View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9123_low_7 (Length: 402)

Name: NF9123_low_7
Description: NF9123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9123_low_7
NF9123_low_7
[»] chr6 (26 HSPs)
chr6 (16-392)||(31115881-31116258)
chr6 (20-128)||(34905386-34905494)
chr6 (20-132)||(445868-445980)
chr6 (20-128)||(21987342-21987450)
chr6 (20-128)||(1392678-1392785)
chr6 (20-128)||(5106348-5106456)
chr6 (20-118)||(16852005-16852103)
chr6 (20-117)||(10133191-10133288)
chr6 (21-129)||(12753781-12753889)
chr6 (20-128)||(32112739-32112847)
chr6 (20-132)||(2675945-2676057)
chr6 (20-132)||(32122845-32122957)
chr6 (20-128)||(32598970-32599078)
chr6 (34-128)||(12780781-12780875)
chr6 (22-122)||(16187460-16187558)
chr6 (22-122)||(16187678-16187776)
chr6 (20-126)||(19090238-19090345)
chr6 (50-128)||(8441871-8441949)
chr6 (50-128)||(8450675-8450753)
chr6 (26-128)||(16436121-16436222)
chr6 (77-132)||(34882246-34882303)
chr6 (20-107)||(12784982-12785069)
chr6 (20-70)||(6531378-6531428)
chr6 (20-126)||(17144695-17144801)
chr6 (88-141)||(373518-373571)
chr6 (20-104)||(12690302-12690387)
[»] chr2 (43 HSPs)
chr2 (17-128)||(10981565-10981676)
chr2 (21-128)||(12989242-12989349)
chr2 (20-122)||(9470131-9470233)
chr2 (20-128)||(38464213-38464321)
chr2 (23-128)||(26767783-26767888)
chr2 (21-123)||(44274285-44274387)
chr2 (20-117)||(34142172-34142269)
chr2 (20-128)||(6980142-6980250)
chr2 (20-127)||(11539473-11539583)
chr2 (20-125)||(36471863-36471968)
chr2 (20-128)||(37652267-37652375)
chr2 (64-115)||(4552875-4552926)
chr2 (20-128)||(45554617-45554717)
chr2 (39-121)||(15884498-15884580)
chr2 (38-126)||(472187-472275)
chr2 (24-128)||(32856157-32856261)
chr2 (36-128)||(36094006-36094098)
chr2 (38-109)||(7919311-7919382)
chr2 (20-122)||(12098894-12098997)
chr2 (20-103)||(45270603-45270686)
chr2 (20-122)||(19639143-19639245)
chr2 (20-122)||(19837736-19837838)
chr2 (20-122)||(24497242-24497344)
chr2 (20-117)||(32701520-32701617)
chr2 (20-104)||(18511255-18511339)
chr2 (51-127)||(30718350-30718426)
chr2 (60-128)||(33678138-33678206)
chr2 (20-115)||(35316436-35316531)
chr2 (20-137)||(37078010-37078128)
chr2 (20-129)||(6420475-6420583)
chr2 (55-128)||(25238299-25238372)
chr2 (20-117)||(25730472-25730569)
chr2 (20-117)||(30849287-30849384)
chr2 (23-125)||(24895291-24895394)
chr2 (24-114)||(2122849-2122939)
chr2 (20-113)||(28898073-28898167)
chr2 (20-78)||(42182939-42182997)
chr2 (20-118)||(43414405-43414503)
chr2 (20-132)||(3804634-3804747)
chr2 (80-121)||(27494480-27494521)
chr2 (20-53)||(31494256-31494289)
chr2 (20-124)||(38104298-38104403)
chr2 (20-116)||(17188115-17188211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-128)||(27862-27970)
[»] chr3 (42 HSPs)
chr3 (20-128)||(18427172-18427280)
chr3 (22-128)||(52123978-52124084)
chr3 (20-128)||(41451917-41452025)
chr3 (20-128)||(46450115-46450224)
chr3 (20-141)||(55452024-55452145)
chr3 (20-128)||(20791346-20791454)
chr3 (20-128)||(24734755-24734863)
chr3 (20-128)||(28529303-28529409)
chr3 (20-128)||(20493467-20493575)
chr3 (20-127)||(46160997-46161104)
chr3 (20-128)||(2419486-2419594)
chr3 (20-128)||(37776725-37776833)
chr3 (20-122)||(10948588-10948690)
chr3 (20-128)||(50156682-50156790)
chr3 (20-128)||(14236069-14236177)
chr3 (39-117)||(752461-752539)
chr3 (20-128)||(27243095-27243204)
chr3 (20-128)||(29588755-29588863)
chr3 (20-135)||(41387611-41387726)
chr3 (39-117)||(742025-742103)
chr3 (20-121)||(48351486-48351587)
chr3 (20-128)||(8825001-8825109)
chr3 (20-120)||(22604610-22604710)
chr3 (20-118)||(19345032-19345130)
chr3 (20-128)||(5452084-5452190)
chr3 (22-103)||(49072057-49072138)
chr3 (45-128)||(29755575-29755658)
chr3 (82-132)||(24429043-24429093)
chr3 (31-125)||(39186025-39186119)
chr3 (86-123)||(15790397-15790434)
chr3 (20-101)||(26310495-26310576)
chr3 (20-129)||(46575998-46576108)
chr3 (34-123)||(38414711-38414800)
chr3 (20-128)||(138813-138921)
chr3 (20-127)||(13809131-13809239)
chr3 (60-128)||(29388616-29388684)
chr3 (20-127)||(44844031-44844139)
chr3 (96-135)||(28576104-28576143)
chr3 (82-117)||(38138615-38138650)
chr3 (20-78)||(43657068-43657126)
chr3 (25-122)||(37285338-37285435)
chr3 (20-69)||(46237127-46237176)
[»] chr4 (46 HSPs)
chr4 (20-128)||(8109006-8109114)
chr4 (20-128)||(722207-722315)
chr4 (20-128)||(43771176-43771284)
chr4 (20-128)||(754602-754710)
chr4 (20-128)||(39471207-39471315)
chr4 (20-124)||(24834628-24834732)
chr4 (16-121)||(34129429-34129534)
chr4 (21-128)||(49242221-49242328)
chr4 (20-128)||(26361330-26361438)
chr4 (20-128)||(47009239-47009347)
chr4 (20-128)||(50164445-50164553)
chr4 (20-137)||(20225354-20225471)
chr4 (20-129)||(24938436-24938545)
chr4 (29-105)||(13520008-13520084)
chr4 (20-121)||(25719141-25719243)
chr4 (20-106)||(49077299-49077385)
chr4 (20-137)||(50481560-50481675)
chr4 (60-146)||(54543428-54543514)
chr4 (20-129)||(33653510-33653619)
chr4 (20-128)||(22542431-22542539)
chr4 (20-116)||(46287491-46287587)
chr4 (20-128)||(52671880-52671988)
chr4 (20-127)||(29699539-29699645)
chr4 (21-128)||(40991611-40991718)
chr4 (20-122)||(5044568-5044670)
chr4 (20-122)||(45310976-45311078)
chr4 (27-142)||(16178640-16178756)
chr4 (20-128)||(20454590-20454696)
chr4 (51-119)||(45081773-45081841)
chr4 (20-103)||(41153245-41153328)
chr4 (38-128)||(1559936-1560026)
chr4 (55-121)||(37451042-37451108)
chr4 (20-117)||(10169678-10169775)
chr4 (23-128)||(43124536-43124641)
chr4 (20-125)||(31250907-31251013)
chr4 (20-110)||(48339380-48339470)
chr4 (80-125)||(19321901-19321946)
chr4 (20-128)||(19447181-19447290)
chr4 (28-117)||(46536295-46536384)
chr4 (20-72)||(22592354-22592406)
chr4 (20-107)||(4138915-4139002)
chr4 (21-128)||(19937194-19937301)
chr4 (20-103)||(49769851-49769934)
chr4 (20-78)||(30867004-30867062)
chr4 (74-119)||(11895141-11895186)
chr4 (80-128)||(52279281-52279329)
[»] chr7 (46 HSPs)
chr7 (20-117)||(33008154-33008251)
chr7 (21-126)||(27888333-27888438)
chr7 (20-128)||(22189989-22190097)
chr7 (20-122)||(11824121-11824223)
chr7 (24-129)||(12263457-12263562)
chr7 (20-128)||(11692229-11692337)
chr7 (20-128)||(27949323-27949431)
chr7 (20-128)||(48374461-48374569)
chr7 (20-117)||(10933998-10934095)
chr7 (20-117)||(32212903-32212999)
chr7 (20-128)||(7775050-7775157)
chr7 (34-128)||(6580024-6580118)
chr7 (20-110)||(31502504-31502594)
chr7 (20-128)||(6442215-6442323)
chr7 (29-105)||(9648983-9649059)
chr7 (20-128)||(14795181-14795289)
chr7 (20-128)||(15242173-15242281)
chr7 (80-147)||(12167317-12167384)
chr7 (20-122)||(46517341-46517443)
chr7 (20-128)||(25686857-25686965)
chr7 (20-128)||(32178826-32178933)
chr7 (29-144)||(23564037-23564156)
chr7 (20-122)||(32205126-32205228)
chr7 (22-114)||(1688035-1688127)
chr7 (20-128)||(39254133-39254241)
chr7 (82-128)||(7774956-7775002)
chr7 (20-78)||(17354599-17354657)
chr7 (74-128)||(31874120-31874174)
chr7 (38-123)||(31731282-31731367)
chr7 (20-121)||(44350831-44350932)
chr7 (21-128)||(19422856-19422963)
chr7 (20-127)||(24539145-24539253)
chr7 (75-125)||(36845516-36845566)
chr7 (20-125)||(45909506-45909612)
chr7 (84-121)||(1316387-1316424)
chr7 (88-129)||(38065347-38065388)
chr7 (20-127)||(17749744-17749852)
chr7 (82-125)||(7459455-7459498)
chr7 (82-129)||(32943838-32943885)
chr7 (20-87)||(44510999-44511066)
chr7 (25-103)||(25092708-25092786)
chr7 (51-105)||(36845567-36845621)
chr7 (25-78)||(12271041-12271093)
chr7 (35-128)||(30742562-30742655)
chr7 (87-128)||(31628116-31628157)
chr7 (27-126)||(25428502-25428602)
[»] chr1 (52 HSPs)
chr1 (20-144)||(41958133-41958257)
chr1 (20-121)||(8741252-8741353)
chr1 (20-128)||(19101623-19101731)
chr1 (20-128)||(33193100-33193208)
chr1 (23-126)||(30678935-30679038)
chr1 (20-129)||(26980283-26980392)
chr1 (20-129)||(32211805-32211914)
chr1 (20-128)||(11987676-11987784)
chr1 (25-128)||(8899069-8899172)
chr1 (20-121)||(51732327-51732428)
chr1 (20-128)||(41948168-41948276)
chr1 (20-115)||(2225274-2225369)
chr1 (20-122)||(6133653-6133754)
chr1 (20-122)||(37552977-37553079)
chr1 (51-116)||(47644331-47644396)
chr1 (24-128)||(10659791-10659894)
chr1 (20-104)||(22540418-22540502)
chr1 (20-128)||(25543390-25543497)
chr1 (20-128)||(15523260-15523364)
chr1 (20-128)||(15531254-15531358)
chr1 (20-122)||(15928605-15928707)
chr1 (20-146)||(29673525-29673651)
chr1 (22-135)||(31866368-31866480)
chr1 (20-101)||(49730914-49730995)
chr1 (20-128)||(27570275-27570383)
chr1 (20-120)||(28218078-28218178)
chr1 (83-135)||(35336973-35337025)
chr1 (20-135)||(45179261-45179376)
chr1 (20-105)||(1093118-1093203)
chr1 (29-113)||(3872671-3872755)
chr1 (29-105)||(6325858-6325933)
chr1 (84-128)||(39974222-39974266)
chr1 (82-121)||(16948558-16948597)
chr1 (34-128)||(931438-931532)
chr1 (20-125)||(11135789-11135895)
chr1 (60-122)||(12767356-12767418)
chr1 (34-128)||(15468284-15468378)
chr1 (20-129)||(44271968-44272077)
chr1 (20-127)||(13114692-13114800)
chr1 (20-127)||(15660943-15661049)
chr1 (27-78)||(44739175-44739226)
chr1 (20-78)||(11430491-11430549)
chr1 (20-78)||(14094073-14094131)
chr1 (20-78)||(29418531-29418589)
chr1 (84-146)||(29673688-29673750)
chr1 (20-53)||(18157088-18157121)
chr1 (88-129)||(26980378-26980419)
chr1 (97-129)||(28274809-28274841)
chr1 (20-128)||(33059915-33060022)
chr1 (36-128)||(33114037-33114129)
chr1 (20-68)||(45426837-45426885)
chr1 (20-96)||(46335147-46335223)
[»] chr8 (41 HSPs)
chr8 (16-128)||(1977195-1977307)
chr8 (16-128)||(5979926-5980037)
chr8 (20-128)||(9952779-9952887)
chr8 (20-143)||(43506585-43506706)
chr8 (25-128)||(24055947-24056050)
chr8 (20-125)||(17499258-17499363)
chr8 (20-132)||(32072147-32072259)
chr8 (21-141)||(8914822-8914942)
chr8 (20-128)||(16983444-16983552)
chr8 (29-137)||(41727489-41727597)
chr8 (20-119)||(8903902-8904001)
chr8 (20-135)||(14236388-14236503)
chr8 (20-118)||(28413901-28413999)
chr8 (60-128)||(7493364-7493432)
chr8 (20-128)||(34861214-34861317)
chr8 (20-128)||(23685181-23685285)
chr8 (24-128)||(6098799-6098901)
chr8 (20-121)||(31301165-31301265)
chr8 (20-129)||(36804860-36804969)
chr8 (20-129)||(35797445-35797552)
chr8 (20-128)||(13407345-13407454)
chr8 (20-125)||(17741552-17741657)
chr8 (53-129)||(36629740-36629817)
chr8 (20-127)||(6387611-6387719)
chr8 (20-128)||(13214545-13214653)
chr8 (84-122)||(5095788-5095826)
chr8 (80-146)||(9453573-9453639)
chr8 (20-125)||(45246484-45246589)
chr8 (20-128)||(35151751-35151859)
chr8 (20-103)||(9193432-9193515)
chr8 (20-126)||(35689530-35689637)
chr8 (20-132)||(45524893-45525006)
chr8 (20-96)||(17716901-17716977)
chr8 (84-128)||(17915926-17915970)
chr8 (90-128)||(28700577-28700615)
chr8 (34-128)||(34952507-34952601)
chr8 (20-53)||(28485478-28485511)
chr8 (81-121)||(3099635-3099675)
chr8 (84-128)||(5727346-5727390)
chr8 (82-142)||(39455657-39455717)
chr8 (71-139)||(43121539-43121607)
[»] chr5 (35 HSPs)
chr5 (20-128)||(28490744-28490852)
chr5 (20-126)||(41105594-41105700)
chr5 (20-129)||(43405443-43405552)
chr5 (20-132)||(10141994-10142106)
chr5 (20-128)||(30325896-30326004)
chr5 (20-117)||(5413770-5413867)
chr5 (16-146)||(10253089-10253216)
chr5 (27-142)||(25710480-25710595)
chr5 (20-103)||(36337937-36338020)
chr5 (20-128)||(34384713-34384821)
chr5 (20-112)||(39246658-39246750)
chr5 (20-110)||(27592492-27592582)
chr5 (21-110)||(34368411-34368500)
chr5 (20-105)||(41330438-41330523)
chr5 (13-123)||(17434876-17434986)
chr5 (20-91)||(25564006-25564076)
chr5 (26-129)||(28090250-28090353)
chr5 (20-122)||(28434846-28434946)
chr5 (20-122)||(28223804-28223906)
chr5 (20-122)||(37455399-37455500)
chr5 (21-122)||(10950137-10950238)
chr5 (20-129)||(17537123-17537232)
chr5 (29-111)||(25630866-25630948)
chr5 (20-117)||(2525624-2525721)
chr5 (74-123)||(14553616-14553665)
chr5 (80-128)||(5465674-5465722)
chr5 (34-121)||(1923581-1923668)
chr5 (89-132)||(38607169-38607212)
chr5 (25-103)||(25919266-25919344)
chr5 (36-126)||(28611802-28611892)
chr5 (20-117)||(13381813-13381910)
chr5 (79-128)||(16875372-16875421)
chr5 (80-129)||(25002026-25002075)
chr5 (20-108)||(4714799-4714887)
chr5 (80-128)||(12076084-12076132)
[»] scaffold0543 (1 HSPs)
scaffold0543 (20-107)||(9714-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (20-107)||(11260-11347)
[»] scaffold0204 (1 HSPs)
scaffold0204 (20-110)||(26902-26992)
[»] scaffold0095 (1 HSPs)
scaffold0095 (82-142)||(14023-14083)
[»] scaffold0008 (1 HSPs)
scaffold0008 (95-123)||(121227-121255)
[»] scaffold0005 (1 HSPs)
scaffold0005 (97-129)||(296859-296891)


Alignment Details
Target: chr6 (Bit Score: 358; Significance: 0; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 16 - 392
Target Start/End: Complemental strand, 31116258 - 31115881
Alignment:
Q  16 cttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31116258 cttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 31116159  T
Q  116 tagagagagtgttgctaacactcctctttttaagattatttggtcgagccttgcttctttgggtgaatcaataaaacttctttgcatttctattccaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31116158 tagagagagtgttgctagcactcctctttttaagattatttggtcgagccttgcttctttgagtgaatcaataaaacttctttgcatttctattccaatt 31116059  T
Q  216 tagtggaaccttttcactgtattaaaggatataatatgatttaagaaatgaaaaacttcatatatgatgacaaatctattgtatcaaagtttttcatttc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31116058 tagtggaaccttttcactgtattaaaggatataatatgatttaagaaatgaaaaacttcatatatgatgacaaatctattgtatcaaagtttttcatttc 31115959  T
Q  316 tca-taacacttcacagtattacaattttacatctaaattactctgatgctgctgactacatgtagttttccaatacc 392  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31115958 tcattaacacttcacagtattacaattttacatctaaattactctgatgctgctgactacatgtagttttccaatacc 31115881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 34905386 - 34905494
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||||| || |||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  34905386 tattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 34905485  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  34905486 gagggtgtt 34905494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 445868 - 445980
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| |||| ||| || || |  ||||||||||||||||||||||||| |||||||||||    
T  445868 tattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtattaga 445967  T
Q  120 gagagtgttgcta 132  Q
    |||||||||||||    
T  445968 gagagtgttgcta 445980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 21987342 - 21987450
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||| |||||| ||||| || | ||||||||||||| ||||| | || ||||||||||||||||||||| |||||||||||||    
T  21987342 tattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattaga 21987441  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  21987442 gagagtgtt 21987450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 1392678 - 1392785
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||| ||||  ||  ||||  |||||||||||||||||||||||||||||||||||||||    
T  1392678 tattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtattaga 1392776  T
Q  120 gagagtgtt 128  Q
     || |||||    
T  1392777 tagggtgtt 1392785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 5106348 - 5106456
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||||||||||||| |||||||||| | || |||| ||| ||||| |||||||| ||||||||||||||| ||||||| |||||||    
T  5106348 tattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataatagagtgaatattaga 5106447  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  5106448 gagtgtgtt 5106456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 16852103 - 16852005
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||| |||||||| |||||||||||||| |||||||  | |||| |||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  16852103 tattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtattag 16852005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 10133288 - 10133191
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||||| |||||||||||| ||||| || | |||| |||| ||| ||||| | |||||||||||||||||||||| |||||||||||||    
T  10133288 tattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtagaaccacaatgatttaaaccaataaaagagtgagtatta 10133191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 12753889 - 12753781
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    ||||||| ||||  ||| ||||||||| |||||||||| ||||||||| ||  ||||| || ||||||||||||||| ||||| |||| |||||||||||    
T  12753889 attggataaaatacatgcatgtcccaccactttgtgtgggttctattttcagggtgtacactcacaatgatttaaactaataaaagagcgagtattagag 12753790  T
