View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9127_high_4 (Length: 249)

Name: NF9127_high_4
Description: NF9127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9127_high_4
NF9127_high_4
[»] chr5 (34 HSPs)
chr5 (1-248)||(40187668-40187914)
chr5 (31-224)||(7350448-7350642)
chr5 (7-239)||(29664810-29665043)
chr5 (1-224)||(18451896-18452120)
chr5 (7-239)||(17153008-17153241)
chr5 (1-223)||(27900412-27900633)
chr5 (1-248)||(38972753-38973000)
chr5 (82-238)||(35583957-35584112)
chr5 (99-224)||(457482-457603)
chr5 (7-185)||(16311310-16311488)
chr5 (80-239)||(24207529-24207685)
chr5 (1-103)||(4920801-4920904)
chr5 (58-224)||(12457371-12457537)
chr5 (1-103)||(15890182-15890284)
chr5 (1-93)||(12773832-12773925)
chr5 (77-204)||(16366535-16366664)
chr5 (15-103)||(35194014-35194103)
chr5 (1-59)||(23045002-23045060)
chr5 (1-122)||(32574949-32575071)
chr5 (1-248)||(6809995-6810236)
chr5 (1-93)||(12712568-12712661)
chr5 (1-100)||(18206997-18207096)
chr5 (1-103)||(38006480-38006583)
chr5 (1-103)||(42987490-42987593)
chr5 (33-102)||(15564612-15564682)
chr5 (7-103)||(35311797-35311894)
chr5 (1-103)||(4583094-4583197)
chr5 (1-103)||(5908699-5908802)
chr5 (1-103)||(17853304-17853406)
chr5 (1-59)||(28569032-28569090)
chr5 (31-103)||(6092559-6092632)
chr5 (30-103)||(28045631-28045704)
chr5 (31-74)||(18116547-18116591)
chr5 (31-74)||(43523763-43523807)
[»] chr4 (53 HSPs)
chr4 (1-217)||(8843816-8844032)
chr4 (1-217)||(8856780-8856996)
chr4 (83-235)||(33616209-33616361)
chr4 (1-248)||(36306622-36306869)
chr4 (1-237)||(42907734-42907970)
chr4 (82-248)||(17113096-17113260)
chr4 (82-237)||(25265240-25265394)
chr4 (57-230)||(9280957-9281130)
chr4 (57-233)||(30034525-30034700)
chr4 (10-237)||(12075651-12075879)
chr4 (8-224)||(21713993-21714210)
chr4 (57-248)||(9929235-9929426)
chr4 (9-224)||(25298852-25299067)
chr4 (7-224)||(21956831-21957048)
chr4 (15-229)||(33516097-33516313)
chr4 (135-237)||(37926408-37926508)
chr4 (1-248)||(25940977-25941222)
chr4 (1-123)||(10302044-10302168)
chr4 (136-239)||(7334330-7334433)
chr4 (1-74)||(15733537-15733611)
chr4 (1-200)||(39086040-39086241)
chr4 (8-230)||(23927659-23927879)
chr4 (88-239)||(36918969-36919119)
chr4 (136-237)||(35304663-35304764)
chr4 (80-239)||(40420676-40420825)
chr4 (1-103)||(1724321-1724424)
chr4 (1-103)||(12825472-12825575)
chr4 (1-59)||(29527838-29527896)
chr4 (1-229)||(3505121-3505352)
chr4 (171-239)||(4652605-4652673)
chr4 (140-224)||(24474965-24475049)
chr4 (78-188)||(55783402-55783510)
chr4 (78-188)||(55847584-55847692)
chr4 (1-59)||(1866560-1866618)
chr4 (1-59)||(14605936-14605994)
chr4 (2-103)||(43893209-43893311)
chr4 (101-239)||(53906791-53906924)
chr4 (1-93)||(10574430-10574523)
chr4 (1-103)||(11028053-11028157)
chr4 (1-103)||(5902625-5902728)
chr4 (170-205)||(8844041-8844076)
chr4 (170-205)||(8857005-8857040)
chr4 (1-103)||(11122880-11122983)
chr4 (1-95)||(19883067-19883162)
chr4 (1-103)||(31752437-31752540)
chr4 (1-103)||(32585470-32585573)
chr4 (1-103)||(32596195-32596298)
chr4 (1-103)||(47550364-47550467)
chr4 (2-103)||(26564812-26564914)
chr4 (1-59)||(31782639-31782697)
chr4 (1-93)||(45065240-45065333)
chr4 (7-59)||(30266347-30266399)
chr4 (7-59)||(30285789-30285841)
[»] chr6 (31 HSPs)
chr6 (1-248)||(9402420-9402666)
chr6 (1-224)||(20348919-20349142)
chr6 (65-224)||(1947866-1948025)
chr6 (1-237)||(34346015-34346261)
chr6 (83-230)||(14321717-14321862)
chr6 (71-239)||(2126702-2126870)
chr6 (1-204)||(13768946-13769150)
chr6 (151-239)||(24221455-24221543)
chr6 (1-103)||(27738747-27738850)
chr6 (28-198)||(29341131-29341307)
chr6 (2-248)||(10925454-10925700)
chr6 (136-229)||(8320941-8321034)
chr6 (1-157)||(32959782-32959938)
chr6 (1-103)||(32532515-32532618)
chr6 (1-103)||(32853819-32853922)
chr6 (41-104)||(16405460-16405524)
chr6 (1-76)||(28079706-28079782)
chr6 (1-103)||(2367301-2367404)
chr6 (1-103)||(11762420-11762523)
chr6 (1-59)||(29199895-29199953)
chr6 (2-86)||(9458655-9458740)
chr6 (2-59)||(20610993-20611050)
chr6 (1-120)||(256502-256622)
chr6 (193-237)||(29340761-29340805)
chr6 (1-103)||(5863393-5863496)
chr6 (43-102)||(6366444-6366503)
chr6 (1-103)||(12678104-12678207)
chr6 (1-74)||(7393897-7393971)
chr6 (3-103)||(12309547-12309648)
chr6 (1-81)||(14410865-14410946)
chr6 (193-237)||(29342114-29342158)
[»] chr8 (30 HSPs)
chr8 (1-248)||(5700187-5700434)
chr8 (1-239)||(29918446-29918685)
chr8 (1-224)||(28345345-28345569)
chr8 (2-248)||(30903875-30904123)
chr8 (1-224)||(8545359-8545583)
chr8 (136-239)||(36274882-36274985)
chr8 (3-239)||(6388528-6388754)
chr8 (5-248)||(9476027-9476261)
chr8 (1-123)||(9642361-9642485)
chr8 (1-234)||(27777208-27777443)
chr8 (6-145)||(39379595-39379733)
chr8 (1-231)||(17084117-17084350)
chr8 (1-96)||(15173890-15173986)
chr8 (79-224)||(29416263-29416412)
chr8 (1-103)||(40248381-40248484)
chr8 (1-93)||(2183616-2183709)
chr8 (1-103)||(27932388-27932491)
chr8 (1-166)||(12468229-12468394)
chr8 (1-103)||(1063482-1063585)
chr8 (1-119)||(14155491-14155610)
chr8 (1-103)||(24568913-24569016)
chr8 (1-59)||(15068598-15068655)
chr8 (8-103)||(14186295-14186391)
chr8 (1-100)||(43113636-43113736)
chr8 (1-103)||(17469230-17469333)
chr8 (1-103)||(24870034-24870137)
chr8 (1-103)||(24927924-24928027)
chr8 (1-103)||(29108832-29108935)
chr8 (1-103)||(36131927-36132030)
chr8 (110-224)||(5793439-5793553)
[»] chr7 (43 HSPs)
chr7 (1-224)||(11472724-11472946)
chr7 (27-239)||(3773913-3774126)
chr7 (10-239)||(37217848-37218079)
chr7 (1-239)||(3156927-3157166)
chr7 (1-237)||(43550427-43550662)
chr7 (136-239)||(23533751-23533854)
chr7 (72-224)||(31345385-31345537)
chr7 (1-201)||(23475273-23475475)
chr7 (1-102)||(27850336-27850438)
chr7 (7-224)||(6557741-6557960)
chr7 (1-239)||(19440020-19440260)
chr7 (1-103)||(25979927-25980030)
chr7 (142-237)||(29292536-29292633)
chr7 (1-103)||(41741460-41741562)
chr7 (1-93)||(31425998-31426091)
chr7 (1-103)||(5377065-5377168)
chr7 (1-91)||(18683966-18684057)
chr7 (1-103)||(30650611-30650714)
chr7 (1-103)||(16811710-16811812)
chr7 (1-103)||(10072446-10072549)
chr7 (1-103)||(16866149-16866252)
chr7 (1-103)||(25782917-25783020)
chr7 (1-103)||(39316975-39317078)
chr7 (1-102)||(18825882-18825984)
chr7 (4-93)||(28309482-28309572)
chr7 (1-93)||(32546182-32546275)
chr7 (1-103)||(3920518-3920621)
chr7 (1-103)||(39456025-39456126)
chr7 (1-52)||(42908051-42908102)
chr7 (1-103)||(45885775-45885878)
chr7 (197-239)||(8265672-8265714)
chr7 (1-59)||(10990871-10990929)
chr7 (1-82)||(12980378-12980460)
chr7 (1-74)||(21750791-21750865)
chr7 (44-122)||(24903378-24903456)
chr7 (1-94)||(27063127-27063221)
chr7 (1-39)||(29292749-29292787)
chr7 (1-69)||(27063348-27063417)
chr7 (1-97)||(27896485-27896582)
chr7 (1-59)||(29157374-29157434)
chr7 (1-72)||(3226956-3227028)
chr7 (1-41)||(43507488-43507528)
chr7 (8-103)||(44734374-44734470)
[»] chr3 (27 HSPs)
chr3 (99-239)||(27252407-27252546)
chr3 (10-224)||(3385875-3386090)
chr3 (65-224)||(3414608-3414767)
chr3 (9-191)||(30904834-30905016)
chr3 (149-248)||(26207118-26207216)
chr3 (69-239)||(37032177-37032345)
chr3 (57-229)||(772861-773032)
chr3 (169-239)||(27937570-27937640)
chr3 (1-103)||(43582553-43582655)
chr3 (136-239)||(34592995-34593098)
chr3 (1-103)||(44172601-44172704)
chr3 (1-103)||(44179301-44179404)
chr3 (1-103)||(44953445-44953548)
chr3 (1-103)||(49580039-49580142)
chr3 (1-103)||(53631879-53631982)
chr3 (171-239)||(40890203-40890271)
chr3 (1-119)||(42243346-42243465)
chr3 (1-103)||(44106802-44106905)
chr3 (1-103)||(48390827-48390930)
chr3 (1-101)||(49025658-49025758)
chr3 (1-103)||(4557315-4557418)
chr3 (1-103)||(34025929-34026032)
chr3 (1-52)||(35687501-35687552)
chr3 (5-103)||(42758349-42758448)
chr3 (1-101)||(10043292-10043393)
chr3 (1-101)||(34119633-34119734)
chr3 (1-104)||(23546952-23547056)
[»] chr2 (32 HSPs)
chr2 (1-248)||(35248395-35248638)
chr2 (1-248)||(35965166-35965413)
chr2 (57-248)||(29656802-29656993)
chr2 (59-239)||(34214726-34214905)
chr2 (9-239)||(30696764-30696995)
chr2 (1-239)||(25210217-25210456)
chr2 (1-248)||(34544320-34544569)
chr2 (16-236)||(40734609-40734829)
chr2 (65-213)||(13954611-13954759)
chr2 (65-213)||(14095818-14095966)
chr2 (136-239)||(31600914-31601017)
chr2 (142-248)||(35409304-35409409)
chr2 (1-103)||(37999459-37999562)
chr2 (1-103)||(14540757-14540860)
chr2 (1-103)||(35510453-35510556)
chr2 (1-93)||(43371539-43371632)
chr2 (7-59)||(3547187-3547239)
chr2 (1-104)||(45256798-45256902)
chr2 (1-103)||(13705371-13705474)
chr2 (1-103)||(44746119-44746222)
chr2 (99-208)||(40359215-40359324)
chr2 (59-116)||(4961520-4961577)
chr2 (1-93)||(38342529-38342622)
chr2 (1-103)||(9632362-9632465)
chr2 (1-103)||(24414142-24414245)
chr2 (38-103)||(10920621-10920687)
chr2 (1-69)||(6164483-6164552)
chr2 (35-103)||(19104885-19104954)
chr2 (1-69)||(37106702-37106771)
chr2 (8-103)||(8915954-8916050)
chr2 (1-101)||(10212386-10212485)
chr2 (1-41)||(37472769-37472809)
[»] chr1 (35 HSPs)
chr1 (1-230)||(39219107-39219337)
chr1 (1-248)||(42728954-42729201)
chr1 (99-239)||(13692484-13692624)
chr1 (30-248)||(41476991-41477209)
chr1 (57-222)||(36421623-36421788)
chr1 (99-224)||(8880303-8880428)
chr1 (49-239)||(25181043-25181235)
chr1 (1-237)||(25154837-25155074)
chr1 (136-239)||(45460190-45460293)
chr1 (9-123)||(48125701-48125816)
chr1 (135-229)||(11198294-11198389)
chr1 (188-248)||(14902972-14903031)
chr1 (178-231)||(16903369-16903422)
chr1 (1-93)||(35069899-35069992)
chr1 (1-119)||(13798198-13798317)
chr1 (1-103)||(29871295-29871398)
chr1 (1-103)||(29936392-29936495)
chr1 (1-103)||(49250783-49250886)
chr1 (1-59)||(12718782-12718840)
chr1 (178-248)||(14890994-14891063)
chr1 (1-93)||(23058452-23058545)
chr1 (1-41)||(17134986-17135026)
chr1 (100-177)||(5290408-5290489)
chr1 (1-103)||(16433177-16433277)
chr1 (1-103)||(19572522-19572625)
chr1 (1-103)||(24236771-24236874)
chr1 (1-103)||(36187230-36187333)
chr1 (1-59)||(19003676-19003734)
chr1 (41-115)||(39582334-39582408)
chr1 (1-41)||(3627995-3628035)
chr1 (1-97)||(9681790-9681886)
chr1 (2-93)||(10450070-10450162)
chr1 (1-72)||(10778577-10778649)
chr1 (1-69)||(42707847-42707915)
chr1 (165-205)||(48125847-48125887)
[»] scaffold1322 (1 HSPs)
scaffold1322 (83-248)||(943-1106)
[»] scaffold0244 (1 HSPs)
scaffold0244 (83-239)||(4673-4829)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-103)||(33368-33471)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-59)||(211384-211442)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-105)||(20749-20854)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-93)||(2954-3047)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-107)||(107408-107508)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-103)||(90572-90675)


Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 40187668 - 40187914
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||  ||||||||||||||||||||| ||    
T  40187668 ttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcacccaaactcatacccaaactcgtcccgaatatagaaaattaatt 40187767  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40187768 tattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcacttatcatagttct 40187867  T
Q  201 ctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||||||| ||||||||||||| ||||||| |||||| ||||||||    
T  40187868 ctcttatctcattccatatctcacactctcggtctctct-cttctcca 40187914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 7350448 - 7350642
Alignment:
Q  31 acgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatga 129  Q
    |||||||| || |||||| | |||||||| |||| |||||| ||| ||||| | ||| |||||||||| ||||||| | |||||||||||||||||||      
T  7350448 acgggtaatggggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcg 7350547  T
Q  130 aaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    ||| | |||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7350548 aaaccctaaatcattttactcacatagttagagtcgcaatctttgagacgacgctcacttatcatagttctctcttatctccttccatatctcac 7350642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 239
Target Start/End: Complemental strand, 29665043 - 29664810
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattactttatta 105  Q
    ||||||||||||||||||| |  || ||||||||| |||||| ||| ||||  ||||||||||| |||| ||||||||||| || ||||| | |||| ||    
T  29665043 ccgatttcaaaacacgggtacatgatgggtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttacta 29664944  T
Q  106 cctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctct 204  Q
    || ||||||| ||||||| || | ||| ||| ||||||||| | | |||| |||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  29664943 ccccttttatttaaatagaaactcaaactct-aaatcatttcatttacattgtcagagtctcagtatttcagatgacactcacttatcataattctctct 29664845  T
Q  205 tatctccttccatatctcacgctctcggcctctct 239  Q
    | |||| ||| |||||| || |||| |||||||||    
T  29664844 tttctctttcaatatctaacactcttggcctctct 29664810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18451896 - 18452120
