || | |||||||  ||| | ||||| || ||||| ||||||| | ||||| ||||| |||||||||| ||||||    
T  9614077 gacatgacaaaatttgaagtttttgttactcactaaaccgcaacacaattttttgttccacgtataagttgtctaaaatactaaaata 9613990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 204
Target Start/End: Original strand, 35004087 - 35004242
Alignment:
Q  49 acaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgc 148  Q
    |||||| ||||||| |||||||||||||||||||  ||||   ||| | ||||||| |||| |||  |||| || |||||||  | |||||||| |||      
T  35004087 acaactccagttgtgcggtgtttgatttgtaaaacggtttataggacaagataaaccggagacaagagacaagacaaaaactaaattttttgtctctcat 35004186  T
Q  149 caaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
      ||||||| ||||||| ||||||| |||||||||||||||||||||  |||||||    
T  35004187 ataaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatag 35004242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 27824712 - 27824765
Alignment:
Q  152 accacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    |||||| ||||||||||||||| |||||| |||| || ||||||||||||||||    
T  27824712 accacatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagc 27824765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 29424613 - 29424681
Alignment:
Q  136 ttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||| || | |||| ||| ||||| |||| | |||||||||||||| ||||||||||||||||||    
T  29424613 ttttgtccatcactaaacgacaacacaatttttagacctacgtacaagttatctaaaatacaaaaatag 29424681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 34402992 - 34402919
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    |||||||||| |||| |||| |||||| ||||||||||||||| |||||| |    ||||||||||||| ||||||||    
T  34402992 gtttgatttgttaaaaaatggaggacaagacagaacaacttcaattgtccag----tgatttgtaaaattgtttcagg 34402919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 13415928 - 13415860
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaat 83  Q
    |||||||||| |||| || ||| ||||| ||| |||||||  |||||| | ||||||||||||||||||    
T  13415928 gtttgatttgctaaaaaacgaaagacagaacataacaactctagttgtacagtgtttgatttgtaaaat 13415860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 28068980 - 28068824
Alignment:
Q  48 aacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcg 147  Q
    ||||||| || ||||  ||||||||||||||||||| | || ||||| || | ||| |||||| ||  ||| ||| | ||| || |||| ||||||||      
T  28068980 aacaactacaattgtaaggtgtttgatttgtaaaattggtttagggaaataacaaaatggaggtaagggacgggacataaagtgaaattcttgtccctta 28068881  T
Q  148 ccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    | |||| |||  |||| |||||||| |||||||||||  | |||||||| |||||||    
T  28068880 ctaaacaacaatacaattttttgtcttacgtacaagtggtataaaataccaaaatag 28068824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 38992953 - 38993165
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||| ||||||||||||||||| ||||||||| | | || ||||||||||    
T  38992953 gtgcgtttgatttgataaaaaatgaaggacatgacagaataactccagttgtccagtgtttgatttgtaaaacagtttcaggaagaggacaaactggagg 38993052  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| ||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  38993053 caagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcatttc 38993152  T
Q  211 gtcacccaaaaat 223  Q
    |||||||||||||    
T  38993153 gtcacccaaaaat 38993165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 6896378 - 6896166
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |  | ||||||||    
T  6896378 gggtgcgtttgatttgttaaaaaatgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactgga 6896279  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| || |||||||||||    
T  6896278 ggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatt 6896179  T
Q  209 tcgtcacccaaaa 221  Q
    ||||| |||||||    
T  6896178 tcgtcccccaaaa 6896166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 7761452 - 7761667
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | |||| ||||| |    
T  7761452 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactag 7761551  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||    
T  7761552 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcat 7761651  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  7761652 tttgtccctcaaaaat 7761667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 34339021 - 34338806
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  34339021 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 34338922  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||| ||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||    
T  34338921 aggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttgtctaaaataccaaaatagcat 34338822  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  34338821 tttgtccctcaaaaat 34338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 9732810 - 9733024
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  9732810 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 9732909  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  9732910 ggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 9733009  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  9733010 ttgtccctcaaaaat 9733024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 32766381 - 32766599
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| || ||||||||| |||||||||||  | |||||| |||||||||||||||||  |||||||| | |||| |||||    
T  32766381 taagggtgcgtttgatttgctaaaaaacgaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaact 32766480  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaac-tttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||||  ||||||| ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||| ||| |||||||||| ||||||     
T  32766481 ggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggttgtctaaaataccaaaataa 32766580  T
Q  205 catttcgtcacccaaaaat 223  Q
    |||||||||  ||||||||    
T  32766581 catttcgtcctccaaaaat 32766599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 33889456 - 33889239
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||  |||||||  |||||||||||||||||| |||||||  | | || |||||    
T  33889456 taagggtgcgtttgatttactaaaaaatgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaaattgtttcagatacaggacaaact 33889357  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   |||||| |||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |    
T  33889356 ggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataac 33889257  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  33889256 attttgtccctcaaaaat 33889239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 2644968 - 2645166
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  2644968 ggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 2645067  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    || || || |||| |||||||   ||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||| ||||||||||||    
T  2645068 gc-aaggagaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattt 2645166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 18686045 - 18685832
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  18686045 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 18685946  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||| |||| || |||||||   ||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||  |||||| |||||    
T  18685945 gcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaataacattt 18685846  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  18685845 tgtccctcaaaaat 18685832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 19513566 - 19513783
Alignment:
Q  7 aagggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||| ||||||| ||||| |||| || ||||||||||||||||||||||  |||| |||  ||||||||||||||||  |||||||| | | || ||||     
T  19513566 aaggatgcgtttcatttgctaaaaaaatgaaggacaggacagaacaactctagttttccaatgtttgatttgtaaaactgtttcaggtacaggacaaacg 19513665  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||| ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  19513666 ggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 19513765  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  19513766 attttgtccctcaaaaat 19513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 30326214 - 30326425
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||||||||||| |||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  30326214 gtgcgtttgatttgctaaaaaatgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 30326313  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    ||   ||||||| ||||||| ||  ||||||| |||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| ||||     
T  30326314 caggggacaggacaaaaact-catattttgtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtatttt 30326412  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  30326413 gtccctcaaaaat 30326425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 37308864 - 37308665
Alignment:
Q  11 gtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||||||||||||| |||| || ||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  37308864 gtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 37308765  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| |||||||| || |||||||||| ||||||| ||||    
T  37308764 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaatagtattt 37308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 17540924 - 17540710
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||||| || | |||||||||| || |||||||| |||||||||||||||||  |||||| | | | || |||||||||    
T  17540924 ggtgcgtttgatttgttaaaaaatgaaagatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggag 17540825  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata-caaaaatagcatt 208  Q
    ||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||    
T  17540824 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaaatagtatt 17540725  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  17540724 ttgtccctcaaaaat 17540710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 30798370 - 30798583
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||  |||||||| |||||||||||||||||  |||||||| | |||| |||||||||    
T  30798370 ggtgcgtttgatttgctaaaaaatgaagggcag-acagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggag 30798468  T
Q  110 gcaaatgacaggataaaaactgca-atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    ||||  ||||||| |||||   || ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||||    
T  30798469 gcaagggacaggaaaaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcatt 30798568  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  30798569 ttgtccctcaaaaat 30798583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 7259104 - 7258907
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  || ||||  |||||||||||||||||  |||||||| | | || |||||||||||    
T  7259104 tgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 7259005  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| |||||| |||||    
T  7259004 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattt 7258907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 28824437 - 28824653
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||| | |  | | ||||||    
T  28824437 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacagcacatactgga 28824536  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    | |||  | ||||| |||||||   ||||||||||||| |||||||||| ||||||||||| ||  |||| |||||| |||||||||| |||||||||||    
T  28824537 gtcaagggtcaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatactaaaatagcatt 28824636  T
Q  209 tcgtcacccaaaaattg 225  Q
    |||   |||||||||||    
T  28824637 tcgcaccccaaaaattg 28824653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 3913337 - 3913540
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||| ||||| |  |||||||| |||||||||||||||||  |||||||| |||||| |||||    
T  3913337 taaggatgcgtttgatttgctaaaaaataaaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaact 3913436  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||   |||||| |||||||   || |||||||||| |||||||||| ||||||||||||| | ||||||||||| |||||||||| ||||||||    
T  3913437 ggaggcaagaaacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagc 3913536  T
Q  206 attt 209  Q
    ||||    
T  3913537 attt 3913540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 44284836 - 44284625
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| | |||||||||||||||||  |||||||| | | || |||||||||||    
T  44284836 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggc 44284737  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  |||| || |||||||   ||||||||||||| | |||||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||| |    
T  44284736 aagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcattttg 44284637  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  44284636 tccctcaaaaat 44284625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 32498123 - 32497925
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||| || | ||||||||||  |||||||| |||||||||||||||||  |||||||| | |||| |||||| |||    
T  32498123 gtgcgtttgatttgctaaaaaatgaagggcatggcagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaagg 32498024  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  ||||||| |||||||   |||||||| |||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  32498023 caagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 32497925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 5278720 - 5278914
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    ||||||||||| |||| ||| ||||| | ||||||||||||  | ||||  ||||||||||||||||||  |||||||| | |||| |||||||||||||    
T  5278720 cgtttgatttgctaaaaaat-aaggatatgacagaacaactctaattgttaggtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaa 5278818  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
      ||||||| |||||||   ||||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||    
T  5278819 gggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 5278914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 16177762 - 16177977
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| ||||||||| | |||| ||||||| || |||||| |||||||||||||||||  |||||| | | | ||||||||||    
T  16177762 agggtgtgtttgatttgctaaaaaatgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgtttcaagtacaggataaactgg 16177861  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| | ||||||  ||||||||| ||  |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||| | ||    
T  16177862 aggcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatggaat 16177961  T
Q  208 ttcgtcacccaaaaat 223  Q
    |||||| |||||||||    
T  16177962 ttcgtcccccaaaaat 16177977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 35114988 - 35114781
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| ||||||||||| ||||| ||||||  |||||||  |||||||||||||||||  |||||||| | | || ||||| |||||||      
T  35114988 tttgatttgctaaaaaatgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 35114889  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
    ||||||| |||||||   ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||| |||||||||| |||||||||||| ||| |    
T  35114888 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 35114789  T
Q  216 ccaaaaat 223  Q
     |||||||    
T  35114788 tcaaaaat 35114781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 38623181 - 38623365
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||| |||||||||| |||| | ||||||||| |||| ||||||||||||| |||  ||||||||||||||||  |||||||||| | || |||||    
T  38623181 taagggtgtgtttgatttgttaaaaattgaaggacatgacataacaacttcagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaact 38623280  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttcta 190  Q
     |||||||  || | || |||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||    
T  38623281 tgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtcta 38623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 40692507 - 40692321
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||| |||||| |||  |||| ||| | | || ||||||||    
T  40692507 gggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactgga 40692408  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata 195  Q
    | |||  ||||||| |||||||   ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  40692407 gacaagggacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 40832349 - 40832563
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||| ||| ||||| |||| || |||| ||| |||| |||||||| |||||||| ||||||||||||||||    ||||||| | | || ||||||||    
T  40832349 gggtgcttttaatttgctaaaaaaggaagcacatgacataacaacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactgga 40832448  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||| |  ||||||||||||| |||||||||| ||||||||||||||  ||||||||||  |||||||||| ||||||| |||    
T  40832449 ggcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagtatt 40832548  T
Q  209 tcgtcacccaaaaat 223  Q
    ||||| |||||||||    
T  40832549 tcgtcccccaaaaat 40832563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 16104459 - 16104270
Alignment:
Q  34 gaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgca 133  Q
    |||||| ||||||||||||||  |||||||| |||||||||||||||||  |||||||  | | || ||| |||||||||  ||||||| |||||||       
T  16104459 gaaggataggacagaacaactatagttgtccagtgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggacaggacaaaaactcat 16104360  T
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||| || |||||||||| |||||||||||| ||| | |||||||    
T  16104359 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 16104270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 42706543 - 42706355
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    |||||||||||||||||| |  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||  || | || |||||||   |    
T  42706543 aaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcata 42706444  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||||||||| ||| | |||||||    
T  42706443 tttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 42706355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 201
Target Start/End: Original strand, 26981606 - 26981781
Alignment:
Q  26 taaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataa 125  Q
    |||| |||||||||||| ||||||||||| ||||||||| |||||||||||||||||  ||| |||  | | || |||| |||||||||||||| || ||    
T  26981606 taaaaaatgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgacatgacaa 26981705  T
Q  126 aaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaa 201  Q
    |||||   ||||||||||||| |||||||||| || |||||||||| ||||||||||||| |||||||||| ||||    
T  26981706 aaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 33366821 - 33366606
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| ||||||||| | |||||||||| |  | |||||| |||||||||||||||||  |||||||| | | || |||||||    
T  33366821 agggtgtgtttgatttgctaaaaaatgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 33366722  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   |||||||| |||| |||||||||| ||||||||||| ||| || |||||||| |||||||||| |||||| |||    
T  33366721 aggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttgtctaaaataccaaaataacat 33366622  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  33366621 tttgtccctcaaaaat 33366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 208
Target Start/End: Original strand, 41365992 - 41366189
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| | ||||  ||| || ||||||||| || |||| |  |||||||||||| ||| ||||||||||| |||| ||||||||||    
T  41365992 gtgcgtttgatttgctaaaaactgaaaaacaagatagaacaactccaattgtgcaatgtttgatttgtgaaacagtttcagggacatgacaaactggagg 41366091  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||  || |||| |||||||| |||||||||||||| |||||||||| ||||| ||||||||  || |||||||| |||||||||| |||||| ||||    
T  41366092 caagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaaataccaaaataacatt 41366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 39461518 - 39461310
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| |||||||||||||| ||||||| || |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||     
T  39461518 gtttgatttgctaaaaaatgaaggacaggatagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 39461419  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaa---accacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    |||||||| ||||| ||   |||||||||||| ||||   || ||| ||||||||||| ||  ||||||||| | |||||||||| |||||||||||| |    
T  39461418 tgacaggacaaaaattg---tttttgtccctcaccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttg 39461322  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  39461321 tccctcaaaaat 39461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 42365788 - 42365573
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| ||||||||||| |||| |||||||  |||||||  |||||||||||||||||  |||||||| | |||| |||||||    
T  42365788 agggtgtgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaaccgtttcaggtacatgacaaactgg 42365689  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   |||||||||| ||  ||||||||| ||||||||||| |   ||| ||||||| |||||||||| |||||| |||    
T  42365688 aggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtctaaaataccaaaataacat 42365589  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| || ||||||    
T  42365588 tttgtcccctaaaaat 42365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 11115081 - 11114878
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| |||||||||||||||| ||||||| || ||||||  ||||||||||||||| |   |||||  | | || |||||||    
T  11115081 agggtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactccaattgtccaatgtttgatttgtaaactg--ttcagttacaggacaaactgg 11114984  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| ||||| |   |||||||| |||| |||||||||| ||||||||||||||| ||| ||||||| |||||||| | ||||||| ||    
T  11114983 aggcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatagtat 11114884  T
Q  208 ttcgtc 213  Q
    ||||||    
T  11114883 ttcgtc 11114878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 13829636 - 13829434
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| ||||||||||||| ||| ||            || ||||||||    
T  13829636 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtgaaacag------------gacaaactgga 13829549  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    || ||  ||||||| |||||||| ||||||||||| || | | |||||| ||||||||||||||| | ||||||||| ||||||| || |||||| ||||    
T  13829548 ggtaagggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacaccaaaatatcatt 13829449  T
Q  209 tcgtcacccaaaaat 223  Q
    ||||| | |||||||    
T  13829448 tcgtccctcaaaaat 13829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 12672402 - 12672568
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccac 156  Q
    |||||||| |||||||||||||||||  |||||||| ||| || |||||||||||||  ||| ||| |||| ||   ||||||||||||| |||||||||    
T  12672402 agttgtcctgtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacgggacaaaatctcatatttttgtccctcaccaaaccac 12672501  T
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | ||||| ||||| ||| | ||||||||| |||||||||| |||||||||||| |||  ||||||||    
T  12672502 aacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaat 12672568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 30713067 - 30712853
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| |||||| |||| |||| ||||||| ||||| ||| ||||||||||||||| |  |||||||||| |  | || ||||||||    
T  30713067 tgcgtttgatttgttaaaaaatgaaagacatgacaaaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggc 30712968  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgcca----aaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||  ||||||| | |||||| |||||||||||||| |||    ||||||| ||||||||||| ||| ||||| ||||| ||||||| || |||||| |||    
T  30712967 aagggacaggacacaaactgaaatttttgtccctcaccaaattaaccacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaatatcat 30712868  T
Q  208 ttcgtcacccaaaaat 223  Q
    ||| || |||||||||    
T  30712867 ttcatc-cccaaaaat 30712853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 10399750 - 10399962
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    ||||| |||||||||| |||| ||||||||||| || ||||||||||||||||| | |||||||||||||||||   ||||||| | | || ||||| ||    
T  10399750 gggtgtgtttgatttgctaaaaaatgaaggacatgatagaacaacttcagttgttcagtgtttgatttgtaaaactatttcaggtacaggacaaactaga 10399849  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     ||||   |||||| |||||||   |||||||||| || | |||||||| ||||||||||||||  | ||| ||||| |||||||  | |||||||||||    
T  10399850 tgcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaaatccaaaatagcatt 10399949  T
Q  209 tcgtcacccaaaa 221  Q
    | ||| |||||||    
T  10399950 ttgtcccccaaaa 10399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 41934734 - 41934577
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaact 165  Q
    |||| ||||||||||||  | || ||||||  ||||||||||| ||||| |||| || |||||||| |||| |||| | || | |||||||| |||||||    
T  41934734 gtgtgtgatttgtaaaactgattaagggatgagataaactggatgcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaact 41934635  T
Q  166 ttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||||| ||||| |||||||||| |||||| ||||| |||  ||||||||    
T  41934634 ttttgtcctacgtataagttgtctaaaataccaaaataacattttgtccaccaaaaat 41934577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 2086270 - 2086068
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||||| |||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  2086270 gtgcgtttgatttgctaaaaaatgaaggacaagacaga-caactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagg 2086172  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    ||         | |||||||   ||||||||||||  ||||||||||| ||||||||||||   ||||||||||| ||| |||||| |||||| |||||     
T  2086171 ca---------acaaaaactcatatttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacatttt 2086081  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  2086080 gtccctcaaaaat 2086068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 9717308 - 9717220
Alignment:
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||| ||| | |||||||    
T  9717308 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 9717220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 26419008 - 26418917
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaattg 225  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||  || |||||||||||    
T  26419008 atttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccaaaaattg 26418917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 9717413 - 9717328
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||  |||||| | |||||||||||||||||  ||||||||    
T  9717413 aagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcagg 9717328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 27462685 - 27462842
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||  ||||  ||||| ||||||| | ||||| ||||||||||| |||||||||||||||||  |||| ||| | |||| |||||| || |    