Q  121 agagtgttg 129  Q
    |||||||||    
T  12753789 agagtgttg 12753781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 32112847 - 32112739
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||| ||||| ||| | |||||||| ||| ||||| ||| ||||| | ||||||||||||||| |||||||||||||| |||||||    
T  32112847 tattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatattaga 32112748  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  32112747 gagaatgtt 32112739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 2675945 - 2676057
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||| | |||||||||||||| ||||||| |  |||  |||| |||  |||| |||||||||| ||||||||||||| | |||||||||||||    
T  2675945 tattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtgagtattaga 2676044  T
Q  120 gagagtgttgcta 132  Q
    |||||||||||||    
T  2676045 gagagtgttgcta 2676057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 32122845 - 32122957
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||||||| | |||||| | |||| |||| ||| ||||| |||||||||||||||| ||||||| | ||||| || ||||    
T  32122845 tattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataaaaaagtgaataataga 32122944  T
Q  120 gagagtgttgcta 132  Q
    || ||||||||||    
T  32122945 gatagtgttgcta 32122957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 32599078 - 32598970
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| |||  ||||||||||| | |||||||||| || |||||||||| ||||| |  |||||||||||||| |||||| ||||||||||||| |    
T  32599078 tattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgagtattaaa 32598979  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  32598978 gagaatgtt 32598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 12780875 - 12780781
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||| |||||||||||||  |||| |||| ||| ||||| | ||||||||||||||||||||||| || ||| |||||||||| |||||    
T  12780875 aatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatattagagagggtgtt 12780781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 16187558 - 16187460
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||||| |||| |||||||  ||||| | |||||||  |||| |||| ||| ||||| ||| ||||| ||||||||||||||| ||||||||||||||||    
T  16187558 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagaga 16187461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 16187776 - 16187678
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||||| |||| |||||||  ||||| | |||||||  |||| |||| ||| ||||| ||| ||||| ||||||||||||||| ||||||||||||||||    
T  16187776 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagaga 16187679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 19090345 - 19090238
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||   || ||| ||| || ||||||||| |||||||||  |||    
T  19090345 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctag 19090246  T
Q  119 agagagtg 126  Q
    ||||||||    
T  19090245 agagagtg 19090238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 8441949 - 8441871
Alignment:
Q  50 ctttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||| | |||| |||| ||| ||||| |||  |||| || ||||||||||| ||||||||||||||||||||||||    
T  8441949 ctttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgtt 8441871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 8450753 - 8450675
Alignment:
Q  50 ctttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||| | |||| |||| ||| ||||| |||  |||| || ||||||||||| ||||||||||||||||||||||||    
T  8450753 ctttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgtt 8450675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 16436121 - 16436222
Alignment:
Q  26 atgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    ||||||| |||||||| ||||| | |||||||| |||||||||| || ||||| ||||| || |||||||||||||||  || ||| ||||| | |||||    
T  16436121 atgaaatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataatcgactgaatattaaaaagagt 16436219  T
Q  126 gtt 128  Q
    |||    
T  16436220 gtt 16436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 34882303 - 34882246
Alignment:
Q  77 taaacccacaatgatttaaaccaataagagagtgagtatt--agagagagtgttgcta 132  Q
    |||| |||||||||||||||||||||||||||||||| ||  | ||||||||||||||    
T  34882303 taaatccacaatgatttaaaccaataagagagtgagtgttgaaaagagagtgttgcta 34882246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 12785069 - 12784982
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagaga 107  Q
    |||||| || ||| ||||||||||  |||||||| |||  |||| |||| ||| ||||| | ||| ||||||||||||||||||||||    
T  12785069 tattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagaga 12784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 6531428 - 6531378
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttcc 70  Q
    |||||| |||||| |||||||||||||||||||| |||| |||| ||||||    
T  6531428 tattgggtgaaatcaatgtatgtcccactactttatgtgagttccatttcc 6531378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 17144801 - 17144695
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| ||| ||||| ||||   |||||||  |||  |||| ||| ||||| |||||||||||||||||| |||||  |||| ||||||| |    
T  17144801 tattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaactaataaaggagtaagtattaaa 17144702  T
Q  120 gagagtg 126  Q
    |||||||    
T  17144701 gagagtg 17144695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 373518 - 373571
Alignment:
Q  88 tgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctc 141  Q
    |||||| | ||||||| | ||| ||| |||||||||||||||||||||||||||    
T  373518 tgattttatccaataaaatagtaagtgttagagagagtgttgctaacactcctc 373571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 12690302 - 12690387
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt-aaacccacaatgatttaaaccaataag 104  Q
    |||||||||||||||||| ||||| ||| |||||  |||   ||||||||||| |||| | ||||||  |||||||||||||||||    
T  12690302 tattggatgaaattaatgcatgtctcaccactttaagtggaatctatttccaaagtgtgagacccaccttgatttaaaccaataag 12690387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 10981565 - 10981676
Alignment:
Q  17 ttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatt 116  Q
    |||||||| ||||||  |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10981565 ttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtatt 10981664  T
Q  117 agagagagtgtt 128  Q
    |||| |||||||    
T  10981665 agagggagtgtt 10981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 12989242 - 12989349
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    |||||||||||| |||||||||||||| ||||||| ||  |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12989242 attggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagag 12989341  T
Q  121 agagtgtt 128  Q
    ||||||||    
T  12989342 agagtgtt 12989349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 9470131 - 9470233
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||||| || |||| |||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  9470131 tattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgaatattaga 9470230  T
Q  120 gag 122  Q
    |||    
T  9470231 gag 9470233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 38464213 - 38464321
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| |||||||||| ||  |||||| ||| |||| |||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||    
T  38464213 tattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtattaga 38464312  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  38464313 gagagtgtt 38464321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 26767888 - 26767783
Alignment:
Q  23 tggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagag 122  Q
    |||||||||| |||||||||||||| |||||||| | |||| |||| |||  |||| || ||||||||||||||||||||| ||||||||||||||| ||    
T  26767888 tggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtattagatag 26767789  T
Q  123 agtgtt 128  Q
    ||||||    
T  26767788 agtgtt 26767783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 44274285 - 44274387
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    ||||||| |||| |||||||||||||| |||||||||| |||| | || ||| ||||| | |||||||||||||||||||||| ||||||||| ||||||    
T  44274285 attggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaaccaataacagagtgagtgttagag 44274384  T
Q  121 aga 123  Q
    |||    
T  44274385 aga 44274387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 34142269 - 34142172
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| |||| ||| ||||| |  ||||||| ||||||||||||||||||||| |||||    
T  34142269 tattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggtttaaaccaataagagagtgaatatta 34142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 6980250 - 6980142
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || |||||| | || |||||||||| |||| |||| ||| || || |||||||||||||| ||| |||||||||||||||||||||    
T  6980250 tattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgatttcaactaataagagagtgagtattaga 6980151  T
Q  120 gagagtgtt 128  Q
    || ||||||    
T  6980150 gaaagtgtt 6980142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 11539473 - 11539583
Alignment:
Q  20 tattggatgaaattaat--gtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaat-gatttaaaccaataagagagtgagtatt 116  Q
    ||||||||||||| |||  |||||| |||  |||||||||| ||||||||| ||| ||||| | ||| ||| ||||||||||||||||||||||||||||    
T  11539473 tattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtatt 11539572  T
Q  117 agagagagtgt 127  Q
    |||||||||||    
T  11539573 agagagagtgt 11539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36471968 - 36471863
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||| ||| ||||| | ||  ||| |||| |||  ||||||| ||||||||||||||||||||| |||||||||||||||    
T  36471968 tattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattaga 36471869  T
Q  120 gagagt 125  Q
    ||||||    
T  36471868 gagagt 36471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 37652375 - 37652267
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||||||||| ||||  |||||||| ||||| |||||||| ||||| |  ||||||||||||||||||||| | ||||| ||| |||    
T  37652375 tattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatttaaaccaataaaaaagtgaatataaga 37652276  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  37652275 gagaatgtt 37652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 4552926 - 4552875
Alignment:
Q  64 tatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  4552926 tattttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtat 4552875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 45554617 - 45554717
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||||        | |||| | | ||||| |||||||||||||||||||||||||| |||||||||||||    
T  45554617 tattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattaga 45554708  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  45554709 gagaatgtt 45554717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 15884498 - 15884580
Alignment:
Q  39 atgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    ||||||||| |||||||||| |||| |||| |||  |||| ||||||||| |||||||||||||||| | |||||||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataagataatgagtattagaga 15884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 472275 - 472187
Alignment:
Q  38 tatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtg 126  Q
    |||||| || ||||||||||| |||| |||| |||  | || | ||||||||||||||||||||||||||| |||||||| ||||||||    
T  472275 tatgtctcattactttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaagagagtg 472187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 32856261 - 32856157
Alignment:
Q  24 ggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||||||||||| |||||  ||| |||||||||| |||  |||| ||| ||||| | ||| | |||||||||||||||||||| ||||||||||| ||     
T  32856261 ggatgaaattaatatatgtttcaccactttgtgtgggttgaattttcaaagtgtagatccatagtgatttaaaccaataagagattgagtattagaaagg 32856162  T
Q  124 gtgtt 128  Q
    |||||    
T  32856161 gtgtt 32856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 36094098 - 36094006
Alignment:
Q  36 tgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||||||| |||||| |||| |||  ||||||||  |||||| ||||| |||||||||||||||| ||||||| | ||||||| ||||||    
T  36094098 tgtatgtcccattactttatgtgggtttcatttccaaattgtaaatccacattgatttaaaccaataaaagagtgaatgttagagaaagtgtt 36094006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 7919382 - 7919311
Alignment:
Q  38 tatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagt 109  Q
    |||||||||| ||||||||||  ||| |||| ||| ||||| | ||||||||||||||||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 12098997 - 12098894
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaa-tgatttaaaccaataagagagtgagtattag 118  Q
    |||| |||||||| || ||||||| | | ||||||| || |||| |||| ||| |||||||| ||||| |||||||||| |||||||||||||||||||     
T  12098997 tatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaattttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtattaa 12098898  T
Q  119 agag 122  Q
    ||||    
T  12098897 agag 12098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 45270686 - 45270603
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||||||| ||||||||||||||  ||||| ||||||||  ||| ||||  || |||||||| |||||||||||||||||||||    
T  45270686 tattggataaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgtaaactcacaatgatttaaaccaataa 45270603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 19639143 - 19639245
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| |||||||||| ||  || | ||||| |||| |||| ||| ||| | ||| |||||||||||||||||||||||||||| ||||| |    
T  19639143 tattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattata 19639242  T
Q  120 gag 122  Q
    |||    
T  19639243 gag 19639245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 19837736 - 19837838
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| |||||||||| ||  || | ||||| |||| |||| ||| ||| | ||| |||||||||||||||||||||||||||| ||||| |    
T  19837736 tattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattata 19837835  T
Q  120 gag 122  Q
    |||    
T  19837836 gag 19837838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 24497242 - 24497344
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||||||| |||||||||| |||  | ||||||||  || ||||| ||| ||||| ||| | | |||||||||| |||| ||||||||||||||||    
T  24497242 tattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaaactaataggagagtgagtattaga 24497341  T
Q  120 gag 122  Q
    |||    
T  24497342 gag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 32701520 - 32701617
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    |||||||| |||| ||||||| |||||| ||||| ||| ||||| ||||  || ||||||| ||| |||||||||||||||||| | ||| |||||||    
T  32701520 tattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataatgatttaaaccaataaaaaagtaagtatta 32701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 18511339 - 18511255
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataag 104  Q
    |||||||| |||| |||||||||||||||| ||| |||| |||| |||| ||| ||| | ||| |||||| ||||||||||||||    
T  18511339 tattggataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 30718426 - 30718350
Alignment:
Q  51 tttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgt 127  Q
    ||||||||  || ||||| ||| ||||| || ||||||||||||||||||||| | ||||| |||||||||||||||    
T  30718426 tttgtgtggattgtattttcaaagtgtagactcacaatgatttaaaccaataaaaaagtgaatattagagagagtgt 30718350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 33678206 - 33678138
Alignment:
Q  60 gttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||| |||||||| || |||||| |||||||||||||| | ||||| |||||||||| |||||    
T  33678206 gttctatttcaaatgtgtagactcacaataatttaaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 35316531 - 35316436
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    |||| ||| ||||||||||||||||||| | ||| |||   ||| ||||  ||  |||| ||||||||||||||||| ||||||||||||||||||    
T  35316531 tattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagagtgagtat 35316436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 37078010 - 37078128
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||||||| ||||| |||||||||||| |||||  |||   || ||||||||||||| | ||||||  | ||||||||||||||   ||||||| || |    
T  37078010 tattggatgtaattagtgtatgtcccaccactttaagtggaatccatttccaatgtgtgagacccaccttaatttaaaccaataatgaagtgagtgtttg 37078109  T