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||| |||| || ||| ||||||  |||||  ||||||| ||| |||||| ||||||||| |||||  |||||||| | |||||||| | |    
T  18451896 ttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatcaat 18451995  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||| | ||||||||| ||||| |||   ||||||| ||||||| ||||||| ||| | ||||||  |||||||||||| | ||||||||||| ||||    
T  18451996 ttattatcccttttatattaatagaaatacgaatcttagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcacttatcatggttc 18452095  T
Q  200 tctcttatctccttccatatctcac 224  Q
    |||||| |||||||||||| |||||    
T  18452096 tctcttttctccttccataactcac 18452120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 239
Target Start/End: Complemental strand, 17153241 - 17153008
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactttatta 105  Q
    ||||||| |||||| |||| || ||||| ||||   ||||||||||  || ||| ||| ||||| |||| ||||||||||| |||||||| | |||||||    
T  17153241 ccgattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtagaaaatcaatttatta 17153142  T
Q  106 cctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctctt 205  Q
    || ||| || |||||||| |||  ||| | ||||| |||| ||||||| |||||||  |||| ||||||| |||| | ||||||||||||||||||| ||    
T  17153141 ccccttctagataaatagaaatccaaaacctaaataatttcactcacacagtcagatactcagtctttcaaatgagattcacttatcatagttctctatt 17153042  T
Q  206 atctccttccatatctcacgctctcggcctctct 239  Q
     ||| |||||||||||||| |||||| |||||||    
T  17153041 ttcttcttccatatctcacactctcgccctctct 17153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27900412 - 27900633
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||| ||||  | ||||||||| |  |||||| ||| ||| | ||||| ||||| |||||||| ||||||| || ||||| | |    
T  27900412 tttttcccgatttcaaaacatgggtatgggacgggtaatgtggatataggtacccatctcgaacccatacccaaatccgccccgaatgtataaaatcaat 27900511  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    ||||| |||||||||||||||||| ||   ||| | |||||||||| | ||||| | ||||| ||  | ||||||||||||||||||||||  |||||||    
T  27900512 ttatttcctcttttatataaatagaaactgaaaccctaaatcatttcagtcacacattcagaatc--agtctttcagatgacactcacttaatatagttc 27900609  T
Q  200 tctcttatctccttccatatctca 223  Q
    |||||||||||||| |||||||||    
T  27900610 tctcttatctccttacatatctca 27900633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 38973000 - 38972753
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||| ||||  | ||  ||||||||  ||||| ||| |||||| |||| |||||||||| || || | |||  | ||||| | |    
T  38973000 tttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataaaatcaat 38972901  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||| | ||||||||||||| | ||   ||| | |||||||||| | |||||  || ||||||| ||||||||| |||||||||||||||||||||||    
T  38972900 ttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatcatagttc 38972801  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||||||||||| ||||| |||| ||||| | |||||| ||||||||    
T  38972800 tctcttatctcctttcatatatcacactctctgtctctct-cttctcca 38972753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 35584112 - 35583957
Alignment:
Q  82 cgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgac 181  Q
    ||||| || ||||| | ||||||||| ||||||||||||||| ||   ||| | ||||||||||| |||||| ||||||||||||| ||||||||||| |    
T  35584112 cgaatgtacaaaatcaatttattacc-cttttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtc 35584014  T
Q  182 actcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctc 238  Q
    ||||| ||||||  ||||||| || ||||||| |||||| ||| |||||||| ||||    
T  35584013 actcatttatcactgttctctgttttctcctttcatatcccacactctcggcatctc 35583957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 457482 - 457603
Alignment:
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    ||||||||  ||||||||||||||| ||  |||||| |||||||||| ||| ||| ||    ||| |  ||||||||||||| ||||||||||||| |||    
T  457482 tttattacaccttttatataaatagaaaccaaaatcctaaatcatttcacttacagag----agtattgatctttcagatgatactcacttatcatcgtt 457577  T
Q  199 ctctcttatctccttccatatctcac 224  Q
    ||||||||||||||| ||||||||||    
T  457578 ctctcttatctccttacatatctcac 457603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 185
Target Start/End: Original strand, 16311310 - 16311488
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactttatta 105  Q
    |||||||||||||||| || |||||||| |||| | |||||| ||| ||| ||||||| |||| ||||| | ||| ||||| | |||||| | |||||||    
T  16311310 ccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaaaatcaatttatta 16311409  T
Q  106 cctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactc 185  Q
     | ||||||||||||||| ||   ||| | ||||||||||||||| || ||||  ||||||| |||||||| ||||||||    
T  16311410 tcccttttatataaatag-aaaccaaaccctaaatcattttactcgcagagtctcagtctcagtctttcagttgacactc 16311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 24207685 - 24207529
Alignment:
Q  80 cccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatg 179  Q
    ||||||| |||||||||| |||||||   ||||||||||||||  ||  |||| | ||||| | || |||||||     ||||||||| |||||||||||    
T  24207685 cccgaatgtagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaataacttcactcacact---agagtctcagtctttcagatg 24207589  T
Q  180 acactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||| |||||| ||||||||||||| ||||||||  |||||||| |||||  |||||||    
T  24207588 acactaacttataatagttctctcttttctccttcattatctcacactctcaacctctct 24207529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4920904 - 4920801
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||||||| ||||||| ||||| |||| ||||||| ||| || |||||||||    
T  4920904 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 4920805  T
Q  100 ttat 103  Q
    ||||    
T  4920804 ttat 4920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 12457537 - 12457371
Alignment:
Q  58 ccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagt 157  Q
    |||||||||||| |||| ||||||||||| |||||||| | ||||||||| |||| |||||||||| ||   |||   |||||||||| ||||||| | |    
T  12457537 ccgaactcatacccaaacccgtcccgaatgtagaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacacaat 12457438  T
Q  158 cagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    ||  |||| | ||| ||| ||||  ||||||| | | ||||||||||  ||||| ||||||||||||    
T  12457437 catggtcttagtctctcatatgaatctcacttcttaaagttctctctcttctccctccatatctcac 12457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15890284 - 15890182
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||| |||||||||||||||||||  | ||||||||||||  ||||| ||| |||||||||| ||||| || | ||||||| ||| || ||||||||||    
T  15890284 ttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccacccgaacccatacccatacccgtcccaaatgtaaaaaattactt 15890185  T
Q  101 tat 103  Q
    |||    
T  15890184 tat 15890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12773832 - 12773925
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||| ||||| |||||||||| ||  ||||||| ||||||    
T  12773832 ttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatactcaaaccctacccgaatgtagaaa 12773925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16366535 - 16366664
Alignment:
Q  77 cgtcccgaatatagaaaattactttattac-ctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttc 174  Q
    |||||||||| |||||||||| |||||||| | |||||||||||| || || | |||| | ||||||||||   ||||| | ||||| |||||  || ||    
T  16366535 cgtcccgaatgtagaaaattattttattactcccttttatataaaaagaaactcaaaaccataaatcatttccgtcacacaatcagaatctcagcctatc 16366634  T
Q  175 agatgacactcacttatcatagttctctct 204  Q
    ||||||||||||||||||| ||||||||||    
T  16366635 agatgacactcacttatcagagttctctct 16366664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 35194014 - 35194103
Alignment:
Q  15 aaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaa-ctcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||||||||||  | ||||||||||||  ||||| ||| |||||| || |||||||||||| ||||||||||| ||||||||||||||||    
T  35194014 aaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaattactttat 35194103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23045002 - 23045060
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| || || |||||||||||||||||||| ||||||    
T  23045002 ttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccc 23045060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32574949 - 32575071
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||| | | || || |||||||   |||||||||| ||| ||||||| || || |||| ||| ||||||| ||||| || | |    
T  32574949 ttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtagaatatcaat 32575048  T
Q  100 ttattacctcttttatataaata 122  Q
    |||||||| ||||||||||||||    
T  32575049 ttattaccccttttatataaata 32575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 6810236 - 6809995
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||| | ||||||||| ||  ||||||||||  |||||| |||  ||||| |||| ||||| |||| || ||||||||   |||||| | |    
T  6810236 ttttccccgattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccatacccaaacccatcccgaatggtgaaaatcaat 6810137  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    ||||| || ||||||||| ||||| ||   ||| ||||||| |||| ||||||| | ||      ||  | |||||| |||| || | ||||||||||||    
T  6810136 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatc------tcggtatttcagttgacccttatttatcatagttc 6810043  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||| ||||||||||| ||||||  | ||||||||||| ||||||||    
T  6810042 tctcttttctccttccatgtctcacaatttcggcctctct-cttctcca 6809995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12712568 - 12712661
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||| ||||| ||||| |||| ||  ||||||| ||||||    
T  12712568 ttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatacccaaaccctacccgaatgtagaaa 12712661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18207096 - 18206997
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||| |||||||||||| || ||  | ||| |||||| |  ||||| ||| |||||||||| |||| ||||| ||||||||||| |||||||||||||    
T  18207096 ttttcctcgatttcaaaactcgtgtatgggacaggtaacaggtatataggtacccacccgaacccatattcaaacccgtcccgaatgtagaaaattactt 18206997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38006480 - 38006583
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| ||||||||| ||||||  | |||| ||||| || ||||| ||| |||||| |||| ||||| |||||||||||||||| | |||||||| |    
T  38006480 ttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaat 38006579  T
Q  100 ttat 103  Q
    ||||    
T  38006580 ttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42987490 - 42987593
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | |||| |||||||| ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || ||||||| |    
T  42987490 ttttccccgatctcaaaacacgggtatgggacgtgtaacggatatataggtacccatcccgaacccatacccaaacccgtcccaaatgtaaaaaattatt 42987589  T
Q  100 ttat 103  Q
    ||||    
T  42987590 ttat 42987593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 15564682 - 15564612
Alignment:
Q  33 gggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattacttta 102  Q
    |||||||||  |||| ||||| || ||||||||||||||||||  |||||||||| |||||||||||||||    
T  15564682 gggtaacgggtatatctgtattcatcccgaactcatactcaaactcgtcccgaatgtagaaaattacttta 15564612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 35311894 - 35311797
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||||||||||||||||||  | |||||||||| || ||||| ||| |||| |||||| |||||||| | ||||||| ||| || ||||||| |||||    
T  35311894 ccgatttcaaaacacgggtatgggacgggtaacagatatataggtacccactccgaacccatactcatacccgtcccaaatgtaaaaaattattttat 35311797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4583197 - 4583094
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||  ||| ||| ||| ||||| || | ||||||| ||| || |||||||||    
T  4583197 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccatacccatacccgtcccaaatgtaaaaaattact 4583098  T
Q  100 ttat 103  Q
    ||||    
T  4583097 ttat 4583094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5908699 - 5908802
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| || ||||||||||  | ||||||||||||  |||||||||  || ||| ||| ||||| |||| ||||||| ||| || |||||||||    
T  5908699 ttttccccgatctcgaaacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccatacccaaacccgtcccaaatgtaaaaaattact 5908798  T
Q  100 ttat 103  Q
    ||||    
T  5908799 ttat 5908802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17853304 - 17853406
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||| |||||||  | ||||||||||||| |||||  || |||| |||||| ||||| || | ||||||| ||| || |||||||||    
T  17853304 ttttccccgatttcaaa-cacgggtatgggacgggtaacggatatatagatacccactccgaacccatacccatacccgtcccaaatgtaaaaaattact 17853402  T
Q  100 ttat 103  Q
    ||||    
T  17853403 ttat 17853406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28569032 - 28569090
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||||||||||||  ||||| || |||||||||||| |||||| ||| ||||||    
T  28569032 ttttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccc 28569090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 6092559 - 6092632