T  27462685 tgcgtttgattttttaaaagatgaaagacaggatataacaatttcagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactgtagac 27462784  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt 169  Q
    ||  |||| || |||| |||  ||||||||||||| |||||||||| |||||||||||    
T  27462785 aagggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaacttttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 37863245 - 37863349
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||| |||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  37863245 agggtgcgcttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 37863344  T
Q  108 aggca 112  Q
    |||||    
T  37863345 aggca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 4641702 - 4641526
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||| | ||||||||||||| |||||| | |||||||||||||||||  |||||||| | | || ||||||||||     ||| | | ||||| |    
T  4641702 aatgaaggaaaagacagaacaactttagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggtgg--gacggaacaaaaatt 4641605  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
       ||||||||| ||| |||||||||||||||||||||||||  || |||||||| | |||||||| ||||||||||||    
T  4641604 catatttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatagcattt 4641526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 12939275 - 12939394
Alignment:
Q  104 ctggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    ||||||||||  |||| || ||||||||  |||||||||| || |||||||||||||||||||||| ||  ||||||||||| ||||| |||| ||||||    
T  12939275 ctggaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaata 12939374  T
Q  204 gcatttcgtcacccaaaaat 223  Q
     ||||| ||| |||||||||    
T  12939375 acattttgtcccccaaaaat 12939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 37003769 - 37003843
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaa 81  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||  |||||||| ||||||||||||||||    
T  37003769 aagggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactcaagttgtccagtgtttgatttgtaaa 37003843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 37003873 - 37003962
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||| || |||||||||| |||||| ||||| ||| | |||||||    
T  37003873 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaat 37003962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 1247232 - 1247171
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata 195  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  1247232 atttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12939202 - 12939271
Alignment:
Q  13 gcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    |||||||||||  |||| ||||||||| | |||||||||||||||||||||| ||||||||||| |||||    
T  12939202 gcgtttgatttactaaaaaatgaaggataagacagaacaacttcagttgtccagtgtttgatttataaaa 12939271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 45463115 - 45463194
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
    ||||||||| ||| |||||||||| |||||||||||||| ||||||||  || |||||||||  |||||| |||||||||    
T  45463115 atttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaatatcaaaataacatttcgtc 45463194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 8112454 - 8112348
Alignment:
Q  65 ggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaac 164  Q
    ||||||||||||||||||| |||||||| | |  | |||||||||||||  ||||  | |||||||   ||||||||| ||| |||||||||| ||||||    
T  8112454 ggtgtttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaac 8112355  T
Q  165 tttttgt 171  Q
    |||||||    
T  8112354 tttttgt 8112348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 18793180 - 18793256
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    ||||||||| |||| ||||||||||| ||||||||||||  |||||  | |||||||||||||||||  ||||||||    
T  18793180 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgctcagtgtttgatttgtaaaactgtttcagg 18793256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 20907660 - 20907585
Alignment:
Q  148 ccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||| |||| ||||||||||| |||||| || | |||||||| |||||| |||||  || |||||||||    
T  20907660 ccaaaccacagaacaattttttgtcctatgtacaaattgtataaaatactaaaataacattttatcccccaaaaat 20907585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 26796381 - 26796251
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaact 165  Q
    |||||||||||||||||  ||| || ||| |  | |||||  ||||||  || |||||||||| |  ||||| |||||||| | ||| |||| | |||||    
T  26796381 gtgtttgatttgtaaaactgttacaaggacaaaacaaacttcaggcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaact 26796282  T
Q  166 ttttgtcctacgtacaagttttctaaaatac 196  Q
    |||||||  ||||||||||| ||||||||||    
T  26796281 ttttgtcacacgtacaagttgtctaaaatac 26796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 18279104 - 18278949
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    ||||||| || |||| ||| ||||||||||||  |||| || |||||| |  |||||||||| |||||| |||| ||||| | || ||||||||| ||||    
T  18279104 gtttgatctgctaaaaaattaaggacaggacatgacaattt-agttgtgcaatgtttgatttataaaat-gttttagggacaagacaaactggagacaaa 18279007  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtc 172  Q
     ||| | | |||||||  ||||||||| |||| | ||| |||  ||||||||||||||    
T  18279006 ggacggcacaaaaactaaaatttttgttcctcactaaatcacgtcacaactttttgtc 18278949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 26910293 - 26910505
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||||||||||||||||| | ||||||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||| | |  |||||||||    
T  26910293 ggtgcgtttgatttgatata-aatgaaggacatgacagaacaactacagttgtccagtgtttgatttgtaaaacagtttcagggacagggcaaactggag 26910391  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| || ||||||||||||||| | ||    
T  26910392 gcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttgtcaaaaatacaaaaatagtaatt 26910491  T
Q  210 cgtcacccaaaaat 223  Q
    ||||||||||||||    
T  26910492 cgtcacccaaaaat 26910505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 34519723 - 34519527
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| |||| || ||||    
T  34519723 agggtgcgtttgatttaataaaaaataaaggacaggacagaacaacttcagttgtccagtgttcgaattgtaaaacagtttcagggacatgacaagctgg 34519624  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  34519623 aggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatacaaaaatag 34519527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 22723912 - 22724127
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||||||||| |||||||||   |||||||||||| ||||||||| ||||||||||||||||| |||||||||||   || ||||| |    
T  22723912 agggtgcgtttgatttgataaaaaatgaaggatgtgacagaacaactccagttgtccagtgtttgatttgtaaaacagtttcagggaccggacaaactcg 22724011  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||| ||  ||||||| |||||||||||| ||||||| ||||||||||||| | ||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  22724012 aggtaagggacaggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatacaaaaatagcat 22724111  T
Q  208 ttcgtcacccaaaaat 223  Q
    ||||||||||||||||    
T  22724112 ttcgtcacccaaaaat 22724127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 26994106 - 26994306
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | |||| ||||||||    
T  26994106 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgga 26994205  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||| ||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  26994206 ggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 26994305  T
Q  209 t 209  Q
    |    
T  26994306 t 26994306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 47953408 - 47953190
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||    
T  47953408 ataagggtgcgtttgatttgctaaaaaatgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 47953309  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  |||| || |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  47953308 tggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 47953209  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| | |||||||    
T  47953208 cattttgtccctcaaaaat 47953190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 43368416 - 43368215
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| ||| || |||||||    
T  43368416 agggtccgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtataggacaaactgg 43368317  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||| ||| ||||||||  |||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  43368316 aggcaagagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcat 43368217  T
Q  208 tt 209  Q
    ||    
T  43368216 tt 43368215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 10932437 - 10932652
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||| | |||||||||||||||||  |||||||| | | || |||||||    
T  10932437 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 10932536  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||| ||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  10932537 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 10932636  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  10932637 tttgtccctcaaaaat 10932652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 18386739 - 18386525
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| |||||||||||||||||||||| |  |||||||| |||||||||||||||||  |||||||| | |||| |||||||    
T  18386739 agggtgtgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgg 18386640  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||| ||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  18386639 aggcaagggacaggacaaaa-ctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 18386541  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  18386540 tttgtccctcaaaaat 18386525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 21785082 - 21784871
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| | |||||||||||||||||  |||||||| | |||| |||||||||||    
T  21785082 tgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggc 21784983  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  21784982 aagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttg 21784883  T
Q  212 tcacccaaaaat 223  Q
    ||  ||||||||    
T  21784882 tcctccaaaaat 21784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 41211080 - 41211281
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||  |||||||| | | || ||||| |    
T  41211080 agggtacgtttgatttgctaaaaaatgaaggacaggacagaacaactcaagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactag 41211179  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  41211180 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 41211279  T
Q  208 tt 209  Q
    ||    
T  41211280 tt 41211281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 26371689 - 26371904
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||  |||||||| |||||||||||| ||||   ||||||| | | || |||||||    
T  26371689 agggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactgg 26371788  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  26371789 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcat 26371888  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  26371889 tttgtccctcaaaaat 26371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 36769449 - 36769664
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| |||||||||||| | |||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  36769449 agggtgtgtttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactag 36769548  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  36769549 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 36769648  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  36769649 tttgtctctcaaaaat 36769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 44748906 - 44748695
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||| |||||||||||| |||||||  |||||||| |||||||||||||||||  |||||||| | |||| ||||| |||||    
T  44748906 tgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggc 44748807  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||| | |||||||  |||||||||||||| ||||||||||  |||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  44748806 aagggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttg 44748707  T
Q  212 tcacccaaaaat 223  Q
    || |||||||||    
T  44748706 tcccccaaaaat 44748695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 9913741 - 9913525
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||| | | ||||||||    
T  9913741 taagggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaact 9913642  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
     |||||||  ||||||| ||||| || |  ||||||| ||| |||||||||| ||||||||||| ||| ||||||| ||| |||||||||| |||||| |    
T  9913641 agaggcaagggacaggacaaaaattg-atattttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataac 9913543  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  9913542 atttcgtcccccaaaaat 9913525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 9927429 - 9927213
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||| | | ||||||||    
T  9927429 taagggtgcatttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaact 9927330  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
     |||||||  ||||||| ||||| || |  ||||||| ||| |||||||||| ||||||||||| ||| ||||||| ||| |||||||||| |||||| |    
T  9927329 agaggcaagggacaggacaaaaattg-atattttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataac 9927231  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  9927230 atttcgtcccccaaaaat 9927213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 3922586 - 3922798
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||  |||||||| | | || ||||||||||    
T  3922586 gtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggagg 3922685  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  |||| || |||||||   |||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  3922686 caagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatagcatttt 3922785  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  3922786 gtccctcaaaaat 3922798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 22724438 - 22724626
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    ||||| |||||||||||| | ||||||| | | ||||||||||||||| ||||||||||| | || |||||||||||||  || | || |||| ||||||    
T  22724438 aaggataggacagaacaattccagttgttcagcgtttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaa 22724537  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||| |||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22724538 tttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcgcccaaaaat 22724626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 11321769 - 11321980
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||| ||| ||||||||||||  ||||||||  ||||||||||||||||  | |||||| | | || |||||||||||    
T  11321769 tgcgtttgatttgctaaaaaatgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggc 11321868  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  11321869 aacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttg 11321968  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  11321969 tccctcaaaaat 11321980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 43158566 - 43158781
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  43158566 agggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 43158665  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||  |||||||||| ||||||||||||||| ||||||||||| ||||||| |  ||||||||||    
T  43158666 aggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcat 43158765  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  43158766 tttgtccctcaaaaat 43158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 38301560 - 38301343
Alignment:
Q  6 taagggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    ||||||||||||||||||| |||| || |||||||||||||||||||||| || |||||| |||||||||||||||||  |||||||| | | || ||||    
T  38301560 taagggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 38301461  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  ||||||| ||||||||  |||||||||||||  ||||||||| ||||||||||||||| ||| ||||||| |||||||||  ||||||     
T  38301460 tggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaatatcaaaataa 38301362  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| |||||||||    
T  38301361 cattttgtcccccaaaaat 38301343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 40753372 - 40753155
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||| | ||||| ||||||||||||   |||||||  ||||||||||||||||  |||||||| | | || |||||    
T  40753372 taagggtgcgtttgatttgctaaaaaataagggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaact 40753273  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  40753272 ggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 40753173  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  40753172 attttgtccctcaaaaat 40753155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 1363850 - 1363635
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||| ||||||||| |||| ||| ||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||| | | | || ||||||||    
T  1363850 gggtgcctttgatttgctaaaaaataaaggataggacaaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactgga 1363751  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || |||| |||  |||||||||||||  ||||||||| ||||||||||||||  ||||||| ||| || |||||||||||||||||||    
T  1363750 ggcaagggacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatagcatt 1363651  T
Q  209 tcgtcacccaaaaattg 225  Q
    |||| ||||||||||||    
T  1363650 tcgt-acccaaaaattg 1363635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 329687 - 329470
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttca------gttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||| ||      ||||||| |||||||||||||||||  |||||||||| |  | |||||    
T  329687 tgcgtttgatttgttaaaaaatgaaggacaagacaaaacaactccaactccagttgtcccgtgtttgatttgtaaaactgtttcagggacagaacaaact 329588  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||| |||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||  |||||| || ||||||||    
T  329587 ggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagc 329488  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| |||||||||    
T  329487 attttgtcccccaaaaat 329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 29661536 - 29661323
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| || | |||||||||  |||||||| |||||||||||||| ||  | |||||| | |||| ||||||||    
T  29661536 gggtgcgtttgatttgctaaaaaatgaaggatag-atagaacaactctagttgtccagtgtttgatttgtagaactgattcaggtacatgacaaactgga 29661438  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||    
T  29661437 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagttatctaaaataccaaaatagcatt 29661338  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  29661337 ttgtcccacaaaaat 29661323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 1870350 - 1870149
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||||||| |||| ||||||||||||  ||||||||||  |||||| | |||||||||||||||||  |||||||| | | ||||||||||    
T  1870350 agggtgcatttgatttgctaaaaaatgaaggacagtgcagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactgg 1870251  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||| |||    
T  1870250 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacat 1870151  T
Q  208 tt 209  Q
    ||    
T  1870150 tt 1870149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 47316579 - 47316793
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| | ||||||| ||||  |||||||| |||||||||||||||||| |||||||| | | || ||||||||    
T  47316579 gggtgcgtttgatttgctaaaaaatgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactgga 47316678  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  || | |||||| |||||| ||| |||||||||||    
T  47316679 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtctaaattaccaaaatagcatt 47316778  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  47316779 ttgtccctcaaaaat 47316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 46633909 - 46633697
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||  | | || |||||    
T  46633909 taagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaact 46633810  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||| | | ||||     ||||||   |||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  46633809 ggaggaacaagaca-----aaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 46633715  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  46633714 attttgtccctcaaaaat 46633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 34295292 - 34295499
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||| | |||| ||| || || |||||||||||||| ||||| ||| |||||||||||||||||  |||||||| | |||| ||||||||    
T  34295292 gggtgcgtttgattagctaaaaaataaaagataggacagaacaactccagttatccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgga 34295391  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||       || ||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  34295392 ggcaa-------gacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 34295484  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  34295485 ttgtcccccaaaaat 34295499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 41665564 - 41665671
Alignment:
Q  117 acaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacc 216  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  41665564 acaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatagcatttcgtcacc 41665663  T
Q  217 caaaaatt 224  Q
    ||||||||    
T  41665664 caaaaatt 41665671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 48894930 - 48894717
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||| | |  | ||||||||     
T  48894930 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcaggtacagtacaaactggat 48894831  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   |||||||||  || | |||||||| ||||||||||||||| |||||||| |  |||||||  | |||||| |||||    
T  48894830 gcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaaatcatctaaaaatccaaaataacattt 48894731  T
Q  210 cgtcacccaaaaat 223  Q
     ||| |||||||||    
T  48894730 tgtcccccaaaaat 48894717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 18470888 - 18470684
Alignment:
Q  17 ttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatg 116  Q
    |||||||| || | |||||||||||||| |||||||||  |||||||  |||||||||||||||||  |||||||| | | || |||||||||||||  |    
T  18470888 ttgatttgctacaaaatgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa--g 18470791  T
Q  117 acaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacc 216  Q
    |||||| |||||||   ||||||||| ||| ||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||| ||||| ||| |     
T  18470790 acaggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccct 18470691  T
Q  217 caaaaat 223  Q
    |||||||    
T  18470690 caaaaat 18470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 43213806 - 43214009
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||  |||||||||||||||||  ||||   | | | || |||||| |    
T  43213806 gggtacgtttgatttgctaaaaaatgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttttcagtacaggacaaactgaa 43213905  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| ||||||| |||  |||||||||| || |||||||||| ||||||||||||||| || |||||||| || ||||||| |||||||||||    
T  43213906 ggcaagggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaataccaaaatagcatt 43214005  T
Q  209 tcgt 212  Q
    ||||    
T  43214006 tcgt 43214009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 11250832 - 11250667
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||| ||||||||||| |||||||| | | || |||||||    
T  11250832 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaaattgtttcaggtacaggacaaactgg 11250733  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcc 173  Q
    ||||||  ||||||| ||||| |   ||||||||||||| |||||||||| |||||||||||||||    
T  11250732 aggcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgtcc 11250667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 20127500 - 20127289
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||  |||||| || |||||||||||||| ||||||||| ||||||||||| |||||   ||||||| | | || |||||||||||    
T  20127500 tgcgtttgatttgctaataaatgaaagataggacagaacaactccagttgtccagtgtttgatttttaaaactatttcaggtacaggacaaactggaggc 20127401  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||| |||  |||||||| ||||  ||||||||| ||||||||||||||| |||||||| || | |||||||| |||||  |||||||    
T  20127400 aagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaataccaaaatgacatttcg 20127301  T
Q  212 tcacccaaaaat 223  Q
    || |||||||||    
T  20127300 tcccccaaaaat 20127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 32873654 - 32873864
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||| |||||||||| |||| |||||||||||||||| |||   |  ||||||||  ||||||||||||||||| |||||||| |   ||||||||||||    
T  32873654 ggtgtgtttgatttgctaaaaaatgaaggacaggacaaaac---tctagttgtccattgtttgatttgtaaaattgtttcaggtaccggataaactggag 32873750  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   |||||||||| || |||||||||| ||||||||||||||  ||||||||||| ||| |||||| ||||||||||||    
T  32873751 gcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattt 32873850  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  32873851 tgtccctcaaaaat 32873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 30849127 - 30849341
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| |||||||||| |  ||||||||  || |||||||||||||  |||| ||| | | || |||||||     
T  30849127 gggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaaactgttttaggtacaggacaaactggt 30849226  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| |  |||||||| | |||||||| |||||| ||||    
T  30849227 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaataacatt 30849326  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  30849327 ttgtcccccaaaaat 30849341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 16963353 - 16963176
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  | |||||| |||||||||||||||||  |||||||| | |||| ||||| |    
T  16963353 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactag 16963254  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagtt 185  Q
    ||||||  || |||| |||||||   ||||||||||||   |||||||||  |||||||||||||| |||||||||||    
T  16963253 aggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaactttttgtcccacgtacaagtt 16963176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 43189124 - 43189336
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||| |||||| |||| |||||||  |||||||| ||||||||||| |||||  |||||||| | | || |||||||||    
T  43189124 ggtgcgtttgatttgctaaaaaatggaggacatgacaaaacaactctagttgtccagtgtttgatttataaaaatgtttcaggtacaggacaaactggag 43189223  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    | ||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||| ||||| ||||||| ||||    
