View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9123_low_10 (Length: 350)

Name: NF9123_low_10
Description: NF9123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9123_low_10
NF9123_low_10
[»] chr4 (21 HSPs)
chr4 (16-334)||(1746978-1747296)
chr4 (245-330)||(35723373-35723457)
chr4 (18-206)||(6005818-6006005)
chr4 (251-295)||(40613443-40613487)
chr4 (256-295)||(8423740-8423779)
chr4 (237-295)||(20743300-20743358)
chr4 (245-295)||(36635311-36635361)
chr4 (251-295)||(7012059-7012103)
chr4 (251-329)||(22234880-22234957)
chr4 (251-295)||(23293008-23293052)
chr4 (257-328)||(38148716-38148785)
chr4 (276-334)||(44132629-44132685)
chr4 (245-295)||(903909-903959)
chr4 (257-295)||(22440622-22440660)
chr4 (256-293)||(23861455-23861492)
chr4 (259-300)||(30522932-30522973)
chr4 (259-295)||(16189710-16189746)
chr4 (245-281)||(17345451-17345487)
chr4 (245-293)||(20521873-20521921)
chr4 (251-295)||(24343500-24343544)
chr4 (261-293)||(34200295-34200327)
[»] chr7 (30 HSPs)
chr7 (245-328)||(32308107-32308188)
chr7 (251-329)||(19206043-19206119)
chr7 (251-295)||(29787391-29787435)
chr7 (252-329)||(30731031-30731104)
chr7 (245-330)||(6630901-6630984)
chr7 (245-294)||(11722121-11722170)
chr7 (255-322)||(5548673-5548738)
chr7 (245-319)||(20549778-20549850)
chr7 (245-315)||(22868029-22868097)
chr7 (253-295)||(23191891-23191933)
chr7 (245-295)||(26733291-26733341)
chr7 (245-295)||(27945028-27945078)
chr7 (246-322)||(22602707-22602781)
chr7 (251-292)||(28155563-28155604)
chr7 (251-338)||(23128642-23128727)
chr7 (251-295)||(24289813-24289857)
chr7 (251-295)||(24339635-24339679)
chr7 (251-295)||(25481895-25481939)
chr7 (245-291)||(10042924-10042970)
chr7 (245-322)||(21828402-21828477)
chr7 (245-295)||(22484012-22484062)
chr7 (257-295)||(32287485-32287523)
chr7 (266-335)||(35297656-35297723)
chr7 (245-290)||(25791640-25791685)
chr7 (245-329)||(26329372-26329454)
chr7 (244-293)||(35861950-35861999)
chr7 (251-287)||(1433447-1433483)
chr7 (263-295)||(2424619-2424651)
chr7 (251-291)||(2425759-2425799)
chr7 (251-291)||(5307253-5307293)
[»] chr8 (22 HSPs)
chr8 (251-329)||(24362192-24362268)
chr8 (253-329)||(11927076-11927150)
chr8 (251-295)||(34897078-34897122)
chr8 (251-291)||(39954305-39954345)
chr8 (245-319)||(31109518-31109590)
chr8 (245-330)||(15816118-15816201)
chr8 (251-293)||(31236601-31236643)
chr8 (251-319)||(13844596-13844662)
chr8 (258-295)||(18067956-18067993)
chr8 (245-293)||(13436988-13437036)
chr8 (245-293)||(22651963-22652011)
chr8 (251-291)||(27101508-27101548)
chr8 (227-295)||(30271313-30271381)
chr8 (256-295)||(4611532-4611571)
chr8 (245-319)||(4786338-4786410)
chr8 (251-329)||(11944658-11944734)
chr8 (253-295)||(7658458-7658500)
chr8 (251-293)||(27213540-27213582)
chr8 (245-295)||(29510326-29510376)
chr8 (264-319)||(3025557-3025610)
chr8 (258-329)||(25566841-25566910)
chr8 (245-293)||(36934657-36934705)
[»] chr6 (35 HSPs)
chr6 (243-330)||(10339114-10339200)
chr6 (242-319)||(19040336-19040411)
chr6 (242-334)||(26562673-26562763)
chr6 (245-319)||(7265593-7265665)
chr6 (245-322)||(9027165-9027240)
chr6 (245-295)||(9658866-9658916)
chr6 (251-329)||(5000616-5000692)
chr6 (240-294)||(7801179-7801233)
chr6 (251-293)||(9629376-9629418)
chr6 (245-295)||(16766684-16766734)
chr6 (251-289)||(20371138-20371176)
chr6 (258-322)||(9025491-9025553)
chr6 (246-295)||(17341686-17341735)
chr6 (251-291)||(10842525-10842565)
chr6 (245-288)||(5732539-5732582)
chr6 (251-329)||(8931592-8931668)
chr6 (251-293)||(7377972-7378014)
chr6 (245-295)||(7996400-7996450)
chr6 (245-295)||(8022351-8022401)
chr6 (245-295)||(9107392-9107442)
chr6 (245-295)||(12696311-12696361)
chr6 (245-295)||(13851723-13851773)
chr6 (245-291)||(17841615-17841661)
chr6 (245-295)||(19044451-19044501)
chr6 (259-293)||(30866168-30866202)
chr6 (253-294)||(6665208-6665249)
chr6 (242-295)||(13360394-13360447)
chr6 (242-295)||(31959143-31959196)
chr6 (258-295)||(32511688-32511725)
chr6 (245-329)||(34073337-34073419)
chr6 (251-295)||(7977852-7977896)
chr6 (255-330)||(10294104-10294177)
chr6 (259-295)||(31579247-31579283)
chr6 (251-291)||(33001315-33001355)
chr6 (251-295)||(34595127-34595171)
[»] chr1 (45 HSPs)
chr1 (245-295)||(2896143-2896193)
chr1 (253-330)||(25361881-25361956)
chr1 (245-295)||(36878448-36878498)
chr1 (258-330)||(34371714-34371783)
chr1 (251-322)||(9828037-9828106)
chr1 (251-295)||(10474999-10475043)
chr1 (243-329)||(10572579-10572663)
chr1 (245-295)||(398787-398837)
chr1 (245-295)||(17831553-17831603)
chr1 (245-293)||(6427337-6427385)
chr1 (251-322)||(7918208-7918277)
chr1 (251-295)||(12443482-12443526)
chr1 (242-293)||(1262868-1262919)
chr1 (245-295)||(5376522-5376572)
chr1 (245-299)||(6415019-6415073)
chr1 (251-328)||(17754304-17754379)
chr1 (244-293)||(609482-609531)
chr1 (242-295)||(19562643-19562696)
chr1 (262-330)||(44482234-44482300)
chr1 (251-295)||(113292-113336)
chr1 (259-295)||(10233254-10233290)
chr1 (255-295)||(25098577-25098617)
chr1 (251-295)||(34298429-34298473)
chr1 (245-292)||(9709807-9709854)
chr1 (256-295)||(26238134-26238173)
chr1 (244-295)||(27471588-27471639)
chr1 (242-293)||(38078685-38078736)
chr1 (253-319)||(39953146-39953210)
chr1 (253-295)||(5898288-5898330)
chr1 (245-299)||(9103627-9103681)
chr1 (257-295)||(20157372-20157410)
chr1 (245-295)||(38503307-38503357)
chr1 (245-295)||(40285676-40285726)
chr1 (253-291)||(41877496-41877534)
chr1 (245-286)||(9690303-9690344)
chr1 (251-319)||(29163381-29163447)
chr1 (254-295)||(31015039-31015080)
chr1 (245-294)||(36905984-36906033)
chr1 (258-295)||(40181871-40181908)
chr1 (251-295)||(1486731-1486775)
chr1 (251-295)||(13436451-13436495)
chr1 (259-295)||(19909298-19909334)
chr1 (251-295)||(21378571-21378615)
chr1 (251-291)||(21530682-21530722)
chr1 (251-322)||(34712380-34712449)
[»] chr2 (22 HSPs)
chr2 (251-295)||(21616755-21616799)
chr2 (244-295)||(21782840-21782891)
chr2 (258-328)||(44860320-44860388)
chr2 (245-290)||(31284035-31284080)
chr2 (255-295)||(37411266-37411306)
chr2 (257-295)||(18889613-18889651)
chr2 (245-295)||(23718013-23718063)
chr2 (245-295)||(24105685-24105735)
chr2 (253-295)||(28677904-28677946)
chr2 (227-295)||(24894357-24894426)
chr2 (245-317)||(31808064-31808134)
chr2 (255-295)||(18276518-18276558)
chr2 (253-295)||(10535781-10535823)
chr2 (251-293)||(18420458-18420500)
chr2 (245-295)||(21374721-21374771)
chr2 (245-295)||(30404872-30404922)
chr2 (255-329)||(36409619-36409689)
chr2 (245-293)||(896198-896246)
chr2 (251-295)||(19573971-19574015)
chr2 (244-300)||(35447904-35447960)
chr2 (245-293)||(37558964-37559012)
chr2 (251-295)||(42832298-42832342)
[»] chr5 (29 HSPs)
chr5 (236-322)||(3966481-3966565)
chr5 (227-293)||(30098295-30098361)
chr5 (217-293)||(19737506-19737582)
chr5 (251-295)||(28588696-28588740)
chr5 (252-295)||(27932229-27932272)
chr5 (245-291)||(27144450-27144496)
chr5 (245-330)||(39698528-39698611)
chr5 (245-290)||(17123035-17123080)
chr5 (245-293)||(31084310-31084358)
chr5 (245-292)||(2436909-2436956)
chr5 (245-295)||(6247609-6247659)
chr5 (245-295)||(6326319-6326369)
chr5 (245-291)||(14674256-14674302)
chr5 (253-291)||(19579696-19579734)
chr5 (245-295)||(21191078-21191128)
chr5 (258-295)||(6471911-6471948)
chr5 (252-293)||(9449463-9449504)
chr5 (242-295)||(21576767-21576820)
chr5 (255-292)||(26716141-26716178)
chr5 (255-292)||(26985881-26985918)
chr5 (259-319)||(30502388-30502446)
chr5 (259-319)||(30542731-30542789)
chr5 (256-332)||(32766930-32767004)
chr5 (259-323)||(36838544-36838606)
chr5 (251-336)||(38816679-38816761)
chr5 (243-295)||(4344727-4344779)
chr5 (245-320)||(11685926-11685999)
chr5 (251-295)||(34879343-34879387)
chr5 (251-291)||(35017030-35017070)
[»] chr3 (38 HSPs)
chr3 (251-337)||(8039817-8039901)
chr3 (243-295)||(4987313-4987365)
chr3 (251-295)||(8383250-8383294)
chr3 (245-320)||(26290358-26290431)
chr3 (224-299)||(8412963-8413038)
chr3 (251-293)||(5407271-5407313)
chr3 (246-295)||(10690284-10690333)
chr3 (242-295)||(10954936-10954989)
chr3 (251-319)||(49505154-49505220)
chr3 (245-293)||(5441055-5441103)
chr3 (256-319)||(7928448-7928509)
chr3 (251-295)||(12704000-12704044)
chr3 (251-295)||(34307802-34307846)
chr3 (245-293)||(40052319-40052367)
chr3 (245-300)||(2620070-2620125)