Q  119 agagagtgttgctaacact 137  Q
    |||||||||||||| ||||    
T  37078110 agagagtgttgctagcact 37078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 6420583 - 6420475
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||| ||||||||||||||| ||||| | |||  |||    |||||||||||||| | |||||| ||||||||| ||||||||| |||||||  | ||    
T  6420583 tattgggtgaaattaatgtatgacccaccattttaagtgaaacctatttccaatgtg-agacccaccatgatttaagccaataagaaagtgagtggtgga 6420485  T
Q  120 gagagtgttg 129  Q
    ||||||||||    
T  6420484 gagagtgttg 6420475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 25238372 - 25238299
Alignment:
Q  55 tgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||| ||||||||| ||| ||||| | |||||||||||||||||||||| | |||||||  |||||| ||||||    
T  25238372 tgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtgtt 25238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 25730569 - 25730472
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||| |||  ||||||||| ||| |  || |||| |||||||||  || |||||||| |||| |||||||||||||||| ||||||| |||||    
T  25730569 tattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcacagtgatttaaaccaataaaagagtgaatatta 25730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 30849287 - 30849384
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    |||| |||||||| |||||| ||||||| | ||||| || |||||||||  || |  |||| ||||||||||||||| |||||||| |||| ||||||    
T  30849287 tattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatta 30849384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 24895394 - 24895291
Alignment:
Q  23 tggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    ||||| |||| ||||||| | |||| | ||| |||| |||| |||||||| |||||  ||||||| |||||||| ||||| | ||||||||| |||||||    
T  24895394 tggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaagagtgagtgttagaga 24895295  T
Q  122 gagt 125  Q
    ||||    
T  24895294 gagt 24895291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 2122849 - 2122939
Alignment:
Q  24 ggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagta 114  Q
    ||||||||| |||||||||  ||| ||||||| ||  ||||||||| |  ||||||   ||| |||||||||| |||||||||||||||||    
T  2122849 ggatgaaatcaatgtatgtatcaccactttgtatgcattctatttctagagtgtaagttcactatgatttaaatcaataagagagtgagta 2122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 28898167 - 28898073
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagt 113  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||  |||||||| ||||| | || ||| |||||| | ||||||| |||||||||    
T  28898167 tattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaagagtgagt 28898073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 42182939 - 42182997
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||    
T  42182939 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgta 42182997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 43414405 - 43414503
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||||||||||| ||||||||| | || | |||| ||  || |||||| ||  || || | ||||||||||||||||||| ||||| |||||||||||    
T  43414405 tattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagtattag 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 3804634 - 3804747
Alignment:
Q  20 tattggatgaaattaatgtatgtcccact-actttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||||||||||| ||||||||||||  | ||||| |||  |||  |||| ||| ||||| ||||||||| |||||||  ||||| | ||| |||||||     
T  3804634 tattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttcaaagtgtacacccacaataatttaaattaataaaatagtaagtattat 3804733  T
Q  119 agagagtgttgcta 132  Q
    | ||||||||||||    
T  3804734 aaagagtgttgcta 3804747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 27494521 - 27494480
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||| |||||||||||| |||||| |||||||||||||||||    
T  27494521 acccgcaatgatttaaatcaataaaagagtgagtattagaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 31494256 - 31494289
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactacttt 53  Q
    |||||||||||| |||||||||||||||||||||    
T  31494256 tattggatgaaaataatgtatgtcccactacttt 31494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 38104298 - 38104403
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| ||||||||| |||| ||||| | || |||| ||| |||| |||||  ||||||| ||| ||||  |||| ||||||||||| ||||    
T  38104298 tattggataaaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattgaattaattcaatgagagagtgagtgttag 38104397  T
Q  119 agagag 124  Q
    ||||||    
T  38104398 agagag 38104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 17188115 - 17188211
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatt 116  Q
    ||||||||||||| ||||| | || ||| ||||||||||   || |||| ||| |||||  |||| |||||||||||||||||| | | ||||||||    
T  17188115 tattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgtaggcccagaatgatttaaaccaataaaataatgagtatt 17188211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 27862 - 27970
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| ||| |||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |    
T  27862 tattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaa 27961  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  27962 gagagtgtt 27970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 18427280 - 18427172
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  18427280 tattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 18427181  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  18427180 gagggtgtt 18427172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 52124084 - 52123978
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||||||||||||||||||||||||||| |||||| | |||| |||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  52124084 ttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagaga 52123985  T
Q  122 gagtgtt 128  Q
    |||||||    
T  52123984 gagtgtt 52123978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 41452025 - 41451917
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||||||| |||||||||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  41452025 tattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagacccacaatgatttaaaccaataagagagtgagtattaga 41451926  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  41451925 gagagtgtt 41451917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 46450115 - 46450224
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactacttt-gtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||| |||| ||| |||||||||||||| ||||| ||||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  46450115 tattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattag 46450214  T
Q  119 agagagtgtt 128  Q
    ||||||||||    
T  46450215 agagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 55452145 - 55452024
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| |||  ||||||||||||| |||||||||| ||||||||||||| ||||| || || |||||||||||||||| | |||||||||||||||    
T  55452145 tattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtattaga 55452046  T
Q  120 gagagtgttgctaacactcctc 141  Q
    ||||||||||||| || |||||    
T  55452045 gagagtgttgctagcattcctc 55452024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 20791346 - 20791454
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||||| ||||| | || ||||||||||||||||||||| |||||||||||||    
T  20791346 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattaga 20791445  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  20791446 gagagtgtt 20791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 24734755 - 24734863
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||||||| |||||||||| |||| |||| ||| | |||  |||||||||||||||||||||||||||||||||||||||    
T  24734755 tattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtattaga 24734854  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  24734855 gagagtgtt 24734863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 28529303 - 28529409
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| |||  ||||| |||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  28529303 tattggatgaaatcaatgtatgtcccaccact--gtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 28529400  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  28529401 gagggtgtt 28529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 20493575 - 20493467
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||||||| || |||||||| | |||| || | ||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20493575 tattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaataga 20493476  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  20493475 gagagtgtt 20493467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 46160997 - 46161104
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||  |||||| || |||||||||  ||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||    
T  46160997 tattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaaccaataagagagtgagtattaga 46161096  T
Q  120 gagagtgt 127  Q
    ||||||||    
T  46161097 gagagtgt 46161104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 2419594 - 2419486
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| ||| |||| |||||| || ||||||  || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |    
T  2419594 tattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtattaaa 2419495  T
Q  120 gagagtgtt 128  Q
    || ||||||    
T  2419494 gaaagtgtt 2419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 37776833 - 37776725
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||||||||||| || |||||||||| |||| |||| ||| ||||| ||| |||||||||||||||| |||||||||||||||||||    
T  37776833 tattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatttaaaccactaagagagtgagtattaga 37776734  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  37776733 gagggtgtt 37776725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 10948690 - 10948588
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||| || |||||||||||| |||| ||||||||| ||||| ||||  || |||||||||||||||||||||||||||||| ||||||||||||| |    
T  10948690 tattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaa 10948591  T
Q  120 gag 122  Q
    |||    
T  10948590 gag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 50156790 - 50156682
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||||||||||||| |||| |||||| | | |||| ||||  || ||||| |||||||||||||||||||||||||||||||||||||| |    
T  50156790 tattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaca 50156691  T
Q  120 gagagtgtt 128  Q
     ||||||||    
T  50156690 aagagtgtt 50156682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 14236069 - 14236177
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||||||| ||||| || | ||||||||||||| ||||| | ||||||| ||||| |||||||| | |||||||||||||    
T  14236069 tattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagaccaataaaaaagtgagtattaga 14236168  T
Q  120 gagagtgtt 128  Q
     ||||||||    
T  14236169 aagagtgtt 14236177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 752461 - 752539
Alignment:
Q  39 atgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||| |||||||||| |||||||||| || ||||| |||||||||||||||||| ||||||||| |||||||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 27243095 - 27243204
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| |||| ||||||||| ||||| |||| |||| |||||||| |||||  ||||||| |||||||| ||||| ||||||||||||||||    
T  27243095 tattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattag 27243194  T
Q  119 agagagtgtt 128  Q
    | ||||||||    
T  27243195 aaagagtgtt 27243204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 29588863 - 29588755
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||||||||||    ||||| |||| |||| |||| ||| ||||| ||||||||||||||||| |||||||||||||||| ||| |    
T  29588863 tattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagtgttata 29588764  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  29588763 gagagtgtt 29588755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 41387611 - 41387726
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| ||||  |||||| || ||||| |||||||| |||  |||| ||| ||| | |||||||||||||||| | ||||||||| |||||||| ||    
T  41387611 tattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaagtgcagacccacaatgatttaatcaaataagagattgagtattgga 41387710  T
Q  120 gagagtgttgctaaca 135  Q
    ||||||||||||||||    
T  41387711 gagagtgttgctaaca 41387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 742025 - 742103
Alignment:
Q  39 atgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||| ||||||||||  ||||||||| || ||||| |||||||||||||||||| ||||||||| |||||||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 48351486 - 48351587
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||| |||||| |||||||||||||| |||| |||| ||| ||||| | ||| ||||||||||| ||||||||||  ||||||||||    
T  48351486 tattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtatatccataatgatttaaatcaataagagaaagagtattaga 48351585  T
Q  120 ga 121  Q
    ||    
T  48351586 ga 48351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 8825109 - 8825001
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||| |||||||||| | ||| || | |||| |||| ||| || || || |||||| |||||||||||||||||||||||||||| |    
T  8825109 tattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataagagagtgagtattaaa 8825010  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  8825009 gagagtgtt 8825001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 22604610 - 22604710
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| ||||||||||||||||||| | |||||| | |||| |||| |||  |||| || |||||||||||||||  ||||||||||||| ||||||    
T  22604610 tattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaacttataagagagtgagaattaga 22604709  T
Q  120 g 120  Q
    |    
T  22604710 g 22604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 19345130 - 19345032
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||||||||||| |||||||||||||| |||||||  | |||| |||| |||  |||| || ||||||||||||||||||||| ||| | ||||||||    
T  19345130 tattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataagtattag 19345032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 5452190 - 5452084
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||| |||||| ||||||||||  ||| |||| | | ||||| |||||  | |||||||| ||||||||||| ||||||| ||    
T  5452190 tattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtagaccca--aggatttaaatcaataagagagcgagtattgga 5452093  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  5452092 gagagtgtt 5452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 49072057 - 49072138
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    ||||||||||||||| |||||| ||| ||||||| || ||| ||||| ||| ||||| ||||||||| ||||||||||||||    
T  49072057 ttggatgaaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 29755575 - 29755658
Alignment:
Q  45 cactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||| |||| |||| ||| ||||| | | ||||||||||||||||||||||| ||  ||||||||| |||||||    
T  29755575 cactactttgtgtgggttcaattttcaaagtgtagatcaacaatgatttaaaccaataagagggtaggtattagagggagtgtt 29755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 24429093 - 24429043
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagtgttgcta 132  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  24429093 ccacaatgatttaaaccaataaaatagtgagtattagagagagtattgcta 24429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 39186025 - 39186119
Alignment:
Q  31 attaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    ||||||||||||| ||| ||||| || | ||||||||||||| ||||| | |  |||||||||||| ||||||||||| | ||||| ||||||||    
T  39186025 attaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagt 39186119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 15790434 - 15790397
Alignment:
Q  86 aatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15790434 aatgatttaaaccaataagagagtgagtattagagaga 15790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 26310576 - 26310495
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaat 101  Q
    ||||||||||||| |||||||||||||| | ||| |||  |||| |||| ||| ||||| ||||| ||||||||||||||||    
T  26310576 tattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 46575998 - 46576108