T  43189224 gtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaataccaaaatagtattt 43189323  T
Q  210 cgtcacccaaaaa 222  Q
     ||| ||| ||||    
T  43189324 tgtccccccaaaa 43189336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 17237291 - 17237076
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  ||||||| | |  | |||||||    
T  17237291 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacagtacaaactgg 17237192  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    | ||||   ||| || |||||||   |||||||||  || | |||||||| ||||||||||||||  |||||||| || |||||||  | |||||| |||    
T  17237191 atgcaaggaacatgacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaaatccaaaataacat 17237092  T
Q  208 ttcgtcacccaaaaat 223  Q
    |||||| |||||||||    
T  17237091 ttcgtcccccaaaaat 17237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 48445736 - 48445521
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||| ||||| |||| ||||||||| | |||||||||||| ||||| |||  ||||| ||||||||||  |||| ||||| |  | |||||||    
T  48445736 agggtgcgtttaatttgttaaaaaatgaaggaaaagacagaacaactccagttatccaatgtttaatttgtaaaactgtttgagggacagaacaaactgg 48445637  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||||   | |||||||| ||||||| || |||||| |||    
T  48445636 aggcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataacat 48445537  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  48445536 tttgtcccccaaaaat 48445521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 23349209 - 23349382
Alignment:
Q  46 agaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccct 145  Q
    ||||| ||| ||||||||| |||||||| ||||||||   ||||| | | |||| |||||||||||||  ||||| | ||||||||  ||||||||||||    
T  23349209 agaactactccagttgtccagtgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccct 23349308  T
Q  146 cgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaa 219  Q
    | |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||  ||||||||| |||||    
T  23349309 caccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaatgacatttcgtcccccaa 23349382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 46448522 - 46448739
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| |||  | |||| || ||||||||||||||||||  |||||||||||||||||| |||||||| |    | |||||    
T  46448522 taagggtgcgtttgatttgttaaaaaatagaagacaagatagaacaacttcagttgtctagtgtttgatttgtaaaattgtttcaggtacggtacaaact 46448621  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||| ||||  |||| ||||||||||   |||||||||| || | |||||||||||||||||||||||| | ||| || || |||||||  | |||||| |    
T  46448622 ggatgcaagggacatgataaaaactcatatttttgtccgtcactaaaccacagcacaactttttgtcccatgtataaattatctaaaaatccaaaataac 46448721  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| || ||||||    
T  46448722 atttcgtcccctaaaaat 46448739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 37967182 - 37966984
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||||| |||| |||||||| |||| |||||||||||||||||||||  |||||||| | |||| ||| |||| ||||     
T  37967182 gtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaag 37967083  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
     |||| || ||||||    |||||||||  || | | |||||| ||||||||||||| | ||||||||||| |||||||  | ||||||||||||||||    
T  37967082 ggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagttatctaaaaatccaaaatagcatttcgtc 37966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 3891919 - 3892107
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||||||  ||||||||| |||| ||||||||||||||||||||||||  ||||||||  ||||||||||||||                 || ||||    
T  3891919 ataagggtgtatttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaag----------------gacaaac 3892002  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  ||||||| |||||||   ||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  3892003 tggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaataccaaaatag 3892102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 11822438 - 11822268
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||||||||| |||||| |||||||||| ||||||  |||| ||| | | || |||||||    
T  11822438 agggtgcgtttgatttactaaaaaataaaggacaggacagaacaacttcacttgtccagtgtttgattcgtaaaactgtttgaggtacaggacaaactgg 11822339  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgt 178  Q
    | ||||  |||| || |||||||   |||||||||| || | |||||||| ||||||||||||||| ||||    
T  11822338 atgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtcccacgt 11822268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 26652965 - 26652866
Alignment:
Q  124 aaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||| |||  ||||||||    
T  26652965 aaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaat 26652866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 26700689 - 26700587
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||| ||||| | ||||||||| |||||||||||||| ||  |||||||| | |||| ||||||||||    
T  26700689 gtgcgtttgatttggtaaaaaatgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggagg 26700590  T
Q  111 caa 113  Q
    |||    
T  26700589 caa 26700587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 34117554 - 34117452
Alignment:
Q  121 gataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaa 220  Q
    ||||||||||   ||||||||||||| |||||||||| ||||| ||||||| | | ||||||||| |||||||| | |||||||||||||||| ||||||    
T  34117554 gataaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaa 34117455  T
Q  221 aat 223  Q
    |||    
T  34117454 aat 34117452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 46408978 - 46408905
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||  ||||||||||    
T  46408978 atttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtctaaaatatcaaaatagcat 46408905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 30598947 - 30599103
Alignment:
Q  67 tgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactt 166  Q
    ||||| ||||||||||  |||||||| | | || |||||||||||||  ||||||| |||| ||   |||||||||||||  ||||||||| ||||||||    
T  30598947 tgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactt 30599046  T
Q  167 tttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||  | |||||| || |||||||||| |||||| ||||| ||| || ||||||    
T  30599047 tttgtctcaagtacaaattatctaaaataccaaaataacattttgtcccctaaaaat 30599103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 223
Target Start/End: Complemental strand, 21133528 - 21133372
Alignment:
Q  67 tgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactt 166  Q
    ||||| ||||||||||  |||||| | | | || |||||| ||||||  |||| || ||||||||  ||| || ||||||   |||||||| ||||||||    
T  21133528 tgtttaatttgtaaaactgtttcaagtacaggacaaactgaaggcaagggacaagacaaaaactgatattattttccctcaataaaccacatcacaactt 21133429  T
Q  167 tttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||  || ||||| || |||||||||| |||||||||||||||| |||||||||    
T  21133428 tttgtctcacatacaaattgtctaaaataccaaaatagcatttcgtctcccaaaaat 21133372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 46627259 - 46627168
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaattg 225  Q
    |||||| ||||||  ||||||||||||||| ||||||||  ||||||   || |||||||||||||||||| |||||||| |||||||||||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtacggattgtctaaaatacaaaaatagtatttcgtctcccaaaaattg 46627168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 47947826 - 47947760
Alignment:
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  47947826 agcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 47947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 22631827 - 22631738
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||| || |||||||||| || ||||||||||  |||||||||||| |||||||||| |||||   |||||||| |||||||||    
T  22631827 atttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaaaat 22631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 41665476 - 41665541
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgttt 71  Q
    |||||||| ||||||||||||||| ||| ||||| |||||||||||||| ||||||||| ||||||    
T  41665476 taagggtgtgtttgatttgataaataataaaggataggacagaacaactccagttgtccagtgttt 41665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 42332214 - 42332073
Alignment:
Q  68 gtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttt 167  Q
    |||||| || ||||||||||| || |||| |||||| |||||||||||||||||| ||||||   |||| | || | || |||||||||| |||||||||    
T  42332214 gtttgagttataaaatagttttagagataggataaattggaggcaaatgacaggacaaaaacataaattctagttcttcaccaaaccacatcacaacttt 42332115  T
Q  168 ttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||||  || ||||| || ||| |||||  |||||| |||||    
T  42332114 ttgtctcacatacaaattgtcttaaatatcaaaataacattt 42332073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 48699497 - 48699417
Alignment:
Q  124 aaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||| |||| ||||||||| | |||||||| ||||||| ||||| | ||||||||||| |||||||||| |||||||    
T  48699497 aaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatag 48699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Original strand, 15035226 - 15035334
Alignment:
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    |||||||| ||||| |||||||  |||| || |||| |||| |||| ||| |||||| ||||||||||||| | || ||||| || |||||||||  |||    
T  15035226 aaactggaagcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgtaccacatacaaattgtctaaaatatcaaa 15035325  T
Q  201 atagcattt 209  Q
    ||| |||||    
T  15035326 ataacattt 15035334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 35645530 - 35645466
Alignment:
Q  140 gtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||| | |||||||| ||||||||||| || |||||||||||| |||||||||  |||||||    
T  35645530 gtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatag 35645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 196
Target Start/End: Complemental strand, 8360726 - 8360580
Alignment:
Q  49 acaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgc 148  Q
    |||||||||||||| |  ||||| | ||||||||  |||||| | |||||| ||| || ||  ||| |||| || ||||| |  |||| ||||| | | |    
T  8360726 acaacttcagttgtacaatgtttaaattgtaaaacggtttcaagcatatgaaaaagtgaagataaaggacatgacaaaaaataaaattcttgtctcacac 8360627  T
Q  149 caaaccacagcacaactttttgtcctacgtacaagttttctaaaatac 196  Q
     |||||||| |||||||||||||||| |||||||||| ||||||||||    
T  8360626 taaaccacatcacaactttttgtcct-cgtacaagttgtctaaaatac 8360580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 22484616 - 22484832
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||| ||||||||||||| ||||||||||| |||| |||||||    
T  22484616 agggtgcgtttgatttgataaaaaatgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaaacagtttcagggacatgacaaactgg 22484715  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||| || |||||||||| ||| ||||||| ||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  22484716 aggcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaactttttgtcccacgtataagttgtctaaaatacaaaaatagcat 22484815  T
Q  208 ttcgtcacccaaaaatt 224  Q
    |||||||||||||||||    
T  22484816 ttcgtcacccaaaaatt 22484832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 3964496 - 3964286
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||||| ||| |||| ||| |||||||    
T  3964496 tgcgtttgatttgataaaaaatgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggc 3964397  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||   || ||| |||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||    
T  3964396 aaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcatttcg 3964297  T
Q  212 tcacccaaaaat 223  Q
    || |||||||||    
T  3964296 tc-cccaaaaat 3964286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 3867523 - 3867737
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||||| |  | | ||||||    
T  3867523 gggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcagggacagaacatactgga 3867622  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    | |||  |||| || |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3867623 gacaagagacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcatt 3867722  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  3867723 ttgtcccccaaaaat 3867737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 19906970 - 19906769
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    |||| |||||||| |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||| |  | |||||||||||    
T  19906970 tgcgattgatttgttaaaaaatgaaggacaggataaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggc 19906871  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||| || ||||||||||||||    
T  19906870 aagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaacaccaaaatagcatttcg 19906771  T
Q  212 tc 213  Q
    ||    
T  19906770 tc 19906769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 3864550 - 3864762
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||| ||||| |||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||  |||||||| | | || |||||||    
T  3864550 agggtgcgtttcatttgctaaaaaatga--gacaggacagaacaactttagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactgg 3864647  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||| ||||||| |||||||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  3864648 aggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 3864747  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  3864748 tttgtc-cccaaaaat 3864762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 51925080 - 51925296
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    |||||||||||||||||| || | ||||||||| |||||||||||||| ||||||||| |||||| ||||||||||  |||||||| | |||| ||||||    
T  51925080 aagggtgcgtttgatttgctagaaaatgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaaactg 51925179  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||| ||||||| ||||||||  ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| | |  ||||| |||||| ||    
T  51925180 gaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttttaataccaaaataaca 51925279  T
Q  207 tttcgtcacccaaaaat 223  Q
    ||||||| |||||||||    
T  51925280 tttcgtcccccaaaaat 51925296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 31882895 - 31883110
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  31882895 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 31882994  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || ||||||||  |||||||| ||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||    
T  31882995 aggcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcat 31883094  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  31883095 tttgtcccccaaaaat 31883110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 12349045 - 12349259
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  12349045 gggtgcgtttgatttgctaaaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 12349144  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||| ||| |||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  12349145 ggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttgtctaaaataccaaaatagcatt 12349244  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  12349245 ttgtccctcaaaaat 12349259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 29585084 - 29584886
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  29585084 gtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 29584985  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||| |||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  29584984 caagtgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 29584886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 33364649 - 33364866
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||||  |||||||| | | || |||||    
T  33364649 taagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaact 33364748  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| ||||||||  ||||||| |||||  ||||||||| ||||||||||||||  ||||||||||| |||||||||  ||||||||    
T  33364749 ggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatagc 33364848  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| |||||||||    
T  33364849 attttgtcccccaaaaat 33364866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 24571486 - 24571278
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| |||||||||||||||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||     
T  24571486 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 24571387  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||| |||     
T  24571386 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaataggattttgtcc 24571287  T
Q  215 cccaaaaat 223  Q
    |||||||||    
T  24571286 cccaaaaat 24571278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 44117148 - 44116936
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||| |||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  44117148 gtgcgtttgatttgctaaaaaatgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggagg 44117049  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   |||||||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||     
T  44117048 caagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcatttt 44116949  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  44116948 gtccctcaaaaat 44116936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 50386330 - 50386546
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||  |||||||| | | || ||||||||    
T  50386330 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 50386429  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || ||||| ||  |||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  50386430 ggcaagagacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcatt 50386529  T
Q  209 tcgtcacccaaaaattg 225  Q
    | ||  |||||||||||    
T  50386530 ttgttccccaaaaattg 50386546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 28676004 - 28675787
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||| |  |||||||| |||||||||||||||||  |||||||| | | || |||||    
T  28676004 taagggtgcgtttgatttgttaaaaaatgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 28675905  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  || |||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  28675904 ggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 28675805  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  28675804 attttgtccctcaaaaat 28675787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 2135282 - 2135067
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  2135282 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactag 2135183  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||| | |||||||   ||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||     
T  2135182 aggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatagcac 2135083  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  2135082 tttgtccctcaaaaat 2135067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 42636276 - 42636491
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |  |||||||| |||||||||||||||||  |||| ||| ||| || |||||||    
T  42636276 agggtgcatttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactgg 42636375  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||| | |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    
T  42636376 aggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacat 42636475  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  42636476 tttgtccctcaaaaat 42636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 51259655 - 51259854
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  51259655 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 51259754  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  51259755 gcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattt 51259854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 38213572 - 38213351
Alignment:
Q  2 accataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgata 101  Q
    |||||| |||||||||| ||||| |||| |||||| ||||||| |||||||||  |||||||| |||||||||||||||||| |||||||| ||| || |    
T  38213572 accatacgggtgcgttttatttgctaaaaaatgaaagacaggatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtataggaca 38213473  T
Q  102 aactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaa 201  Q
    | ||||||||||  ||||||| |||||||   ||||||||| ||| | |||||||| ||||||||||||||| ||||||||||| |||||||||| ||||    
T  38213472 atctggaggcaagagacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaa 38213373  T
Q  202 tagcatttcgtcacccaaaaat 223  Q
    || ||||| ||| |||||||||    
T  38213372 taccattttgtcccccaaaaat 38213351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 40094717 - 40094500
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | |  | |||||    
T  40094717 taagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaact 40094618  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   ||||||||||||| |||||||||| |||||||||||||   |||||||| || |||||||||| ||||||||    
T  40094617 ggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagc 40094518  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  40094517 attttgtccctcaaaaat 40094500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 1344587 - 1344795
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||   ||||||| | | || |||||||||||||     
T  1344587 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaag 1344686  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| | |||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||| |||     
T  1344687 ggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtcc 1344786  T
Q  215 cccaaaaat 223  Q
    | |||||||    
T  1344787 ctcaaaaat 1344795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 47958308 - 47958520
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| || || |||||| | |||||||||  |||||||| |||||||||||||||||| |||||||| | | || ||||||||||    
T  47958308 gtgcgtttgatttgctaaaaaacgatggacagtatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggaaaaactggagg 47958407  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  47958408 caagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 47958507  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  47958508 gtccctcaaaaat 47958520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 20609544 - 20609736
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||||||||||||||||||  ||||||||  ||||||||||||||||  |||||||| | | || ||||||| |||||  ||||||| |||||||    
T  20609544 aatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaact 20609643  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
       ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  20609644 catatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 20609736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 20255255 - 20255042
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  20255255 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 20255156  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||   |||||| |||||||   ||||||||||||| ||||||||||||||||||| |||||| || |||||||| |||||||||| |||||| ||||    
T  20255155 ggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacatt 20255057  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  20255056 ttgtccctcaaaaat 20255042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 39052708 - 39052926
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||| ||||||||||||| |||| |||||| |||| |||| |||||||  |||||||  |||||||||||||||||  |||||||| | | || ||||    
T  39052708 ataaggatgcgtttgatttgctaaaaaatgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttcaggcacaggacaaac 39052807  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  ||||||| |||||||   ||||||||| ||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||     
T  39052808 tggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataa 39052907  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| |||||||||    
T  39052908 cattttgtcccccaaaaat 39052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 49748785 - 49748999
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| || | ||||||||| |||| |||||||||  ||||||   |||||||||||||||||  |||||||| | | || ||||||||    
T  49748785 gggtgcgtttgatttgctagaaaatgaaggataggatagaacaactcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 49748884  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||| |||| || ||||||||  ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| | | |||||| |||||| ||||    
T  49748885 ggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaataccaaaataacatt 49748984  T
Q  209 tcgtcacccaaaaat 223  Q
    ||||| |||||||||    
T  49748985 tcgtcccccaaaaat 49748999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 21221235 - 21221450
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||  ||||||||  | ||||||||||||||  |||||||| | | || || |||||    
T  21221235 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaa-ctgga 21221333  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||||||    
T  21221334 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcatt 21221433  T
Q  209 tcgtcacccaaaaattg 225  Q
    | ||| | |||||||||    
T  21221434 ttgtccctcaaaaattg 21221450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 34026867 - 34026664
Alignment:
Q  20 atttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgaca 119  Q
    ||||| |||| ||||||||||||||||||||||||  | |||| | |||||||||||||||||  |||||||| ||| || |||||||||||||  ||||    
T  34026867 atttgctaaaaaatgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggaca 34026768  T
Q  120 ggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaa 219  Q
     || |||||||   ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||    
T  34026767 tgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 34026668  T
Q  220 aaat 223  Q
    ||||    
T  34026667 aaat 34026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 6179638 - 6179429
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||| ||||| |||||||||||||| | ||||||| ||||||||| ||||||||||||||||| ||||||||  | | |  |||||||    
T  6179638 agggtgcgtttgattttataaaaaatgaaggacaggataaaacaactccagttgtccagtgtttgatttgtaaaacagtttcagaaacaggtcaaactgg 6179539  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgt-ccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    ||| ||  ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||  |||       | ||||||||||||||||| ||    
T  6179538 aggtaagggacaggacaaaaactgtaatttttgtcccctcgccaaaccacagcacaactttttgtcacacg-------tgtctaaaatacaaaaataaca 6179446  T
Q  207 tttcgtcacccaaaaat 223  Q
    |||||||||| ||||||    
T  6179445 tttcgtcaccaaaaaat 6179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 51296789 - 51296578
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||| ||| |||| |||||||||||  | |||||| |||||| ||||||||||  |||||||| | | || |||||||||    
T  51296789 ggtgcgtttgatttgctaaa-aataaag-acagaacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggag 51296692  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||| ||||||| |||||||   ||||||||||||| |||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  51296691 gcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaatacaaaaatagcattt 51296592  T