Alignment:
Q  31 acgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||||||||||  ||||| ||| |||||| |||| ||||| |||||||||||| ||| || |||||||||||||    
T  6092559 acgggtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattactttat 6092632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 28045704 - 28045631
Alignment:
Q  30 gacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    ||||||||||||  ||||| ||| |||||||||| ||||| || | ||||||| ||| || |||||||||||||    
T  28045704 gacgggtaacgggtatataggtacccacccgaacccatacccatacccgtcccaaatgtaaaaaattactttat 28045631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 18116547 - 18116591
Alignment:
Q  31 acgggtaacggagatatatgtatcca-cccgaactcatactcaaa 74  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||    
T  18116547 acgggtaacggggatatatgtatccaccccgaactcatacccaaa 18116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 43523807 - 43523763
Alignment:
Q  31 acgggtaacggagatatatgtatcca-cccgaactcatactcaaa 74  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||    
T  43523807 acgggtaacggggatatatgtatccaccccgaactcatacccaaa 43523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8843816 - 8844032
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||| |||||||| ||||||| |||||| |||||||| ||| ||||||  || |||||||||||||||| |||| |||||  |||| |||||||||| ||    
T  8843816 tttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccacccgaactcatacccaaacccgtcgtgaatgtagaaaattaatt 8843915  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    ||||||| |||| |||||||||| ||   ||||| |||||||||| ||||||| ||||| ||||| |  |||||||||||||||||||||||||||||||    
T  8843916 tattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttct 8844015  T
Q  201 ctcttatctccttccat 217  Q
    ||||| |||||||||||    
T  8844016 ctcttttctccttccat 8844032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8856780 - 8856996
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||| |||||||| ||||||| |||||| |||||||| ||| ||||||  || |||||||||||||||| |||| |||||  |||| |||||||||| ||    
T  8856780 tttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccacccgaactcatacccaaacccgtcgtgaatgtagaaaattaatt 8856879  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    ||||||| |||| |||||||||| ||   ||||| |||||||||| ||||||| ||||| ||||| |  |||||||||||||||||||||||||||||||    
T  8856880 tattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttct 8856979  T
Q  201 ctcttatctccttccat 217  Q
    ||||| |||||||||||    
T  8856980 ctcttttctccttccat 8856996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 33616209 - 33616361
Alignment:
Q  83 gaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgaca 182  Q
    |||| |||||||| | ||||||||| ||||||||||||||  ||| |||| | |||||||||| ||||||| ||||||||||| ||| ||||| ||||||    
T  33616209 gaatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatgaca 33616308  T
Q  183 ctcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  33616309 ctcacttatcatagttctctcttttctccatccatatctcacactctcggcct 33616361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 36306869 - 36306622
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| |||||||||||||||||||  ||||||| |||||| |||||| ||| | | ||||||   | ||||||| ||||||||||| |||||||| | |    
T  36306869 ttttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaaatcaat 36306770  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||||| ||||||||||||||| |||  ||||| |||||||||| ||| ||| | | ||||||||| ||||| |||||||||||  |||||||| ||     
T  36306769 ttattaccccttttatataaatagaaatcgaaatcataaatcatttcacttacacaattagagtctcagtctttgagatgacactcggttatcatattta 36306670  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
     |||||||||| |||| ||||| || |||||||||||||| ||||||||    
T  36306669 actcttatctctttccttatctaacactctcggcctctct-cttctcca 36306622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 42907970 - 42907734
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| |||| |||||||||||| | || |||| |||| || |||||| ||| |||||| || | ||||| ||||  |||||||||| |||||||| | |    
T  42907970 ttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaat 42907871  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    ||| ||| |||||||||||||||| ||   ||| | |||||||||| ||||| | ||| ||||||| | ||||||||||||||| |||||||||||||||    
T  42907870 ttactac-tcttttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcatagttc 42907772  T
Q  200 tctcttatctccttccatatctcacgctctcggcctct 237  Q
    | |||| |||||||||||||||||| |||| |||||||    
T  42907771 tatcttttctccttccatatctcacactcttggcctct 42907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 17113096 - 17113260
Alignment:
Q  82 cgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgac 181  Q
    ||||| |||||||| | |||||||| ||||| |||||||||  ||   |||||||||||||||| |||| || ||||||||||||| |||||||||||||    
T  17113096 cgaatgtagaaaatcaatttattac-tctttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgac 17113194  T
Q  182 actcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||||||||||||||| |||||| | |||||||||||||||| ||||| ||| |||| ||||||||    
T  17113195 actcacttatcatagttatctcttttttccttccatatctcacactctcagcccctct-cttctcca 17113260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 25265240 - 25265394
Alignment:
Q  82 cgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgac 181  Q
    ||||| |||||||| | ||||||| | ||| ||||||||||| ||   ||||  |||||||||||||||||| | ||||||||||||| |||||||||||    
T  25265240 cgaatgtagaaaatcaatttattatc-cttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtctcaatttttcagatgac 25265338  T
Q  182 actcacttatcatagttctctcttatctccttccatatctcacgctctcggcctct 237  Q
    | || ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  25265339 agtcgcttatcatagttctctcttttctccttccatatctcacactttcggcctct 25265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 230
Target Start/End: Original strand, 9280957 - 9281130
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatag 156  Q
    ||||||||||||||||||   |||| ||||||||||||| | ||||||| | |||||||||| |||| |||  ||| | |||||||||  | | ||| |     
T  9280957 cccgaactcatactcaaacttgtcctgaatatagaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatcattacattgacaaaa 9281056  T
Q  157 tcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctc 230  Q
    | |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| |||||    
T  9281057 ttagagtctcaatctttcagataacattcacttatcatagtactctcttttctccttccatatctcacactctc 9281130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 233
Target Start/End: Complemental strand, 30034700 - 30034525
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatag 156  Q
    ||||||||||||| |||||||||| ||||| |  ||||| | |||| |||||| ||||||||||||| ||   ||| | |||||||||| ||||| | ||    
T  30034700 cccgaactcatac-caaatccgtctcgaatgttaaaaatcaatttactacctcatttatataaatagaaacccaaaccctaaatcatttcactcataaag 30034602  T
Q  157 tcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggc 233  Q
    | |||||| ||||||||||  |||||||| |||||||||||| |||||| |||||||||||||||||| || |||||    
T  30034601 tgagagtcacaatctttcaagtgacactcgcttatcatagttttctcttttctccttccatatctcacactttcggc 30034525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 12075651 - 12075879
Alignment:
Q  10 atttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaa-ctcatactcaaatccgtcccgaatatagaaaattactttattacct 108  Q
    |||||||||||||||| || ||| |||||  | || ||||||| |||||| || ||| ||||||||  ||||| |||| |||||||| | |||||||||     
T  12075651 atttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattaccc 12075750  T
Q  109 cttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatc 208  Q
     |||||||||||||| ||  ||||   | |||||||| || |||| ||| ||||| ||| | ||| ||||||||  ||||||| ||||||||||||| ||    
T  12075751 attttatataaatagaaactaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttc 12075850  T
Q  209 tccttccatatctcacgctctcggcctct 237  Q
    |||||| ||||||||| ||||||| ||||    
T  12075851 tccttctatatctcacactctcggtctct 12075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 21713993 - 21714210
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaa-ctcatactcaaatccgtcccgaatatagaaaattactttattac 106  Q
    |||||| |||||| | || || || ||||||  ||| |||||||| |||||| || |||||||  |||  |||| | ||| |||||||||| ||||||||    
T  21713993 cgattttaaaacatgagtacgtgatgggtaatcgaggtatatgtacccaccctaaactcatacctaaactcgtctcaaatgtagaaaattaatttattac 21714092  T
Q  107 ctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctctta 206  Q
    ||||||||||||||||| ||   ||| | |||||||||| ||| ||| | | ||||||||| ||| ||| ||||||||||||| |||||||||||||||     
T  21714093 ctcttttatataaatagaaactcaaaccctaaatcatttcacttacacaattagagtctcagtctctcaaatgacactcacttctcatagttctctcttt 21714192  T
Q  207 tctccttccatatctcac 224  Q
    |||| || | ||||||||    
T  21714193 tctcttttcgtatctcac 21714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 248
Target Start/End: Original strand, 9929235 - 9929426
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacata 155  Q
    ||||||||| ||| ||||  ||||| |||  |||||||| | |||||||||||||  |||||||||  || ||||| ||| |||| |||| ||||||| |    
T  9929235 cccgaactcttacccaaaatcgtcctgaaagtagaaaatcaatttattacctcttccatataaatataaactgaaactct-aaataatttcactcacaca 9929333  T
Q  156 gtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||||||||  ||||| |||| ||| ||||||||||||||||||||||||||| ||| || |||||| || |||||| ||||  |||||||    
T  9929334 gtcagagtctcggtcttttagataacaatcacttatcatagttctctcttatctcattcaatctctcacactatcggcccctctctttctcca 9929426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 25298852 - 25299067
Alignment:
Q  9 gatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacc 107  Q
    ||||||||||||||||| || || |||||| || ||||||  | ||||||| |||| ||||| |||| |||| || ||| | |||||| | ||||| |||    
T  25298852 gatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccgaacccatacccaaacccgtaccaaatgttgaaaatcaatttatcacc 25298951  T
Q  108 tcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttat 207  Q
     ||||| ||||||||| | | ||| ||| ||||||||| ||||| |  || |||||| ||||||||||| ||||||| | |||||||| || |||||| |    
T  25298952 ccttttttataaatagaactcaaactct-aaatcatttcactcataacgttagagtcgcaatctttcagttgacacttatttatcataattttctctttt 25299050  T
Q  208 ctccttccatatctcac 224  Q
    |||||||||||||||||    
T  25299051 ctccttccatatctcac 25299067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 21956831 - 21957048
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttatta 105  Q
    ||||||| ||||||||||| ||  | | ||||||| |||||| ||  |||||| |||| ||||| ||||  |||  ||||| |||||||| | |||||||    
T  21956831 ccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaaaatcaatttatta 21956930  T
Q  106 cctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctctt 205  Q
    || ||||||||||||||  ||   ||| | |||||||||| | || || ||||||||| ||| ||||| |||||||||||| ||||||||||| | ||||    
T  21956931 cc-cttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatcatagttatatctt 21957029  T
Q  206 atctccttccatatctcac 224  Q
     ||||||||||||||||||    
T  21957030 ttctccttccatatctcac 21957048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 33516097 - 33516313
Alignment:
Q  15 aaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacctctttt 113  Q
    ||||||||||| ||||| ||||||| | |||||| ||| |||||| ||||  |||| |||| ||||| | ||| || ||||| | | ||||||| |||||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacccctttt 33516196  T
Q  114 atataaatagtaatgaaaatcttaaatcattttactcacata-gtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctcct 212  Q
    |||||||||  ||   ||| | |||||||||| |||||||   || |||||||   ||||||||||||||||||||||||||| ||||||||| ||||||    
T  33516197 atataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttttctcct 33516296  T
Q  213 tccatatctcacgctct 229  Q
    || |||| |||| ||||    
T  33516297 tctatatatcacactct 33516313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 37926508 - 37926408
Alignment:
Q  135 ttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcc 234  Q
    ||||||||||| ||||||| ||| | ||||||| |||||  ||||||| ||||||||||||||||||| || |||||||||||||||||| |||||| ||    
T  37926508 ttaaatcatttaactcacacagttaaagtctcagtcttt--gatgacagtcacttatcatagttctctattttctccttccatatctcacactctcgacc 37926411  T
Q  235 tct 237  Q
    |||    
T  37926410 tct 37926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 25941222 - 25940977
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||||||||||||| || ||| ||||||||  | ||| ||| |||||| |||| ||||| ||||   ||| || || |||||||| | |    
T  25941222 tttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaacatgtctcggatgtagaaaatcaat 25941123  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||| ||| ||||||||||||||| ||   ||  | ||||||| || |||||||   ||| ||||| | |||||||||||||| ||||||||||||||      
T  25941122 ttataaccccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatcatagt-- 25941025  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||| || |||||||||| |||| || |||||||| ||||| ||||||||    