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaaccc-acaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||  |||||||||||||| ||||| |||| |||| |||| |||  ||||  ||| ||| |||||||| || || |||||||||||||||     
T  46575998 tattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaa 46576097  T
Q  119 agagagtgttg 129  Q
    |||||||||||    
T  46576098 agagagtgttg 46576108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 38414711 - 38414800
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    |||||||||||||| | |||||||| |||  ||||  || ||||| | |||| || |||||||||||||||||||||||| ||| |||||    
T  38414711 aatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagaga 38414800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 138813 - 138921
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| |||||||||| ||| | ||||| ||| ||| ||||  ||  |||||||  ||||||||||||| |||||| ||||| ||||||| |    
T  138813 tattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatcaataaaagagtaagtattaaa 138912  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  138913 gagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 13809131 - 13809239
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| |||||||||||||| | ||| |||| |||| |||||||| || ||  ||||||| || ||||| ||||||||||| ||| | ||||    
T  13809131 tattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatgacccacattgttttaacccaataagagaatgaatgttag 13809230  T
Q  119 agagagtgt 127  Q
    ||| |||||    
T  13809231 agaaagtgt 13809239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 29388684 - 29388616
Alignment:
Q  60 gttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||| |||| ||| ||||| || |||||||||||||  ||||||||||||| || ||||||||||||||    
T  29388684 gttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgtt 29388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 44844031 - 44844139
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||| || |||| |||||||||||||| | ||  |||| |||| ||||  || |||||  |||||||||||||||| ||||||| | ||||||| ||||    
T  44844031 tattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagtgttag 44844130  T
Q  119 agagagtgt 127  Q
    |||||||||    
T  44844131 agagagtgt 44844139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 28576143 - 28576104
Alignment:
Q  96 accaataagagagtgagtattagagagagtgttgctaaca 135  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  28576143 accaataagagagtaagtattagagagagtgttgttaaca 28576104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 38138650 - 38138615
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtatta 117  Q
    |||||||||||||||||||||||||||| |||||||    
T  38138650 ccacaatgatttaaaccaataagagagtaagtatta 38138615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43657126 - 43657068
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||| |||||||| |||||||||||||| ||||| |||| |||| |||||||| |||||    
T  43657126 tatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgta 43657068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 37285338 - 37285435
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagag 122  Q
    ||||||||| ||||||||| ||| | ||| | || ||| |||||  || ||| | ||||||||| |||||||||||||| | ||| ||||||||||||    
T  37285338 gatgaaattcatgtatgtcgcaccattttttatgggttttatttttaaagtgcagacccacaataatttaaaccaataaaaaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 46237176 - 46237127
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttc 69  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  46237176 tattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttc 46237127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 8109006 - 8109114
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||| |||||| |||||||||||||||| ||||||| ||||| |||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  8109006 tattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattaga 8109105  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  8109106 gagagtgtt 8109114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 722207 - 722315
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||||||| |||||||||  |||| ||||  || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  722207 tattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 722306  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  722307 gagagtgtt 722315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 43771176 - 43771284
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||| |||||| |||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |    
T  43771176 tattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaa 43771275  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  43771276 gagggtgtt 43771284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 754710 - 754602
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||| | || ||||||||||| |||||||||  |||| ||||  || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  754710 tattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 754611  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  754610 gagagtgtt 754602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 39471207 - 39471315
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| |||||||||||||| |||||||||  |||| || | ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  39471207 tattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattaga 39471306  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  39471307 gagaatgtt 39471315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 24834628 - 24834732
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| ||| |||||||||||||| | |||||||| |||| |||| ||| ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  24834628 tattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgactattaga 24834727  T
Q  120 gagag 124  Q
    |||||    
T  24834728 gagag 24834732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 34129534 - 34129429
Alignment:
Q  16 cttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||||| |||| ||| ||||  || ||||||| ||||||||||||| |||||||||||    
T  34129534 cttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaagagtgagtat 34129435  T
Q  116 tagaga 121  Q
    ||||||    
T  34129434 tagaga 34129429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 49242221 - 49242328
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    |||||||||||| ||| |||||||||  |||||||||| |||| |||| ||||||||| |  ||||||||||||||||||||||||| ||||||| | ||    
T  49242221 attggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaatgagtatcatag 49242320  T
Q  121 agagtgtt 128  Q
    ||||||||    
T  49242321 agagtgtt 49242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 26361438 - 26361330
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||| | |||||||| ||||| | |||||||| |||| || | ||| ||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  26361438 tattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtgagtattaga 26361339  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  26361338 gagggtgtt 26361330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 47009239 - 47009347
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||||||||| |||| |||  ||||||||| |||| |||| ||| ||||| |  ||||||||||||||||||||||| |||||||||||||    
T  47009239 tattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatttaaaccaataagaaagtgagtattaga 47009338  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  47009339 gagggtgtt 47009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 50164445 - 50164553
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||||||| |||||| | |||||| | |||| |||| ||| ||||| || ||||||||||||||||||||||| |||||| ||||||    
T  50164445 tattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcattaga 50164544  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  50164545 gagagtgtt 50164553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 20225471 - 20225354
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| |||  ||| ||||||||| ||||| |||| ||||||||||||| ||||| || |||||||||||||||||||||||||| | ||   | |    
T  20225471 tattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaaccaataagagagagtgttcaaaa 20225372  T
Q  120 gagagtgttgctaacact 137  Q
    ||||||||||||| ||||    
T  20225371 gagagtgttgctagcact 20225354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 24938545 - 24938436
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| ||| |||||||||||||| | ||||| ||  ||| ||||  || ||||| ||| |||||||||||||||||||||||||| |||||||||    
T  24938545 tattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagagagtaagtattaga 24938446  T
Q  120 gagagtgttg 129  Q
    || |||||||    
T  24938445 gaaagtgttg 24938436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 13520008 - 13520084
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||| ||||||||| |||| |||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  13520008 aaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 13520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 25719243 - 25719141
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||  ||||||||  ||||  |||||||||||||||| ||||| ||||||||||||||||    
T  25719243 tattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtgagtattag 25719144  T
Q  119 aga 121  Q
    |||    
T  25719143 aga 25719141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 49077299 - 49077385
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagag 106  Q
    |||| ||| |||||||| |||||||||| |||||||||| |||| ||||  || ||||| |||||||||||||||||||||||||||    
T  49077299 tattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagag 49077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 50481675 - 50481560
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||| ||| ||||||| ||  |||||||| ||| ||||| || |||||| ||||||||||||||||||||||    ||||    
T  50481675 tattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagagagtga--tctaga 50481578  T
Q  120 gagagtgttgctaacact 137  Q
    ||||||||||||| ||||    
T  50481577 gagagtgttgctagcact 50481560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 54543428 - 54543514
Alignment:
Q  60 gttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctcttttt 146  Q
    ||||||||||||||||||| |  || |||||||||||||||||| | |  ||||||||||||||||||||||| ||||| |||||||    
T  54543428 gttctatttccaatgtgtagattcaaaatgatttaaaccaataaaaaaaagagtattagagagagtgttgctagcactcatcttttt 54543514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 33653619 - 33653510
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| |||||||||||||| | |||||| |  ||| |||| |||  | |  | |||||||||||||||||||||||| |||||||||||||    
T  33653619 tatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtattaga 33653520  T
Q  120 gagagtgttg 129  Q
    ||||||||||    
T  33653519 gagagtgttg 33653510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 22542431 - 22542539
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| || |||||| |||| |||||||||| |||| |||| ||| |  ||  ||||||||||||||||| ||||||||||||||||||| |    
T  22542431 tattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgagtattaaa 22542530  T
Q  120 gagagtgtt 128  Q
     ||||||||    
T  22542531 aagagtgtt 22542539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 46287491 - 46287587
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatt 116  Q
    ||||||||||||||||| ||||||  |||||||||||||| ||| |||| ||| ||||  || |||||||||||||||||||| || |||| |||||    
T  46287491 tattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttgactcacaatgatttaaaccaatacgaaagtgggtatt 46287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 52671880 - 52671988
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | ||| |||  |||| ||||  || |||||||  | ||||||||||||| ||||||| ||||||||||| |    
T  52671880 tattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtgagtattaaa 52671979  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  52671980 gagagtgtt 52671988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 29699539 - 29699645
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||  ||||||||| |||||||||  |||||||||| || || ||  || ||||||||||||| |||||||||||||| |||||||    
T  29699539 tattggatgaaatcaatacatgtcccaccactttgtgttggttctatttcaaa-gtatagcccgacaatgatttaaaacaataagagagtgaatattaga 29699637  T
Q  120 gagagtgt 127  Q
     |||||||    
T  29699638 tagagtgt 29699645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 40991718 - 40991611
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    |||||||||||| ||| ||||||||||  | |||| |  |  |||||||  | ||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  40991718 attggatgaaatcaatatatgtcccaccccattgtattggcactatttctgaagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagag 40991619  T
Q  121 agagtgtt 128  Q
    ||||||||    
T  40991618 agagtgtt 40991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 5044670 - 5044568
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||| ||||| |||||||| |||| ||||  ||  |||| |||||||| ||||||||||||||| ||| ||| |||||||    
T  5044670 tattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatgaatattaga 5044571  T
Q  120 gag 122  Q
    |||    
T  5044570 gag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 45311078 - 45310976
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||||||| |||||||| |  ||| |||| ||| ||| | ||  ||||||||||||| |||||||||||| |||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  120 gag 122  Q
    |||    
T  45310978 gag 45310976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 16178640 - 16178756
Alignment:
Q  27 tgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaaccc-acaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||    | ||| |||||| | ||||||| ||||||||  |||||||||||    
T  16178640 tgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggttctacattgatttcatccaataaaagagtgagagttagagagagt 16178739  T
Q  126 gttgctaacactcctct 142  Q
    ||||||| |||||||||    
T  16178740 gttgctagcactcctct 16178756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 20454590 - 20454696
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| ||| |||| ||||||||||| || |||||||||  |||| |||| ||| ||||| | ||||||||||||||| |||||| ||||||||| |||||    
T  20454590 tattagataaaatcaatgtatgtcc-ac-actttgtgttggttcaattttcaaagtgtagatccacaatgatttaaatcaataacagagtgagtgttaga 20454687  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  20454688 gagagtgtt 20454696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 45081841 - 45081773
Alignment:
Q  51 tttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| || |||||||||| ||||| || |||||| |||||||||||||| |||||||||||||||    
T  45081841 tttgtgtgggtcctatttccaaagtgtacactcacaataatttaaaccaataaaagagtgagtattaga 45081773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 41153328 - 41153245
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||||||||||||| ||| ||||||||| |||||||||  |||||||||| || ||||| |  |||||||||||| ||||||||    
T  41153328 tattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttagaccaataa 41153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 1560026 - 1559936
Alignment:
Q  38 tatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||| ||| |||| ||||||||||| | ||||| || || |||||||||||||||||||| | | | |||||| |||||||||    
T  1560026 tatgtcccactaatttttgtgagttctatttcctaggtgtagactcaaaatgatttaaaccaataagaaattcaatattagtgagagtgtt 1559936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 37451108 - 37451042
Alignment:
Q  55 tgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||| ||||||||| ||| ||||| || | ||||||||||||||||||| |||||||||||||||||    
T  37451108 tgtgagttctattttcaaagtgtagactcgcaatgatttaaaccaataaaagagtgagtattagaga 37451042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 10169775 - 10169678
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||| ||| ||||||| || |||||||||| |||| |||| |||    || | ||||||| |||||||||||||||||||||| |||||    
T  10169775 tattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccacaattatttaaaccaataagagagtgaatatta 10169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 43124641 - 43124536
Alignment:
Q  23 tggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagag 122  Q
    |||||||||| |||||||||||||| | |||||||  | | ||||| |||  |||| |||||  | |||||||||||||||||||||| |||||| | ||    
T  43124641 tggatgaaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaataagagagtgcgtattataaag 43124542  T
Q  123 agtgtt 128  Q
    ||||||    