Q  210 cgtcacccaaaaat 223  Q
     ||| || ||||||    
T  51296591 tgtccccaaaaaat 51296578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 21374143 - 21373927
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    ||||||| ||||| |||| |||| ||||||| | | |||| ||||||||||||||||  |||||||||||||||||  |||||||| | | || |||||     
T  21374143 aagggtgtgtttggtttgctaaaaaatgaagaaaatgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactt 21374044  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||  ||||||| |||| ||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  21374043 gaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 21373944  T
Q  207 tttcgtcacccaaaaat 223  Q
    |||| ||  ||||||||    
T  21373943 tttcttcggccaaaaat 21373927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 45690779 - 45690989
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| || | | |||||||||||| ||||||||||||||||||| |||||||||||| ||||  |||||||| | | |||||| |||    
T  45690779 agggtgcgtttgatttgctataaagtgaaggacaggatagaacaacttcagttgtccagtgtttgatttgcaaaactgtttcaggtacaggataaattgg 45690878  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||| ||||||| ||||||||  |||||| ||||||     |||||||||||||||||||||  ||| | ||||| |||||||||| ||||| ||||    
T  45690879 aggcaaaggacaggacaaaaactgatatttttctccctc-----accacagcacaactttttgtctcacgcataagttgtctaaaataccaaaatcgcat 45690973  T
Q  208 ttcgtcacccaaaaat 223  Q
    ||||||  ||||||||    
T  45690974 ttcgtcctccaaaaat 45690989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 54622678 - 54622884
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||||| |  ||| |||||  | ||||      
T  54622678 tttgatttgctaaaaaatgaaggacatgacaaaacaacttcagttgtccggtatttgatttgtaaaactgtttcaggtac-tgacaaactaaatgcaagg 54622776  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
    ||||||| |||||||   ||||||||| ||| | |||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||| |    
T  54622777 gacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcatttcgtccc 54622876  T
Q  216 ccaaaaat 223  Q
    ||||||||    
T  54622877 ccaaaaat 54622884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 29646277 - 29646063
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||| ||||||||  |||| ||||||||||| |||| ||||| | ||||||| | |||||||||||||||||  |||| ||| | | |||||||||||    
T  29646277 gggtgcatttgattttctaaaaaatgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgttttaggtacacgataaactgga 29646178  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  || |||| ||||||    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| | |||||||| |||||||||||    
T  29646177 ggcaagggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatagcatt 29646078  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  29646077 ttgtcccccaaaaat 29646063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 50679009 - 50678808
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||| ||| |||| ||||| |  |||||||| |||||||||||| ||||  |||||||| | | || ||||||||    
T  50679009 gggtgcgtttgatttgctaaaaaatgaagtacaagacataacaattcaagttgtccagtgtttgatttgaaaaactgtttcaggtacaggacaaactgga 50678910  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    ||||||  |||||| ||||||||  ||||||||| ||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||| |||    
T  50678909 ggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtatt 50678810  T
Q  209 tc 210  Q
    ||    
T  50678809 tc 50678808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 24721695 - 24721495
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||  |||||| | |||||||||||||||||  |||||||||| |  | |||||||||    
T  24721695 ggtgcgtttaatttgttaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcagggacagaacaaactggag 24721596  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    | ||| ||||||| |||||||  |||||| || ||||  ||||||||| ||||||||||| ||| || |||||||| ||||||| || ||||||||||||    
T  24721595 gtaaaggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaacaccaaaatagcattt 24721496  T
Q  210 c 210  Q
    |    
T  24721495 c 24721495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 25927201 - 25927401
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||  |||||||   ||||||||||||||||  ||||||   | | || ||||||||    
T  25927201 gggtgcgtttgatttgctaaaaaatgatggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaaatacaggacaaactgga 25927300  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||  ||||| |||| ||||||||||||||| ||||||||||| |||||||||| |||||| ||||    
T  25927301 ggcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatt 25927400  T
Q  209 t 209  Q
    |    
T  25927401 t 25927401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 25860312 - 25860495
Alignment:
Q  26 taaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataa 125  Q
    |||| ||||||||||  ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||  |||| || ||    
T  25860312 taaaaaatgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaa 25860411  T
Q  126 aaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||||   ||||||||||||| |||||||||| ||||||||||||||  ||||||||||| ||||||||||  |||||||||||    
T  25860412 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatagcattt 25860495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 44267941 - 44267739
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||| |||||||||| ||||||||||| ||  |||||||||||||||| || |||||||||||||||| ||||| ||| |||||| |||||| ||| ||     
T  44267941 gttttatttgataaaaaatgaaggacatgatcgaacaacttcagttgttcgatgtttgatttgtaaaacagttttagg-atatgacaaactgtaggtaag 44267843  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     |||| || |||||     ||  |||||||||||||||||||| || |||||||| ||| || ||||| || ||||||||||||||||||||||||||||    
T  44267842 ggacatgacaaaaa-----ataattgtccctcgccaaaccacaacataactttttatcccacatacaaattgtctaaaatacaaaaatagcatttcgtca 44267748  T
Q  215 cccaaaaat 223  Q
     ||||||||    
T  44267747 tccaaaaat 44267739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 53557666 - 53557869
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||| ||||||||| |||| ||| ||||| | |||||| |||||  |||||| |  ||||||||||||||||  |||| ||| | | || |||||    
T  53557666 taagggtgcatttgatttgctaaaaaataaaggatatgacagagcaactctagttgttcaatgtttgatttgtaaaactgttttaggtacaggacaaact 53557765  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   | ||||||||||| ||||||||| |||||||||||||||  ||||||||||| |||||||||| ||||||||    
T  53557766 ggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagc 53557865  T
Q  206 attt 209  Q
    ||||    
T  53557866 attt 53557869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 4851338 - 4851544
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||||     |||||||  |||||||| |||||||||||||||||  |||| ||| | | || ||  |||||    
T  4851338 ggtgcgtttgatttgttaaaaaatgaaggacag-----aacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaagacaatttggag 4851432  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||| |||||||   ||||||||||||| |||| ||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  4851433 gcaagggacaggacaaaaactc--atttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 4851530  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  4851531 tgtccctcaaaaat 4851544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 41682927 - 41683075
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  41682927 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 41683026  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccaca 157  Q
    |||||  |||| || ||||||||  | |||||||||||  |||||||||    
T  41683027 ggcaagagacaagacaaaaactgatacttttgtccctcagcaaaccaca 41683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 5442491 - 5442302
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| ||||||||||||||||   |||||||| | | || |||||||    
T  5442491 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaagacaaactgg 5442392  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||||            | |||||||||||| ||||| |||||||||||||||||||| ||||||||| | |||||||||  ||||||||||    
T  5442391 aggcaagggacag------------agtttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcat 5442304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 3695181 - 3695382
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||  |||||||| |||||||||||||||||  |||| ||| | |||| ||||||||    
T  3695181 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactgga 3695280  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||               ||| |||||||||| |||||| |||||||| ||||||||||| |||||||||| ||||||| |||    
T  3695281 ggcaagggacaggacaaaaa---------------ctcaccaaaccacatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtatt 3695365  T
Q  209 tcgtcacccaaaaattg 225  Q
    |  || |||||||||||    
T  3695366 ttatcccccaaaaattg 3695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 44000462 - 44000277
Alignment:
Q  18 tgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatga 117  Q
    ||||||| |||| |||||| |||| ||||  ||||||  |||||| | |||||| ||||||||||  ||||  |||| ||||||||||  ||||||| ||    
T  44000462 tgatttgctaaa-aatgaatgacatgacatgacaactctagttgtaccgtgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaagga 44000364  T
Q  118 caggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    || || |||||| | | ||||| |||||| | |||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||    
T  44000363 catgacaaaaacagaattttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatag 44000277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 26282353 - 26282475
Alignment:
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    |||||||||| ||  ||| ||| |||||||   ||||||||| |||  ||||||||||||||||||||||||| ||||| ||||| |||||||||| |||    
T  26282353 aaactggaggtaagagacgggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaa 26282452  T
Q  201 atagcatttcgtcacccaaaaat 223  Q
    ||||||||| ||| | |||||||    
T  26282453 atagcattttgtccctcaaaaat 26282475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 43175687 - 43175613
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||  |||||||| |||||||||||||||||    
T  43175687 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaaa 43175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 52300633 - 52300444
Alignment:
Q  26 taaagaatgaaggacaggacagaacaacttcagttgt---ccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacagga 122  Q
    |||| ||||||||||| |||||||||||||| |||||   ||  |||||||||  |||||  ||||||| ||   || |||||| ||| ||  |||||||    
T  52300633 taaaaaatgaaggacatgacagaacaacttcggttgttgtccaatgtttgattcataaaactgtttcagagacgggacaaactgcaggtaagggacagga 52300534  T
Q  123 taaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
     |||||||| ||||||||||| || |||||||||| | ||| ||||||||| | ||||||||| ||||||| || |||||| |||||||||    
T  52300533 caaaaactgaaatttttgtccatcaccaaaccacaacgcaattttttgtccca-gtacaagttgtctaaaacaccaaaatatcatttcgtc 52300444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 28624853 - 28624987
Alignment:
Q  67 tgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactt 166  Q
    ||||||||||||||||| ||||  | || |||||||||||||| |||  || ||||||||| | | ||||||||||||||   ||| |||| || || ||    
T  28624853 tgtttgatttgtaaaattgtttatgtgacatgataaactggagacaagagataggataaaa-cagaaatttttgtccctcattaaagcacaacataaatt 28624951  T
Q  167 tttgtcctacgtacaagttttctaaaatacaaaaat 202  Q
    ||||||||||||| ||||| ||||||||||||||||    
T  28624952 tttgtcctacgtataagttatctaaaatacaaaaat 28624987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 10747406 - 10747338
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    ||||||||||| |||| |||||||||||||||| ||||| ||||||||| | |||||||||||||||||    
T  10747406 cgtttgatttgttaaaaaatgaaggacaggacaaaacaatttcagttgttcagtgtttgatttgtaaaa 10747338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 34351303 - 34351442
Alignment:
Q  70 ttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt 169  Q
    |||||||||||||  |||||||||| |||| ||||| |||| ||  |||| || ||||||   |||| |||||||||  ||||||||| |||||||||||    
T  34351303 ttgatttgtaaaactgtttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaacttttt 34351402  T
Q  170 gtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  || |||||||| |||||||||  |||||| |||||    
T  34351403 gtcgcacatacaagttgtctaaaatatcaaaataacattt 34351442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 41694925 - 41694989
Alignment:
Q  159 cacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||||||| || |||||||| ||||||||||  ||||||||||| ||| |||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatactgaaatagcattttgtcccccaaaaat 41694989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 32768764 - 32768589
Alignment:
Q  50 caacttcagttgtccggtgtttgatttgtaaaatagtttcagg--gatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcg 147  Q
    |||||||| |||| | |||||||||||||||||| ||||||||  || |||| ||||   | ||||  |||| || ||||| || |||| |||||||||     
T  32768764 caacttcaattgtacagtgtttgatttgtaaaattgtttcagggagacatgacaaacaaaaagcaagagacatgacaaaaattgaaattattgtccctca 32768665  T
Q  148 ccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | |||||||| |||||||||  || | |  ||| | || |||||||||| |||||| | ||| |||||||||||||    
T  32768664 ctaaaccacatcacaactttccgttccaattactatttgtctaaaatactaaaataaccttttgtcacccaaaaat 32768589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 39215404 - 39215543
Alignment:
Q  70 ttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt 169  Q
    |||||||||||||  |||||| | | | || |||| ||||| ||  |||| || |||||||| |||||||  ||||  || ||||| | || || |||||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataatttttt 39215503  T
Q  170 gtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||| ||||||||||| |||||||||| |||||| |||||    
T  39215504 gtcccacgtacaagttgtctaaaataccaaaataacattt 39215543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 25954536 - 25954449
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaa 222  Q
    ||||||||| ||| |||||  ||||||||||||||||||  || || ||||| | |||||||| || ||| ||||||||| ||||||||    
T  25954536 atttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatactaatataacatttcgtc-cccaaaaa 25954449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 6143947 - 6144155
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||| || |||| |||||||||||||     
T  6143947 gtttgatttgatacaaaatgaaggacaggacagaacaactgcagttgtccaatgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaag 6144046  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||| ||||| ||||||| ||||||||| ||||| ||||    
T  6144047 ggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtctaaaacacaaaaataacattttgtca 6144146  T
Q  215 cccaaaaat 223  Q
    |||||||||    
T  6144147 cccaaaaat 6144155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 31004351 - 31004137
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  31004351 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 31004252  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    ||||   ||||||| ||||||||   |||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||| |||    
T  31004251 ggcacgggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtatt 31004152  T
Q  209 tcgtcacccaaaaat 223  Q
    ||||| |||||||||    
T  31004151 tcgtcccccaaaaat 31004137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 844678 - 844893
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  844678 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactag 844777  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  844778 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 844877  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  844878 tttgtccctcaaaaat 844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 42512725 - 42512939
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  42512725 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 42512824  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| ||||||||  |||||||| ||||  ||||||||| |||||||||||||||||||||||| || |||||||||  ||||||| |||    
T  42512825 ggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaatatcaaaatagaatt 42512924  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  42512925 ttgtcccccaaaaat 42512939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 1351391 - 1351604
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  1351391 ggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 1351490  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||   |||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  1351491 gcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 1351590  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  1351591 tgtctctcaaaaat 1351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 6029248 - 6029469
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaagga-----caggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgat 100  Q
    ||||||||||||||||||| |||| |||||||||     ||||||||||||||| ||||||||| |||||||||||||||||  |||||||||| |  |     
T  6029248 taagggtgcgtttgatttgttaaaaaatgaaggacaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaac 6029347  T
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    |||||| ||||||  ||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||||| || |||    
T  6029348 aaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaa 6029447  T
Q  201 atagcatttcgtcacccaaaaa 222  Q
    ||| ||||||||| ||||||||    
T  6029448 ataacatttcgtcccccaaaaa 6029469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 26764747 - 26764964
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||| || |||| |||||||||||| ||||||||| |||||||||||||| ||| |||| ||| | | ||||||||    
T  26764747 taagggtgcgtttgatttgctaaaaaataaaagacatgacagaacaactccagttgtccagtgtttgatttgtacaattgttttaggtacaagataaact 26764846  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||| ||||||| |||||||   ||||||||||||| || ||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||      
T  26764847 ggaggcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataat 26764946  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| | |||||||    
T  26764947 atttcgtccctcaaaaat 26764964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 6711003 - 6711215
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| ||||    
T  6711003 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagagg 6711102  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||     
T  6711103 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 6711202  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  6711203 gtccctcaaaaat 6711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 17888170 - 17887954
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||| ||||||||| |||| |||||| |||| |||| |||||||  ||||||||||||||||||||||||||  |||||||| | | || |||||    
T  17888170 taagggtgcatttgatttgctaaaaaatgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaact 17888071  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |    
T  17888070 ggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataac 17887971  T
Q  206 atttcgtcacccaaaaa 222  Q
    |||| ||| ||| ||||    
T  17887970 attttgtccccccaaaa 17887954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 32270566 - 32270358
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||     
T  32270566 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaag 32270467  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||  |||||||||||| |||     
T  32270466 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtcc 32270367  T
Q  215 cccaaaaat 223  Q
    | |||||||    
T  32270366 ctcaaaaat 32270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 15539844 - 15540059
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||| ||| |  | |||||||    
T  15539844 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacagaacaaactgg 15539943  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||| ||| || |||||||  || ||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||| |||    
T  15539944 aggcaagagacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataacat 15540043  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  15540044 tttgtcccccaaaaat 15540059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 35387267 - 35387466
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||    
T  35387267 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 35387366  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    | ||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  35387367 gtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattt 35387466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 26118170 - 26118384
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||| ||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  26118170 gggtgcgtatgatttgctaaaaaatgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 26118269  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||| ||||||| |||||||   ||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||    
T  26118270 ggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaataccaaaatagcatt 26118369  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  26118370 ttgtccctcaaaaat 26118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 30105631 - 30105849
Alignment:
Q  6 taagggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    ||||||||| ||||||||| |||| || |||||||||||| |||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||    
T  30105631 taagggtgcttttgatttgctaaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtaaaggacaaac 30105730  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  ||||||| |||||||   ||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||    
T  30105731 tggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatag 30105830  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| | |||||||    
T  30105831 cattttgtccctcaaaaat 30105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 42510744 - 42510530
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||  |||||||| |||||||||| ||||||  |||||||| | | || ||||||||    
T  42510744 gggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactgga 42510645  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    | |||  ||||||| |||||||   ||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  42510644 gacaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 42510545  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  42510544 ttgtccctcaaaaat 42510530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 16476109 - 16476326
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| ||||||||| |||| || |||| || |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  16476109 agggtgtgtttgatttgctaaaaaatgaaggagaggagaggacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactag 16476208  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    | ||||  |||||||||||||||   ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  16476209 atgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 16476308  T
Q  208 ttcgtcacccaaaaattg 225  Q
    || ||| |||||||||||    
T  16476309 tttgtcccccaaaaattg 16476326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 11772586 - 11772801
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| || | |||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||||||| | | |  || ||||    
T  11772586 agggtgcgtttgatttgctagaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaaggcaatctgg 11772685  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||| |||| || ||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| || | | |||||| ||||||| ||    
T  11772686 aggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagtat 11772785  T
Q  208 ttcgtcacccaaaaat 223  Q
    |||||| |||||||||    
T  11772786 ttcgtcccccaaaaat 11772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32289291 - 32289514
Alignment:
Q  1 caccataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgat 100  Q
    |||||| | ||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | ||     
T  32289291 caccattatggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggac 32289390  T
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    ||| |||||||||  |||| || |||||||   ||||||||||||| |||||||||||||||||||||||| | ||||||||||| | |||||||| |||    
T  32289391 aaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtttaaaataccaaa 32289490  T
Q  201 atagcatttcgtcacccaaaaatt 224  Q
    ||||||||| ||| | ||||||||    
T  32289491 atagcattttgtccctcaaaaatt 32289514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 50304871 - 50304656
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  50304871 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 50304772  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||   ||| || ||||||||  |||||||||||||  ||||||||||||||||||||||||  ||||  ||||| |||||||||  ||||||||||    
T  50304771 aggcaagaaacaagacaaaaactgatatttttgtccctctgcaaaccacagcacaactttttgtctcacgtttaagttgtctaaaatatcaaaatagcat 50304672  T
Q  208 ttcgtcacccaaaaat 223  Q
    || |||  ||||||||    
T  50304671 tttgtcctccaaaaat 50304656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 45490830 - 45491044
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||| ||||||||||||||| |  |||||||| |||||||||||||||||  |||||| | | | || ||||||||    
T  45490830 gggtgcgtttgatttgctaaaaaatgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactgga 45490929  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  45490930 ggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 45491029  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  45491030 ttgtccctcaaaaat 45491044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 13994056 - 13994243
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||  |||||| ||| |||| ||| |||||||||   || ||| |||||||| ||    
T  13994056 aaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaa 13994155  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||| |||||||||| ||||||||||||||  | ||||||||| |||||||||| |||||||||||||||| |||||||||    
T  13994156 tttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaatagcatttcgtc-cccaaaaat 13994243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 16451344 - 16451132
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||||||||| |||||||  ||||||||  ||||||||||||||||  |||||||| | | || ||||||||||    
T  16451344 gtgcgtttgatttgttaaaaaatgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 16451245  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||| ||| |||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||||||||     
T  16451244 caagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcatttt 16451145  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  16451144 gtccctcaaaaat 16451132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 51264714 - 51264514