chr3 (245-292)||(9800027-9800074)
chr3 (256-322)||(11313797-11313861)
chr3 (252-295)||(14979175-14979218)
chr3 (245-295)||(1438791-1438841)
chr3 (245-295)||(21479105-21479155)
chr3 (245-295)||(21720751-21720801)
chr3 (251-330)||(25064902-25064977)
chr3 (255-292)||(24633763-24633800)
chr3 (245-329)||(28678290-28678372)
chr3 (242-295)||(32429402-32429455)
chr3 (251-295)||(4990989-4991033)
chr3 (251-295)||(11493383-11493427)
chr3 (251-295)||(11610514-11610558)
chr3 (245-324)||(11665931-11666008)
chr3 (251-330)||(14209106-14209183)
chr3 (245-293)||(14829677-14829724)
chr3 (251-295)||(16192772-16192816)
chr3 (251-295)||(23870581-23870625)
chr3 (251-291)||(25074782-25074822)
chr3 (251-295)||(26508103-26508147)
chr3 (251-295)||(28917994-28918038)
chr3 (255-291)||(32804566-32804602)
chr3 (251-295)||(34910310-34910354)
[»] scaffold0004 (1 HSPs)
scaffold0004 (245-295)||(92794-92844)
[»] scaffold0044 (1 HSPs)
scaffold0044 (251-337)||(53173-53257)
[»] scaffold0036 (1 HSPs)
scaffold0036 (255-329)||(9737-9809)
[»] scaffold1528 (1 HSPs)
scaffold1528 (251-328)||(1028-1103)
[»] scaffold0306 (1 HSPs)
scaffold0306 (245-295)||(13387-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (245-295)||(21890-21940)
[»] scaffold0103 (1 HSPs)
scaffold0103 (245-295)||(51798-51848)
[»] scaffold0223 (1 HSPs)
scaffold0223 (251-327)||(20165-20239)
[»] scaffold0020 (1 HSPs)
scaffold0020 (251-322)||(135309-135378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (258-328)||(44516-44584)
[»] scaffold0110 (1 HSPs)
scaffold0110 (242-293)||(28834-28885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (245-292)||(192274-192321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (259-329)||(263362-263430)
[»] scaffold0085 (1 HSPs)
scaffold0085 (251-293)||(26386-26428)
[»] scaffold0003 (1 HSPs)
scaffold0003 (245-330)||(241581-241664)
[»] scaffold0697 (1 HSPs)
scaffold0697 (251-291)||(1637-1677)
[»] scaffold0361 (1 HSPs)
scaffold0361 (251-295)||(14523-14567)
[»] scaffold0136 (1 HSPs)
scaffold0136 (255-330)||(3838-3911)
[»] scaffold0066 (1 HSPs)
scaffold0066 (251-295)||(33385-33429)
[»] scaffold0049 (1 HSPs)
scaffold0049 (259-295)||(63774-63810)
[»] scaffold0027 (1 HSPs)
scaffold0027 (251-295)||(46675-46719)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 16 - 334
Target Start/End: Original strand, 1746978 - 1747296
Alignment:
Q  16 ataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1746978 ataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacctt 1747077  T
Q  116 atataaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaagnnnnnnnct 215  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||       ||    
T  1747078 atataaaaatcttaccatacaagattactaggaaattatggtgcatagagtaataatcaaata--------ctaagttggcattttcaaagaaaaaaact 1747169  T
Q  216 agtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa--------cattttat 307  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||    
T  1747170 agtttcaatcaatgaagcaaggacaccgagcacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaattatacgttattatat 1747269  T
Q  308 gtgtcagtgtcgtgttggtgtcgaaca 334  Q
    |||||||||||||||||||||||||||    
T  1747270 gtgtcagtgtcgtgttggtgtcgaaca 1747296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 35723457 - 35723373
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaat-cacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||  ||| |||||||||||||||| | |||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgta--attatatgtgtcagtgtcgtatcggtgtcg 35723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 6005818 - 6006005
Alignment:
Q  18 aatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacattat 117  Q
    |||||| ||||||||||| ||||||||||||||  ||| ||||| || ||||||| |||  ||||||||||  ||||  ||  |||| ||||  ||||||    
T  6005818 aatcaagtccagatgatataattcaagggaaagtgaag-aaaactatataatttaaaacgatgtataacacccaacttgttatattacattgtgcattat 6005916  T
Q  118 ataaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaag 206  Q
    ||||| || ||| ||||||  |||| | || ||||||| |||| || || | || || |||||  |||||||||||| |||||||||||    
T  6005917 ataaatatgttaccatacacaattaattggcaattatgatgcacagggtgacaaacatatacaacaaatctaagttgacattttcaaag 6006005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 40613443 - 40613487
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagt 40613487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 295
Target Start/End: Complemental strand, 8423779 - 8423740
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagt 8423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 20743358 - 20743300
Alignment:
Q  237 gacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||||||| |||||||||||| | |||||| |||||||||| ||||||||||||    
T  20743358 gacatcgaacactgacacgccgacacggataataatttgagaaaatgacataattcagt 20743300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 36635311 - 36635361
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagt 36635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 7012059 - 7012103
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||    
T  7012059 acacgccgacaccgataataatttgagaaaatgacataattcagt 7012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 22234957 - 22234880
Alignment:
Q  251 acacgccgacaccgctaataaattg-agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||||||||||| || ||| | |||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||    
T  22234957 acacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgta--attctatgtgtcggtgtcgtgtcggtgtc 22234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 23293052 - 23293008
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  23293052 acacgccgacacagctaataatttgaaaaaatcacataattcagt 23293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 38148785 - 38148716
Alignment:
Q  257 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    ||||||||||||||  ||||||||||||||||||||||| ||  ||||||  ||||  ||||||||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgta--attttaaatgtcgatgtcgtgttggtgt 38148716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 44132685 - 44132629
Alignment:
Q  276 agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 334  Q
    |||||||||| ||||||||| |||  || |||||||| |||||||||||||||||||||    
T  44132685 agaaaatcacgtaattcagtataa--ttatatgtgtcggtgtcgtgttggtgtcgaaca 44132629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 903909 - 903959
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| ||| ||||| |||||| |||||||||||||||||||||||    
T  903909 acactgacacaccggcaccgttaataatttgagaaaatcacataattcagt 903959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 22440660 - 22440622
Alignment:
Q  257 cgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagt 22440622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 23861492 - 23861455
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  23861492 ccgacaccgctaataaattgataaaatcacatgattca 23861455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 30522973 - 30522932
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagtttaac 300  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaac 30522932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 16189710 - 16189746
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||| || |||||||||||||||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagt 16189746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaa 281  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 20521921 - 20521873
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| ||||||||| |||| |||||| |||| ||||||||||||||||    
T  20521921 acactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 24343500 - 24343544
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||    
T  24343500 acacgccgacacggataataatttgagaaaattacataattcagt 24343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 34200327 - 34200295
Alignment:
Q  261 accgctaataaattgagaaaatcacataattca 293  Q
    ||||||||||| |||||||||||||||||||||    
T  34200327 accgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 32308107 - 32308188
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attgtatgtgtcagtgtcgtgtcggtgt 32308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 19206043 - 19206119
