View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9126_low_6 (Length: 505)
Name: NF9126_low_6
Description: NF9126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9126_low_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 463; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 16 - 505
Target Start/End: Complemental strand, 48912860 - 48912373
Alignment:
| Q |
16 |
attttttgtatattgaattgttttgtaggttcgacttgcaaagaaggtcctgcagaaggtggtaattagatatcttcgccgggataaccttcttgtatcc |
115 |
Q |
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| T |
48912860 |
attttttgtatattgaattgttttgtaggttcgacttgcaaagaaggtcctgcagaaggtggtaattagatatcttcgtcgggataaccttcttgtatcc |
48912761 |
T |
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| Q |
116 |
agtatcaagcgacttgtggagctggcaaagatcgggagggaagctttaatgaactgcgacatcgatgaactaggtgaaataatgttggaggcttggagat |
215 |
Q |
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| T |
48912760 |
agtatcaagcgacttgtggagcttgcaaagatcgggagggaagctttaatgaactgcgacatcgatgaactaggcgaaataatgttggaggcttggagat |
48912661 |
T |
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| Q |
216 |
tgcatcaggaacttgatccttactgcagcaatgatttcgtcgacaagttattttcttttgccagtccatactgttgtggttacaagctggttggagctgg |
315 |
Q |
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| T |
48912660 |
tgcatcaggaacttgatccttactgcagcaatgatttcgtcgacaagttattttcttttgccagtccatactgttgtggttacaagctggttggagctgg |
48912561 |
T |
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| Q |
316 |
tggtgggggctttgctctcttaattgccaaagacacacaacgtgccaaggaactcagacagaggctagaagatgagaaagattttgaagtgaaaatctat |
415 |
Q |
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| T |
48912560 |
tggtgggggctttgctctcttaattgccaaagacacacaacgtgccaaggaactcagacagaggctagaagatgagaaagattttggagtgaaaatctat |
48912461 |
T |
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| Q |
416 |
gattggcagatatctttatagtatgatatgaacagaataccaacttgttggaaaatagttgtattggtgacagagtttattttatcattc |
505 |
Q |
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| T |
48912460 |
gattggcagatatctttatagtatgatatgaacagaataccaacttgttggaaaatagttgtattggtgac--agtttattttatcattc |
48912373 |
T |
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