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  51264714 gggtgcgtttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 51264615  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| | |||||||| |||||||||||    
T  51264614 ggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatagcatt 51264515  T
Q  209 t 209  Q
    |    
T  51264514 t 51264514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 28340256 - 28340472
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||| ||||||||||||| |||| ||| |||||||||| |||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||    
T  28340256 taaggatgcgtttgatttgctaaaaaat-aaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaact 28340354  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  |||| || |||||||   |||||||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||    
T  28340355 ggaggcaagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagc 28340454  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  28340455 attttgtccctcaaaaat 28340472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 45659043 - 45658826
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| || | |||||||||||||||| ||||||| ||||||||  |||| ||||||||||||  |||||| | | | || |||||    
T  45659043 taagggtgcgtttgatttgctagaaaatgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgtttcaagtacaggacaaact 45658944  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    |||| |||| |||| || ||||||||  ||||||||| ||| |||||||||| ||||||||||||||| || |||||||| | | |||||| ||||||||    
T  45658943 ggagacaaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagc 45658844  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  45658843 atttcgtcccccaaaaat 45658826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 24339593 - 24339793
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||  |||||| | |||||||||||||| ||  |||||||| | |||| ||||||||    
T  24339593 gggtgcgtttgatttgctaaaaaataaaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactgga 24339692  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgcc-aaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||  ||||||| |||||||   ||||||||||||| || |||||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||    
T  24339693 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagttgtctaaaataccaaaatagcat 24339792  T
Q  208 t 208  Q
    |    
T  24339793 t 24339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 41967805 - 41968020
Alignment:
Q  11 gtgcgtttgatttga-taaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| || ||||||||||||||  |||||||| | | || ||||| |||    
T  41967805 gtgcgtttgatttgactaaaaaatgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactagag 41967904  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  |||| || |||||||   ||||||||||||  |||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||| |||    
T  41967905 gcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagccttt 41968004  T
Q  210 cgtcacccaaaaattg 225  Q
     ||| |||||||||||    
T  41968005 tgtctcccaaaaattg 41968020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 39282111 - 39281899
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| ||||  |||||||||| ||||  | |||||||||||| | |||||||||||||||||  |||| ||| | | || ||||| || |    
T  39282111 gtgcgtttgatttgctaaaacatgaaggacatgacaagataacttcagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatg 39282012  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  39282011 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaataacatttc 39281912  T
Q  211 gtcacccaaaaat 223  Q
    |||  ||||||||    
T  39281911 gtcctccaaaaat 39281899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 7184134 - 7183923
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| ||||   |||| |||||||||||| ||||| |||||||| ||||||||| |||||||  |||||||| | | || |||||||||||    
T  7184134 tgcgtttgatttgctaaaatttgaaagacaggacagaataactttagttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaactggaggc 7184035  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||| || |||| |||| |    
T  7184034 aagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaatatagtattttg 7183935  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  7183934 tctctcaaaaat 7183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 5109945 - 5109732
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||  ||||||||||||||| ||||||| | |||||||||||||||||  |||||||| | | || ||| ||||||    
T  5109945 gtgcgtttgatttgctaaaaaatgaagtgcaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggagg 5109846  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||    |||||||||||| |||||||||| ||||||||||||||| | ||||||||| |||||||| | |||||| |||||     
T  5109845 caagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttgtctaaaatgc-aaaataacatttt 5109747  T
Q  211 gtcacccaaaaattg 225  Q
    ||| |||||||||||    
T  5109746 gtcccccaaaaattg 5109732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 12890425 - 12890243
Alignment:
Q  41 aggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttg 140  Q
    ||||||||||||||  |||||||| |||||||||||||||||  ||||| || | | ||||||||||||||||  ||||||| |||||||   |||||||    
T  12890425 aggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggacaggacaaaaactcatatttttg 12890326  T
Q  141 tccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||  ||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||| ||| | |||||||    
T  12890325 tccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaaatagcattttgtccctcaaaaat 12890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 1601387 - 1601178
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||| |||||| | |||||||||||||||||  |||||||| | | || ||||||||||    
T  1601387 gtgcgtttgatttgctaaa-aatgaagaacatgacagaacaactttagttgttcagtgtttgatttgtaaaacggtttcaggtacaggacaaactggagg 1601289  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  || || | |||||||   ||||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||| ||||||||||||     
T  1601288 caagggatagaacaaaaactc--atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcatttt 1601191  T
Q  211 gtcacccaaaaat 223  Q
    |||  ||||||||    
T  1601190 gtccaccaaaaat 1601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 16437574 - 16437381
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| |||||||||||| | |||||||||  ||||||||  ||||||||||||||||  |||||||  | | || ||||| ||||||||     
T  16437574 tttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaag 16437475  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  16437474 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattt 16437381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 41973131 - 41972930
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||| |||||||||| |||| |||||||||||||| |||||||||  |||||||| |||||||||||||||||  |||||||  | | || |||||||    
T  41973131 agggtgagtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactgg 41973032  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||||| ||||||||||  |||||||||||||  ||||||||||| |||||||||| |||||| |||    
T  41973031 aggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacat 41972932  T
Q  208 tt 209  Q
    ||    
T  41972931 tt 41972930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 16387069 - 16386859
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||  |||| ||||||||||| |||||||||  |  |||||| | |||||||||||||||||  |||||||| | | || ||||| |||||    
T  16387069 tgcgtttgatttc-taaaaaatgaaggacatgacagaacagttctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggc 16386971  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |    
T  16386970 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttg 16386871  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  16386870 tccctcaaaaat 16386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 49303309 - 49303522
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| ||| ||| |||| |||||||  | |||||| |||||||||||||||||  |||||||| ||| || ||||||||    
T  49303309 gggtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtataagacaaactgga 49303408  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    | |||  |||| || |||||||   |||||||||| || |||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  49303409 gacaagggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatactaaaataacatt 49303508  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  49303509 ttgtc-cccaaaaat 49303522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 17327606 - 17327818
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||| ||||||||||  |||||||| | | || |||||||||     
T  17327606 gtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagt 17327705  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| ||||| |||||||||||||||||||  | |||||| || |||||||||| ||||||  ||||     
T  17327706 caagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatatttt 17327805  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  17327806 gtcccccaaaaat 17327818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 50540561 - 50540349
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||  |||||||| ||| |||| ||  |||||||| |||||||||||||||||  |||| ||| | | || ||||||||||    
T  50540561 gtgcgtttgatttgctaaaaaagaaaggacagaacaaaacagctctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggagg 50540462  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| | |||||   |||||||||| ||  ||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  50540461 caagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 50540362  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  50540361 gtcccccaaaaat 50540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 51703118 - 51703318
Alignment:
Q  9 gggtgcgtttgatttga-taaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  | |||||| |||||||||||||||||| |||||| | | | |||||||||     
T  51703118 gggtgcgtttgatttgactaaaaaatgaaggacaagacagaacaactctaattgtccagtgtttgatttgtaaaattgtttcaagtacaggataaactga 51703217  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||| | |||||||   |||||||| |||| || ||||||| ||||||||||||||| || |||| ||| ||||||||||||||||| |||    
T  51703218 aggcaagggacagaacaaaaactcatatttttgttcctcacc-aaccacaacacaactttttgtcccacctacatgttgtctaaaatacaaaaataacat 51703316  T
Q  208 tt 209  Q
    ||    
T  51703317 tt 51703318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 44737996 - 44738192
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||| |||| |||| |||||| |||| ||||||||||||  | |||||| |||||| ||||||||||  |||||||| | |||| ||  |||    
T  44737996 agggtgcgtttgttttgctaaaaaatgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacatgacaacttgg 44738095  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||  |||||||  ||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||    
T  44738096 aggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatagcaaaatag 44738192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 38086973 - 38087167
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||| ||||| ||||||| | | | |||||| |||| ||||  |||| || |||||||    
T  38086973 aatgaaggataggacaaaacaacttcagttgtcctgtgtttgatttataaaacagtttcaagtacaggataaaatggatgcaatggacatgacaaaaact 38087072  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaattg 225  Q
       |||||||||| || | |||||||| ||||||||||||||| | ||||||||| |||||||  | |||||||||||||||  |||||||||||    
T  38087073 catatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaaatccaaaatagcatttcgttccccaaaaattg 38087167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 16704919 - 16704731
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||  |||||||| | |||| |||||||||||||  |||| || ||||||    |    
T  16704919 aaggacaggacagaacaacttcaattgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaacatata 16704820  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||  |||||||||| ||||||| ||||||  || |||||||| |||||||||| |||||||| ||| |||  ||||||||    
T  16704819 tttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaataccaaaatagctttttgtcctccaaaaat 16704731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 21071835 - 21071729
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||| |||||||| | |||| ||||||    
T  21071835 aagggtgcgtttgatttgctaaagaatgaagtacatgacagaacaacttcaattgtccagtgtttgatttgtaaaattgtttcaggtacatgacaaactg 21071736  T
Q  107 gaggcaa 113  Q
    |||||||    
T  21071735 gaggcaa 21071729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 50382412 - 50382572
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggagg---caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcaca 162  Q
    ||||||||||| |||||  |||||||||| || | ||||||||||   |||  ||||||| |||||||| ||||||||||| || |||||||||| ||||    
T  50382412 gtgtttgatttttaaaactgtttcagggacataacaaactggaggaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacaca 50382511  T
Q  163 actttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| ||||| ||| | |||||||    
T  50382512 actttttgtcccacgtacaagttgtctaaaacacaaaaataacattttgtccctcaaaaat 50382572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 25539975 - 25539860
Alignment:
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||| |||| || ||||||||  ||||||||||||| |||||||||| ||||||||||||||| || |||||||| | | |||||| ||||||||||    
T  25539975 aggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcat 25539876  T
Q  208 ttcgtcacccaaaaat 223  Q
    |||||| |||||||||    
T  25539875 ttcgtcccccaaaaat 25539860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 10384584 - 10384372
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||| || |     |||||||  |||||||  ||||||||||||||||||  ||||||| | |  | ||| |    
T  10384584 taagggtgcgtttgatttgctaaaaaatgaagaactg-----aacaactctagttgtctagtgtttgatttgtaaaattatttcaggtacagtacaaatt 10384490  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||| ||||| |||| || |||||||   |||||||||| || | |||||||||||||||||||||||| |||||||| || |||||||    |||||| |    
T  10384489 ggatgcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaaattatctaaaaattcaaaataac 10384390  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  10384389 atttcgtcccccaaaaat 10384372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 46155125 - 46154919
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||  | |||| | ||||||||||||||||||  ||||||| |   || |||||||||    
T  46155125 ggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaaattatttcaggtactggacaaactggag 46155026  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgc-------caaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaat 202  Q
    |  |  ||||||| |||||||   ||||||||||||| |       ||||| ||||||||||||||||||| || |||||||| |||||||||| |||||    
T  46155025 gtgagggacaggacaaaaactcatatttttgtccctcaccaaactacaaactacagcacaactttttgtcccacttacaagttgtctaaaataccaaaat 46154926  T
Q  203 agcattt 209  Q
    | |||||    
T  46154925 aacattt 46154919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 7837351 - 7837152
Alignment:
Q  11 gtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||| |||||||| |||| || ||||||| | || ||||||||||||||||| | |||||||||||||||||  |||||||| | |||| ||||| |||    
T  7837351 gtgcgcttgatttgctaaaaaaatgaaggatatgatagaacaacttcagttgttcagtgtttgatttgtaaaactgtttcaggaacatgacaaactagag 7837252  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  |||| || ||||| || | ||||||||| |  ||||| |||| ||||||||||||||  ||  ||||||| |||||||||  ||||||| ||||    
T  7837251 gcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcacagacaagttgtctaaaatatcaaaatagtattt 7837152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 38663323 - 38663228
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||| ||| | ||||||||||    
T  38663323 tgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacaggataaactgg 38663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 570549 - 570405
Alignment:
Q  68 gtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa-tgacaggataaaaactgcaatttttgtccctcgccaaaccaca--gcacaac 164  Q
    ||||||||| |||||| ||||||| || | |||||||||||||||||  |||| ||||||||| | |||||||||||||| ||||||||||  |||||||    
T  570549 gtttgatttataaaattgtttcagcgacaagataaactggaggcaaagggacatgataaaaacagaaatttttgtccctcaccaaaccacaatgcacaac 570450  T
Q  165 tttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||||||   |||| ||||| |||||||||  |||||| |||||    
T  570449 tttttgtctcgcgtataagttgtctaaaatatcaaaataacattt 570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 42705249 - 42705407
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgca-atttttgtccctcgccaaaccacagcacaac 164  Q
    |||||||||||||||||  |||||||| | | || ||||||||| |||  ||| ||| |||||   || ||||||||||||| |||||||||| ||||||    
T  42705249 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacgggaaaaaaaactcatatttttgtccctcaccaaaccacaacacaac 42705348  T
Q  165 tttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||| |||| ||||||||||| ||| ||||   |||||||||||| ||| |||||||||    
T  42705349 ttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaat 42705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 8839120 - 8838983
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    ||||| |||||||||||||| |||| ||||||||||| |||||||||||| || ||||||  ||||||||||||||||  ||||| || | | || ||||    
T  8839120 ataagagtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaaactgtttctggtacaagacaaac 8839021  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtc 142  Q
    |||||| ||  |||| || ||||||||  |||||||||    
T  8839020 tggaggaaatggacatgacaaaaactgatatttttgtc 8838983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 38663226 - 38663137
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||| ||||| ||| | |||||||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaat 38663137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 39793023 - 39792826
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||| |||||| || |  |||||||  ||||| | |||||||||||| ||||  |||| ||||| | |||||| |||||     
T  39793023 gtgcgtttgatttgctaaa-aatggaggacatgaaatgacaacttaggttgtacagtgtttgatttgcaaaactgttttagggacaagataaattggaga 39792925  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||| || | || ||||| || |||| |||||| || |||||||||| |||||||| ||||   |||||||| || |||||||||  |||||| |||||    
T  39792924 caaaagatatgacaaaaattgaaattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaataataaaataacattt 39792826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 40811325 - 40811399
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||| |||||||| | ||||||||| |||||    
T  40811325 agggtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttgtccagcgtttgatttataaaa 40811399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 3414814 - 3415022
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| ||||  |||||||| | |||| |||||||  | || ||| |||||||||||||||||   ||| ||| |   || || |||||| | |     
T  3414814 gtttgatttgttaaaatatgaaggatatgacaaaacaactctaattatccagtgtttgatttgtaaaactattttaggtactggacaatctggagacgag 3414913  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||   ||||||||||||| |||||| ||| || || ||||| ||| |||||| |||| | |||||||| |||||||||||| |||     
T  3414914 ggacaggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtcc 3415013  T
Q  215 cccaaaaat 223  Q
    |||||||||    
T  3415014 cccaaaaat 3415022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 26733775 - 26733579
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||| ||| |||| ||||||| ||| ||||  |||||||||||||| || ||||||||||||||||  ||||   |||   || ||||| |    
T  26733775 agggtgcatttgacttgctaaaaaatgaagaacaagacatgacaacttcagttgtacgatgtttgatttgtaaaactgtttttaggaccggacaaactag 26733676  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    || | |  |||| || |||||||| |||| ||||||| | | |||||| | |||||||||||| |  | ||||||||| |||||||||| |||||||    
T  26733675 agacgatggacatgacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatag 26733579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 504388 - 504542
Alignment:
Q  51 aacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgcca 150  Q
    |||||||||||| | | |||||||||| ||||| |||| ||||| | || ||||| |||||||  ||||  | |||||||| || ||||||| ||| | |    
T  504388 aacttcagttgtacagcgtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcacta 504487  T
Q  151 aaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||| | ||||| ||||||||| || || ||||| |||||||||| ||| ||||    
T  504488 aaccataacacaattttttgtcccacatagaagttgtctaaaataccaaagtagc 504542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 16643186 - 16643238
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagtt 60  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||||| |||||    
T  16643186 agggtgcgtttgatttgctaaaaaatgaaggacagaacagaacaactgcagtt 16643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 47242468 - 47242572
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    |||||||| |||| ||||| |||| ||| || |||| ||||  ||||||||||||||  ||||||| ||||||||||| ||||  |||| |||| |||||    
T  47242468 taagggtgtgtttcatttgctaaaaaataaatgacatgacatgacaacttcagttgtatggtgtttaatttgtaaaattgtttatgggacatgacaaact 47242567  T
Q  106 ggagg 110  Q
    |||||    
T  47242568 ggagg 47242572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 25540037 - 25539982
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtcc 64  Q
    |||||||||||||||| || | ||||||||| |||||||||||||| |||||||||    
T  25540037 gggtgcgtttgatttgctagaaaatgaaggataggacagaacaactccagttgtcc 25539982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 16643287 - 16643341
Alignment:
Q  159 cacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
    ||||||||||||||| || |||| ||| ||||||||||||||||| |||||||||    
T  16643287 cacaactttttgtcccacatacaggttgtctaaaatacaaaaataccatttcgtc 16643341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 6771562 - 6771401
Alignment:
Q  34 gaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgca 133  Q
    |||||||| ||||  |||| || | |||| ||||||||||||| |||||  |||| ||||| |||||||| | ||| |||  |||| || |||||||  |    
T  6771562 gaaggacaagacatgacaattttatttgtgcggtgtttgatttataaaactgttttagggacatgataaattagagacaagggacaagacaaaaactaaa 6771463  T
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata 195  Q
    ||| ||||| ||| | ||| |||| ||||||||||| ||| || ||||||||  ||||||||    
T  6771462 attcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgactaaaata 6771401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 7837571 - 7837430
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||| | || |||| |||||||||||| | ||||||||||| |||||  |||||||| | |||| ||||| ||||||   |||| || ||||| |    
T  7837571 aatgaaggatatgatagaataacttcagttgttcagtgtttgatttataaaactgtttcaggaacatgacaaactagaggcaggggacatgacaaaaatt 7837472  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtc 172  Q
    | | ||||||||| |   |||| |||| ||||||||||||||    
T  7837471 gaattttttgtccattatcaaatcacatcacaactttttgtc 7837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 23799607 - 23799652
Alignment:
Q  124 aaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt 169  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  23799607 aaaaactgatatttttgtccctcaccaaaccacagcacaacttttt 23799652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 25343213 - 25343378
Alignment:
Q  59 ttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatg-acaggataaaaactgcaatttttgtccctcgccaaaccaca 157  Q
    |||||| | ||||||||| ||||| |||||||   | | || |||||||| ||||||| | |||||||||||    |||||||||| || | |||||| |    
T  25343213 ttgtcctgcgtttgatttataaaacagtttcatatacaggacaaactggatgcaaatggataggataaaaacacatatttttgtccttcactaaaccata 25343312  T
Q  158 gcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | |||||||||||||  ||||||||||| || ||||  | ||||||| |||||||| | |||||||    
T  25343313 gtacaactttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtccctcaaaaat 25343378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 46447823 - 46447688
Alignment:
Q  69 tttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttt 168  Q
    |||||||||||||||| | | ||||||| |||| | |||||||||  |||  || |||||||  ||||||| | ||||   |||  ||| ||||||||||    
T  46447823 tttgatttgtaaaataatattagggataggatataatggaggcaagggacctgacaaaaactaaaatttttattcctccttaaattacatcacaactttt 46447724  T
Q  169 tgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||| | ||||||||||| |||||||||  |||||||    
T  46447723 tgttccacgtacaagttatctaaaatatcaaaatag 46447688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 20495006 - 20495060
Alignment:
Q  169 tgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  20495006 tgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 20495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 32467925 - 32467971
Alignment:
Q  158 gcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||||||||||||||||||||| |||| ||||  |||||||    
T  32467925 gcacaactttttgtcctacgtacaagttgtctacaatatcaaaatag 32467971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 16862484 - 16862529
Alignment:
Q  126 aaactgcaatttttgtccctcgccaaaccacagcacaactttttgt 171  Q
    |||||| ||||||||||| |||||||| ||| ||||||||||||||    
T  16862484 aaactgaaatttttgtccttcgccaaatcaccgcacaactttttgt 16862529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 34664012 - 34663932
Alignment:
Q  143 cctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||| |||||||||| |||||||||||| || || || || || |||||||||  |||||| ||||| ||||| |||||||    
T  34664012 cctcaccaaaccacaacacaactttttgacccacttataaattgtctaaaatatcaaaataacattttgtcactcaaaaat 34663932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 13573 - 13786
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| |  | ||||||||    
T  13573 gggtgcgtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactgga 13672  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  || |||| |||||||| |||||||||||||| ||||||||||| |||||||||||||| || |||||||| ||||||| || |||||||||||    
T  13673 ggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaacaccaaaatagcatt 13772  T
Q  209 tcgtcacccaaaaa 222  Q
     |||| ||||||||    
T  13773 ccgtcccccaaaaa 13786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 50729413 - 50729619
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||| |  | ||||||    
T  50729413 aagggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactg 50729512  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||  |||| || |||||||| ||||||||||  || |||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||    
T  50729513 gaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagca 50729612  T
Q  207 tttcgtc 213  Q
    |||||||    
T  50729613 tttcgtc 50729619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 24002553 - 24002352
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||  |||||||| ||||||||||||||||| ||||||||| | | || |||||||    
T  24002553 agggtgcgtttgatttgctaaaaaatgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactgg 24002454  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  24002453 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 24002354  T
Q  208 tt 209  Q
    ||    
T  24002353 tt 24002352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 3649852 - 3649636
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||  |||||||||||||||||  |||||||||| |  | |||||    