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||  ||| |||||||| ||||| ||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattca--ttataattatatgtgtcggtgtcttgttggtgtc 19206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 29787435 - 29787391
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagt 29787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  252 cacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||    || |||||| ||||||||||||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa----ttgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 6630984 - 6630901
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| ||||||||||||| ||||||| |||||||| |||| ||||||||| ||  ||| ||||||||  ||||||||||||||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgta--attatatgtgtcgatgtcgtgttggtgtcg 6630901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 11722170 - 11722121
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 294  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  11722170 acactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 5548673 - 5548738
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||  ||| ||||||||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgta--attatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 20549778 - 20549850
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||| |||| |||||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgta--attatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 22868029 - 22868097
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagt 315  Q
    ||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||  ||| |||||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgta--attatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 23191891 - 23191933
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagt 23191933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 26733291 - 26733341
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  26733291 acactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 27945028 - 27945078
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  27945028 acactgacacgccgacaccactaataatttgagaaaattacataattcagt 27945078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 22602781 - 22602707
Alignment:
Q  246 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||| ||||||||||||||  ||| | ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 28155563 - 28155604
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattc 28155604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 23128727 - 23128642
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacatgat 338  Q
    |||||| ||||||  |||||| ||||||||| || |||||||||| |||  |  |||||||| |||| ||||||||||||||||||||    
T  23128727 acacgctgacaccaataataatttgagaaaaccatataattcagtgtaa--tcatatgtgtcggtgttgtgttggtgtcgaacatgat 23128642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 24289813 - 24289857
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattcagt 24289857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 24339635 - 24339679
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagt 24339679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 25481895 - 25481939
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagt 25481939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 10042924 - 10042970
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  10042924 acacttacacgccgacaccactaataatttgataaattcacataatt 10042970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 21828477 - 21828402
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    ||||| |||||||||||||| || ||| |||||||||||||||||| || | ||  ||| ||||||||||||| ||||    
T  21828477 acactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgta--attgtatgtgtcagtgttgtgt 21828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 22484012 - 22484062
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| || |||||||  |||||||||||    
T  22484012 acactgacacgccgacaccgctaataattttagaaaattgcataattcagt 22484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 32287523 - 32287485
Alignment:
Q  257 cgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagt 32287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 35297723 - 35297656
Alignment:
Q  266 taataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacat 335  Q
    |||||| |||||||||||||||||||||  |||  ||| |||||||  ||||||||||| ||||||||||    
T  35297723 taataatttgagaaaatcacataattca--ttataattatatgtgttggtgtcgtgttgatgtcgaacat 35297656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 25791640 - 25791685
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataat 290  Q
    ||||| ||||||||||||||||||| | |||||||| |||||||||    
T  25791640 acactgacacgccgacaccgctaattatttgagaaattcacataat 25791685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 26329454 - 26329372
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||| ||||||||||| || |||||| ||||||||| |||| |||||||| ||  ||| |||||||| | ||||||| ||||||    
T  26329454 acactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgta--attatatgtgtcggcgtcgtgtcggtgtc 26329372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 35861950 - 35861999
Alignment:
Q  244 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||    
T  35861950 aacactaacacgccgacacaactaataatttgaaaaaatcacataattca 35861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 1433447 - 1433483
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacat 287  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1433447 acacgccgacaccgttaataatttgagaaaatcacat 1433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 2424619 - 2424651
Alignment:
Q  263 cgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||| |||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagt 2424651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 2425799 - 2425759
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||| ||||| |||||| |||||||||||||||||||    
T  2425799 acacgccggcaccgttaataatttgagaaaatcacataatt 2425759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 5307253 - 5307293
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  5307253 acacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 24362268 - 24362192
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||  ||| ||||||||| |||||||| ||||||    
T  24362268 acacgccgacaccgctaataatttgagagaatcacataattcagtgta--attatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 11927150 - 11927076
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||| | |||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34897078 - 34897122
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  34897078 acacgtcgacaccgctaataatttgagaaaatcacataattcagt 34897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 39954345 - 39954305
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39954345 acacgccgacaccgctaataatttgagaaaatcacataatt 39954305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 31109590 - 31109518
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||| |||||||||||||| |||||| |||||||||||| | |||||||| ||||  | |||||||||||||||    
T  31109590 acactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaac--tatatgtgtcagtgtcg 31109518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 15816201 - 15816118
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| ||||||||||||  ||||||| |||| |||||||||||||| ||| ||  ||| || ||||| |||||||||||||||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta--attataagtgtcggtgtcgtgttggtgtcg 15816118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 31236643 - 31236601
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattca 31236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 13844662 - 13844596
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgta--attatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 18067993 - 18067956
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagt 18067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 13437036 - 13436988
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 22651963 - 22652011
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  22651963 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 27101508 - 27101548