T  43124541 agtgtt 43124536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 31251013 - 31250907
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagta-ttag 118  Q
    ||||||||||||| |||||||||||||| | ||| ||   |||| |||| |||  |||| ||||||||||||||||| |||||| ||||| | || ||||    
T  31251013 tattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaatatttag 31250914  T
Q  119 agagagt 125  Q
    |||||||    
T  31250913 agagagt 31250907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 48339470 - 48339380
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtg 110  Q
    |||||||  |||| ||||||||| |||| |||||||||| |||| |||| ||| | ||| ||||| |||| ||||||||||||| ||||||    
T  48339470 tattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 48339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 19321946 - 19321901
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||    
T  19321946 acccgcaatgattcaaaccaataagagagtaagtattagagagagt 19321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 19447181 - 19447290
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||  |||||||||||||| ||||| |||| |||| |||| |||  || |  ||| ||||||||||||  |||| |||||||||||||||     
T  19447181 tattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagtattaa 19447280  T
Q  119 agagagtgtt 128  Q
    ||||||||||    
T  19447281 agagagtgtt 19447290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 46536384 - 46536295
Alignment:
Q  28 gaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||| ||| ||||||  || ||||||||| ||||| |||| ||| ||||||||||||| |  |||||| |||||||||||||| |||||    
T  46536384 gaaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatta 46536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 22592354 - 22592406
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaa 72  Q
    ||||||||||||| ||||| |||||||| |||||||||  |||||||||||||    
T  22592354 tattggatgaaataaatgtttgtcccaccactttgtgtaggttctatttccaa 22592406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 4138915 - 4139002
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagaga 107  Q
    ||||||||||||| |||||||||||||| |  || | ||  |||||||||||| ||||| || | |||| ||||||| ||||||||||    
T  4138915 tattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaatcaataagaga 4139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 19937301 - 19937194
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    |||||||  ||| |||||||||||||| | | | |||| ||||||||| ||| || || | | ||||||||| ||||||| || |||||||| |||| ||    
T  19937301 attggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaattaaag 19937202  T
Q  121 agagtgtt 128  Q
    ||||||||    
T  19937201 agagtgtt 19937194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 49769934 - 49769851
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    ||||||||||||| ||  ||| |||||||| ||| |||| ||| ||||| ||| || |||||| |||||||||||||| |||||    
T  49769934 tattggatgaaatcaaaatatatcccactattttatgtgagttttattttcaaagtataaacctacaatgatttaaactaataa 49769851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 30867062 - 30867004
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||||| ||||||||||||||||||| ||||| |||| |||| |||| ||| |||||    
T  30867062 tattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgta 30867004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 11895141 - 11895186
Alignment:
Q  74 gtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| |||||||||||||| ||| |||||||||||||||| ||||    
T  11895141 gtgtagacccacaatgatttgaacgaataagagagtgagtaataga 11895186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 52279329 - 52279281
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||||||||||| | ||||| |||||||| ||||||| ||||||||    
T  52279329 acccacaatgatttagatcaataggagagtgaatattagatagagtgtt 52279281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 33008154 - 33008251
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  33008154 tattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataaaagagagagtatta 33008251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 27888333 - 27888438
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    ||||||| |||| |||||||||||||| |||||||||| |||| ||||  || ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27888333 attggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagag 27888432  T
Q  121 agagtg 126  Q
    ||||||    
T  27888433 agagtg 27888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 22189989 - 22190097
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| |||| ||| ||||| |||| |||||||||||||||||||  ||||||||||||||    
T  22189989 tattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtattaga 22190088  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  22190089 gagggtgtt 22190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 11824121 - 11824223
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||||   ||| |||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  11824121 tattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaagtgagtattaga 11824220  T
Q  120 gag 122  Q
    |||    
T  11824221 gag 11824223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 12263562 - 12263457
Alignment:
Q  24 ggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||| ||| |||||||||||||  |||||||||  | || |||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12263562 ggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtattagagaga 12263463  T
Q  124 gtgttg 129  Q
    ||||||    
T  12263462 gtgttg 12263457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 11692229 - 11692337
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||||||| || |||||||||  |||| |||| ||| |||||||| |||| |||||||||| |||| ||||||||||||||||    
T  11692229 tattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgagtattaga 11692328  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  11692329 gagtgtgtt 11692337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 27949323 - 27949431
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||  ||||||| || | |||||||| |||| | || ||| ||||| |||||||||||||||||| |||||||||||||||||||||    
T  27949323 tattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattaga 27949422  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  27949423 gagagtgtt 27949431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 48374569 - 48374461
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||| |||| ||| ||||||||| ||||| | || ||||||||||||| ||||| || |||||| ||||||||||| ||||||||||||||||||    
T  48374569 tattgaatggaattcatgcatgtcccaccactttctatgggttctatttccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattaga 48374470  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  48374469 gagagtgtt 48374461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 10934095 - 10933998
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    |||||||| |||||||| |||||| ||| ||||||| ||  |||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||    
T  10934095 tattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagtatta 10933998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 32212999 - 32212903
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||| ||||  ||  ||||  |||||||||||||||||||||||||||||||||||||    
T  32212999 tattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtatta 32212903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 7775050 - 7775157
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||| ||| ||||  | ||| |||||||||||| |||||| |||||| |||||||    
T  7775050 tattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatttaaacaaataagtgagtgaatattaga 7775148  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  7775149 gagagtgtt 7775157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 6580118 - 6580024
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||| |||||||||||||  |||| |||| |||  | |  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6580118 aatgtatgtctcactactttgtgtaggttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 6580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 31502594 - 31502504
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtg 110  Q
    ||||||||||||| || ||||||||||| | |||||||| |||| |||| ||| ||||| || ||||||||||||||||||||||||||||    
T  31502594 tattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 6442215 - 6442323
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| ||||||||| |||| | |||||| |  ||| |||| ||| ||||| |||||||||||||||||||||||| ||||||||||||| |    
T  6442215 tattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaa 6442314  T
Q  120 gagagtgtt 128  Q
    || ||||||    
T  6442315 gatagtgtt 6442323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 9648983 - 9649059
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||| ||||||||| |||| |||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9648983 aaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 14795181 - 14795289
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | ||| |||  |||| ||||  || ||||| | ||| |||||||||||| ||||||||||||||||| |||    
T  14795181 tattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataaga 14795280  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  14795281 gagagtgtt 14795289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 15242173 - 15242281
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | ||| |||  |||| ||||  || ||||| | ||| |||||||||||| ||||||||||||||||| |||    
T  15242173 tattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtataaga 15242272  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  15242273 gagagtgtt 15242281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 12167317 - 12167384
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctcttttta 147  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| | |||||||||    
T  12167317 acccacaatgatttaaaccaataagaaagtgagtattaaagagagtgttgttaacattactcttttta 12167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 46517341 - 46517443
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||||||| |||||| | | |||| | |||| |||| ||| ||||| || ||||||||||||||||||||||||| |||||||||||    
T  46517341 tattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagagaatgagtattaga 46517440  T
Q  120 gag 122  Q
    |||    
T  46517441 gag 46517443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 25686965 - 25686857
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||||||||||  || ||||| | || |||| |||| ||| ||||| |||||||||||||||||||||||||| | |||||||||||    
T  25686965 tatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattaga 25686866  T
Q  120 gagagtgtt 128  Q
     ||| ||||    
T  25686865 aagaatgtt 25686857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 32178933 - 32178826
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||||||||||||| |||| ||| ||| | | ||| |||| ||| ||||| || |||||||||||||| |||||||||||||| ||| |||    
T  32178933 tattggatgaaattaatgtatgttccaccactctgttt-tattcaattttcaaagtgtatacacacaatgatttaaatcaataagagagtgattatcaga 32178835  T
Q  120 gagagtgtt 128  Q
    |||| ||||    
T  32178834 gagattgtt 32178826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 23564156 - 23564037
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagag----agtgagtattagagagag 124  Q
    ||||||||||||||| ||| ||||||| || ||||||||| ||| ||||| | ||||  | |||||||||||||| ||    ||||||||| ||||||||    
T  23564156 aaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagtaagtgagtataagagagag 23564057  T
Q  125 tgttgctaacactcctcttt 144  Q
    |||||||| |||| ||||||    
T  23564056 tgttgctaccacttctcttt 23564037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32205126 - 32205228
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||||||| || | |||||||| |||| ||||  || || ||   | |||||||||||||| |||||||||||||||||||||    
T  32205126 tattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtataggtctacaatgatttaaactaataagagagtgagtattaga 32205225  T
Q  120 gag 122  Q
    |||    
T  32205226 gag 32205228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 1688035 - 1688127
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagta 114  Q
    |||||||||||| ||||||||| ||| ||||||  || ||| ||||||||| ||||| ||| |||| ||||||| ||||||| ||||||||||    
T  1688035 ttggatgaaattgatgtatgtctcaccactttgcatgagttttatttccaaagtgtagacctacaacgatttaacccaataaaagagtgagta 1688127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 39254133 - 39254241
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| || ||||||||||||||  ||| |||||||||  |||| ||||  ||  |||| ||||||||| ||||||| |||||||||||||||| ||| |    
T  39254133 tattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagacccacaataatttaaatcaataagagagtgagtgttaaa 39254232  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  39254233 gagagtgtt 39254241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 7774956 - 7775002
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||    
T  7774956 ccacaatgatttaaaccaataagagagtaaatattagagagagtgtt 7775002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 17354657 - 17354599
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| |||||    
T  17354657 tattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgta 17354599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 31874120 - 31874174
Alignment:
Q  74 gtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||| || |||||||||||||||| ||||||||||||||||| |||||||||||    
T  31874120 gtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 31731367 - 31731282
Alignment:
Q  38 tatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||| |||| ||||||||| ||||||||||||||  | || |||| | || |||||||||||||||| | |||||||||||||||    
T  31731367 tatgttccaccactttgtgtatgttctatttccaaaatatagacccgcgataatttaaaccaataagaaaatgagtattagagaga 31731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 44350932 - 44350831
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||||||||| |   ||||||| |  |||| |||| ||| ||||| || |||||||||||||||||| || |||||||||||||||    
T  44350932 tattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattaga 44350833  T
Q  120 ga 121  Q
    ||    
T  44350832 ga 44350831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 19422963 - 19422856
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgtt-ctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||||||| ||||||||||||||  | |||| | |||  |||||| | | ||||| | |||||||||||||||||||||| ||||||||||| |||    
T  19422963 attggatgaaatcaatgtatgtcccaccccattgtat-tgtcactattttcgaagtgtagatccacaatgatttaaaccaataaaagagtgagtatcaga 19422865  T
Q  120 gagagtgtt 128  Q
    || ||||||    
T  19422864 gatagtgtt 19422856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 24539253 - 24539145
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| ||| |||||||||| ||||| | ||  ||| ||||||||  ||||  ||||||| |||||||| ||||| ||||||||||| ||||    
T  24539253 tattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtgttag 24539154  T
Q  119 agagagtgt 127  Q
    |||||||||    
T  24539153 agagagtgt 24539145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 36845566 - 36845516
Alignment:
Q  75 tgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    |||| |||||||||||||||||||||||||||||||| ||||  |||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagt 36845516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 45909506 - 45909612
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| ||||||||  ||||   || ||| |||||| | ||||||| ||||||||| ||||    
T  45909506 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttag 45909605  T
Q  119 agagagt 125  Q
    |||||||    
T  45909606 agagagt 45909612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 1316387 - 1316424
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1316387 acaatgatttaaaccaataaaagagtgagtattagaga 1316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 38065388 - 38065347
Alignment:
Q  88 tgatttaaaccaataagagagtgagtattagagagagtgttg 129  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  38065388 tgatttaaaccaataagaaagtgagtatttgagagagtgttg 38065347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 17749744 - 17749852
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| ||| |||||||||| ||||| | ||  ||  ||||||||  ||||  ||||||| |||||||| ||||| ||||||||||| ||||    
T  17749744 tattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgatttaacccaatgagagagtgagtgttag 17749843  T