T  25941024 tctattttctccttccaaatcttacactctcggcttctct-cttctcca 25940977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 10302168 - 10302044
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||  ||||||  |||||||||||||| | |||||||| ||| ||||||| ||||| || ||||||||| ||| || |||||||||    
T  10302168 ttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgtacccaccccgaacccatacccatatccgtcccaaatgtaaaaaattact 10302069  T
Q  100 ttattacc-tcttttatataaatag 123  Q
    || |||||  |||||||||||||||    
T  10302068 tttttaccaccttttatataaatag 10302044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 7334330 - 7334433
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||||||| ||| | ||||||| ||||| || ||||| | | |||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  7334330 taaatcatttcactcacacagttaaagtctcagtcttttagttgacatttatttatcataattctctcttttctccttccatatctcacaatctcggcct 7334429  T
Q  236 ctct 239  Q
    ||||    
T  7334430 ctct 7334433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15733537 - 15733611
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaa 74  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  15733537 ttttcctcgatttcaaaatacgggtacgagacgggtaacggagatatatgtacccaccccgaactcgtactcaaa 15733611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 39086241 - 39086040
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaa-tc-cgtcccgaatatagaaaatta 97  Q
    ||||| ||||||||| |||| |||||||  ||||||||||| |||||| ||| | ||   ||||||||||||||| || | || | ||  |||||||| |    
T  39086241 ttttctccgatttcacaacatgggtgcggtacgggtaacggggatataggtacctacagtgaactcatactcaaactctcatcacaaaagtagaaaatca 39086142  T
Q  98 ctttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagt 197  Q
     |||| ||||| |||||||||||||| ||   ||| | |||||||||| ||||||| ||||||| ||||| | |||||||||||||| ||||||||||||    
T  39086141 atttactacct-ttttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacacttacttatcatagt 39086043  T
Q  198 tct 200  Q
    |||    
T  39086042 tct 39086040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 23927659 - 23927879
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattac 106  Q
    ||||||||||||||  || | |||||| ||||   |||||| |||||||||| |||| | ||| ||||  | || ||||| |||||||||| ||||||||    
T  23927659 cgatttcaaaacacaagtacaagacggttaacatggatataggtatccaccccgaacccctacccaaactcatctcgaat-tagaaaattaatttattac 23927757  T
Q  107 ctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctctta 206  Q
    ||||||  ||||||||  |||  ||| | ||||| |||| ||||||| | | ||| ||||||| |||| ||||||| ||||||| |||| |||||||||     
T  23927758 ctctttattataaata--aatccaaaccataaataatttcactcacacacttagaatctcaatttttcggatgacaatcacttaacataattctctcttt 23927855  T
Q  207 tctccttccatatctcacgctctc 230  Q
    |||| |||||||||| || |||||    
T  23927856 tctcattccatatcttacactctc 23927879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 36919119 - 36918969
Alignment:
Q  88 tagaaaattactttattacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactca 186  Q
    |||||||| | ||||||||| ||||||||||||||| || | ||| ||| ||||||||| ||||||| ||| |||||||||  |||||||||||||  ||    
T  36919119 tagaaaatcagtttattaccacttttatataaatagaaactcaaactct-aaatcatttcactcacacagt-agagtctcagactttcagatgacatcca 36919022  T
Q  187 cttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||| ||||| |||||| || ||||||| |||   |||| ||||||||||||||    
T  36919021 cttgtcatatttctcttttttctccttacatgcgtcacactctcggcctctct 36918969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 35304663 - 35304764
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| || |||| || | |||||||| |||||||| |||   |||||||||  |||||||| || |||||||||||||||||| ||||||||||    
T  35304663 taaatcatttcacccacagagccggagtctcagtctttcaggtgatgatcacttatcgcagttctcttttttctccttccatatctcacactctcggcct 35304762  T
Q  236 ct 237  Q
    ||    
T  35304763 ct 35304764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 40420676 - 40420825
Alignment:
Q  80 cccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatg 179  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||| ||  |||| |  |||||||||          |||||| ||  | ||||||| | |    
T  40420676 cccgaatgtagaaaatcactttattaccccttttatataaatagaaaccaaaaccccaaatcattt----------gtcagaatcatagtctttcaaacg 40420765  T
Q  180 acactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    |||||||||||||||| || |||||| ||||||||||||||||||  ||| |||||||||    
T  40420766 acactcacttatcatacttttctcttttctccttccatatctcacattcttggcctctct 40420825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1724321 - 1724424
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||| ||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| |||||||||||  |||||| ||||    
T  1724321 ttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaacccgtcccgaatgcagaaaactact 1724420  T
Q  100 ttat 103  Q
    ||||    
T  1724421 ttat 1724424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12825472 - 12825575
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||| ||||| ||| |||||| ||||  |||| |||| | ||||||| |  |||||||||||    
T  12825472 ttttccccgatttcaaaacacgggtatgggacgggtaacggatatatacgtacccaccctgaacctatacccaaacctgtcccgagtgcagaaaattact 12825571  T
Q  100 ttat 103  Q
    ||||    
T  12825572 ttat 12825575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29527896 - 29527838
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||| ||||||    
T  29527896 ttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccaccc 29527838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3505352 - 3505121
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| |||| |||| | |||| ||| |||||| |||| |||||| |||  ||||| |||   |||| |||| | || ||| ||||||||||| | |    
T  3505352 ttttccccaattttaaaatatgggtacgaaacgggttacggggatataggtactcaccctgaatatatacacaaacctgttccgcatatagaaaatcaat 3505253  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagt-- 197  Q
    |||||||  ||||||| ||||||| |||  |||   || ||||||| | |||||  || ||||||||||||| ||| ||||||||||||| | | |||      
T  3505252 ttattactccttttatctaaatagaaattcaaactctagatcatttcattcacaccgttagagtctcaatctctcatatgacactcacttcttagagttc 3505153  T
Q  198 tctctcttatctccttccatatctcacgctct 229  Q
    |||||||  |||||||||||||||||| ||||    
T  3505152 tctctctcttctccttccatatctcacactct 3505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 4652673 - 4652605
Alignment:
Q  171 tttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    |||||||||||| ||| || ||||  ||||||||| ||||||| |||||||||| ||||||||||||||    
T  4652673 tttcagatgacattcatttctcattcttctctcttttctccttgcatatctcacactctcggcctctct 4652605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 24474965 - 24475049
Alignment:
Q  140 tcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    |||||| ||||| | | ||| ||||||| ||||||||||||||||||||| ||  ||||||||||  |||||||||| |||||||    
T  24474965 tcatttcactcatacaatcaaagtctcagtctttcagatgacactcacttctctaagttctctctcttctccttccacatctcac 24475049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 55783510 - 55783402
Alignment:
Q  78 gtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcaga 177  Q
    ||||| |||||||||||| |||| |||||||||||||||| ||||| ||   ||||| |||||||||| |||| || ||| ||||  ||||||| |||||    
T  55783510 gtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatttcactctcaaagttagag--tcaatctatcaga 55783413  T
Q  178 tgacactcact 188  Q
     ||||| ||||    
T  55783412 cgacacccact 55783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 55847692 - 55847584
Alignment:
Q  78 gtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcaga 177  Q
    ||||| |||||||||||| |||| |||||||||||||||| ||||| ||   ||||| |||||||||| |||| || ||| ||||  ||||||| |||||    
T  55847692 gtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatttcactctcaaagttagag--tcaatctatcaga 55847595  T
Q  178 tgacactcact 188  Q
     ||||| ||||    
T  55847594 cgacacccact 55847584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1866560 - 1866618
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||| ||||||||||||| |||||| |||||||||||| |  |||||||||||||||||    
T  1866560 tttttcccgatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccc 1866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14605936 - 14605994
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||| |||||||||||| |||||| ||||||||||||| | |||||||||| ||||||    
T  14605936 ttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccc 14605994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 43893311 - 43893209
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||| || ||||||||||  | ||||||||||||  ||||| ||||||| |||||| |||||| |||| ||||||| ||| || |||| |||||    
T  43893311 tttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaattcatacccaaacccgtcccaaatgtaaaaaactactt 43893212  T
Q  101 tat 103  Q
    |||    
T  43893211 tat 43893209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 53906791 - 53906924
Alignment:
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    ||||||| ||||||||||||||| |||  ||| ||||| | |||| ||||||||||||| ||||||| |     | |||||| ||| || || | |||||    
T  53906791 tattaccccttttatataaatagaaatcgaaaccttaagttatttcactcacatagtcaaagtctcact-----atatgacaatcagttgtcttggttct 53906885  T
Q  201 ctcttatctccttccatatctcacgctctcggcctctct 239  Q
    |||||||||||||  ||||||||| ||| || |||||||    
T  53906886 ctcttatctccttttatatctcacactcccgacctctct 53906924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10574430 - 10574523
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcc-acccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||||||||||| || || ||| || |||||||||||| |||||||||| ||  ||||||||||||| |||| ||  ||||||| ||||||    
T  10574430 ttttccccgatttcataatacaggtacgggacgggtaacggggatatatgtacccgccccgaactcatacccaaaccctacccgaatgtagaaa 10574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11028157 - 11028053
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatat-agaaaattac 98  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||||||||| |||| | ||||| ||| | | ||||||||    
T  11028157 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaacctgtcccaaatgtaaaaaaattac 11028058  T
Q  99 tttat 103  Q
    |||||    
T  11028057 tttat 11028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5902625 - 5902728
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| || ||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||| ||||    
T  5902625 ttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 5902724  T
Q  100 ttat 103  Q
    ||||    
T  5902725 ttat 5902728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 8844041 - 8844076
Alignment:
Q  170 ctttcagatgacactcacttatcatagttctctctt 205  Q
    |||||||||||||||||||||||||||||| |||||    
T  8844041 ctttcagatgacactcacttatcatagttccctctt 8844076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 8857005 - 8857040
Alignment:
Q  170 ctttcagatgacactcacttatcatagttctctctt 205  Q
    |||||||||||||||||||||||||||||| |||||    
T  8857005 ctttcagatgacactcacttatcatagttccctctt 8857040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11122880 - 11122983
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| ||||| || ||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| |||||||||| ||||||| ||| || |||| ||||    
T  11122880 ttttctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaactact 11122979  T
Q  100 ttat 103  Q
    ||||    
T  11122980 ttat 11122983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19883067 - 19883162
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaat 95  Q
    ||||||||||||| ||||||||| | || || ||||||||| |||||| ||||||| |||||||  |||| ||||  |||||||||| || |||||    
T  19883067 ttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataaaat 19883162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31752540 - 31752437
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  |||||| ||||||   ||||| ||  ||| ||||||| ||||| || | ||||||| ||| || |||||||||    
T  31752540 ttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccatacccatacccgtcccaaatgtaaaaaattact 31752441  T
Q  100 ttat 103  Q
    ||||    
T  31752440 ttat 31752437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32585573 - 32585470
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| |||||||||||||||||||  | ||| ||||||||  ||||| ||| |||||| |||| ||||| |||| ||||||| ||| || ||| |||||    
T  32585573 ttttctccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgtaaaaacttact 32585474  T
Q  100 ttat 103  Q
    ||||    
T  32585473 ttat 32585470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32596195 - 32596298
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||  ||||| | ||||||||| ||||   ||| ||||| |||||||||| |    
T  32596195 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtccccacctcaaactcatacccaaacttgtctcgaatgtagaaaattatt 32596294  T
Q  100 ttat 103  Q
    ||||    
T  32596295 ttat 32596298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47550364 - 47550467