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27101508 acacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 30271381 - 30271313
Alignment:
Q  227 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||  ||||||| ||||| |||||||||||| |||||| | |||| ||||||||||||| ||||    
T  30271381 atgaagcacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagt 30271313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 295
Target Start/End: Original strand, 4611532 - 4611571
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagt 4611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 4786410 - 4786338
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||| |||||||||||||  |||||| || |||||||||||||||||||| ||  ||| |||||||| ||||||    
T  4786410 acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 11944658 - 11944734
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||| ||  ||| |||||||| ||||||||||| ||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgta--attatatgtgtcggtgtcgtgttgatgtc 11944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 7658458 - 7658500
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagt 7658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 27213540 - 27213582
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||||||| |||||||| || ||||||||||||||||||    
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattca 27213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 29510376 - 29510326
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  29510376 acactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 29510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  264 gctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||||||| ||||||||||||||||||||||| ||  ||| || ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgta--attataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 25566841 - 25566910
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 36934657 - 36934705
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||||    
T  36934657 acactaacacgtcgacaccgctaataattcgaaaaaatcacataattca 36934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 10339200 - 10339114
Alignment:
Q  243 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||||| ||||||||||||||| | ||| ||||||||||||||||||||||| | | ||| |||||||||||| ||||| |||||||    
T  10339200 gaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgtta-attatatgtgtcagtgccgtgtcggtgtcg 10339114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 19040336 - 19040411
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  19040336 cgaatactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 26562673 - 26562763
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 334  Q
    |||||||  |||||||||||| ||||| || ||||||||||||||||||||||| ||  ||| ||||||||  |||||||| |||||||||||    
T  26562673 cgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcgatgtcgtgtcggtgtcgaaca 26562763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 7265665 - 7265593
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 9027165 - 9027240
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||  ||| |||||||| |||||||||    
T  9027165 acactgacacgccgacaccgctaataatttgagataatcacataattccgtgta--attatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 9658866 - 9658916
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagt 9658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 5000692 - 5000616
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||  ||||||| |||||||||| ||| ||||||    
T  5000692 acacgtcgacaccgctaataattcgagaaaatcacatgattcagtata--attttatatgtcagtgtcatgtcggtgtc 5000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 7801233 - 7801179
Alignment:
Q  240 accgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcag 294  Q
    |||||||||| ||||||||||||  ||||||| |||| |||||||||||||||||    
T  7801233 accgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcag 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 9629376 - 9629418
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  9629376 acacgccgacaccgccaataatttgagaaaatcacataattca 9629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 16766684 - 16766734
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 16766734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 20371176 - 20371138
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataa 289  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20371176 acacgccgacaccgctaataatttgagaaaatcacataa 20371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 9025553 - 9025491
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    ||||| |||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 17341735 - 17341686
Alignment:
Q  246 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||||||||||||| |||||| |||| ||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagt 17341686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 10842525 - 10842565
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatt 10842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 5732582 - 5732539
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacata 288  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  5732582 acactgacacgccgacaccgttaataatttgagaaaatcacata 5732539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 8931668 - 8931592
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||||| ||||| || |||||||||| |||||||||||| ||  ||| ||||||||  |||||||| ||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtata--attatatgtgtcgatgtcgtgtcggtgtc 8931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 7377972 - 7378014
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  7377972 acaccccgacaccgctaaaaatttgagaaaatcacataattca 7378014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 7996450 - 7996400
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 7996400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 8022351 - 8022401
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 8022401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 9107442 - 9107392
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  9107442 acactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 9107392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 12696311 - 12696361
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  12696311 acactgacacgccgacacagctaataatttgaaaaaattacataattcagt 12696361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 13851723 - 13851773
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||| ||||||||||||||| |||||||||| || |||||||||    
T  13851723 acactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagt 13851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 17841661 - 17841615
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 17841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 19044451 - 19044501
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||  ||||||| ||||||| |||||||||||||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagt 19044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 30866202 - 30866168
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattca 293  Q
    ||||||||||||| |||||||||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattca 30866168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 6665208 - 6665249
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcag 294  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  6665208 acgccgaaaccgctaataatttgagtaaatcacataattcag 6665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 13360447 - 13360394
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||  ||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  13360447 cgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagt 13360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 31959143 - 31959196
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| |||||||| ||| |||||||| |||| ||||||||||||| ||||    
T  31959143 cgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagt 31959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 32511725 - 32511688