Q  119 agagagtgt 127  Q
    |||||||||    
T  17749844 agagagtgt 17749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 7459455 - 7459498
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||    
T  7459455 ccacaataatttaaaccaataaaagagtgagtattaaagagagt 7459498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 32943885 - 32943838
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagtgttg 129  Q
    |||||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  32943885 ccacaatgatataaactaataagatagtgggtattagagagagtgttg 32943838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 44511066 - 44510999
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaa 87  Q
    ||||||||||||| |||||||||| ||  ||||||| ||||||| |||| ||||||||| | ||||||    
T  44511066 tattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgtagatccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 25092786 - 25092708
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||| ||| ||||||||||| ||||||||||||| |||| |||| | | || || || |||||| ||||||||||||||    
T  25092786 gatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtatagacacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 36845621 - 36845567
Alignment:
Q  51 tttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||||||| |||| |||| ||| || || ||||||||||||||||||||||||||    
T  36845621 tttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 12271041 - 12271093
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||||| |||||||||||||| |||||||||| ||||||||| ||| |||||    
T  12271041 gatgaaatcaatgtatgtcccaccactttgtgtg-gttctattttcaaagtgta 12271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 30742655 - 30742562
Alignment:
Q  35 atgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||| ||||  ||||  ||| ||| |||||| ||| |||| ||| ||||||||||||| |||||||| | ||| |||||||| |||||||    
T  30742655 atgtatgtaccacgtctttaagtgggttttatttctaatatgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgtt 30742562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 31628116 - 31628157
Alignment:
Q  87 atgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||    
T  31628116 atgatttaaaccaataagagagtaagtattaaagatagtgtt 31628157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 25428602 - 25428502
Alignment:
Q  27 tgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    |||||| |||||||||||||| ||||| |||| |||  |||||||| ||||| | || ||| |||||| | ||||||| |||||||||  || |||||||    
T  25428602 tgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagt 25428503  T
Q  126 g 126  Q
    |    
T  25428502 g 25428502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 41958133 - 41958257
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||| | |||| |||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  41958133 tattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagagagtgagtattaga 41958232  T
Q  120 gagagtgttgctaacactcctcttt 144  Q
     ||||||||| || || ||||||||    
T  41958233 aagagtgttgttagcattcctcttt 41958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 8741353 - 8741252
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||| ||||| |||||||| |||| |||| ||| || ||||| ||||||||||||||| |||||||||||||||||||||    
T  8741353 tattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtgagtattaga 8741254  T
Q  120 ga 121  Q
    ||    
T  8741253 ga 8741252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 19101731 - 19101623
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||| ||| ||||| | |  ||||||||||||||||||||| |||||||||||||    
T  19101731 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgatttaaaccaataagaaagtgagtattaga 19101632  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  19101631 gagagtgtt 19101623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 33193100 - 33193208
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||||| |||| | |||||| | |||| |||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  33193100 tattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtattaga 33193199  T
Q  120 gagagtgtt 128  Q
    || ||||||    
T  33193200 gaaagtgtt 33193208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 30679038 - 30678935
Alignment:
Q  23 tggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagag 122  Q
    ||||| |||| |||||||||||||| |||||||||| |||| |||| ||| ||||| || ||||||||||||| ||||||||||||||||| ||||||||    
T  30679038 tggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgagtgttagagag 30678939  T
Q  123 agtg 126  Q
    ||||    
T  30678938 agtg 30678935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 26980392 - 26980283
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||||| |||| |||| |||  | || | ||||||||||||||| |||||||||||||||||||| |    
T  26980392 tattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattata 26980293  T
Q  120 gagagtgttg 129  Q
    ||||||||||    
T  26980292 gagagtgttg 26980283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 32211914 - 32211805
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||||||||||| ||||||||||||| |||| ||||  || ||||| ||||||||||||||||||||||||||||||||  |||| |    
T  32211914 tattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaaccaataagagagtgatcattaaa 32211815  T
Q  120 gagagtgttg 129  Q
    || |||||||    
T  32211814 gaaagtgttg 32211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 11987676 - 11987784
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||||||||||||| |||| |||| ||| | |||| |||| ||| ||||| |||||||||||||||||||| ||||||||||  |||||||    
T  11987676 tattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattaga 11987775  T
Q  120 gagagtgtt 128  Q
     ||||||||    
T  11987776 aagagtgtt 11987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 8899069 - 8899172
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagag 124  Q
    |||||||| || |||||||||||  ||||||||| |||| |||| ||| |||||   ||||||| |||||||||||||||||||||||||||||||||||    
T  8899069 gatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagag 8899168  T
Q  125 tgtt 128  Q
    ||||    
T  8899169 tgtt 8899172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 51732327 - 51732428
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||||||||||| | |||||||||| |||| |||  |||| ||| || |||||||||||| |||||||||||||| |||||||||||||||    
T  51732327 tatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaacccacaataatttaaaccaataaaagagtgagtattaga 51732426  T
Q  120 ga 121  Q
    ||    
T  51732427 ga 51732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 41948276 - 41948168
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||||||| | | || |||||||||  |||| |||| ||| ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  41948276 tattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagagtgagtgttaga 41948177  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  41948176 gagagtgtt 41948168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 2225274 - 2225369
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||  ||| ||| ||||| ||| ||| |||||||||||||||||| |||||||||    
T  2225274 tattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgagtat 2225369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 6133754 - 6133653
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||||||| |  ||||||| |||| |||| ||| || || ||||||||||||| ||||||||||||||||||||||||||    
T  6133754 tattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctacacccacaatgatt-aaaccaataagagagtgagtattaga 6133656  T
Q  120 gag 122  Q
    |||    
T  6133655 gag 6133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 37553079 - 37552977
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||||||||| |||||||  |||||  ||| ||| ||||| ||| ||||| | ||||||||||||||| |||||||||||||||||||| |    
T  37553079 tattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgatttaaatcaataagagagtgagtattaaa 37552980  T
Q  120 gag 122  Q
    |||    
T  37552979 gag 37552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 47644396 - 47644331
Alignment:
Q  51 tttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatt 116  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  47644396 tttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagtatt 47644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 10659894 - 10659791
Alignment:
Q  24 ggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||||||| |||| |||||| || |||||||||  |||| |||| ||| ||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  10659894 ggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtattagagaaa 10659796  T
Q  124 gtgtt 128  Q
    |||||    
T  10659795 gtgtt 10659791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 22540418 - 22540502
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataag 104  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||||| ||||| | || ||||||||||||||||||||    
T  22540418 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataag 22540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 25543390 - 25543497
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| ||| |||||||||| |||||||||  ||  |||| |||||||| |  | ||||||||||||||||||||||| |||||||||||||    
T  25543390 tatttgatgaaatcaatatatgtcccaccactttgtgtaggta-tattcccaatgtgcagcctcacaatgatttaaaccaataagatagtgagtattaga 25543488  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  25543489 gagagtgtt 25543497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 15523260 - 15523364
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||| || | |||||||||| || ||||| | || ||||||||||||||||||    ||| |||||||||    
T  15523260 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaata----agttagtattaga 15523355  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  15523356 gagagtgtt 15523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 15531254 - 15531358
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||| || | |||||||||| || ||||| | || ||||||||||||||||||    ||| |||||||||    
T  15531254 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaata----agttagtattaga 15531349  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  15531350 gagagtgtt 15531358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 15928605 - 15928707
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||| |||| ||||||||| ||| | |||||||| ||||||||| ||| ||||| ||  ||| |||||||||||||||| |||||||||||||||    
T  15928605 tatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtgagtattaga 15928704  T
Q  120 gag 122  Q
    |||    
T  15928705 gag 15928707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 29673525 - 29673651
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||| |||||||||| | |||||||   ||| |||| ||| ||||| | | ||||| |||||||||||||| | |||||||||||||    
T  29673525 tattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataaaaaagtgagtattaga 29673624  T
Q  120 gagagtgttgctaacactcctcttttt 146  Q
    ||||||||||||| || | ||||||||    
T  29673625 gagagtgttgctagcattactcttttt 29673651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31866368 - 31866480
Alignment:
Q  22 ttggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    ||||||||||| |||||||||||||||| ||| ||   |||| ||||  || |||| || |||||||||||||||| ||||||| ||||||||||| |||    
T  31866368 ttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgt-aatccacaatgatttaaactaataagaaagtgagtattaaaga 31866466  T
Q  122 gagtgttgctaaca 135  Q
    |||| |||||||||    
T  31866467 gagtattgctaaca 31866480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 49730914 - 49730995
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaat 101  Q
    |||| ||| ||| |||| |||||| |||||||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||    
T  49730914 tattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 27570275 - 27570383
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||| |||||||||  |||||||||| | |||||||| |||  ||||  || |||||||||||||||||||| ||| ||||||| ||||| | | |||    
T  27570275 tattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgatttgaactaataagaaagtgaatttgaga 27570374  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  27570375 gagagtgtt 27570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 28218178 - 28218078
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||| ||| ||||||||||  ||| |||| ||| ||||| | ||||| | |||||||  ||||||| |||||||||||||    
T  28218178 tattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaattaataagatagtgagtattaga 28218079  T
Q  120 g 120  Q
    |    
T  28218078 g 28218078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 35336973 - 35337025
Alignment:
Q  83 cacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaaca 135  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  35336973 cacaatgatttaaaccaataagagaacgagtattagagagagtgttgataaca 35337025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 45179376 - 45179261
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| || |||| ||||||||| |||  |||||||| | |||| |||| ||| ||||||||||||||| | |||||  ||||||| | |||||||||||    
T  45179376 tattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtattaga 45179277  T
Q  120 gagagtgttgctaaca 135  Q
    ||||||| || |||||    
T  45179276 gagagtgctgttaaca 45179261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 1093203 - 1093118
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||| |||||||| ||||||||| |||| ||||||| || ||| ||||||||| |||||   |||||||||||||||| |||||||    
T  1093203 tattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaactaataaga 1093118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 3872755 - 3872671
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagt 113  Q
    |||| ||| |||||| ||| |||||||||  |||| |||||||| ||||| ||||||||||||| |||||||||| |||| ||||    
T  3872755 aaatcaatatatgtcacaccactttgtgtaggttcaatttccaaagtgtagacccacaatgattcaaaccaataaaagagagagt 3872671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 6325933 - 6325858
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||| |||||||||||||| | |||||||| ||||| |||| || |||||||||||||||||| |||||||| ||||    
T  6325933 aaatcaatgtatgtcccaccattttgtgtgagttctttttcaaa-gtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 39974266 - 39974222
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  39974266 acaatgatttaaaccaataagagagtgagtattagaaagaatgtt 39974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 16948597 - 16948558
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  16948597 ccacaatgatttaaatcaataagagagtgagtattagaga 16948558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 931438 - 931532
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||  | ||| |||| |||| |||| |||  | || |||||||||||||||||||||||| ||||||| ||||||| | ||||||    
T  931438 aatgtatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgtt 931532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 11135789 - 11135895
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||   || ||| |||||| | ||||||| |||||||||  |||    
T  11135789 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctag 11135888  T
Q  119 agagagt 125  Q
    |||||||    
T  11135889 agagagt 11135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 12767418 - 12767356
Alignment:
Q  60 gttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagag 122  Q
    |||||||||  || ||||| || || |||||||||||||||||| ||||||||||||||||||    
T  12767418 gttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagag 12767356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 15468284 - 15468378
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||| || ||||||||||| |||| |||| ||  ||||| ||||||||| |||||||  ||||| ||||| |||||| |||| ||||||    
T  15468284 aatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaagagtaagtatttgagatagtgtt 15468378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 44271968 - 44272077
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| ||||||||| |||| | ||| |||  |||| |||| ||| ||||| | | ||||||||||||| |||||| | | |||||||||||    
T  44271968 tattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaacaatgatttaaatcaataaaaaaatgagtattaga 44272067  T
Q  120 gagagtgttg 129  Q
     |||||||||    
T  44272068 aagagtgttg 44272077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 13114800 - 13114692
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta-aacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||| ||| |||| ||| |||||||||| ||||| | ||  ||| ||||||||  |||| |||||||| |||||||| ||||| ||| ||||||| ||||    