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | |||||||||| |  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || ||||||| |    
T  47550364 ttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattatt 47550463  T
Q  100 ttat 103  Q
    ||||    
T  47550464 ttat 47550467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 26564914 - 26564812
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||||||||||| |||||  | ||||||||||||  ||||| ||| ||| ||||||  ||||| |||| ||||||| |||  |||||| |||||    
T  26564914 tttccccgatttcaaaacgcgggtatgggacgggtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaactactt 26564815  T
Q  101 tat 103  Q
    |||    
T  26564814 tat 26564812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31782697 - 31782639
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| ||  || |||||||| |||||||||| ||||||    
T  31782697 ttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccc 31782639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45065333 - 45065240
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    |||||| ||||||||||| |||||| || |||| ||||| | |||||||||| ||| ||||||| ||||| |||| ||  ||||||| ||||||    
T  45065333 ttttcctcgatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaaccctacccgaatgtagaaa 45065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 30266347 - 30266399
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||| || |||||| |  |||||||||||| |||||||||||||||||    
T  30266347 ccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccc 30266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 30285841 - 30285789
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||| || |||||| |  |||||||||||| |||||||||||||||||    
T  30285841 ccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccc 30285789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 9402666 - 9402420
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||||||||||||| |||| |  ||||||||||   |||||| || ||||||||||| |||||||||| | ||| ||||| |||||||| | ||    
T  9402666 ttttccccgatttcaaaacatgggtacaggacgggtaacatggatataggtgtccacccgaacccatactcaaacctgtctcgaatgtagaaaatcaatt 9402567  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    || |||| | ||||||||||||| ||   ||| | |||||||||| ||||||| |||||||||||   ||||||| || |||||||||||||||||||||    
T  9402566 tagtaccccatttatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctaggtctttcatatcacactcacttatcatagttct 9402467  T
Q  201 ctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||| ||||||||||||||||||  | ||||||||||| ||||||||    
T  9402466 ctcttttctccttccatatctcacattttcggcctctct-cttctcca 9402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20349142 - 20348919
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | |||| ||||||| |||||| ||| |||||| |||||||||| |||||||||  | ||| || ||||||| |    
T  20349142 ttttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaaaattaat 20349043  T
Q  100 ttattacctcttttatataaa-tagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    |||||||   ||||||||||| ||  ||   ||| | ||||||| || |||||||   |||||||||    ||||||||||||||| |||||||||||||    
T  20349042 ttattacactttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttatcatagtt 20348945  T
Q  199 ctctcttatctccttccatatctcac 224  Q
    ||||||| ||||||||||||||||||    
T  20348944 ctctcttttctccttccatatctcac 20348919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 1947866 - 1948025
Alignment:
Q  65 catactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtc 164  Q
    ||||||||||  ||| || ||| |||||||| | ||||||||| ||||||||||||||  |||  ||| | ||| ||||| |||||||| |||||||||     
T  1947866 catactcaaactcgttccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaagtcattatactcacacagtcagagta 1947965  T
Q  165 tcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    ||   |||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||    
T  1947966 tctgactttcagatgacactcacttatcatagttccctcttttctactttcatatctcac 1948025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 34346015 - 34346261
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactc-atactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||| |||| |||||| ||   || ||||||| |||||| ||| ||||||  | || |||| ||||||||| |||||| |||||||||| |    
T  34346015 tttttcccgattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaattaat 34346114  T
Q  100 ttattacctcttttatataaat---------agtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcactta 190  Q
    |||||||  |||||||||||||         || ||   ||| | |||||||||| ||||||| ||||||||||||| ||||| |||||| | |||||||    
T  34346115 ttattactccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtcactta 34346214  T
Q  191 tcatagttctctcttatctccttccatatctcacgctctcggcctct 237  Q
    |||||||||| |||| ||| ||||||||||||||  |||||||||||    
T  34346215 tcatagttctatcttttcttcttccatatctcacattctcggcctct 34346261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 14321862 - 14321717
Alignment:
Q  83 gaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgaca 182  Q
    |||| |||||||||| |||||||||| |||||||||||||| ||   |||||||||||||||| |||||| | | || ||||||  ||||| ||||||||    
T  14321862 gaatgtagaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactcacgt-gacaaagtctcgttctttaagatgaca 14321764  T
Q  183 ctcacttatcatagttctctcttatctccttccatatctcacgctctc 230  Q
     |||||||||||| |||||| || ||||||| |||||||||| |||||    
T  14321763 atcacttatcataattctct-ttttctcctttcatatctcacactctc 14321717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 2126702 - 2126870
Alignment:
Q  71 caaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatc 170  Q
    ||||||| || |||||  ||||||| | ||||||||| |||||||||| |||| ||   ||   ||||||||||| ||| ||| ||| | ||||||  |     
T  2126702 caaatccatctcgaatgaagaaaataagtttattaccccttttatatagatagaaactcaagctttaaatcatttcacttacagagttaaagtctcggta 2126801  T
Q  171 tttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||| |||| ||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  2126802 ttttagatcacactcagttatcatagttctctcttttctccttccatatctcacactcttggcctctct 2126870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13769150 - 13768946
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||| ||||||||| ||||  | ||||||||||||| ||||| ||| |||||| |||| ||||  |||| |||||| |||| |||||||| | |    
T  13769150 ttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggtacccacccagaacccatatccaaacccgtcctgaatgtagaaaatcaat 13769051  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||||  ||||||||||||| | ||   ||| | ||||| |||| | | ||| ||||||| |||| |||| ||| ||||||||||||| ||| |||||    
T  13769050 ttattactccttttatataaattgaaactcaaaccataaattatttcagtaacacagtcagattctccatctctcatatgacactcacttctcagagttc 13768951  T
Q  200 tctct 204  Q
    |||||    
T  13768950 tctct 13768946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 24221543 - 24221455
Alignment:
Q  151 acatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||||||||| | ||||| |||||||||||||||||| |||||||||||| |||| ||||||| ||||| ||||| ||||||||    
T  24221543 acatagtcagagtcttagtctttaagatgacactcacttatcgtagttctctcttttctcgttccatagctcacactctcagcctctct 24221455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27738850 - 27738747
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | |||||||||| || ||||||||| ||| ||||||| ||||| |||| ||||||| ||| || |||||||||    
T  27738850 ttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 27738751  T
Q  100 ttat 103  Q
    ||||    
T  27738750 ttat 27738747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 198
Target Start/End: Complemental strand, 29341307 - 29341131
Alignment:
Q  28 gagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa---attactttattacctct--tttatataaat 121  Q
    ||||||||||||||||||||| ||| ||| ||| ||||||||| |||| ||||||||||| ||||||   |||  ||| ||||| ||  | |||||||||    
T  29341307 gagacgggtaacggagatataggtacccatcccaaactcatacccaaacccgtcccgaatgtagaaaatcattttttttttaccccttatctatataaat 29341208  T
Q  122 agtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    || ||   ||| | || ||||||| ||| | | ||||||| |||||||||||||||||||| |||||||||||||||    
T  29341207 agaaacccaaaccctatatcatttcacttatacagtcagattctcaatctttcagatgacaatcacttatcatagtt 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 10925454 - 10925700
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||| ||| |||||||||| |||| ||||| |||||| ||||||||| |||||||||| |||| |||||  |||  | | |||||| || |||| || ||    
T  10925454 tttctccgttttcaaaacatgggtacgagatgggtaatggagatataagtatccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatt 10925553  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    |||||   ||||||||||||||| |    ||| | |||||||||| ||| ||| | ||| ||| | | ||||||| | ||||||||||| ||  ||||||    
T  10925554 tattattccttttatataaatagaatctgaaaccctaaatcatttcactaacacaatcaaagttttagtctttcaaacgacactcacttctctaagttct 10925653  T
Q  201 ctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||  |||||||||||| ||||| | ||||| |||||| ||||||||    
T  10925654 ctctcttctccttccatacctcacaccctcggtctctct-cttctcca 10925700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 8320941 - 8321034
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctct 229  Q
    |||||||||| ||| ||| ||||||||||||  ||||||||| |||| ||||||||||||||| ||| || ||| | |||||||||||| ||||    
T  8320941 taaatcatttcacttacacagtcagagtctcggtctttcagacgacattcacttatcatagttatctattttcttcgtccatatctcacactct 8321034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32959938 - 32959782
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||  |||||||||||||||| ||  ||||||||||| |||||| ||||||| ||||||| ||||| ||||||||||   ||| |||||||| | |    
T  32959938 ttttccctaatttcaaaacacgggtacggaacgggtaacggggatataggtatccaccccgaacccatac-caaatccgtcataaatgtagaaaatcaat 32959840  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagt 157  Q
    |||||||| || ||||||||  |||||   ||| | ||||| |||||||| |||||||    
T  32959839 ttattacccctattatataagcagtaacccaaaccctaaattattttacttacatagt 32959782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32532618 - 32532515
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||| ||  ||||| ||| ||| ||||||| |||||||| | ||||||| ||| || |||||||||    
T  32532618 ttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaattact 32532519  T
Q  100 ttat 103  Q
    ||||    
T  32532518 ttat 32532515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32853922 - 32853819
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||||||||    
T  32853922 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 32853823  T
Q  100 ttat 103  Q
    ||||    
T  32853822 ttat 32853819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 16405460 - 16405524
Alignment:
Q  41 gagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttatt 104  Q
    ||||||||||||  ||||| ||||||||||||||| ||||||||||  |||||||||||||||||    
T  16405460 gagatatatgtacacaccctgaactcatactcaaacccgtcccgaaattagaaaattactttatt 16405524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28079706 - 28079782
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatc 76  Q
    |||||||||||||||||||| |||| || |||||||||||| |||||| ||| ||| ||||||| ||||| ||||||    
T  28079706 ttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaatc 28079782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2367404 - 2367301
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| |||  | |||||||||    
T  2367404 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatggaaaaaattact 2367305  T
Q  100 ttat 103  Q
    ||||    
T  2367304 ttat 2367301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11762523 - 11762420
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||| ||||| ||||  | ||||||||||||  ||||| || ||||||| |||||||||| |||| || |||| ||| ||||||||||||    
T  11762523 tttttcccgatttctaaacaagggtatgggacgggtaacgggtatataggtgtccaccccgaactcatacccaaacccatcccaaatgtagaaaattact 11762424  T
Q  100 ttat 103  Q
    ||||    
T  11762423 ttat 11762420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29199895 - 29199953
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| || |||||||||| | |||||||||||| ||||    
T  29199895 ttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatctaccc 29199953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 9458740 - 9458655
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaat 86  Q
    ||||||| ||||||||| |||||| || ||| | |||||| |||||||||| ||||| ||||||||||| |||||||  |||||||    
T  9458740 tttccccaatttcaaaatacgggtacgggacagataacggggatatatgtacccacctcgaactcatacccaaatcctacccgaat 9458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 20610993 - 20611050
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||||||||||| ||||||  | ||||||||||||  ||||||||||||||||    
T  20610993 tttccccgatttcaaaatacgggtaggggacgggtaacgggaatatatgtatccaccc 20611050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 256502 - 256622
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||| |||| |||||||||||| ||  ||||| ||| ||| ||| ||| ||||| |||| || |||  ||| |||||||| | |    