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||| || ||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagt 32511688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 34073419 - 34073337
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||| ||| ||| ||| ||||||||| ||||||||||| ||||||||||| ||  ||| |||| ||| ||||||||| ||||||    
T  34073419 acactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgta--attatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 7977896 - 7977852
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagt 7977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 10294104 - 10294177
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| ||||||||||| |||||| |||| |||| |||| | |||  || |||||||| |||||||||||||||||    
T  10294104 gccgataccgctaataatttgagataatcgcatatttcaatgtaa--ttatatgtgtcggtgtcgtgttggtgtcg 10294177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 31579283 - 31579247
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| |||||| |||||||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagt 31579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 33001355 - 33001315
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34595127 - 34595171
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34595127 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 2896193 - 2896143
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 25361881 - 25361956
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||||||||| || |||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgtcggtgtcg 25361956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 36878448 - 36878498
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 34371714 - 34371783
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||    
T  34371714 gacaccgctaataa-ttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtcg 34371783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 9828037 - 9828106
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgta--attttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 10475043 - 10474999
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10475043 acacgccgacaccgctaataacttgagaaaatcacataattcagt 10474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 10572663 - 10572579
Alignment:
Q  243 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||| || ||  |||  ||||||| |||| |||||||||||    
T  10572663 gaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgta--attaaatgtgtcggtgttgtgttggtgtc 10572579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 398837 - 398787
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  398837 acactgacacgccgacaccgctaataatttgaaaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 17831603 - 17831553
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagt 17831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 6427337 - 6427385
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 7918277 - 7918208
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  7918277 acacgctgacatcactaataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 12443526 - 12443482
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 1262868 - 1262919
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||||||||    
T  1262868 cgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 5376572 - 5376522
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| || ||||||| ||||||||||||    
T  5376572 acactaacacgccgacaccgctaataatttaagaaaataacataattcagt 5376522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 6415073 - 6415019
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 299  Q
    ||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  6415073 acactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaa 6415019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 17754304 - 17754379
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 17754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 609531 - 609482
Alignment:
Q  244 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||| ||||||||||||| ||||||| |||||||||| ||||||||||    
T  609531 aacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 19562696 - 19562643
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  19562696 cgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagt 19562643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 44482234 - 44482300
Alignment:
Q  262 ccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| |||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||||| |||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcg 44482300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 113292 - 113336
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagt 113336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 10233254 - 10233290
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagt 10233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 25098617 - 25098577
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagt 25098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34298429 - 34298473
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||    
T  34298429 acacaccgacaccactaataatttgagaaaatcacataattcagt 34298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 9709807 - 9709854
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||    
T  9709807 acactgacatgcctacaccgctaataatttgagaaaatcacataattc 9709854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 295
Target Start/End: Complemental strand, 26238173 - 26238134
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagt 26238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 27471639 - 27471588
Alignment:
Q  244 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| |||| |||| ||||||||||| ||||||||| |||||||||||||    
T  27471639 aacactgacacaccgataccgctaataatttgagaaaagcacataattcagt 27471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 38078736 - 38078685
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||| ||||| |||||| |||||||| |||| ||||||||||||||||    
T  38078736 cgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattca 38078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 39953210 - 39953146
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||||||||||||||||| || |||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgta--attgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 5898330 - 5898288
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  5898330 acgccgacaccgctaataatctgaaaaaatcacataattcagt 5898288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 9103627 - 9103681
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 299  Q
    ||||| |||||||||||| | |||||| |||| |||||||||||||| |||||||    
T  9103627 acactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa 9103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 20157410 - 20157372
Alignment:
Q  257 cgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagt 20157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 38503307 - 38503357
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||| ||||||    
T  38503307 acactaacacaccgacaccgctaataatttgagaaaatcatatatttcagt 38503357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 40285726 - 40285676
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| || ||||||||||||| ||||||||||| |||||||||||    
T  40285726 acactgacacaccaacaccgctaataatttgagaaaatcgcataattcagt 40285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 41877534 - 41877496
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatt 41877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 9690344 - 9690303
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcaca 286  Q
    ||||| |||||| ||||||||||||||| |||||||||||||    
T  9690344 acactgacacgctgacaccgctaataaactgagaaaatcaca 9690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 29163447 - 29163381
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||||||||||||||||| || ||  ||||||||||||||||| ||||  ||| |||||||| ||||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaattta--attatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 31015039 - 31015080
Alignment:
Q  254 cgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagt 31015080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 36905984 - 36906033
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 294  Q
    ||||| |||| || |||||||||||||  |||||||||||||||||||||    
T  36905984 acactgacacaccaacaccgctaataatctgagaaaatcacataattcag 36906033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 40181871 - 40181908
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagt 40181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 1486775 - 1486731
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  1486775 acacgctgacacagctaataatttgaaaaaatcacataattcagt 1486731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 13436451 - 13436495
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| || || |||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagt 13436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 19909298 - 19909334
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  19909298 acaccgctaataatttgagaaaatcacataactcagt 19909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 21378571 - 21378615
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagt 21378615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 21530682 - 21530722
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  21530682 acacgccgacaccgttaataatttgagaaaatcatataatt 21530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 34712449 - 34712380
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||| ||| ||| |||||||| |||||||||| |||||||| ||| |||  || ||||||||||||||||||    
T  34712449 acacaccgtcactgctaataatttgagaaaataacataatttagtgtaa--ttatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 21616755 - 21616799
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21616755 acacgccgacaccgctaataatttgagaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 21782891 - 21782840
Alignment:
Q  244 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  21782891 aacactgacacgccgacactgctaataatttgagaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 44860320 - 44860388
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    |||||||||||||| ||||||||||| ||||||||||| ||  ||| |||||||| |||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgta--attatatgtgtcggtgtcgtgttggtgt 44860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 31284035 - 31284080
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataat 290  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataat 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 37411306 - 37411266
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaatcacataattcagt 37411266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 18889651 - 18889613
Alignment:
Q  257 cgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  18889651 cgacgccgctaataaattgagaaaatcacataattcagt 18889613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 23718013 - 23718063
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 23718063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 24105685 - 24105735
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 24105735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 28677904 - 28677946
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagt 28677946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 24894357 - 24894426
Alignment:
Q  227 atgaagcaaggacac-cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| |||||| || ||||| |||||||||||| |||||||| || | ||||||||||||||||||    
T  24894357 atgaagcacggacacacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 31808064 - 31808134
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgt 317  Q
    ||||| |||| |||||||||||||||| || | |||||||||||||||||| ||  ||| |||||||||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgta--attatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 18276518 - 18276558
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagt 18276558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 10535823 - 10535781
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagt 10535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 18420500 - 18420458
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  18420500 acacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 21374771 - 21374721
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  21374771 acactaacacgccgacacagctaataatttgaaaaaattacataattcagt 21374721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 30404922 - 30404872
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| | |||||| |||| ||||||||||||||||||    
T  30404922 acactgacacgccgacacggttaataatttgaaaaaatcacataattcagt 30404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 36409689 - 36409619
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||||||||| |||| |||| |||||||||||||| ||| |||    ||||||||| ||||| ||||||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaa----ttatgtgtcggtgtcatgttggtgtc 36409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 896198 - 896246
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||  |||||||||||||||| ||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttca 896246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 19573971 - 19574015
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||    
T  19573971 acacgccgacaccgataataatttaagaaaataacataattcagt 19574015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 35447960 - 35447904
Alignment:
Q  244 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 300  Q
    ||||||||||||| |||| ||||||||| |  ||||||| |||||||||||| ||||    
T  35447960 aacacttacacgctgacatcgctaataattaaagaaaattacataattcagtataac 35447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 37558964 - 37559012
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||  ||||||||||||||||    
T  37558964 acactgacacgccgacacagctaataatttgtaaaaatcacataattca 37559012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 42832342 - 42832298
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagt 42832298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 3966481 - 3966565
Alignment:
Q  236 ggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||||| | ||||| ||| ||||||||||||||||| |||||||||||||| |||||||| ||  ||| |||||||| |||||||||    
T  3966481 ggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgta--attatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 30098295 - 30098361
Alignment:
Q  227 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||| |||||||| ||||| ||||| ||| |||| |||||| |||||||||||||||||||||    
T  30098295 atgaagcacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattca 30098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 19737582 - 19737506
Alignment:
Q  217 gtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||||  ||||||||||||| || ||||| |||||| || |||| |||||| |||||||||| ||||||||||    
T  19737582 gtttcaatctctgaagcaaggacaacggacactgacacgctgaaaccgataataatttgagaaaattacataattca 19737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 28588740 - 28588696
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagt 28588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 27932229 - 27932272
Alignment:
Q  252 cacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagt 27932272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 27144450 - 27144496
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27144450 acactgacacgccgacaccgctaataatttgaggaaatcacataatt 27144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 39698528 - 39698611
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| |||||| ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| |||||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcg 39698611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 17123035 - 17123080
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataat 290  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  17123035 acactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 31084310 - 31084358
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 31084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 2436909 - 2436956
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  2436909 acactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 6247609 - 6247659