T  3649852 taagggtgcgtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcagggacagaacaaact 3649753  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    | ||||||  ||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| || |||||| |    
T  3649752 gaaggcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataac 3649653  T
Q  206 atttcgtcacccaaaaa 222  Q
    |||||||| ||||||||    
T  3649652 atttcgtcccccaaaaa 3649636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 50178365 - 50178580
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  50178365 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 50178464  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaac-tttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||  ||||||| ||||||||  |||||||| ||||  |||||||||||||||| ||||||||| ||||||||||| |||||||||  ||||||||||    
T  50178465 ggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaatatcaaaatagcat 50178564  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  50178565 tttgtcccccaaaaat 50178580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 44324212 - 44324429
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| || | ||||||||||| |||||||||||| ||||||| | |||||||||||||||||  |||||||| | | || |||||    
T  44324212 taagggtgcgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaact 44324311  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
     |||||||| ||| ||| ||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||| | | |||||| ||||||||    
T  44324312 agaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgttttaaataccaaaatagc 44324411  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||||||| |||||||||    
T  44324412 atttcgtcccccaaaaat 44324429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 56154835 - 56154620
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  56154835 agggtgcgtttgatttgctaaaaaatgaaggttaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaactgg 56154736  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||| | |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  56154735 aggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcat 56154636  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  56154635 tttgtccctcaaaaat 56154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 20802406 - 20802618
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||| |||| ||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  20802406 gtgcgtttgatttgttaaaaaatgaaggataggacagaacaactttagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 20802505  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  20802506 caagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 20802605  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  20802606 gtccctcaaaaat 20802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 38486130 - 38486344
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | |||||||||||    
T  38486130 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactgga 38486229  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || |||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||    
T  38486230 ggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcatt 38486329  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  38486330 ttgtccctcaaaaat 38486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 44649037 - 44649251
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||| || ||||||||||||||  |||||||| | | || ||||||||    
T  44649037 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaactgga 44649136  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| ||||||||  |||||||||||||  ||||||||| ||||||||||||||| | ||||||||| |||||||||  |||||||||||    
T  44649137 ggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcatt 44649236  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  44649237 ttgtcccccaaaaat 44649251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 9807371 - 9807155
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| ||||  |||||||| ||||||| |||||||||||||||| |||||||||||||||||  |||||||| | | || |||||    
T  9807371 taagggtgcgtttgatttgctaaaacatgaaggataggacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaact 9807272  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
     || ||||  ||||||| |||||||  | ||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  9807271 agatgcaatggacaggacaaaaactcaactttttgt-cctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaatagc 9807173  T
Q  206 atttcgtcacccaaaaat 223  Q
    ||||||||  ||||||||    
T  9807172 atttcgtcctccaaaaat 9807155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 1231524 - 1231310
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | |||||||||||    
T  1231524 gggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactgga 1231425  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||| ||| |||||||   ||||||||||||| | |||||||||||||||||||||||| ||||||||||| |||||||||  |||||| ||||    
T  1231424 ggcaagagactggacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacatt 1231325  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  1231324 ttgtccctcaaaaat 1231310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 9512209 - 9512427
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||| ||||||||||||| |||| || |||||||| || |||||||||  |||||| | |||||||||||||||||  |||||||| | | |||||||    
T  9512209 ataaggatgcgtttgatttgctaaaaaacgaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaac 9512308  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||||| | |||||| |||||||   |||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  9512309 tggaggcaagtaacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 9512408  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| | |||||||    
T  9512409 cattttgtccctcaaaaat 9512427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 23522093 - 23521879
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  23522093 gggtgcgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 23521994  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     ||||  || |||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  23521993 agcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 23521894  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  23521893 ttgtccctcaaaaat 23521879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 52949933 - 52949719
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||| ||||||||||  |||||||| | | || ||||||||    
T  52949933 gggtgcgtttgatttgttaaaaaatgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactgga 52949834  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| ||||||||  |||||||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  52949833 ggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 52949734  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  52949733 ttgtcccccaaaaat 52949719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 16320732 - 16320520
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||| || |||| ||| |||||| ||||||||||||| ||||||||| || ||||||||||||||  || ||||| ||| || |||||||    
T  16320732 agggtgcgtttgatatgctaaaaaat-aaggactggacagaacaactccagttgtccagtatttgatttgtaaaactgtctcaggtataggaaaaactgg 16320634  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||| ||    
T  16320633 aggcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaat 16320534  T
Q  208 ttcgtcacccaaaa 221  Q
    ||| || |||||||    
T  16320533 ttcatcccccaaaa 16320520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 50727783 - 50728000
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||  |||||||||||||||||  |||||||| | |||| |||||    
T  50727783 taagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaact 50727882  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    | ||||||  ||||||| |||||||   |||||||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |    
T  50727883 gaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataac 50727982  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  50727983 attttgtccctcaaaaat 50728000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 50735797 - 50736014
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||  |||||||||||||||||  |||||||| | |||| |||||    
T  50735797 taagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaact 50735896  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    | ||||||  ||||||| |||||||   |||||||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |    
T  50735897 gaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataac 50735996  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  50735997 attttgtccctcaaaaat 50736014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 39078868 - 39078660
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||||||| |  | |||||||||||||     
T  39078868 gtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 39078769  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     || |||| |||| ||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||| ||||||| || |||||| ||||| |||     
T  39078768 agataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtcc 39078669  T
Q  215 cccaaaaat 223  Q
    |||||||||    
T  39078668 cccaaaaat 39078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 32181473 - 32181262
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||||| ||||||  ||||||| |||||||| |||||||||||||||||  |||||| | | | || ||||| || ||    
T  32181473 tgcgtttgatttgctaaaaaatgaaggataggacatgacaactttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgc 32181374  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  32181373 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcg 32181274  T
Q  212 tcacccaaaaat 223  Q
    || |||||||||    
T  32181273 tcccccaaaaat 32181262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 38812731 - 38812533
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||| ||||| |||| ||| |||||||||||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||||||    
T  38812731 gtgcgtttcatttgctaaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 38812632  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  38812631 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 38812533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 2725011 - 2725219
Alignment:
Q  14 cgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaa 113  Q
    ||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||   ||| ||| | | || |||||||||||||    
T  2725011 cgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaa 2725110  T
Q  114 atgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtc 213  Q
      ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||    
T  2725111 gggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcc-acgtacaagttgtctaaaataccaaaatagcattttgtc 2725209  T
Q  214 acccaaaaat 223  Q
     | |||||||    
T  2725210 cctcaaaaat 2725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 33552712 - 33552929
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||| |||||||||||| |||||||  |||||| | |||||||||||||||||  |||||||| | | || ||| |    
T  33552712 taagggtgcgtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaatt 33552811  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||| ||||  |||| || |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  33552812 ggatgcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagc 33552911  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  33552912 attttgtccctcaaaaat 33552929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 36886148 - 36885931
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| ||| ||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||    
T  36886148 taagggtgcgtttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaact 36886049  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||| ||| |||||||| || ||||||||||  |||||||    
T  36886048 ggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatacctaaatagc 36885949  T
Q  206 atttcgtcacccaaaaat 223  Q
    |||| ||| | |||||||    
T  36885948 attttgtccctcaaaaat 36885931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 55594096 - 55593884
Alignment:
Q  12 tgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    ||||||||||||| |||| || ||||| ||||||||||||||||  |||||||| || ||||||||||||||  |||||||| | |||||||||||||||    
T  55594096 tgcgtttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaactggagg 55593997  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||| ||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||| |||||     
T  55593996 caagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaataacatttt 55593897  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  55593896 gtccctcaaaaat 55593884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 29785406 - 29785624
Alignment:
Q  6 taagggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||    
T  29785406 taagggtgcgtttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaac 29785505  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||| |||  ||||| | |||||||   ||||||||||||| |||||||||| |||| |||||||||| ||||||||||| |||||||||| |||||||    
T  29785506 tggagacaagggacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatag 29785605  T
Q  205 catttcgtcacccaaaaat 223  Q
    ||||| ||| | |||||||    
T  29785606 cattttgtccctcaaaaat 29785624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 33176905 - 33177119
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||| ||||||||||| |||| ||| ||||| | |||||||||| || |||||||| |||||||||||||||||  |||||||| | | || ||||||||    
T  33176905 gggtacgtttgatttgctaaaaaataaaggatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 33177004  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||| ||||||| |||||||||| |||||| ||||    
T  33177005 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaataccaaaataacatt 33177104  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  33177105 ttgtcccccaaaaat 33177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 47642388 - 47642578
Alignment:
Q  33 tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgc 132  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||  |||||||| | | || |||||||||| ||  |||| |||||||||||     
T  47642388 tgaaggacaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactga 47642487  T
Q  133 aatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
     |||||||||||||  ||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||| ||| |||||||||    
T  47642488 tatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 47642578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 20517893 - 20518110
Alignment:
Q  8 agggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||  |||||| | |||||||||||||||||  |||||||| | | || ||||||    
T  20517893 agggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactg 20517992  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||  ||||||| ||||| |   ||||||||||||| ||||| ||||||| ||||| |||||| ||||||||||| |||||||||| |||||||||    
T  20517993 gaggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagca 20518092  T
Q  207 tttcgtcacccaaaaatt 224  Q
    ||| ||| | ||||||||    
T  20518093 ttttgtccctcaaaaatt 20518110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 12601099 - 12600899
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||| ||||||||||||||||| ||||||||| | | || ||||||||    
T  12601099 gggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactgga 12601000  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |  ||  |||| || |||||||   |||||||||||||  ||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||||||    
T  12600999 gataagggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcatt 12600900  T
Q  209 t 209  Q
    |    
T  12600899 t 12600899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 222
Target Start/End: Complemental strand, 26083551 - 26083338
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||| ||||| || | |||||||||||  |||||||||||||||||||   |||||||||||||||||| |||||||||| |  | |||||||    
T  26083551 agggtgcgtttaatttgttagaaaatgaaggaca--acagaacaacttcagttgtttagtgtttgatttgtaaaattgtttcagggacagaacaaactgg 26083454  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata-caaaaatagca 206  Q
    ||||||  |||| || |||||||| |||||||||||||| ||||||||||||| |||||||||||| || |||||||| ||||||| | | |||||| ||    
T  26083453 aggcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtctaaaacacccaaaataaca 26083354  T
Q  207 tttcgtcacccaaaaa 222  Q
    ||||||| ||||||||    
T  26083353 tttcgtcccccaaaaa 26083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 36497431 - 36497231
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||| |||||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  36497431 agggtgcgtttgatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 36497332  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    || |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||  ||||||||||    
T  36497331 agacaagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcat 36497232  T
Q  208 t 208  Q
    |    
T  36497231 t 36497231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 46680383 - 46680583
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |  |||||| | |||||||||||||||||  |||||||| | | || ||||||||    
T  46680383 gggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 46680482  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||  |||||||||||||||||||||||||  |||||||| || |||||||||| | |||||||||    
T  46680483 ggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccataatagcatt 46680582  T
Q  209 t 209  Q
    |    
T  46680583 t 46680583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 50186741 - 50186539
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||| || |||||||||  |||||| | |||||||||||||||||| |||| |||   | || ||||| ||    
T  50186741 gggtgcgtttgatttgctaaaaaatgaaggacaagaaagaacaactctagttgttcagtgtttgatttgtaaaattgttttaggtgcaggacaaactaga 50186642  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||| |||||||||||   ||||||||||||| |||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||    
T  50186641 ggcaagggacgggataaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatacaaaaatagcatt 50186542  T
Q  209 tcg 211  Q
    |||    
T  50186541 tcg 50186539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 20694578 - 20694369
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| | |||||||||  |||||||||||  |||||||| |||||| ||||||||||  |||| ||| | | || |||||| |||||||    
T  20694578 gtttgatttgctaaaaactgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaa 20694479  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||   ||||||||||||| |||||||||| | ||||||||||||| ||||||||||| |||||||||| |||||||||||| |||     
T  20694478 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtcc 20694379  T
Q  215 cccaaaaatt 224  Q
    ||||||||||    
T  20694378 cccaaaaatt 20694369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 24210525 - 24210332
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| |||||| || ||||| ||||||||  | ||||||||||||||||||||||||  |||||||| | | || |||||||||||||      
T  24210525 tttgatttgctaaaaaatgaaagataggacggaacaactctaattgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 24210426  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||||| |||||||   ||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  24210425 gacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattt 24210332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 4326002 - 4325790
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||| ||| ||| |||| |||||||  |||||| | |||||||||||||||||  |||||||| | |||| ||||||||||    
T  4326002 gtgcgtttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggagg 4325903  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||| ||| | ||||| || ||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  4325902 caagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 4325803  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  4325802 gtcccccaaaaat 4325790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 29593106 - 29592894
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||| | | || |||||||| |    
T  29593106 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaccttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggatg 29593007  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  |||| || |||||||   |||||||| | || | |||||||||||||||||||||||| || || ||||| |||||||  | ||||| |||||||    
T  29593006 caagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttgtctaaaaatccaaaatggcatttc 29592907  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  29592906 gtcccccaaaaat 29592894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 22318256 - 22318471
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||  ||| ||||  |||||||||||||||||  |||| ||||| |  | ||||||     
T  22318256 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaaactgttttagggacagaacaaactga 22318355  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| ||||  || |||||||||||||| |||||||||| |||||||||||||| |||||| ||||| ||||||| || |||||| |||    
T  22318356 aggcaagagacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacat 22318455  T
Q  208 ttcgtcacccaaaaat 223  Q
    || |||| ||||||||    
T  22318456 tttgtcatccaaaaat 22318471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 6776789 - 6776607
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||| | || ||| |||  | ||| ||||||    
T  6776789 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggagg 6776690  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaa 193  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| |||||||    
T  6776689 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaa 6776607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 53200518 - 53200731
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||| || |||||||| |||   |||||||||||| ||||  ||||||| || | |||||||||||||    
T  53200518 gtgcgtttgatttgttaaaaaatgaaggacaagacataataacttcagctgtttagtgtttgatttgcaaaactgtttcagagacaggataaactggagg 53200617  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaac-tttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||   ||| || |||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| |  ||||||| ||||    
T  53200618 caaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaacatcaaaatagtattt 53200717  T
Q  210 cgtcacccaaaaat 223  Q
    |||| | |||||||    
T  53200718 cgtccctcaaaaat 53200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 11056256 - 11056052
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||| ||||| | ||||||||||||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  11056256 agggtgcgtttgatttgctaaaaaatgaaggtcaggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 11056157  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || ||||||||  ||||||||||||  |||||||||| ||||||||| ||||| | |||||  || || ||||||| |||||| |||    
T  11056156 aggcaagggacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtacagattgtcaaaaataccaaaataacat 11056057  T
Q  208 ttcgt 212  Q
    |||||    
T  11056056 ttcgt 11056052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 21202926 - 21202739
Alignment:
Q  35 aaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaa 134  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||  |||| ||| | | || |||||||||||||  ||||||| |||||||   |    
T  21202926 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcata 21202827  T
Q  135 tttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
     ||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||| ||| |||||||||    
T  21202826 attttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-cccaaaaat 21202739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 42870182 - 42869987
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||  ||||||||||| |||| |||||||  ||||||||||||||||||||||||||  ||||| || | | || ||||||| ||    
T  42870182 gtgcgtttgatttgctaagaaatgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactggggg 42870083  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||||||||||   |||||| ||||| ||||| |||||||||||||||||||||||    
T  42870082 caagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaac---ttgtcccacgtataagttgtctaaaatacaaaaatagcattt 42869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 52319542 - 52319322
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaaca-----acttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataa 102  Q
    ||||||||||||||||| |||| |||||||||||||||||||||     |||  ||||||||  ||||||||||||||||  |||||||| | | || ||    
T  52319542 agggtgcgtttgatttgttaaaaaatgaaggacaggacagaacagaacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaa 52319443  T
Q  103 actggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaat 202  Q
    |||||||||||  |||||||  ||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||   |||||    
T  52319442 actggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatgtcaaaat 52319343  T
Q  203 agcatttcgtcacccaaaaat 223  Q
    | ||||| ||| | |||||||    
T  52319342 aacattttgtccctcaaaaat 52319322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 2629823 - 2630018
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  2629823 agggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaactag 2629922  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    ||||||| |||| || |||||||   ||||||||||||| ||| |||| | ||||||||||||||  ||||||||||| |||||||||| ||||||    
T  2629923 aggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 36743562 - 36743777
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| |  ||| |||||||  |||||| | |||||||| ||||||||  |||||||| | | || ||||||||    
T  36743562 gggtgcgtttgatttgctaaa-aatgaaggatataacaaaacaactctagttgttcagtgtttgaattgtaaaactgtttcaggtacaggacaaactgga 36743660  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  |||| || ||||| |   ||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  36743661 ggcaagggacatgacaaaaattcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatt 36743760  T
Q  209 tcgtcacccaaaaattg 225  Q
    | ||| | |||||||||    
T  36743761 ttgtccctcaaaaattg 36743777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 41712057 - 41711849
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||  |||| |||||| || || |||||||||||  |||||||| ||||||||||||||||   |||||||| | | || |||||| ||||    
T  41712057 tgcgtttgatttactaaaaaatgaatgatagaacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggc 41711958  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| ||| |||   ||||||||||||| ||||||||||| |||||||||||||  ||||||| ||| |||||||||| ||||||||||||||    
T  41711957 aagggacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaatagcatttcg 41711858  T
Q  212 tcacccaaa 220  Q
    || ||||||    
T  41711857 tcccccaaa 41711849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 21580238 - 21580041