T  256502 ttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaaaatcaat 256601  T
Q  100 ttattacctcttttatataaa 120  Q
    ||| |||| ||||||| ||||    
T  256602 ttactaccccttttatttaaa 256622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 29340805 - 29340761
Alignment:
Q  193 atagttctctcttatctccttccatatctcacgctctcggcctct 237  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||    
T  29340805 atagttctctcttttctccttcgatatctcacactctcggcctct 29340761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5863393 - 5863496
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  |||||  || ||||| ||||| ||||| |||| ||||||| ||| || |||| || |    
T  5863393 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatgtaaaaaaatatt 5863492  T
Q  100 ttat 103  Q
    ||||    
T  5863493 ttat 5863496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 6366444 - 6366503
Alignment:
Q  43 gatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattacttta 102  Q
    |||||||||| ||| ||||||||||||||||| || || ||||| |||||||||| ||||    
T  6366444 gatatatgtacccatccgaactcatactcaaacccttctcgaatgtagaaaattatttta 6366503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12678104 - 12678207
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||| |||| |||  | ||||||||| ||  ||||| ||| |||||| |||| ||||| |||| |||||||||||  ||||||||| |    
T  12678104 ttttccccgatttcaagacacaggtatgggacgggtaaagggtatataggtacccaccctgaacccatacccaaacccgtcccgaattgagaaaattatt 12678203  T
Q  100 ttat 103  Q
    ||||    
T  12678204 ttat 12678207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7393897 - 7393971
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaa 74  Q
    |||||||||||||||||||||| ||  ||||||| ||| ||  ||||| ||||||| ||||||| ||||||||||    
T  7393897 ttttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccgaacccatactcaaa 7393971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 12309648 - 12309547
Alignment:
Q  3 ttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattacttt 101  Q
    ||||| |||||||||||||||||  |  ||||||||| |  ||||||||| ||| |||||||  |||| |||| ||||||| ||| || |||||||||||    
T  12309648 ttccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaacccgtcccaaatgtaaaaaattacttt 12309549  T
Q  102 at 103  Q
    ||    
T  12309548 at 12309547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14410865 - 14410946
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcc 81  Q
    ||||||| |||||||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||    
T  14410865 ttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcc 14410946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 29342114 - 29342158
Alignment:
Q  193 atagttctctcttatctccttccatatctcacgctctcggcctct 237  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||    
T  29342114 atagttctctcttttctcctttgatatctcacactctcggcctct 29342158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 5700434 - 5700187
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||||||||| |||  ||||| |||||||| ||||||  || ||||| ||||| ||||| ||||||| |||||||| || ||||||| |    
T  5700434 tttttcccgatttcaaaacacaggtatgagactggtaacggggatatagatacccacctcgaacccatacccaaatccatcccgaatgtataaaattaat 5700335  T
Q  100 ttattacctcttttatataaatagtaat-gaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    || ||||| ||||||||||||| | ||  |||| ||| ||||||||| |||| |||||||||||||| | ||||| |||||||| |||||||||||| ||    
T  5700334 tttttaccccttttatataaattgaaaccgaaactct-aaatcatttcactcccatagtcagagtcttagtcttttagatgacagtcacttatcataatt 5700236  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||||||||||||| |||||||||| || || |||||||| ||||||||    
T  5700235 ctctcttatctcctttcatatctcacactatctgcctctct-cttctcca 5700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 29918685 - 29918446
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||  || |   |||||||||  ||||||||||| |||||| |||  ||||| |||| ||||||| ||| || ||||| | |    
T  29918685 tttttcccgatttcaaaacacatgtacagaacgggtaacaaagatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaaaatcaat 29918586  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||||||||||||||||||||| ||   ||| | |||||||||| ||||||| ||| |||||||||||||||||||||||||| | ||||||||||||    
T  29918585 ttattacctcttttatataaatagaaactcaaaccctaaatcatttcactcacacagttagagtctcaatctttcagatgacacttagttatcatagttc 29918486  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctct 239  Q
    | |||| || |||||||||||| || |||||| |||||||    
T  29918485 tatcttttcgccttccatatcttacactctcgacctctct 29918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28345569 - 28345345
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||| |||||||||||| |  || ||||||||  |||||| | | |||||| |||| ||||| ||||   |||| |||| |||||||| | |    
T  28345569 ttttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaat 28345470  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
     ||||||| ||||||||||||||| ||   ||||  |||||||||| ||||||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  28345469 atattaccccttttatataaatagaaaccgaaattctaaatcatttcactcacacagtcatagtctcagtatttcagatgacactcacttatcatagttc 28345370  T
Q  200 tctcttatctccttccatatctcac 224  Q
    |||||||||||||||||||||||||    
T  28345369 tctcttatctccttccatatctcac 28345345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 30904123 - 30903875
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccga-actcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||| ||| |||||| | || ||||| |||||| ||||||||| |||||||| | ||    
T  30904123 tttcctcgatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccgaatgtagaaaatcaatt 30904024  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtc-agagtctcaa-tctttcagatgacactcacttatcatagtt 198  Q
    ||||||   |||||||||||||| ||  |||| |||||||||||| ||||||| |||| | |||||||| | ||||| |||||| ||| |||||||||||    
T  30904023 tattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtcaaaagtctcaattttttcaaatgacattcatttatcatagtt 30903924  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
     |||||| ||||| |  |||||| || || | ||||||||| ||||||||    
T  30903923 ttctcttttctccctatatatcttacactattggcctctct-cttctcca 30903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 8545359 - 8545583
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| |||||||||||||||||||  |  ||| ||||||| ||||||  || |||||| |||| ||||||||||  |||||| ||| |||||||| | |    
T  8545359 ttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaaaatcaat 8545458  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||  ||  |||||||||||| || |||  ||| | |||||||||| ||||| |||| |||||||||  ||||||| ||||||||||||||||||| |||    
T  8545459 ttacaactccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatcataattc 8545558  T
Q  200 tctcttatctccttccatatctcac 224  Q
    |||||| ||||||||||||||||||    
T  8545559 tctcttttctccttccatatctcac 8545583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 36274985 - 36274882
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||||||| ||||| ||||||  ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| |||| || ||    
T  36274985 taaatcatttcactcacacagtcaaagtctcggtctttcagatgacactcacttatcatagtcctcccttttctccttccatatctcacactctaggtct 36274886  T
Q  236 ctct 239  Q
    ||||    
T  36274885 ctct 36274882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 6388528 - 6388754
Alignment:
Q  3 ttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattacttta 102  Q
    ||||||||||| ||||||||||| | ||||||||||||| |||||| ||| |||          | |||||| || ||| |||| |||||||| | ||||    
T  6388528 ttccccgattttaaaacacgggtacaagacgggtaacggggatataggtaccca----------tgctcaaacccatcctgaatgtagaaaatcaattta 6388617  T
Q  103 ttacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctct 202  Q
    |||||  ||||||||||| || ||   ||| | |||||||||| ||||||| | | |||||||||  |||| | ||||||||||||||||||||||||||    
T  6388618 ttacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtctcagactttaaaatgacactcacttatcatagttctct 6388717  T
Q  203 cttatctccttccatatctcacgctctcggcctctct 239  Q
      | |||||||||||  ||||| ||||||||||||||    
T  6388718 tctttctccttccatgcctcacactctcggcctctct 6388754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 9476027 - 9476261
Alignment:
Q  5 ccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||||||||||||| |||| | || |||  ||||||| ||||||  || ||||| ||||| ||||| |||| || |||||||| ||||||||||  ||||    
T  9476027 ccccgatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattat 9476126  T
Q  104 tacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctct 202  Q
    |||| ||| ||||||||||| || ||||| || ||||| |||| ||||||| ||||||||||| | ||         |||| ||||||||||||||||||    
T  9476127 taccccttatatataaatagaaattgaaactc-taaattatttcactcacacagtcagagtcttagtc---------acacacacttatcatagttctct 9476216  T
Q  203 cttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||||| |||||| ||||||| |||||| ||||||| ||||||||    
T  9476217 cttatctacttccacatctcacactctcgacctctct-cttctcca 9476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 9642361 - 9642485
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | |||||||||||| | ||||| |||||| ||||||| |||||||| | ||||||| ||| || ||||||| |    
T  9642361 ttttccccgatttcaaaacacgggtatgggacgggtaacggggttatatatatccatcccgaacccatactcatacccgtcccaaatgtaaaaaattatt 9642460  T
Q  100 ttattacctc-ttttatataaatag 123  Q
    || ||||| | ||||||||||||||    
T  9642461 tttttacccctttttatataaatag 9642485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 27777208 - 27777443
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||||||||| ||| || ||| |||||| |||||| | ||| |||||| |||| ||||| ||||  ||  |   ||||| ||||| | |    
T  27777208 tttttcccgatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaactcgctctacatatataaaatcaat 27777307  T
Q  100 ttattacctctttta-tataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    |||||||| |||||  ||||||||| |||  |||   |||||||||||||| | | |||| |||| ||| | ||||||||||||||||||||||||||||    
T  27777308 ttattacccctttttgtataaatagaaatctaaactctaaatcattttacttaaacagtctgagtttcagtatttcagatgacactcacttatcatagtt 27777407  T
Q  199 ctctcttatctccttccatatctcacgctctcggcc 234  Q
    | ||| | |||||||| | |||||||  ||||||||    
T  27777408 cactcctttctccttcaaaatctcacaatctcggcc 27777443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 39379595 - 39379733
Alignment:
Q  6 cccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactttatta 105  Q
    |||||| ||||||||||||| || ||||||||| |  |||| | ||| |||||||||||||||||||||  |||||||||| ||| |||| | |||||||    
T  39379595 cccgatctcaaaacacgggtacgggacgggtaatgaggataaaagtacccacccgaactcatactcaaactcgtcccgaatgtagtaaatcaatttatta 39379694  T
Q  106 cctcttttatataaatagtaatgaaaatcttaaatcattt 145  Q
     | ||| | ||||||||| |||  ||||||||||||||||    
T  39379695 tc-cttctgtataaatagaaatccaaatcttaaatcattt 39379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17084117 - 17084350
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaa--tta 97  Q
    ||||| ||||||| ||||||||||| ||||||||||||||| ||||||  || |||||| |||||||||  |||| || || ||||| || ||||  | |    
T  17084117 ttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaacccatcacgaatgtaaaaaaaatca 17084216  T
Q  98 ctttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagt 197  Q
     ||||||  |  |||||||||||||  ||   ||  | ||||| |||   |||||| | ||||||| ||| ||||||| |||||| ||||||||||||||    
T  17084217 atttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaatcagagtttcagtctttcatatgacaatcacttatcatagt 17084316  T
Q  198 tctctcttatctccttccatatctcacgctctcg 231  Q
    | |||||| ||||||||||||| |||| ||||||    
T  17084317 tatctcttttctccttccatatttcacactctcg 17084350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15173890 - 15173986
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgt-cccgaatatagaaaatt 96  Q
    |||| ||||||||||||| |||||| || |||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| |||||||||    
T  15173890 tttttcccgatttcaaaatacgggtacgggacgggtaaatgagatatatgtatccacctcgaactcatactcaaa-ccgtacccgaatgtagaaaatt 15173986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 224
Target Start/End: Original strand, 29416263 - 29416412
Alignment:
Q  79 tcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaa-tcattttactcacatagtcagagtct----caatcttt 173  Q
    |||||||| |||||||||| ||||||||| ||||||||||||| ||||    |||| |||| |||||  |||||||  ||||||||||    ||  ||||    
T  29416263 tcccgaatttagaaaattaatttattacc-cttttatataaattgtaaccctaatcctaaaatcattccactcacaccgtcagagtctatctcagacttt 29416361  T
Q  174 cagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||| ||||||    
T  29416362 cagatgacactcacttatcatagttttctcttttctcctttcatgtctcac 29416412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40248381 - 40248484
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  ||||||| ||||||  ||||| ||| ||| ||||||| ||||| || ||||||||| ||| || |||||||||    
T  40248381 ttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccatacccatatccgtcccaaatgtaaaaaattact 40248480  T