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagt 6247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 6326369 - 6326319
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  6326369 acactgacacgccgacatcgctagtaatttgagaaaattacataattcagt 6326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 14674256 - 14674302
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 14674302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Original strand, 19579696 - 19579734
Alignment:
Q  253 acgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 21191128 - 21191078
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||| |||||||| |||||||| |||| ||||||||||||||||||    
T  21191128 acactgacatgccgacacagctaataatttgaaaaaatcacataattcagt 21191078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 6471948 - 6471911
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagt 6471911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 9449463 - 9449504
Alignment:
Q  252 cacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  9449463 cacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 21576820 - 21576767
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| | ||||| |||| |||||||| |||| ||||||||||||||||||    
T  21576820 cgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagt 21576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 26716141 - 26716178
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattc 292  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26716141 gccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 26985881 - 26985918
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattc 292  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26985881 gccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 32767004 - 32766930
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaa 332  Q
    |||||||||||||||| ||||||||||| || |||||| | ||  ||| |||||||  ||||||||| |||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgta--attatatgtgtttgtgtcgtgtcggtgtcgaa 32766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgtt 323  Q
    ||||||||||||| |||||||||| |||||||| ||| ||  ||| |||||||| ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgta--attatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 38816761 - 38816679
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcac-ataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacatg 336  Q
    ||||||||||||||||||||| ||||||||||| | ||| |||||| |||    ||||||||| |||| |||| ||||||| |||||    
T  38816761 acacgccgacaccgctaataatttgagaaaatcgctatatttcagtataa----ttatgtgtcggtgtggtgtcggtgtcggacatg 38816679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 4344727 - 4344779
Alignment:
Q  243 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||| |||||| ||||||| |||||| |||| ||||| ||||||||||||    
T  4344727 gaacactaacacgctgacaccgataataatttgaaaaaatgacataattcagt 4344779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 11685926 - 11685999
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 320  Q
    ||||| ||| ||||||||||||||||| |||||||| || ||||||| ||| ||  ||| |||||||| |||||||    
T  11685926 acactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgta--attatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34879343 - 34879387
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| ||||||||| || |||||||||||| ||||||||||    
T  34879343 acacgccggcaccgctaaaaatttgagaaaatcatataattcagt 34879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 35017030 - 35017070
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatt 35017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 8039901 - 8039817
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacatga 337  Q
    ||||||| ||||||||||||| |||||||||| | |||||||||| ||  ||| |||||||| ||||||||| ||||||| ||||||    
T  8039901 acacgccaacaccgctaataatttgagaaaattatataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcggacatga 8039817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 4987365 - 4987313
Alignment:
Q  243 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  4987365 gaacactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 4987313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 8383250 - 8383294
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  8383250 acacgccgacaccgctaataatttgagaaaatcatataattcagt 8383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 26290358 - 26290431
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 320  Q
    ||||| |||||||||||||  |||||| |||||||||||||||| ||| |||||  ||| ||||||||||||||||    
T  26290358 acactgacacgccgacaccattaataatttgagaaaatcacatagttcggttta--attatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 299
Target Start/End: Complemental strand, 8413038 - 8412963
Alignment:
Q  224 tcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 299  Q
    ||||||||||| |||||||| ||| | |||  |||||||  ||||||| ||||||||| |||||||||||||||||    
T  8413038 tcaatgaagcacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataattcagtttaa 8412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 5407313 - 5407271
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  5407313 acacgccgacaccgctaaaaatttgagaaaatcacataattca 5407271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 10690333 - 10690284
Alignment:
Q  246 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  10690333 cacttacactcggacaccgctaataatctgagaaaatcacataattcagt 10690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 10954936 - 10954989
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  10954936 cgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagt 10954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 49505220 - 49505154
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||||| || ||||||||||| ||||||||||||||||||| ||| ||  ||| |||||||||||||||    
T  49505220 acacgcagagaccgctaataatttgagaaaatcacataatttagtgta--attatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 5441103 - 5441055
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||    
T  5441103 acactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 319  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 12704000 - 12704044
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagt 12704044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 34307846 - 34307802
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagt 34307802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 40052319 - 40052367
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  40052319 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 2620125 - 2620070
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 300  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||| ||| ||||    
T  2620125 acactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaac 2620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 9800027 - 9800074
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||| ||||||||||||| ||||||| |||||||||| |||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 11313861 - 11313797
Alignment:
Q  256 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||  ||| ||||||| ||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgta--attatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 14979175 - 14979218
Alignment:
Q  252 cacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 1438791 - 1438841
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||| |||||| |||||| || |||||||||||||||||||||||    
T  1438791 acactgacacaccgacatcgctaacaatttgagaaaatcacataattcagt 1438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 21479105 - 21479155
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  21479105 acactgacacgccgacacagctaataatttgaaaaaatcacacaattcagt 21479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 21720751 - 21720801
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||||| |||||| ||||||| ||| |||||||||||    
T  21720751 acactgacacgccgacaccgataataatttgagaatatctcataattcagt 21720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 25064902 - 25064977
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||| |||    ||||||||  || ||||||||||||||    