T  13114800 tattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgatttaacccaatgagatagtgagtgttag 13114701  T
Q  119 agagagtgt 127  Q
    |||||||||    
T  13114700 agagagtgt 13114692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 15660943 - 15661049
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||| ||||||||| ||||| || | ||| |||||||||  ||||   | ||| |||||||| ||||||| ||||||||| |||||    
T  15660943 tattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatgac-acattgatttaacccaataatagagtgagtgttaga 15661041  T
Q  120 gagagtgt 127  Q
    ||||||||    
T  15661042 gagagtgt 15661049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 44739175 - 44739226
Alignment:
Q  27 tgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||||||| |||||    
T  44739175 tgaaattaatgtatgtcccaccactttatgtgagttgtatttccaaagtgta 44739226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 11430491 - 11430549
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||    
T  11430491 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgta 11430549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 14094131 - 14094073
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||| |||||| |||||||||||||| ||||| |||| |||| |||||||| |||||    
T  14094131 tattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgta 14094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 29418531 - 29418589
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 78  Q
    |||||||| |||||||||||| || ||| ||||| |||| ||||||||||||| |||||    
T  29418531 tattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgta 29418589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 29673688 - 29673750
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctcttttt 146  Q
    ||||| |||||||||||||| | ||||| |||||||||||||||| ||| || | ||||||||    
T  29673688 acaattatttaaaccaataaaaaagtgaatattagagagagtgttactagcattactcttttt 29673750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 18157088 - 18157121
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactacttt 53  Q
    |||||||||||||||||||||||||||| |||||    
T  18157088 tattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 26980378 - 26980419
Alignment:
Q  88 tgatttaaaccaataagagagtgagtattagagagagtgttg 129  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  26980378 tgatttcatccaataatagagtgagtattagagagagtgttg 26980419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 28274841 - 28274809
Alignment:
Q  97 ccaataagagagtgagtattagagagagtgttg 129  Q
    ||||||||||||||||| |||||||||||||||    
T  28274841 ccaataagagagtgagtgttagagagagtgttg 28274809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 33060022 - 33059915
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||||||||||| | |||||| || ||| | |||| |||  ||||  || ||||| || ||||||| |||||||||||||||||||| ||| ||||    
T  33060022 tattggatgaaattaaagcatgtcc-accactctctgtgggtttaatttttaaagtgtacactcacaatgttttaaaccaataagagagtgggtactaga 33059924  T
Q  120 gagagtgtt 128  Q
     | ||||||    
T  33059923 aaaagtgtt 33059915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 33114037 - 33114129
Alignment:
Q  36 tgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||| | ||| |||  |||| |||| ||| ||||| | ||| |||||||||||||||||| | |||||||  || ||||||||||    
T  33114037 tgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtt 33114129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 45426885 - 45426837
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctattt 68  Q
    ||||| ||||||||||||||||| |||| | ||| ||||||||||||||    
T  45426885 tattgaatgaaattaatgtatgttccaccattttatgtgtgttctattt 45426837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 46335147 - 46335223
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaa 96  Q
    ||||||||||||| ||| ||| ||| || |||||||  | ||| ||||| |||||| || |||||||||||||||||    
T  46335147 tattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 1977307 - 1977195
Alignment:
Q  16 cttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    ||||| ||||||||||| ||||||||||| || |||||||||| |||| |||| ||| ||||| | |||||||||||||||||||||| |||||||||||    
T  1977307 cttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtat 1977208  T
Q  116 tagagagagtgtt 128  Q
    ||||||| |||||    
T  1977207 tagagagtgtgtt 1977195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 5979926 - 5980037
Alignment:
Q  16 cttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    |||||||||||||| || |||||||||||||| |||||||||| |||| |||| ||| |||| ||| ||||||| ||| |||||||||||||||||||||    
T  5979926 cttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggttt-aaccaataagagagtgagtat 5980024  T
Q  116 tagagagagtgtt 128  Q
    |||||||||||||    
T  5980025 tagagagagtgtt 5980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 9952887 - 9952779
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||| ||||||||| |||||||||| |||| |||| ||| |||||||||||||||||||||||||||||||| | ||||||||  |    
T  9952887 tattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataagataatgagtatttaa 9952788  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  9952787 gagagtgtt 9952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 43506585 - 43506706
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||  ||| ||||||||| |||| |||||||||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||  |    
T  43506585 tattggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagccaataagagagtgagtatt--a 43506682  T
Q  120 gagagtgttgctaacactcctctt 143  Q
    ||||||||||||| |||| |||||    
T  43506683 gagagtgttgctagcactactctt 43506706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 24056050 - 24055947
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagag 124  Q
    ||||||||||||||||||||||| |||||||||  |||| |||| ||| ||||| ||||||||| |||||||||||||||||||||||| ||||||| ||    
T  24056050 gatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtagacccacaattatttaaaccaataagagagtgagtgttagagaaag 24055951  T
Q  125 tgtt 128  Q
    ||||    
T  24055950 tgtt 24055947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 17499363 - 17499258
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||| |||||||||| | |||||||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  17499363 tattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtattaga 17499264  T
Q  120 gagagt 125  Q
    ||||||    
T  17499263 gagagt 17499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 32072147 - 32072259
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| ||||  || ||||| ||||||||| ||||||| |||||||||| || | ||||||    
T  32072147 tattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattatttaaatcaataagagaatgggcattaga 32072246  T
Q  120 gagagtgttgcta 132  Q
    |||||||||||||    
T  32072247 gagagtgttgcta 32072259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 8914822 - 8914942
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    ||||||| |||  |||||||||||||| |||||||||| ||||  ||| ||| ||||| ||||||||||||||||||||||||||||||| ||   ||||    
T  8914822 attggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagag 8914921  T
Q  121 agagtgttgctaacactcctc 141  Q
    |||||||||||| || |||||    
T  8914922 agagtgttgctagcattcctc 8914942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 16983444 - 16983552
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| | | |||||||||  |||||||| | |||| |||| ||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  16983444 tattggataaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattaga 16983543  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  16983544 gagagtgtt 16983552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 41727489 - 41727597
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||| ||||||||||||||  ||||||||  ||||| |||  |||||||| || || ||||||||||||||| |||||||||||||||||||||||||||    
T  41727489 aaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T
Q  129 gctaacact 137  Q
    |||| ||||    
T  41727589 gctagcact 41727597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 8903902 - 8904001
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| |||||||| |||||||||||||| |||||||||  |||| |||| ||| ||||| |||||||||||||||||||||||||||||| |||| ||||    
T  8903902 tatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtaataga 8904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 14236388 - 14236503
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||| ||||||||  |||||||||| |||||||||  |||| ||||  || |||||  | |||||| ||||||||||| ||||||||||||||||||    
T  14236388 tattggaagaaattaaaatatgtcccaccactttgtgtaagttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattaga 14236487  T
Q  120 gagagtgttgctaaca 135  Q
    ||||||||||||||||    
T  14236488 gagagtgttgctaaca 14236503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 28413999 - 28413901
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||| |||||||| |||||||||||||| |||||||||| |||| |||| ||| || || ||||| |||||||||||||||||| ||| ||||||||||    
T  28413999 tattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtatagacccataatgatttaaaccaataaaagaatgagtattag 28413901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 7493432 - 7493364
Alignment:
Q  60 gttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7493432 gttctattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagaaagagtgtt 7493364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 34861317 - 34861214
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| |||||||||  |||| |||| ||| ||     |||||||| |||||||||||||||||||||||||||||     
T  34861317 tattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----cccacaataatttaaaccaataagagagtgagtattagg 34861223  T
Q  120 gagagtgtt 128  Q
    ||| |||||    
T  34861222 gagggtgtt 34861214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 23685181 - 23685285
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||||| ||||| |  | ||||||||||||||||||    ||| |||||||||    
T  23685181 tattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgatttaaaccaata----agttagtattaga 23685276  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  23685277 gagagtgtt 23685285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 6098901 - 6098799
Alignment:
Q  24 ggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    |||||||||||  |||| |||||| ||||||||  ||||| |||| ||| ||||| | ||||||| ||||||| ||||||||||||||||||||||||||    
T  6098901 ggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagaga 6098804  T
Q  124 gtgtt 128  Q
     ||||    
T  6098803 atgtt 6098799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 31301165 - 31301265
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| ||||||||| |||| |||||||||| ||||||||| ||||||||| |  || ||| |||||||||||||||||| ||| |||| ||    
T  31301165 tattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataagagaatgaatatttga 31301263  T
Q  120 ga 121  Q
    ||    
T  31301264 ga 31301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 36804969 - 36804860
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| ||| |||||||||||||| | |||||||| |||| |||| |||  | || | ||||||| ||||||| |||||||||||| |||||||||    
T  36804969 tattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattaga 36804870  T
Q  120 gagagtgttg 129  Q
    |||| |||||    
T  36804869 gagaatgttg 36804860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 35797445 - 35797552
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||||||||| |||| |||||||| | |||| ||||  || ||||||| ||||||||||||||| |||||  ||||||||||||  |    
T  35797445 tattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaata--agagtgagtattgta 35797542  T
Q  120 gagagtgttg 129  Q
    ||||||||||    
T  35797543 gagagtgttg 35797552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 13407454 - 13407345
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| |||||||||||||| | |||  ||| ||||||||| ||| |||||  ||||||| |||||||| ||||| ||||| ||||| ||||    
T  13407454 tattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttag 13407355  T
Q  119 agagagtgtt 128  Q
    ||||||||||    
T  13407354 agagagtgtt 13407345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 17741657 - 17741552
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||| | |||| |||| ||| ||||| ||| | |||| |||||||||||||   | |||||||||||    
T  17741657 tattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtattaga 17741558  T
Q  120 gagagt 125  Q
    ||||||    
T  17741557 gagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 36629740 - 36629817
Alignment:
Q  53 tgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaat-aagagagtgagtattagagagagtgttg 129  Q
    |||||| ||||||||||||||||||| |||| ||||||| ||||||||| || | | |||||||||||||||||||||    
T  36629740 tgtgtgggttctatttccaatgtgtagacccgcaatgatctaaaccaataaaaaaaatgagtattagagagagtgttg 36629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 6387611 - 6387719
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| |||||||||||||| | ||| |||| |||| |||||||| || ||  ||||||| || ||||| ||||||||||| ||||| ||||    
T  6387611 tattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaacccaataagagaatgagtgttag 6387710  T
Q  119 agagagtgt 127  Q
    |||||||||    
T  6387711 agagagtgt 6387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 13214545 - 13214653
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||| |||||||||||||||||  | |||||||   ||| |||| ||| ||||| |||||||||  | ||||| |||||||||| |||||||||     
T  13214545 tattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtattagg 13214644  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  13214645 gagagtgtt 13214653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 5095826 - 5095788
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagagag 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagag 5095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 9453573 - 9453639
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctcttttt 146  Q
    |||||||  ||||||| ||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  9453573 acccacatagatttaacccaattagagagtgagtattaaagagagtgttgctagcactactcttttt 9453639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 45246484 - 45246589
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||||||||| ||| ||||| || | ||||||||||||| ||||| | |  |||||||||||| ||||||||||| | ||||  ||    
T  45246484 tattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagggggtatagga 45246583  T
Q  120 gagagt 125  Q
    ||||||    
T  45246584 gagagt 45246589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 35151859 - 35151751
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||||||| | |||||| |  ||| ||||  || ||||| ||||||||| ||| |||| ||||||| ||||| ||||| |    
T  35151859 tattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaa 35151760  T
Q  120 gagagtgtt 128  Q
     ||||||||    
T  35151759 tagagtgtt 35151751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 9193432 - 9193515
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||| |||||||||| |||||||| |||||||||||||  |||| |||| ||| ||||| ||| ||||| ||| ||||||||||    
T  9193432 tatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataa 9193515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 35689530 - 35689637
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaa-acccacaatgatttaaaccaataagagagtgagtattag 118  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||| |||| ||| ||||||  |||||| || ||| | ||||||| | |||||||  |||    
T  35689530 tattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccacattgttttcacccaataaaaaagtgagtgctag 35689629  T
Q  119 agagagtg 126  Q
    ||||||||    
T  35689630 agagagtg 35689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 45525006 - 45524893
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt-aaacccacaatgatttaaaccaataagagagtgagtattag 118  Q
    |||||||| |||| |||||||| ||||| |||||| |||    | |||||||| |||| |||||||| ||||||||| ||||| | | ||||||| || |    
T  45525006 tattggataaaatcaatgtatgacccaccactttgagtggaacccatttccaaagtgtgaaacccaccatgatttaagccaattaaaaagtgagtgttgg 45524907  T
Q  119 agagagtgttgcta 132  Q
    ||||||||||||||    
T  45524906 agagagtgttgcta 45524893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 17716901 - 17716977
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaa 96  Q