Q  100 ttat 103  Q
    ||||    
T  40248481 ttat 40248484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2183616 - 2183709
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||| |||||||||||| |||||| |||||  ||||| ||||||||||||| ||| |||||||||||||||||| ||  ||||||| ||||||    
T  2183616 ttttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactcaaaccctacccgaatgtagaaa 2183709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27932491 - 27932388
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | |||| |||||||  ||||| ||| ||| ||||||| |||||||| ||||||||| ||| || ||||||| |    
T  27932491 ttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatactcatatccgtcccaaatgtaaaaaattatt 27932392  T
Q  100 ttat 103  Q
    ||||    
T  27932391 ttat 27932388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 12468229 - 12468394
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||| ||||||| |||||||||| ||||||  |||| || ||| || ||| | |||| |||||||||||||||| ||| |||||| |||||||| |      
T  12468229 ttttcctcgatttcgaaacacgggtacgagacatgtaatgg-gatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaaatcaac 12468327  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctc 166  Q
    ||||||||  ||||||||||| || || | ||||| ||||| |||| ||||| |  |||||||||||    
T  12468328 ttattaccctttttatataaagagaaacgcaaatcctaaattatttcactcatactgtcagagtctc 12468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1063585 - 1063482
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||||||  | ||||| ||||||  ||||| ||| |||||| |||||||||| ||||||| |||| | | || |||||||||    
T  1063585 tttttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcatacccaaatccatcccaagtgtaaaaaattact 1063486  T
Q  100 ttat 103  Q
    ||||    
T  1063485 ttat 1063482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14155610 - 14155491
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||||||   ||| ||||||||  ||||||| |||||| ||| || |||||| |||| || |||  ||| |||||||| | |    
T  14155610 tttttcccgatttcaaaacacgggtataagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaaaatcaat 14155511  T
Q  100 ttattacctcttttatataa 119  Q
    |||||||| |||||||||||    
T  14155510 ttattaccccttttatataa 14155491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24569016 - 24568913
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||| |||| ||||  | ||| |||| |||  ||||| |||||||||| |||| ||||||||||||||||||||||  |||||| ||||    
T  24569016 tttttcccgatttcacaacatgggtatgggacaggtagcgggtatataggtatccaccccgaacccatactcaaatccgtcccgaatggagaaaactact 24568917  T
Q  100 ttat 103  Q
    ||||    
T  24568916 ttat 24568913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15068598 - 15068655
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| || ||| |||||||| |||||||||||||||||    
T  15068598 ttttccccgatttcaaaatacgggtacgggacaggtaacgg-gatatatgtatccaccc 15068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 14186391 - 14186295
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    ||||||||||||||||||  | || |||||||||| ||||| |||  ||||| |||| ||||| |||| |||||| |||| |||||||||| |||||    
T  14186391 cgatttcaaaacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaacccgtcctgaatgtagaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43113636 - 43113736
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||||||||||||   | |||||||||| |  ||||| ||| |||||| |||||||||| |||||||||| |||||  |||||| ||||    
T  43113636 tttttcccgatttcaaaacacgggcatgggacgggtaacaggtatataggtacccaccccgaactcatacccaaatccgtctcgaatgcagaaaactact 43113735  T
Q  100 t 100  Q
    |    
T  43113736 t 43113736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 17469333 - 17469230
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||| ||| ||| ||| ||||| |||| ||||||| | |  |||||| ||||    
T  17469333 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaacccgtcccaactgcagaaaactact 17469234  T
Q  100 ttat 103  Q
    ||||    
T  17469233 ttat 17469230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24870034 - 24870137
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||| |||||||||||  | ||||||||||||  ||||| ||| ||| ||||| | |||||  ||| ||||||| ||| || |||||||||    
T  24870034 ttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccatacctaaacccgtcccaaatgtaaaaaattact 24870133  T
Q  100 ttat 103  Q
    ||||    
T  24870134 ttat 24870137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24928027 - 24927924
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||| ||| || ||||||||||  ||||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||| ||||    
T  24928027 ttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 24927928  T
Q  100 ttat 103  Q
    ||||    
T  24927927 ttat 24927924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29108832 - 29108935
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||| |||||| ||||  | ||||||||||||  ||||||||| ||| ||||||| ||||| || | ||||||| ||| || |||||||||    
T  29108832 tttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccatacccgtcccaaatgtaaaaaattact 29108931  T
Q  100 ttat 103  Q
    ||||    
T  29108932 ttat 29108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36131927 - 36132030
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| ||||||||||||| ||  | || |||||| ||  ||| | |||||||||| |||||||||| ||||||||||||||||  ||||| ||| |    
T  36131927 ttttcccctatttcaaaacacgagtatgggatgggtaaagggcatacaggtatccaccccgaactcatacacaaatccgtcccgaatgcagaaagttatt 36132026  T
Q  100 ttat 103  Q
    ||||    
T  36132027 ttat 36132030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 5793553 - 5793439
Alignment:
Q  110 ttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatct 209  Q
    |||||||||||||| ||   ||| | |||||||||| ||||||| |  || ||||| | |||||| || ||||||||||| |   ||||||||||| |||    
T  5793553 ttttatataaatagaaactcaaaccctaaatcatttcactcacacaaccaaagtctaagtctttctgacgacactcacttctttaagttctctcttttct 5793454  T
Q  210 ccttccatatctcac 224  Q
    ||||||| |||||||    
T  5793453 ccttccacatctcac 5793439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11472724 - 11472946
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||| |||||||||||||||  |||   ||| || ||||||  ||||| |||  |||| |||||||||| |||||||||||| |||  ||||||| | ||    
T  11472724 tttttcccgatttcaaaacagaggtataagatggataacgggaatataggtactcacctgaactcatacccaaatccgtcccaaatg-agaaaatcaatt 11472822  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    |||||   ||||||||||||||| ||  |||| | |||||||||| |||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  11472823 tattataccttttatataaatagaaaccaaaaccctaaatcatttcactcacgtagttagagtctcagtcttttagatgacactcacttatcatagttct 11472922  T
Q  201 ctcttatctccttccatatctcac 224  Q
    ||||||||||||||||||||||||    
T  11472923 ctcttatctccttccatatctcac 11472946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 3774126 - 3773913
Alignment:
Q  27 cgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagta 125  Q
    ||||||||||||||  |||||| ||| |||||| |||| |||||||||||||||||||||| |||||||| | ||||||||| ||||||||||| ||| |    
T  3774126 cgagacgggtaacgaggatataggtacccaccctgaacccatactcaaatccgtcccgaatttagaaaatcaatttattaccccttttatataattagga 3774027  T
Q  126 atgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacg 225  Q
    |   |||    ||||||||||||||||| ||||||||| |||  |||||| ||||||| || ||||||||||||| |||| ||||||| |||  |||||     
T  3774026 acccaaacgcaaaatcattttactcacacagtcagagtttcagactttcatatgacacccatttatcatagttctatcttttctcctttcatgcctcaca 3773927  T
Q  226 ctctcggcctctct 239  Q
    ||||||||||||||    
T  3773926 ctctcggcctctct 3773913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 37218079 - 37217848
Alignment:
Q  10 atttcaaaacacgggtgcgagacgggtaacggag-atatatgtatcca-cccgaactcatactc-aaatccgtcccgaatatagaaaattactttattac 106  Q
    |||||||||||| ||| || |||||||||||| | ||||| ||| | | ||||||||||||| | ||| |||||| ||||||||||||| | || ||||     
T  37218079 atttcaaaacacaggtacgggacgggtaacgggggatataagtaccaagcccgaactcataccccaaacccgtcctgaatatagaaaatcaatt-attat 37217981  T
Q  107 ctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctctta 206  Q
    ||||||| ||||||||| ||   ||  | |||||||||||||| ||| | ||||||||||  | ||||| ||||||||||| |||||||||||||||||     
T  37217980 ctcttttgtataaatagaaactcaatgcctaaatcattttactaacacaatcagagtctcggtttttcatatgacactcacatatcatagttctctcttc 37217881  T
Q  207 tctccttccatatctcacgctctcggcctctct 239  Q
    |||||||||||||||||| ||||||||||||||    
T  37217880 tctccttccatatctcacactctcggcctctct 37217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 3157166 - 3156927
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||| | ||||  | ||||| |||||| |||||| ||| |||| ||||||  |||| |||| ||||||| || ||||||||| | |    
T  3157166 ttttccccgatttcaaaatatgggtatgggacggataacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacatagaaaatcaat 3157067  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||||| ||  ||||||||||| ||   ||||| |||||| ||| |||| | ||||||||||||   ||||| ||||||||||||||||| |||||||    
T  3157066 ttattacccctactatataaatagaaacccaaatcctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcacttattatagttc 3156967  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctct 239  Q
    |||||| | ||||||||||| |||| ||||| ||||||||    
T  3156966 tctcttttttccttccatatgtcacactctccgcctctct 3156927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 43550427 - 43550662
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||||||| ||| ||||||| | | |||||| |||||  | ||||||||||  ||||||||||||||| |||| |||||| |||| | |||| |   ||    
T  43550427 ttttccccgtttttaaaacacagatacgagactggtaatagggatatatgtactcacccgaactcatacacaaacccgtcctgaatgtggaaagtctatt 43550526  T
Q  101 tattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttct 200  Q
    ||||||| ||| ||||||||||| ||   ||| | |||||||||| ||||| || |||||||||||| |||||||  | ||||| | |||||| | ||||    
T  43550527 tattaccccttctatataaatagaaacccaaaccctaaatcatttcactcaaat-gtcagagtctcagtctttcaattaacacttatttatcacatttct 43550625  T
Q  201 ctcttatctccttccatatctcacgctctcggcctct 237  Q
     |||| ||||||||||||||||||  |||||||||||    
T  43550626 ttcttttctccttccatatctcacaatctcggcctct 43550662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 23533751 - 23533854
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||| |||| | ||||||||||  | || || ||||||||||  |||||||||    
T  23533751 taaatcatttcactcacatagtcagagtctcagtgtttcagatgacactcatttattacagttctctctattttcatttcatatctcacattctcggcct 23533850  T
Q  236 ctct 239  Q
    ||||    
T  23533851 ctct 23533854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 224
Target Start/End: Complemental strand, 31345537 - 31345385
Alignment:
Q  72 aaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatc 170  Q
    ||||| ||||||||| || ||||| | |||| ||||  |||||||||||||| || | ||| ||| | ||||||| ||||||| | ||| ||||||| ||    
T  31345537 aaatctgtcccgaatgtaaaaaatcaatttactaccatttttatataaatagaaactcaaactct-atatcatttcactcacacaatcaaagtctcagtc 31345439  T
Q  171 tttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
     || ||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  31345438 atttagatgacactcacttatcataattctctcttttcttcttccatatctcac 31345385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23475273 - 23475475
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaatt-ac 98  Q
    |||| ||||||||||||||||||||  | || |||||| || |||||||||| ||||  ||||| ||||| |||| ||||||||||| || |||| | |     
T  23475273 tttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaa 23475372  T
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    |||| ||||  |||| ||||||||  ||   |||   |||||||||| |||||||||||||||||| || | |||||||||||||||| |||| | ||||    
T  23475373 tttactacccgttttgtataaataaaaacccaaactctaaatcatttcactcacatagtcagagtcccagtgtttcagatgacactcatttattacagtt 23475472  T
Q  199 ctc 201  Q
    |||    
T  23475473 ctc 23475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27850336 - 27850438
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||   |||| ||| ||| ||||||| ||||| |||| ||||||||||| ||||||||||||    
T  27850336 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgtagaaaattact 27850435  T
Q  100 tta 102  Q
    |||    
T  27850436 tta 27850438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 6557741 - 6557960
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaa--ttactttatt 104  Q
    ||||||| ||||||||||| ||||||| |||| | ||||||| | |  | || |||| ||||| |||||||||| |||||||| ||||  | | ||||||    
T  6557741 ccgatttaaaaacacgggtacgagacgagtaatgaagatataagaactctcctgaacgcatacccaaatccgtctcgaatataaaaaaaatcagtttatt 6557840  T
Q  105 acctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctc 203  Q
    | |  ||| ||| |||||| |  | ||| ||| ||||||||| ||||||| | ||| ||||||| ||||||||||||||||||||| ||  |||||||||    
T  6557841 atccttttcatagaaatagaatctcaaactct-aaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcacttctctaagttctctc 6557939  T
Q  204 ttatctccttccatatctcac 224  Q
    |  |||||||||| |||||||    
T  6557940 tcttctccttccacatctcac 6557960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19440020 - 19440260