T  25064902 acacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaa----ttatgtgttggtatcgtgttggtgtcg 25064977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 24633763 - 24633800
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24633763 gccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 28678290 - 28678372
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    ||||| ||| |||||| | |||||||| || | |||||||||||||| ||| |||  || |||||||| ||||||||||||||||    
T  28678290 acactgacatgccgacgctgctaataatttaataaaatcacataatttagtataa--ttgtatgtgtcggtgtcgtgttggtgtc 28678372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 32429455 - 32429402
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| | |||| |||||| ||||||||| || ||||||||||||||||||||    
T  32429455 cgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagt 32429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 4991033 - 4990989
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| |||||||||||||||  |||||||||| ||||||||||||    
T  4991033 acactccgacaccgctaatagtttgagaaaattacataattcagt 4990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 11493427 - 11493383
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  11493427 acacgtcgacaccactaataatgtgagaaaatcacataattcagt 11493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 11610514 - 11610558
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||    
T  11610514 acacgccaacaccgctaataatttaaaaaaatcacataattcagt 11610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 11665931 - 11666008
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttg 324  Q
    ||||| |||| |||||| ||||||||| |||| ||||||||| |||| ||| |||  || |||||||| |||||||||||    
T  11665931 acactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaa--ttatatgtgtcggtgtcgtgttg 11666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 14209106 - 14209183
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||||||||||  ||||||| || | |||||||||||||||||| ||  |||  | ||||||||||||||| |||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcg 14209183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 14829677 - 14829724
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  14829677 acactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 16192816 - 16192772
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||| ||||||||| |||||| |||||||||| ||||||||||||    
T  16192816 acacaccgacaccgttaataatttgagaaaataacataattcagt 16192772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 23870625 - 23870581
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  23870625 acacgtcgacaccgctaataatttgaaaaaatcatataattcagt 23870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 25074782 - 25074822
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  25074782 acacgccgacaccgataataatttgagaaaatgacataatt 25074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 26508103 - 26508147
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  26508103 acacgctgacacagctaataatttgaaaaaatcacataattcagt 26508147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 28917994 - 28918038
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||    
T  28917994 acacgccgacatagctaataatttgaaaaaatcacataattcagt 28918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 32804602 - 32804566
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||| |||||| |||||||||||||||||||    
T  32804602 gccgacaccgttaataatttgagaaaatcacataatt 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 34910310 - 34910354
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34910310 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 92794 - 92844
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagt 92844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 53173 - 53257
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacatga 337  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||| ||  ||| || ||||| ||| ||||| ||||||| ||||||    
T  53173 acacgccgataccgccaataatttgagaaaatcacataattcagtgta--attataagtgtcggtgccgtgtcggtgtcggacatga 53257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 9809 - 9737
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||||| || ||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||||||||||||    
T  9809 gccgacgccactaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 9737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 1028 - 1103
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 13387 - 13437
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 13437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 21940 - 21890
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 21890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 51798 - 51848
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 51848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 20165 - 20239
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtg 327  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||    
T  20165 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 322  Q
    |||| ||||||| |||||||| |||||||||||||||||||| || ||  ||| |||||||| |||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgta--attatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 44584 - 44516
Alignment:
Q  258 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 328  Q
    ||||||||||| || ||||||||||||||||||||||| ||  ||| |||||||| || |||||| |||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcggtatcgtgtcggtgt 44516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 28834 - 28885
Alignment:
Q  242 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    |||||||| |||||||||||||| |||||| || |||||||| |||||||||    
T  28834 cgaacactaacacgccgacaccgttaataatttaagaaaatcgcataattca 28885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 192321 - 192274
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 292  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  192321 acactgacacgccgacaccgttaataatttgagaaaattacataattc 192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 263430 - 263362
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 329  Q
    |||| |||||||| ||||||||| ||||||||||||| ||  ||| || ||||||||||||||| ||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgta--attataagtgtcagtgtcgtgtcggtgtc 263362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 26386 - 26428
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattca 293  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||    
T  26386 acacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 241581 - 241664
Alignment:
Q  245 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||| ||| ||  ||| |  ||||| |||||||||||||||||    
T  241581 acactgacacgccgacacagctaataatttggaaaaatcacataatttagtgta--attatgagtgtcggtgtcgtgttggtgtcg 241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 1637 - 1677
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataatt 291  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  1637 acacgccgacaccgttaataatttgagaaaatcatataatt 1677  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 14523 - 14567
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagt 14567  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 3911 - 3838
Alignment:
Q  255 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 330  Q
    |||||||| | |||||| || | |||||||||||||||||| |||  ||  | |||||||||||||||||||||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaa--ttacaagtgtcagtgtcgtgttggtgtcg 3838  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 33429 - 33385
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagt 33385  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 63774 - 63810
Alignment:
Q  259 acaccgctaataaattgagaaaatcacataattcagt 295  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagt 63810  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 46675 - 46719
Alignment:
Q  251 acacgccgacaccgctaataaattgagaaaatcacataattcagt 295  Q
    |||||||||||| | |||||| |||| ||||||||||||||||||    
T  46675 acacgccgacacagttaataatttgaaaaaatcacataattcagt 46719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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