    ||||||||||||| ||| |||||||||||| ||| |||| |||  |||| ||| ||||| ||||||||||| |||||    
T  17716901 tattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 17915926 - 17915970
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||    
T  17915926 acaatgatttaaactaataataaagtgagtattagagagagtgtt 17915970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 28700615 - 28700577
Alignment:
Q  90 atttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  28700615 atttaacccaataagagagtgagtgttagagagagtgtt 28700577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 34952507 - 34952601
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||| | |||||| |  ||| |||| |||| |||| |||| |||||||||||||||| |  | | | ||||||||||||||||||    
T  34952507 aatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgtt 34952601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 28485511 - 28485478
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactacttt 53  Q
    |||||||||||||||||||||||||||| |||||    
T  28485511 tattggatgaaattaatgtatgtcccaccacttt 28485478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 3099675 - 3099635
Alignment:
Q  81 cccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  3099675 cccacaatgatttaaaccaataaaagagtgaaaattagaga 3099635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 5727346 - 5727390
Alignment:
Q  84 acaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||||||||||||||| | |||||||| ||||||| |||||    
T  5727346 acaatgatttaaaccaataaaaaagtgagtactagagagggtgtt 5727390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 39455657 - 39455717
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctct 142  Q
    ||||| |||||| | | |||||||||||| || |||||||||||||| ||| |||||||||    
T  39455657 ccacattgattttacctaataagagagtgggtgttagagagagtgttcctagcactcctct 39455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 43121607 - 43121539
Alignment:
Q  71 aatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcc 139  Q
    |||||||| | ||| | |||||||||||||||| | | ||| ||||||| |||||||||||||| ||||    
T  43121607 aatgtgtagatccatattgatttaaaccaataaaaaaatgaatattagaaagagtgttgctaaccctcc 43121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 28490852 - 28490744
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || ||||||||||| |||||||||  |||| ||||  || ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  28490852 tattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaaccaataagagagtgagtattaga 28490753  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  28490752 gagagtgtt 28490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 41105700 - 41105594
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| || | |||||||||||||||||||| |||| |||| ||| ||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  41105700 tattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgagtattaga 41105601  T
Q  120 gagagtg 126  Q
    |||||||    
T  41105600 gagagtg 41105594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 43405443 - 43405552
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||| |||||||||| ||| ||||||| | |||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||| |||    
T  43405443 tattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagagagtgaatatcaga 43405542  T
Q  120 gagagtgttg 129  Q
    | ||||||||    
T  43405543 gggagtgttg 43405552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 10142106 - 10141994
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| |||||||||||||| |||||||||  |||| |||| ||| ||||| ||| ||||| ||||||| |||||||||||||||| |||||    
T  10142106 tattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagagagtgagtgttaga 10142007  T
Q  120 gagagtgttgcta 132  Q
    |||||||||||||    
T  10142006 gagagtgttgcta 10141994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 30326004 - 30325896
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||||||||||| |||||||||| ||| ||||| || | ||||||| ||||| ||||| | || ||||||||||||||||||||| |||||||||||||    
T  30326004 tattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattaga 30325905  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  30325904 gagagtgtt 30325896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 5413867 - 5413770
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||    
T  5413867 tattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtgagtatta 5413770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 10253216 - 10253089
Alignment:
Q  16 cttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtat 115  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||     ||| ||||||| ||||||||||||||||| ||||||| |    
T  10253216 cttctattggatgaaattaatgtatgtcccaccactttatgtgagttctatttcca-----taatcccacaacgatttaaaccaataagaaagtgagtgt 10253122  T
Q  116 t--agagagagtgttgctaacactcctcttttt 146  Q
    |  | | |||||||| ||| |||||||||||||    
T  10253121 tcaaaaaagagtgttactagcactcctcttttt 10253089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 25710595 - 25710480
Alignment:
Q  27 tgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtg 126  Q
    |||||| ||||||||||| || |||| || || ||||||||| ||| ||||| ||||||||| |||||||||||||||||| ||| ||||| ||||||||    
T  25710595 tgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaaccaataagagaatgaatattaaagagagtg 25710496  T
Q  127 ttgctaacactcctct 142  Q
    |||||| |||| ||||    
T  25710495 ttgctatcacttctct 25710480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 36338020 - 36337937
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||| ||||||||||||||||||||||  | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||    
T  36338020 tatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatttaaaccaataa 36337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 34384821 - 34384713
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||| |||||| |||||||||||||||| |||||||| |||| |||| |||  | || || |||||||||||| ||| |||| ||||||||||||| |    
T  34384821 tattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaagagtgagtattaaa 34384722  T
Q  120 gagagtgtt 128  Q
    |||||||||    
T  34384721 gagagtgtt 34384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 39246658 - 39246750
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgag 112  Q
    |||||||| |||| |||||||||||||| |||||||||| ||||  ||| ||| ||||| |||||||||  ||||||||||||||||||||||    
T  39246658 tattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 27592582 - 27592492
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtg 110  Q
    ||||||||||||| |||||||||| ||| ||||| || | ||||||||||||| ||||| | |  ||||||||||||||||||||||||||    
T  27592582 tattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaaccaataagagagtg 27592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 34368411 - 34368500
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtg 110  Q
    ||||||| |||  ||||||||| |||| |||||||||| ||||  ||| ||| ||||| |||||||||||||||||||||||||||||||    
T  34368411 attggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 34368500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 41330523 - 41330438
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataaga 105  Q
    |||| ||||||||||||||||||||||  |||||||||  |||| |||| ||| ||||| || |||||||||||||||||||||||    
T  41330523 tattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataaga 41330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 17434986 - 17434876
Alignment:
Q  13 tcacttctattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgag 112  Q
    |||||| |||||||| |||  ||| ||||| | |||| ||||| || |||||||||| || ||||| ||||||| |||||||||||||||| |||||||     
T  17434986 tcacttttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgtagacccacattgatttaaaccaataaaagagtgaa 17434887  T
Q  113 tattagagaga 123  Q
     ||||||||||    
T  17434886 cattagagaga 17434876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 25564076 - 25564006
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgat 91  Q
    ||||||||||||| ||||||||| |||| |||||||||| ||||||| || ||||||| |||||||||||||    
T  25564076 tattggatgaaataaatgtatgttccaccactttgtgtgggttctatatctaatgtgt-aacccacaatgat 25564006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 28090353 - 28090250
Alignment:
Q  26 atgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagt 125  Q
    ||||||| |||  ||||||||| |||||||||| |||| |||| ||| || || | | |||||||||||||||||||| ||||||| ||||| | |||||    
T  28090353 atgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaagagtgaatattacatagagt 28090254  T
Q  126 gttg 129  Q
    ||||    
T  28090253 gttg 28090250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 28434946 - 28434846
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||||||| |||| ||| |||||||||| |||  ||||  |||| |||| ||| || || |||||||||||||||||||||||||| | |||||||||||    
T  28434946 tattggataaaatcaatatatgtcccaccact--gtgttggttcaattttcaaagtttagacccacaatgatttaaaccaataagaaaatgagtattaga 28434849  T
Q  120 gag 122  Q
    |||    
T  28434848 gag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 28223906 - 28223804
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    ||||| ||||||||| ||||||| |  | | |||||||| | || |||| ||| || || ||||| |||||||||||||||||| |||||||||||||||    
T  28223906 tattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttcaaagtatagacccataatgatttaaaccaataaaagagtgagtattaga 28223807  T
Q  120 gag 122  Q
    |||    
T  28223806 gag 28223804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 37455399 - 37455500
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| ||| |||| ||||||||| |||| | |||||| | |||| |||| ||| ||||| || |||||| ||| ||||||||||||||||||||||||||    
T  37455399 tattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaataatt-aaaccaataagagagtgagtattaga 37455497  T
Q  120 gag 122  Q
    |||    
T  37455498 gag 37455500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 10950137 - 10950238
Alignment:
Q  21 attggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagag 120  Q
    |||| ||||||| |||||||||||||| | ||||| ||  |||||||| ||| || || || || |||||||||||| ||||||||| ||| ||||||||    
T  10950137 attgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatttaaactaataagagaatgaatattagag 10950236  T
Q  121 ag 122  Q
    ||    
T  10950237 ag 10950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 17537232 - 17537123
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 119  Q
    |||| ||| |||| |||||||||||||| | ||| |||  |||  |||| ||| ||||| | ||| |||||||||||||||||||||||||| ||| |||    
T  17537232 tatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatttaaaccaataagagagtgaatataaga 17537133  T
Q  120 gagagtgttg 129  Q
    |||| |||||    
T  17537132 gagattgttg 17537123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 25630866 - 25630948
Alignment:
Q  29 aaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtga 111  Q
    |||||||||||| |||||||| ||||| |  |||| |||| ||| ||||| |||||| ||||||||||||||| ||| |||||    
T  25630866 aaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacgatgatttaaaccaattagaaagtga 25630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 2525624 - 2525721
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||||||||| ||||||| |  ||| ||||||||||  |||| ||| ||| |||||||  || |||||||||||  ||||||||||||| |||||    
T  2525624 tattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgtaaatacataatgatttaaattaataagagagtgaatatta 2525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 14553616 - 14553665
Alignment:
Q  74 gtgtaaacccacaatgatttaaaccaataagagagtgagtattagagaga 123  Q
    ||||| ||||||||| | ||||||||| ||||||||||||||||||||||    
T  14553616 gtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 5465722 - 5465674
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||| |||||||||||||||||||||||||| ||||||| | ||||||    
T  5465722 acccataatgatttaaaccaataagagagtgaatattagaaaaagtgtt 5465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 1923668 - 1923581
Alignment:
Q  34 aatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagaga 121  Q
    |||||||||| ||| |||||||||| |||| ||||  || |||||     |||||||||||||||||||||| | |||||||||||||    
T  1923668 aatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagttttacaatgatttaaaccaataagataatgagtattagaga 1923581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 38607212 - 38607169
Alignment:
Q  89 gatttaaaccaataagagagtgagtattagagagagtgttgcta 132  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  38607212 gatttaaacaaataagagagtaagtattaaagagagtgttgcta 38607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 25919266 - 25919344
Alignment:
Q  25 gatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataa 103  Q
    |||||||| ||| |||||| ||| | |||||||| | || |||| ||| ||||| || |||||||||||||||||||||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataa 25919344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 28611892 - 28611802
Alignment:
Q  36 tgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattagagagagtg 126  Q
    |||||||||||  ||||||| || |||| ||||  || ||||| || |||||||||||||| |||||| |||||  || ||||||||||||    
T  28611892 tgtatgtcccatcactttgtatgagttccatttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtg 28611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 13381910 - 13381813
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtatta 117  Q
    ||||||| | ||| ||||||| |||||  |||||| ||| |||||||||||||   ||||||| | ||||||||||| |||||| | ||||| |||||    
T  13381910 tattggacggaatcaatgtatttcccaagactttgagtgggttctatttccaaaacgtaaacctataatgatttaaatcaataaaaaagtgaatatta 13381813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 16875372 - 16875421
Alignment:
Q  79 aacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    |||||||| |||||| | ||||||||||||||||| ||||||| ||||||    
T  16875372 aacccacattgattttacccaataagagagtgagtgttagagaaagtgtt 16875421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 25002075 - 25002026
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgttg 129  Q
    |||||| ||||||||||||||| ||| ||||||| || ||||||||||||    
T  25002075 acccactatgatttaaaccaattagaaagtgagtgttggagagagtgttg 25002026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 4714799 - 4714887
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagag 108  Q
    |||||||| |||||| ||| |||||||  | |||||||| ||||||||| |||  |||| |  |||||||||||| |||||||| ||||    
T  4714799 tattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttataccaataaaagag 4714887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 12076132 - 12076084
Alignment:
Q  80 acccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 128  Q
    ||||||| |||||||| ||||| ||||||||||||||||| | ||||||    
T  12076132 acccacattgatttaagccaattagagagtgagtattagataaagtgtt 12076084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 9714 - 9801
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagaga 107  Q
    ||||||||||||| ||||||| |||||| | |||||||| |||| ||||  || ||||| || |||||| |||||||| |||||||||    
T  9714 tattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 11260 - 11347
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagaga 107  Q
    ||||||||||||| ||||||| |||||| | |||||||| |||| ||||  || ||||| || |||||| |||||||| |||||||||    
T  11260 tattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 26992 - 26902
Alignment:
Q  20 tattggatgaaattaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtg 110  Q
    |||||||  |||| ||||||||| |||| |||||||||| |||| |||| ||| | ||| ||||| |||| ||||||||||||| ||||||    
T  26992 tattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 26902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 14083 - 14023
Alignment:
Q  82 ccacaatgatttaaaccaataagagagtgagtattagagagagtgttgctaacactcctct 142  Q
    ||||| |||||| | | |||||||||||| || |||||||||||||| ||| |||||||||    
T  14083 ccacattgattttacctaataagagagtgggtgttagagagagtgttcctagcactcctct 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 121255 - 121227
Alignment:
Q  95 aaccaataagagagtgagtattagagaga 123  Q
    |||||||||||||||||||||||||||||    
T  121255 aaccaataagagagtgagtattagagaga 121227  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 296891 - 296859
Alignment:
Q  97 ccaataagagagtgagtattagagagagtgttg 129  Q
    ||||||||||||||||| |||||||||||||||    
T  296891 ccaataagagagtgagtgttagagagagtgttg 296859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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