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| |||||||||||||||||| |  | |||||| || ||||||||||||||  |||||||| | | || ||| ||||    
T  21580238 gggtgcgtttgatttgctaaaaaat-aaggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttcaggtacaggacaaattgga 21580140  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  |||||||| || |||||||||| ||||||||||    
T  21580139 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattgtctaaaataccaaaatagcat 21580041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 28115462 - 28115261
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||| ||||||||| |||| ||||||| | ||| ||||||||||  |||||||  |||||||||||||||||  ||||  || | | || ||||||||||    
T  28115462 gtgcatttgatttgctaaaaaatgaagcaaagggcagaacaactcaagttgtctagtgtttgatttgtaaaactgtttt-ggtacaagacaaactggagg 28115364  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| ||||| ||  ||||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||||||||||    
T  28115363 caagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcatttc 28115264  T
Q  211 gtc 213  Q
    |||    
T  28115263 gtc 28115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 37865944 - 37865766
Alignment:
Q  31 aatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaact 130  Q
    ||||||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | |||| || ||||||||||  |||| || |||||||    
T  37865944 aatgaaggacacgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaact 37865845  T
Q  131 gcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
       ||||||||||||| ||||| |||| ||||||||||||||| | ||||||||| |||||||||| ||||||||||||    
T  37865844 catatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattt 37865766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 49151976 - 49152157
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| |||||||||||| |||||||||||| |||| ||| |||||| ||||||||||  |||||||| | | || |||||||| ||    
T  49151976 tgcgtttgatttgctaaaaaatgaaggacagaacagaacaactttagttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgc 49152075  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaa 193  Q
    ||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||    
T  49152076 aagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaa 49152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 2787175 - 2786963
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||| |||||||  |||||||  |||||||||||||||||| |||||||| | |  | |||||||| |    
T  2787175 gtgcgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatg 2787076  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   |||||||||| || | |||||||| ||||| ||||||||| |||||||| || |||||||  | |||||| ||||||    
T  2787075 caagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaaatccaaaataacatttc 2786976  T
Q  211 gtcacccaaaaat 223  Q
    ||| |||||||||    
T  2786975 gtcccccaaaaat 2786963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 55065207 - 55065406
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||| ||||| |||| ||| ||||||| ||||||||||||  |||| | | |||||||||||||||||  |||||||| | | || |||||||||    
T  55065207 ggtgcgtttaatttgctaaaaaat-aaggacatgacagaacaactctagttattcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggag 55065305  T
Q  110 g-caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    | |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  55065306 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 55065405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 29616381 - 29616183
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttc-agggatatgataaact 105  Q
    |||||||||||||||||| |||| ||||||||||| || |||||||||  |||||||| |||||||||||||||||  ||||| ||| | | || |||||    
T  29616381 aagggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaaggtacaggacaaact 29616282  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||||||   ||||||||||||      |||||||||||||||||||||| |||||||| || |||||||||| |||||| |    
T  29616281 ggaggcaagggacaggacaaaaactcatatttttgtccct-----gaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaataac 29616187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 6973788 - 6973946
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||  ||||||| |||||||||||||||||  |||||||| |   || |||| |||||    
T  6973788 gtgcgtttgatttgctaaaaaatgaaggacaggatagaacaacttttgttgtccagtgtttgatttgtaaaactgtttcaggtactggacaaacgggagg 6973887  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt 169  Q
    ||| |||||||| |||||||   | |||||||||||||||||||||| |||||||||||    
T  6973888 caattgacaggacaaaaactcataattttgtccctcgccaaaccacaacacaacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 47361287 - 47361482
Alignment:
Q  10 ggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||| | | || |||| |||    
T  47361287 ggtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccgga 47361386  T
Q  109 ggcaaatgacaggataaaaactgca-atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||  |||| || ||||  | || ||||||||||||| |||||||||| |||||||||||||||     ||||||| |||||||||| ||||||||||    
T  47361387 ggcaagggacaagacaaaa--ttcatatttttgtccctcaccaaaccacaacacaactttttgtcc----aacaagttgtctaaaataccaaaatagcat 47361480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 54543198 - 54542989
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||||||| ||| ||||||||||||  |||||| | |||||||||||||||||   ||||| | | | || ||| |||||||    
T  54543198 tgcgtttgatttgctaaaaaatgaag-acatgacagaacaactctagttgttcagtgtttgatttgtaaaactatttcaagtacaggacaaattggaggc 54543100  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   ||||||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||||||| |||||| ||||| |    
T  54543099 aagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaac-ttttgtcccacgtacaagttgtctaaaataccaaaatatcattttg 54543001  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  54543000 tccctcaaaaat 54542989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 25978487 - 25978660
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||| ||||||| |||| |||||||||| || ||| |||||||||||||||||  |||||| ||| |||| ||| ||||||    
T  25978487 gtgcgtttgatttgttaaaaaataaaggacatgacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttca-ggacatgacaaattggagg 25978585  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagtt 185  Q
    |||   |||||| |||||||| |||||||||||||| |||||||| | ||||||||||||||  || ||||||||    
T  25978586 caatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagtt 25978660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 34930078 - 34929914
Alignment:
Q  59 ttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacag 158  Q
    |||||| |||||||||||||||||  |||||||  | |  |||||||||||||||  ||||||| |||||||   |||||||| |||| |||||||||||    
T  34930078 ttgtccagtgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacag 34929979  T
Q  159 cacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||||||| || |  |||||||| |||||||||  |||||||||||| ||| |||||||||    
T  34929978 cacaactttttgccccatatacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 34929914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 43641205 - 43641098
Alignment:
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
    ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| |    
T  43641205 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 43641106  T
Q  216 ccaaaaat 223  Q
     |||||||    
T  43641105 tcaaaaat 43641098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 7554827 - 7555032
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||| |||| | |||| || | |||||||||| ||||| ||||| |||||||||||||||||  |||||| | | |  | |||||    
T  7554827 taagggtgcgtttgatttgctaaaaagtgaaagatatgacagaacaatttcagctgtccagtgtttgatttgtaaaactgtttcatgtacaaaacaaact 7554926  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    | | ||||  |||| ||||||||||   |||||||||| || | |||||| | ||||||||||||||  ||||||||||| |||||||  | ||||||||    
T  7554927 gaatgcaagagacatgataaaaactcgtatttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagc 7555026  T
Q  206 atttcg 211  Q
    ||||||    
T  7555027 atttcg 7555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 37695471 - 37695628
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaact 165  Q
    |||||| ||||| ||||  |||||||| | |||||||| |||||| ||  |||| || ||||||||  |||||||||||||  ||||||||| |||||||    
T  37695471 gtgttttatttggaaaactgtttcaggtacatgataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaact 37695570  T
Q  166 ttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||| ||||||| ||| |||||||||  |||||| ||||||||| |||||||||    
T  37695571 ttttgtcccacgtacaggttgtctaaaatatcaaaataacatttcgtcccccaaaaat 37695628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 42773000 - 42772832
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||||||||||||   |||| |||||| |||| |||| |||||||| |||| ||  |||||||||||||||||| |||||||| | |||| ||||| |||    
T  42773000 ggtgcgtttgattcattaaaaaatgaatgacatgacataacaactttagttttcaagtgtttgatttgtaaaattgtttcaggtacatgacaaacttgag 42772901  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgt 178  Q
    ||||  |||| || |||||||   |||||||||| || |||||||||| ||||||||||||||| ||||    
T  42772900 gcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 14296777 - 14296645
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||| |||||||||||| |||||||  | |||||| |||||||||||||||||| |||||||| ||| || ||||| |||||    
T  14296777 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggc 14296678  T
Q  112 aaatgacaggataaaaactgcaatttttgtccc 144  Q
    ||  ||||||| |||||||   |||||||||||    
T  14296677 aagggacaggacaaaaactcatatttttgtccc 14296645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 14315025 - 14314893
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||| |||||||||||| |||||||  | |||||| |||||||||||||||||| |||||||| ||| || ||||| |||||    
T  14315025 tgcgtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggc 14314926  T
Q  112 aaatgacaggataaaaactgcaatttttgtccc 144  Q
    ||  ||||||| |||||||   |||||||||||    
T  14314925 aagggacaggacaaaaactcatatttttgtccc 14314893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 37932008 - 37931917
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaattg 225  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||||||| | ||||||   |||||||||||||||| |||||||||||    
T  37932008 atttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaaattg 37931917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 30943000 - 30942787
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    |||| |||||||||| |||| ||| ||||| | |||||||||||| ||||| | | ||||||||||| |||||  |||||||||| |  | ||| |||||    
T  30943000 ggtgtgtttgatttgttaaaaaat-aaggataagacagaacaactccagttattcagtgtttgatttataaaactgtttcagggacagaacaaattggag 30942902  T
Q  110 gcaaatgacagga-taaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    ||||  ||| |||  |||||||| ||||| |||| ||| |||||||||| |||||| ||||| |  || || ||||| ||||||| || |||||| ||||    
T  30942901 gcaagagacgggacaaaaaactgaaatttctgtctctcaccaaaccacaacacaacattttgcctcacatataagttgtctaaaacaccaaaatatcatt 30942802  T
Q  209 tcgtcacccaaaaat 223  Q
    || || |||||||||    
T  30942801 tcatcccccaaaaat 30942787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 13110522 - 13110446
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    |||||||| |||||||||| |||| |||||| |||| ||||||| || ||||||||||| |||||||||||||||||    
T  13110522 taagggtgtgtttgatttgctaaaaaatgaaagacatgacagaaaaatttcagttgtccagtgtttgatttgtaaaa 13110446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 23328024 - 23327931
Alignment:
Q  117 acaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttttt-gtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||||| |||||||   |||||||||||||  ||||||||| ||||||||||| |||| ||||||||||| |||||||||| |||||| |||||    
T  23328024 acaggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacattt 23327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 41897338 - 41897426
Alignment:
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||| ||||||   ||||| |||||||||  |||| ||||||||||||||| ||||||||| ||||| | ||||||||||||||||    
T  41897338 gacaggacaaaaacaaaaatttgtgtccctcgataaacaacagcacaactttttatcctacgtaaaagttatataaaatacaaaaatag 41897426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 7001988 - 7001866
Alignment:
Q  86 tttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagtt 185  Q
    |||||| |||| || ||||| |||||||  ||||| | ||||||   |||||||||||||| |||||||||| ||||||||||||| ||| ||| |||||    
T  7001988 tttcagagataagacaaactcgaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagtt 7001889  T
Q  186 ttctaaaatacaaaaatagcattt 209  Q
     ||| |||||| |||||| |||||    
T  7001888 gtct-aaataccaaaataacattt 7001866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 45577680 - 45577783
Alignment:
Q  124 aaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||| || |||| |||| |||||| |||||||| ||||||||||||||| |||| |||||| |||||||||| |||||  ||||| |||  | ||||||    
T  45577680 aaaaaatgaaattcttgttcctcgctaaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaat 45577779  T
Q  224 tgat 227  Q
    ||||    
T  45577780 tgat 45577783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 9948084 - 9947947
Alignment:
Q  67 tgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactt 166  Q
    ||||||||||||||||  |||| ||| | |||| ||||| |||||||  |||| || |||||||  |||| || |||||| | ||||||||  |||||||    
T  9948084 tgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaactaaaattcttatccctcactaaaccacattacaactt 9947985  T
Q  167 tttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||  ||||||||||| |  ||||||| |||||||    
T  9947984 tttgtctcacgtacaagttattcaaaataccaaaatag 9947947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 23328107 - 23328026
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagg 92  Q
    |||||||||||||| |||| ||||||||| | ||||||||||||  |||||||  |||||||| ||||||||  ||||||||    
T  23328107 gtgcgtttgatttgctaaaaaatgaaggatatgacagaacaactctagttgtcatgtgtttgacttgtaaaactgtttcagg 23328026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 44355784 - 44355904
Alignment:
Q  65 ggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaa- 163  Q
    ||||||||||||||||| | |||| ||||||| || |||||||||| ||  || |||| ||||| || ||||||||||||||   |||||||| |||||     
T  44355784 ggtgtttgatttgtaaact-gttttagggataggacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaat 44355882  T
Q  164 ctttttgtcctacgtacaagtt 185  Q
     |||||||| ||||||||||||    
T  44355883 ttttttgtcttacgtacaagtt 44355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 2114249 - 2114194
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtcc 64  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  2114249 gggtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtcc 2114194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 44640533 - 44640463
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    ||||||||||| |  |||| |||||| ||||| ||||||||||||||||||| | |||||||||||||||||    
T  44640533 gtgcgtttgatctactaaaaaatgaatgacag-acagaacaacttcagttgtacagtgtttgatttgtaaaa 44640463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14296654 - 14296596
Alignment:
Q  165 tttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||| ||||||||||| |||||||||| |||||| ||||| ||| |||||||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaat 14296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 14314902 - 14314844
Alignment:
Q  165 tttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||| ||||||||||| |||||||||| |||||| ||||| ||| |||||||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaat 14314844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 20644113 - 20644187
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaa 82  Q
    |||||||||||||| || |||| ||||||||||| ||||| | || ||||||| | |||||||||||||| ||||    
T  20644113 agggtgcgtttgatctgttaaaaaatgaaggacatgacaggataatttcagttatacggtgtttgatttgcaaaa 20644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 38520584 - 38520518
Alignment:
Q  137 tttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    |||||||||| ||||||||||||| || ||||||||| ||| ||||||| | |||||||| ||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaataccaaaata 38520518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 52673932 - 52673830
Alignment:
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    ||||||||| |||  |||| || |||||| | |||||||||||||| | ||||| || ||||| ||||||||  |||||  |||| ||||||||||||||    
T  52673932 aaactggagtcaagggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaa 52673833  T
Q  201 ata 203  Q
    |||    
T  52673832 ata 52673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 13110399 - 13110326
Alignment:
Q  150 aaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||| ||||||| ||||||| ||||| || || |||||||  | |||||||||||||||| |||||||||    
T  13110399 aaaccacaacacaactgtttgtcccacgtaaaatttgtctaaaaatccaaaatagcatttcgtcccccaaaaat 13110326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 56487162 - 56487274
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||| |||| ||||||||||||  ||||     |||||||||||||||||  |||||||  ||| || ||||| ||||    
T  56487162 gtgcgtttgatttgctaaaaaatgaaagacatgacagaacaactctagtt-----gtgtttgatttgtaaaactgtttcagatataggacaaacttgagg 56487256  T
Q  111 caaatgacaggataaaaa 128  Q
    |||  ||||||| |||||    
T  56487257 caagggacaggacaaaaa 56487274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 41720903 - 41720862
Alignment:
Q  162 aactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    |||||||||||| |||||||| || |||||||||||||||||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaata 41720862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 47741352 - 47741287
Alignment:
Q  138 ttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    ||||| |||||  ||||||| ||||||||| ||| || |||||||||| | |||||||||||||||    
T  47741352 ttgtcactcgcttaaccacaacacaactttctgttcttcgtacaagttatttaaaatacaaaaata 47741287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 40792486 - 40792434
Alignment:
Q  153 ccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||| |||||||||||||   | ||||||||| |||||||||||||||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagc 40792434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 1532 - 1733
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| |||||||||||  ||||||||||||||||| ||| |||||||||||||||||  |||||| ||||| || |||||||||||    
T  1532 tgcgtttgatttgttaaaaaatgaaggacaaaacagaacaacttcagttctccagtgtttgatttgtaaaactgtttcaaggataggacaaactggaggc 1631  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  |||| || |||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||||| || ||||||||||||||    
T  1632 aagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatagcatttcg 1731  T
Q  212 tc 213  Q
    ||    
T  1732 tc 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 32092874 - 32093082
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    ||||||||| ||||| ||||||||||| |||||||||||| ||||||| | |||||||||||||||||| |||||||| | | || ||| ||||||||||    
T  32092874 gtttgattttataaaaaatgaaggacaagacagaacaactccagttgtgcagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaa 32092973  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     || |||| |||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||     
T  32092974 ggataggacaaaaactgaaatttttgt-cctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatagcatttcgtcc 32093072  T
Q  215 cccaaaaatt 224  Q
    ||||||||||    
T  32093073 cccaaaaatt 32093082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 2351891 - 2351676
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||  |||||| | |||||||||||||||||  |||| ||| ||| || |||||||    
T  2351891 agggtgcgtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaaactgtttaaggtataggacaaactgg 2351792  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||| |||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    
T  2351791 aggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacat 2351692  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  2351691 tttgtccctcaaaaat 2351676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 11963552 - 11963337
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||    
T  11963552 agggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 11963453  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  11963452 aggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatagcat 11963353  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  11963352 tttgtccctcaaaaat 11963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 4689581 - 4689786
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||| | | || |||||    
T  4689581 taagggttcgtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaact 4689680  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| ||||||    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||  |||||||||||||||| |    
T  4689681 ggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaataac 4689780  T
Q  206 atttcg 211  Q
    ||||||    
T  4689781 atttcg 4689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 3735565 - 3735353
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||| ||||||||| |||||||||||||||||  |||||||| | |||| ||| ||||||    
T  3735565 gtgcgtttgatttgctaaaaaatgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggagg 3735466  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| ||||||||  |||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||     
T  3735465 caatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttt 3735366  T
Q  211 gtcacccaaaaat 223  Q
    |||  ||||||||    
T  3735365 gtcctccaaaaat 3735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 7770161 - 7770367
Alignment:
Q  5 ataagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaac 104  Q
    |||||||||||||||||||| |||| ||||||||||| || |||||||||  |||||||| |||||||||||||||||| |||||||| | | || ||||    
T  7770161 ataagggtgcgtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaac 7770260  T
Q  105 tggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||||||||  ||||||| ||||||    |||||||||| || |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||     
T  7770261 tggaggcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataa 7770360  T
Q  205 catttcg 211  Q
    |||||||    
T  7770361 catttcg 7770367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 18470312 - 18470527
Alignment:
Q  7 aagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||||| ||||| ||| |||||||||||||||||  |||||||||| |  | ||||||    
T  18470312 aagggtgcttttgatttgttaaaaaatgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactg 18470411  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
     ||||||  |||| || |||||||| |||||||||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||| || |||||| ||    
T  18470412 aaggcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataaca 18470511  T
Q  207 tttcgtcacccaaaaa 222  Q
    ||||||| ||||||||    
T  18470512 tttcgtcccccaaaaa 18470527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 39918717 - 39918503
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||  |||||||| |||||||||||||||||  |||||||  | | || ||||||||    
T  39918717 gggtgcgtttgatttgctaaaaaatgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactgga 39918618  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| |||||| ||||    
T  39918617 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacatt 39918518  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| |||||||||    
T  39918517 ttgtcccccaaaaat 39918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 7523376 - 7523168
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||| |||||||||||| |  |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||     
T  7523376 gtttgatttgctaaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 7523277  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||     
T  7523276 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 7523177  T
Q  215 cccaaaaat 223  Q
    | |||||||    
T  7523176 ctcaaaaat 7523168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 8137048 - 8136848
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||  |||||||| ||||||| |||||||||  |||||||  | | || |||||||    
T  8137048 agggtgcgtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactgg 8136949  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||| |||    
T  8136948 aggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaataacat 8136849  T
Q  208 t 208  Q
    |    
T  8136848 t 8136848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 31879961 - 31880172
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| || | |||||||  |||||| | |||||||||| ||||||  |||||||| | | || |||||||    
T  31879961 agggtgcgtttgatttgctaaaaaatgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactgg 31880060  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    |||||| |||||||| |||||||   ||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  31880061 aggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatagcat 31880160  T
Q  208 ttcgtcacccaa 219  Q
    || ||| |||||    
T  31880161 tttgtcccccaa 31880172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 24181512 - 24181721
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| |||| |||||||  |||||||| |||||||||||||||||  |||||||| | | || |||||||||     
T  24181512 gtgcgtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagc 24181611  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| ||||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||     
T  24181612 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcatttt 24181711  T
Q  211 gtcacccaaa 220  Q
    ||| ||||||    
T  24181712 gtcccccaaa 24181721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 29241587 - 29241374
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||  |||||||| |||||||||||||||||  |||||||| | |||| ||| |||||    
T  29241587 ggtgcgtttgatttgctaaaaaatgaaggccaggccagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggag 29241488  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  ||||||  |||| ||   |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||||    
T  29241487 gcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcattt 29241388  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  29241387 tgtccctcaaaaat 29241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 32528923 - 32528711
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||| ||||| ||||||  |||||| | |||||||||||||||||  |||||||| | | || |||||||||     
T  32528923 gtgcgtttgatttgctaaaaaatgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaga 32528824  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||     
T  32528823 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 32528724  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  32528723 gtccctcaaaaat 32528711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 35701488 - 35701273
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| || |||||||||  |||||||| |||||||||||||||||  ||||| || | | || |||||||    
T  35701488 agggtgcgtttgatttgctaaaaaatgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactgg 35701389  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| || |||||||||| | ||||||||||| |||||||||| ||||||||||    
T  35701388 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcat 35701289  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  35701288 tttgtccctcaaaaat 35701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 39788401 - 39788203
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||| |||||||||||||||||| |  |||||||| || ||||||||||||||  |||||||| | | || |||||| |||    
T  39788401 gtgcgtttgatttgttaaaaaataaaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactgtagg 39788302  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||| ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  39788301 caaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacattt 39788203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 7208115 - 7208316
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||  |||||||| |   || |||||||    
T  7208115 agggtgcatttgatttgctaaaaaatgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacgggacaaactgg 7208214  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    | ||||  ||||| |  ||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||    
T  7208215 atgcaagagacagaaccaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcat 7208314  T
Q  208 tt 209  Q
    ||    
T  7208315 tt 7208316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 34795098 - 34794897
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||  | ||||||||||||||  |||||||| | | || ||||| |    
T  34795098 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactag 34794999  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| |||||||||| ||||||||||    
T  34794998 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcat 34794899  T
Q  208 tt 209  Q
    ||    
T  34794898 tt 34794897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 22493321 - 22493505
Alignment:
Q  25 ataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggata 124  Q
    ||||| ||||||||||||||||||||||||  |||||||| |||||| ||||||||||  |||||||| | | |||||||||||| |||| |||| || |    
T  22493321 ataaaaaatgaaggacaggacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggacaagaca 22493420  T
Q  125 aaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||||   ||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||  ||||||||||||    
T  22493421 aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaatatcaaaatagcattt 22493505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 31644657 - 31644442
Alignment:
Q  8 agggtgcgtttgatttgat-aaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactg 106  Q
    ||||||||||||||||| | ||| |||||||||| |||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||||    
T  31644657 agggtgcgtttgatttgcttaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactg 31644558  T
Q  107 gaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagca 206  Q
    |||||||  | || || ||| |||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  31644557 gaggcaagag-caagacaaatactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 31644459  T
Q  207 tttcgtcacccaaaaat 223  Q
    ||| ||| || ||||||    
T  31644458 ttttgtcccctaaaaat 31644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 27838959 - 27839173
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||||| | |||| ||||||     
T  27838959 agggtgcgtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactga 27839058  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||||||| |||||   |||||||||||||| |||||||| |  |||||||||||||  | ||||||||| |||||||||| |||||||| |    
T  27839059 aggcaatggacaggat-aaaacataaatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaatagcct 27839157  T
Q  208 ttcgtcacccaaaaat 223  Q
    || |||  ||||||||    
T  27839158 tttgtcctccaaaaat 27839173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 225
Target Start/End: Original strand, 21739095 - 21739263
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccac 156  Q
    |||||||| |||||||||||||||||  |||||||| | | || |||||||||||||  ||||||| |||||||   ||||||||||||| |||||||||    
T  21739095 agttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 21739194  T
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaattg 225  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||||    
T  21739195 agcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattg 21739263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 40489546 - 40489331
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||| ||||||||||||||| ||||  | |||| | |||||||||||||||||  |||||||| | | || ||||||||    
T  40489546 gggtgcgtttgatttgctaaaaaat-aaggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttcaggtagaagacaaactgga 40489448  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
    |||||  ||| ||| |||||||   ||||||||||||| ||||| |||||||||||||||||||| || |||||||| |||||||||| |||||| ||||    
T  40489447 ggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataacatt 40489348  T
Q  209 tcgtcacccaaaaattg 225  Q
    | ||| | |||||||||    
T  40489347 ttgtccctcaaaaattg 40489331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 31770480 - 31770691
Alignment:
Q  12 tgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggc 111  Q
    ||||||||||||| |||| ||| ||||||| |||| |||||||  |||||| | |||||||||||||||||  |||||| | | | || |||||||||||    
T  31770480 tgcgtttgatttgctaaaaaataaaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggc 31770579  T
Q  112 aaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||  ||||||| |||||||   |||||| |||||| |||||||||| ||||||||||||||| ||||||||||| ||| |||||| |||||||||||| |    
T  31770580 aagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttg 31770679  T
Q  212 tcacccaaaaat 223  Q
    || | |||||||    
T  31770680 tccctcaaaaat 31770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 41459799 - 41459585
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||  ||||||   || ||||||||||||||  |||||||| | | || |||||||    
T  41459799 agggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaactgg 41459700  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||  |||||| |||    
T  41459699 aggcaagggacaaga-aaaaactcatatttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaatatcaaaataacat 41459601  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| | |||||||    
T  41459600 tttgtccctcaaaaat 41459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 41790356 - 41790562
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||| | |||| |||||| ||||||||||||||| || |||||||| |||||||||||||||||  |||||||  | | || |||||||||||||      
T  41790356 tttgattcgctaaaaaatgaaagacaggacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcagt-acaggacaaactggaggcaata 41790454  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
     |||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||  |||||||| || |||||||||| |||||| ||||| ||| |    
T  41790455 aacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtccc 41790554  T
Q  216 ccaaaaat 223  Q
    ||||||||    
T  41790555 ccaaaaat 41790562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 6284188 - 6284399
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||||||| |||  ||| ||||| |||||||| |||||||||||||||||  | |||||| | | || ||||||||||    
T  6284188 gtgcgtttgatttgttaaaaaatgaaggacggga--gaataactttagttgtccagtgtttgatttgtaaaactgcttcaggtacaggacaaactggagg 6284285  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaata-caaaaatagcattt 209  Q
    ||   ||||||| |||||||    |||||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  6284286 catgggacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattt 6284385  T
Q  210 cgtcacccaaaaat 223  Q
     ||| | |||||||    
T  6284386 tgtccctcaaaaat 6284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 8560868 - 8561081
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| || |||||||  |||| ||||||||||||| | | |||||||||||||||||  |||||||  | | || |||||| |    
T  8560868 gggtgcgtttgatttgctaaaaaacgaaggacgtgacataacaacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaactgaa 8560967  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     ||||| |||| || ||||||||  |||||||| |||| |||||||||| ||||||||||||| | | ||||||||| |||||||||| |||||| ||||    
T  8560968 agcaaaggacaagacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacatt 8561067  T
Q  209 tcgtcacccaaaaat 223  Q
    ||||| |||||||||    
T  8561068 tcgtc-cccaaaaat 8561081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 22432243 - 22432409
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccac 156  Q
    ||||||||  ||||||||||||||||  ||||||||   | ||||||||||||||||  ||||||| ||||||||  |||||||||||||  ||||||||    
T  22432243 agttgtcctatgtttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccac 22432342  T
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | ||||| ||||||||  | ||||||||| |||||||||| |||||||||||||||| |||||||||    
T  22432343 aacacaattttttgtctcaagtacaagttgtctaaaataccaaaatagcatttcgtcccccaaaaat 22432409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 553601 - 553394
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||| | | ||||||||||||| | |||||  ||||||||||| |||||  |||||| | | | || |||||||||||||     
T  553601 gtttgatttgctaaaaaatgaagaatatgacagaacaactttaattgtctagtgtttgatttataaaactgtttcaagtacaggacaaactggaggcaag 553502  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     |||| || |||||||   ||||||||| ||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||| ||||| |||     
T  553501 agacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 553402  T
Q  215 cccaaaaa 222  Q
    ||| ||||    
T  553401 ccccaaaa 553394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 7725702 - 7725909
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| ||| |||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||   |  | |||||||| ||||      
T  7725702 tttgatttgctaaaaaattaaggacaggacaaaacaacttcagttgtccagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagg 7725801  T
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
    |||| || |||||||   |||||||||| ||   |||||||| ||||||||||||||| ||||| ||||| ||||||   | |||||||||||||||| |    
T  7725802 gacatgacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaatatccaaaatagcatttcgtccc 7725901  T
Q  216 ccaaaaat 223  Q
    ||||||||    
T  7725902 ccaaaaat 7725909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 24036442 - 24036240
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||| ||||||||||||| |||| ||||||| |||||||| ||||| |  |||||||| |||||||||||| ||||  |||||||| | |  | ||| |    
T  24036442 taaggatgcgtttgatttgctaaaaaatgaag-acaggacaaaacaattcaagttgtccagtgtttgatttggaaaactgtttcaggtacagcacaaatt 24036344  T
Q  106 ggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||||  ||||||| |||| ||   ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||| |    
T  24036343 ggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaataac 24036244  T
Q  206 attt 209  Q
    ||||    
T  24036243 attt 24036240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 5598688 - 5598486
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||| |||| |||||||||||  ||||||||  ||||||||||||||||  |||||||| |   || ||||||||||    
T  5598688 gtgcgtttgatttgctaaaaaatgaagcacagaacagaacaactcaagttgtccaatgtttgatttgtaaaactgtttcaggtacgagacaaactggagg 5598589  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  || |||| |||||| |  |||||||||| ||  ||||| ||||||||||||||||||  |||||||| || |||||||||  |||||| ||||||    
T  5598588 caagggagaggacaaaaacagatatttttgtccttcatcaaacaacagcacaactttttgtctcacgtacaacttgtctaaaatatcaaaataacatttc 5598489  T
Q  211 gtc 213  Q
    |||    
T  5598488 gtc 5598486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 4818085 - 4818226
Alignment:
Q  68 gtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaacttt 167  Q
    |||||||||||||||  |||||||| | | || |||||||||||||   ||| || |||||||   ||||||||||||| ||||||||||||||||||||    
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaacttt 4818184  T
Q  168 ttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    |||||| ||||||||||| |||||||||| ||||||||||||    
T  4818185 ttgtcccacgtacaagttgtctaaaataccaaaatagcattt 4818226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 37148475 - 37148631
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    |||||||||||||||| |||| ||||||||| | |||||||||||| ||||||||   ||||||||||||||||  |||||||||| |  | ||||||||    
T  37148475 gggtgcgtttgatttgttaaaaaatgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttcagggacagaacaaactgga 37148574  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaact 165  Q
    |||||  ||| ||| |||||||| ||||||||| |||| ||||||||| ||||||||    
T  37148575 ggcaagggacgggacaaaaactgaaatttttgttcctcaccaaaccacggcacaact 37148631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 28090463 - 28090620
Alignment:
Q  66 gtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaact 165  Q
    |||||||||||||||||  |||||||| | | |  |||||||||||||  |||| || |||||||   ||||||||||||| |||||| ||| |||||||    
T  28090463 gtgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaact 28090562  T
Q  166 ttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||| ||| | |||||||    
T  28090563 ttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtccctcaaaaat 28090620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 23091192 - 23091404
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| |||||| |||| || | ||| |||  |||||||| |||||||||||||||||  |||||||| | | |||||||||||||    
T  23091192 gtgcgtttgatttgctaaaaaatgaatgacaagatataactactcaagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggagg 23091291  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttc 210  Q
    |||  |||| || |||||||   |||||||||| ||  ||||||||| ||||||||||||||  ||||| || || |||||||||  |||||| |||||     
T  23091292 caagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaatatcaaaataacatttt 23091391  T
Q  211 gtcacccaaaaat 223  Q
    ||| | |||||||    
T  23091392 gtccctcaaaaat 23091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 4665044 - 4664937
Alignment:
Q  6 taagggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaact 105  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||| ||||| ||| ||||||||||||||||| ||||||||||| | || ||||     
T  4665044 taagggtgcgtttgatttgattaaaaatgaaggacatgacagaacaactccagttatccagtgtttgatttgtaaaacagtttcagggacaggacaaaca 4664945  T
Q  106 ggaggcaa 113  Q
    ||||||||    
T  4664944 ggaggcaa 4664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 208
Target Start/End: Original strand, 5571622 - 5571729
Alignment:
Q  101 aaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaa 200  Q
    |||||||||||||  ||||||| ||||| |   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||    
T  5571622 aaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaa 5571721  T
Q  201 atagcatt 208  Q
    ||||||||    
T  5571722 atagcatt 5571729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 205
Target Start/End: Complemental strand, 17031368 - 17031171
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||||||  | |||| ||||||||||| ||||  |||||| || ||||    ||||||||||||||||  |||||||||| |  | ||| |||    
T  17031368 agggtgcttttgatccgttaaaaaatgaaggacaagacaacacaactccacttgtataatgtttgatttgtaaaactgtttcagggacagtacaaattgg 17031269  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagc 205  Q
    ||||||| ||||||| ||||||   |||||||| |||||   ||| ||||||||||||||| |||| ||||||||||| | |||||||||||||||||    
T  17031268 aggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagttatttaaaatacaaaaatagc 17031171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 40182549 - 40182460
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    ||||||||||||| |||||||||| ||||||||||||||| | ||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaat 40182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 700612 - 700681
Alignment:
Q  134 atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaata 203  Q
    |||||||| |||| |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||    
T  700612 atttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaata 700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 5673260 - 5673178
Alignment:
Q  98 gataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtac 180  Q
    ||||||||||||||||  |||| |  |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  5673260 gataaactggaggcaagggacaagtcaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac 5673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 5571543 - 5571609
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatt 75  Q
    |||||||||||||||| |||| |||||||||||  ||| |||||||  |||||||| ||||||||||    
T  5571543 gggtgcgtttgatttgctaaaaaatgaaggacaaaacaaaacaactctagttgtccagtgtttgatt 5571609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 21739016 - 21739053
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggaca 46  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21739016 gggtgcgtttgatttgctaaaaaatgaaggacaggaca 21739053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 40182596 - 40182552
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaactt 55  Q
    |||||||||||||| |||| ||||||||| | |||||||||||||    
T  40182596 gtgcgtttgatttgctaaaaaatgaaggaaatgacagaacaactt 40182552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 2224 - 2419
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||| |||| || | ||||||||||||||||  |||||||| | | || ||| |||    
T  2224 agggtgcgtttgatttgctaaaaaatgaaggacaggatagaacaactttagttttcag-tgtttgatttgtaaaactgtttcaggtacaggacaaattgg 2322  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    ||||||  ||||||| |||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  2323 aggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatag 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 23786 - 23586
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||  |||||||| |||||||||||||||||  |||||||| | | || ||||| |    
T  23786 agggtgcgtttgatttgctaaaaaatgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttg 23687  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   |||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    
T  23686 aggcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacat 23587  T
Q  208 t 208  Q
    |    
T  23586 t 23586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 5332 - 5528
Alignment:
Q  16 tttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaat 115  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||| | | || |||||||||||||      
T  5332 tttgatttgctaaaaaatgaaggacagaacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 5431  T
Q  116 gacaggataaaaactgca-atttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcg 211  Q
    ||||||| |||||   || ||||||||||||| |||||||||| ||||||||||||||| || ||||||||  |||||||||||||||| |||||||    
T  5432 gacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaataacatttcg 5528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 15383 - 15168
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||  | |||||| |||||||||||||||||  |||||||| | | || |||||||    
T  15383 agggtgcgtttgatttgctaaaaaatgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 15284  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  |||| || |||||||   ||||||||||| | |||||||||| ||||||||||||||  ||||||||||| |||||||||| ||||||| ||    
T  15283 aggcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtat 15184  T
Q  208 ttcgtcacccaaaaat 223  Q
    || ||| |||||||||    
T  15183 tttgtcccccaaaaat 15168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 102158 - 101959
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||  |||| ||| |||||||||||||||||  |||||| | | | || ||  |||||    
T  102158 ggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaactgtttcatgtacaggacaacttggag 102059  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    ||||  |||| || |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  102058 gcaacggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 101959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 4467 - 4649
Alignment:
Q  11 gtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggagg 110  Q
    |||||||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||| | || ||| |||  | ||| ||||||    
T  4467 gtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggagg 4566  T
Q  111 caaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaa 193  Q
    |||  ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| |||||||    
T  4567 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaa 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 51648 - 51435
Alignment:
Q  9 gggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgga 108  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| | |||||| |||||||||||||||||  ||||||||   |  | ||||||||    
T  51648 gggtgcgtttgatttgataaaaaatgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaaactgtttcaggtgcagaacaaactgga 51549  T
Q  109 ggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatt 208  Q
     ||||  |||| || |||||||   |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  51548 tgcaagggacaagacaaaaactcatatttttgtccctc-acaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcatt 51450  T
Q  209 tcgtcacccaaaaat 223  Q
    | ||| | |||||||    
T  51449 ttgtccctcaaaaat 51435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 17988 - 18154
Alignment:
Q  57 agttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccac 156  Q
    |||||||| |||||||||||||||||  |||||||| | |||| ||| |||||||||  ||||||| |||||||   ||||||||||||| |||||||||    
T  17988 agttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccac 18087  T
Q  157 agcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcacccaaaaat 223  Q
    | ||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||||||    
T  18088 aacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 18154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 12529 - 12636
Alignment:
Q  116 gacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtcac 215  Q
    ||||||| |||||||   ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||| |    
T  12529 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 12628  T
Q  216 ccaaaaat 223  Q
     |||||||    
T  12629 tcaaaaat 12636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 18977 - 19176
Alignment:
Q  8 agggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||| |  | |||||| |||||||||||||||||  ||| |||| | | || |||||||    
T  18977 agggtgcctttaatttgctaaaaaatgaaggacaggacagaacaattatatttgtccagtgtttgatttgtaaaactgtt-caggtacaggacaaactgg 19075  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
    ||||||  ||||||| |||| ||   ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    
T  19076 aggcaagagacaggacaaaa-ctcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacat 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 42843 - 43033
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||||||||| |||| ||||||||| | |||||||||||| || | |||| |||||||||||||||||  |||||||||| |  | |||||||||||||     
T  42843 gtttgatttgttaaaaaatgaaggataagacagaacaactcca-tagtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 42941  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcat 207  Q
     ||||| | |||||||| ||||| |||||||| |||||||||| ||||||||||||||| |||||||| || ||||||| || ||||||||||    
T  42942 ggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa-ttgtctaaaacaccaaaatagcat 43033  T

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Target: scaffold0360 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 210
Target Start/End: Original strand, 15260 - 15468
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| ||||||| ||| || |||||||||  |||||| | |||||||||||||||||  |||||||| | | ||||||||||||    
T  15260 ggtgcgtttgatttgctaaaaaatgaagaacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggataaactggag 15359  T
Q  110 gcaaatgacaggat--------aaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaa 201  Q
    ||||  |||| |||        |||||||   ||||||||||||| |||||||||| ||||||||||||||| | ||||||||| |||||||||| ||||    
T  15360 gcaagggacaagatcacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaa 15459  T
Q  202 tagcatttc 210  Q
    |||||||||    
T  15460 tagcatttc 15468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 2383 - 2595
Alignment:
Q  10 ggtgcgtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggag 109  Q
    ||||||||||||||| |||| | ||||||||| |||| |||||||  |||||| | |||||||||||||||||  |||||||| | | || ||| |||||    
T  2383 ggtgcgtttgatttgctaaaaattgaaggacaagacataacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggag 2482  T
Q  110 gcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcattt 209  Q
    | ||  ||||||| |||||||   || |||||||||  |||||||||| |||||| | |||||  ||||||||||| |||||||||| ||||||||||||    
T  2483 gaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaac-tattgtctcacgtacaagttgtctaaaataccaaaatagcattt 2581  T
Q  210 cgtcacccaaaaat 223  Q
     ||| |||||||||    
T  2582 tgtcccccaaaaat 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 19041 - 19205
Alignment:
Q  9 gggtgcgtttgatttgataaagaa-tgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactgg 107  Q
    |||||||||||||||| |||| || ||||||| |||||| ||||| | ||||| ||| |||||||||||||||||  |||||||||| |  |||||| ||    
T  19041 gggtgcgtttgatttgttaaaaaaatgaaggataggacataacaattccagttatccagtgtttgatttgtaaaactgtttcagggacagaataaacagg 19140  T
Q  108 aggcaaatgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtc 172  Q
    ||||||  ||||||| |||||||| ||||||||||||||  |||| | || ||||||||||||||    
T  19141 aggcaatggacaggacaaaaactgaaatttttgtccctcatcaaagctcaacacaactttttgtc 19205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 372856 - 373064
Alignment:
Q  15 gtttgatttgataaagaatgaaggacaggacagaacaacttcagttgtccggtgtttgatttgtaaaatagtttcagggatatgataaactggaggcaaa 114  Q
    |||| ||||| |||| ||||||||| | |||||||||| || |||||||   ||||||||||||||||  |||||||| | |  | ||||||||| |||     
T  372856 gttttatttgctaaaaaatgaaggatatgacagaacaattttagttgtcaaatgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaag 372955  T
Q  115 tgacaggataaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatagcatttcgtca 214  Q
     || | || |||||||   ||||||||||||| |||||||| | ||||||||||||||| ||||||||||| |||||||||| |||||| ||||| |||     
T  372956 ggatatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtcc 373055  T
Q  215 cccaaaaat 223  Q
    | |||||||    
T  373056 ctcaaaaat 373064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 33554 - 33625
Alignment:
Q  133 aatttttgtccctcgccaaaccacagcacaactttttgtcctacgtacaagttttctaaaatacaaaaatag 204  Q
    |||| |||||||||  ||||||||| ||||||||||||||| |||||||| || | |||||||| |||||||    
T  33554 aattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaatag 33625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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