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaatt-ac 98  Q
    ||||||| ||||| |||||||||||  | || |||||| || |||||||||| ||||  ||||| ||||| |||| ||||||||||| || |||| | |     
T  19440020 ttttccctgatttgaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaa 19440119  T
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    ||||  ||| ||||  ||||||||| ||   |||   |||||||||| ||||||||||||||||||||| | || ||||||||||||| |||| |  |||    
T  19440120 tttaccacccctttggtataaatagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgttccagatgacactcatttattacggtt 19440219  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||  | || || ||||||||||  | |||||||||||    
T  19440220 ctctctattttcatttcatatctcacattatcggcctctct 19440260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25979927 - 25980030
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||| |||  ||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||| | || ||| || ||||||| |    
T  25979927 ttttccccgatttcaaaacacaggtatgagacgggtaacggatatatatgtacccaccccaaactcatacccaaatcctttccaaatgtaaaaaattatt 25980026  T
Q  100 ttat 103  Q
    ||||    
T  25980027 ttat 25980030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 29292633 - 29292536
Alignment:
Q  142 attttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacg--ctctcggcctct 237  Q
    |||| ||| ||||||||||||||||  ||||| |||||||| ||||||||||||| ||||| || ||||||| || ||||||||  ||||||||||||    
T  29292633 atttcactaacatagtcagagtctcggtcttttagatgacaatcacttatcatagctctcttttttctcctttcaaatctcacgtactctcggcctct 29292536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41741460 - 41741562
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||||||||||||||||||  ||||||| ||||||  || || ||| |||||||||| |||| ||| | ||||||| ||| || ||||||||||    
T  41741460 ttttccccgatttcaaaacacgggtatgagacggataacgggtatgtaggtacccacccgaacccatattcatacccgtcccaaatgtaaaaaattactt 41741559  T
Q  101 tat 103  Q
    |||    
T  41741560 tat 41741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31426091 - 31425998
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||||||||| |||| ||||||  |||||||||||||| |||||||||||||| ||||||| ||||| |||| ||  ||||||| ||||||    
T  31426091 ttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaaccctacccgaatgtagaaa 31425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5377168 - 5377065
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||| |||  | ||||||||| ||  ||||| ||| |||||| |||| ||||| |||||| |||||||||  |||||||||||    
T  5377168 ttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaatctgtcccgaatgcagaaaattact 5377069  T
Q  100 ttat 103  Q
    ||||    
T  5377068 ttat 5377065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18684057 - 18683966
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatataga 91  Q
    |||||||||||||||||| |||||| || |||||||||| | |||||||||||||||| ||||| ||||| |||| ||  ||||||| ||||    
T  18684057 ttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaaccctacccgaatgtaga 18683966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30650714 - 30650611
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| || |||||||||||||  | ||||||||||||  ||||| ||| |||||| |||| ||||| |||||||||||| ||| || |||||||||    
T  30650714 ttttccccaatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattact 30650615  T
Q  100 ttat 103  Q
    ||||    
T  30650614 ttat 30650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16811812 - 16811710
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||||||||| |||||||||||||  ||||||| ||| ||  |||||  || |||||||||| ||||| |||| ||||||| ||| || ||||||||||    
T  16811812 ttttccccgatctcaaaacacgggtatgagacggataatgggtatatagatacccacccgaacccatacccaaagccgtcccaaatgtaaaaaattactt 16811713  T
Q  101 tat 103  Q
    |||    
T  16811712 tat 16811710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10072549 - 10072446
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  |  |||||||||||  ||||| ||| ||| ||||||| ||||| || | ||||||| ||| || |||||||||    
T  10072549 ttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccatacccataaccgtcccaaatgtaaaaaattact 10072450  T
Q  100 ttat 103  Q
    ||||    
T  10072449 ttat 10072446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16866252 - 16866149
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | |||| |||||||  ||||| ||| |||||| |||| ||||| |||| ||||||| ||| || |||||||||    
T  16866252 ttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 16866153  T
Q  100 ttat 103  Q
    ||||    
T  16866152 ttat 16866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25782917 - 25783020
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| ||||||  |||||||||||  ||||||| ||| ||  ||||| ||| |||||| ||||||||||  |||||||||||||||  |||||||||||    
T  25782917 ttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcataccaaaatccgtcccgaatgcagaaaattact 25783016  T
Q  100 ttat 103  Q
    ||||    
T  25783017 ttat 25783020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39317078 - 39316975
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||| ||||||||||||||||||  | |||||||| |||  ||||||||||||| || |||||||||| || ||||||| | ||| || ||||||| |    
T  39317078 ttttcctcgatttcaaaacacgggtatgggacgggtagcgggtatatatgtatccatcctgaactcatacccatatccgtctcaaatgtaaaaaattatt 39316979  T
Q  100 ttat 103  Q
    ||||    
T  39316978 ttat 39316975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18825882 - 18825984
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| | ||| |||| || |||| |||| ||||||||| |    
T  18825882 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaacccatcccaaatacagaaaattatt 18825981  T
Q  100 tta 102  Q
    |||    
T  18825982 tta 18825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 28309572 - 28309482
Alignment:
Q  4 tccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    |||| |||||||||| |||||| || ||||||||||||  ||||||||||| | ||||||||||||| |||| ||  ||||||| ||||||    
T  28309572 tccctgatttcaaaatacgggtacgggacgggtaacgggaatatatgtatctaccccgaactcatacccaaaccctacccgaatgtagaaa 28309482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32546275 - 32546182
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    |||| ||||||||||||| |||||| ||  ||||||||||| |||||||||| ||| ||||||| ||||| |||| ||  ||||||| ||||||    
T  32546275 tttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctacccgaatgtagaaa 32546182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3920621 - 3920518
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||| |||  | ||||| |||| |  ||||| ||| ||| ||||||| ||||| |||| | ||||||||| |||||||||| |    
T  3920621 ttttccccgatttcaaaacactggtatgggacggataacaggtatataggtacccaccccgaacccatacccaaaactgtcccgaatgtagaaaattatt 3920522  T
Q  100 ttat 103  Q
    ||||    
T  3920521 ttat 3920518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39456025 - 39456126
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||| ||||  | ||||||||||||  ||||| ||| ||| ||||||| |||||||| | ||||||| ||| || |||||||||    
T  39456025 ttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataggtacccaccccgaac-catactcatacccgtcccaaatgta-aaaattact 39456122  T
Q  100 ttat 103  Q
    ||||    
T  39456123 ttat 39456126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42908051 - 42908102
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgta 52  Q
    |||||||||||||||||| |||||| || ||||||||| || ||||||||||    
T  42908051 ttttccccgatttcaaaatacgggtacgggacgggtaatggggatatatgta 42908102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45885775 - 45885878
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||    ||||| ||| ||| ||||||| |||||  ||||||||||| ||| || |||||||||    
T  45885775 ttttccccgatctcaaaacacgggtatgggacgggtaacaagtatataggtacccaccccgaacccataccaaaatccgtcccaaatgtaaaaaattact 45885874  T
Q  100 ttat 103  Q
    ||||    
T  45885875 ttat 45885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 8265714 - 8265672
Alignment:
Q  197 ttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||||||||||||||||| |||| |||||| |||||||    
T  8265714 ttctctcttatctccttccatatgtcacactctcgacctctct 8265672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10990871 - 10990929
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||||||||| |||||| || |||||||||  | |||||| ||||||||||    
T  10990871 ttttccccgatttcaaaatacgggtacgggacgggtaatagggatataggtatccaccc 10990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12980460 - 12980378
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtccc 82  Q
    |||||||||||||||||||||||||  | ||||||||| ||  ||||| ||| ||| ||||||| ||||| |||| |||||||    
T  12980460 ttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaacccgtccc 12980378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21750865 - 21750791
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaa 74  Q
    |||| ||||||||||||| |||| |  ||||||||| |||| |||||||||| ||||| ||||||||||| ||||    
T  21750865 tttttcccgatttcaaaatacggatatgagacgggtgacggggatatatgtacccacctcgaactcatacccaaa 21750791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 24903456 - 24903378
Alignment:
Q  44 atatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaata 122  Q
    ||||| ||| |||||| ||||||||| |||| || ||||| || ||||||| || ||| ||||| ||||||||||||||    
T  24903456 atataggtacccacccaaactcatacacaaacccatcccggatgtagaaaactattttgttaccccttttatataaata 24903378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27063221 - 27063127
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgta-tccacccgaactcatactcaaatccgtcccgaatatagaaaa 94  Q
    |||||| ||||||||||| |||||| |  ||||| |||||| |||||||||| ||  ||||||||||||| |||| ||  ||||||| |||||||    
T  27063221 ttttcctcgatttcaaaatacgggtacaggacggataacggggatatatgtactcaccccgaactcatacccaaaccctacccgaatgtagaaaa 27063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29292787 - 29292749
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaac 39  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  29292787 ttttccccgatttcaaaacacgggtacgagatgggtaac 29292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27063417 - 27063348
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatac 69  Q
    ||||||||||||| | || |||||| || ||||||||||||  ||||||||| ||| |||||||||||||    
T  27063417 ttttccccgatttaataatacgggtacgggacgggtaacgggaatatatgtacccaccccgaactcatac 27063348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27896485 - 27896582
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaatta 97  Q
    |||||||  ||||||||||| ||||  | |||||||||||| | |||||| | | |||| |||||||||| || | |||||||||||||| |||||||    
T  27896485 ttttcccttatttcaaaacatgggtatgggacgggtaacggggttatatgcaccaaccccgaactcatacccatacccgtcccgaatataaaaaatta 27896582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29157434 - 29157374
Alignment:
Q  1 ttttccccgatttcaaaaca--cgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||||||||| || |  |||||  |||||||||||||| |||||||||||||||||    
T  29157434 ttttccccgatttcataatatacgggtatgagacgggtaacggggatatatgtatccaccc 29157374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3226956 - 3227028
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactca 72  Q
    |||||||||||||||||||||||||  | |||||||||| |  ||||| ||| ||| ||||||| ||||||||    
T  3226956 ttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatactca 3227028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43507528 - 43507488
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacgg 41  Q
    |||||||||||||||||||| ||||  ||||||||||||||    
T  43507528 ttttccccgatttcaaaacatgggtatgagacgggtaacgg 43507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 44734374 - 44734470
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    ||||||||||||||||||  | ||| ||||| ||  ||||| ||| |||||| |||| ||||| || ||||||||| ||| || |||||||||||||    
T  44734374 cgatttcaaaacacgggtatgggaccggtaatgggtatataggtacccaccccgaacccatacacatatccgtcccaaatgtaaaaaattactttat 44734470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 27252546 - 27252407
Alignment:
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    |||||||||  |||||||||||||| ||  |||||| |||||||||| ||||||| ||| ||||| ||| |||||||||||||||||||||||| |||||    
T  27252546 tttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagttagagtatcagtctttcagatgacactcacttatcttagtt 27252447  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  27252446 ctctctt-tctccttccatatctcacactctcggcctctct 27252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 3385875 - 3386090
Alignment:
Q  10 atttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattactttattacct 108  Q
    |||||||||||||||| || ||| |||||||  |||||| ||| ||||| ||||  |||||  ||| |||| || ||| || ||||| | |||| || |     
T  3385875 atttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaacccgtacctaatgtaaaaaatcattttagtaacc 3385974  T
Q  109 cttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatc 208  Q
    ||||| ||||||||  |||  ||||| |||||||||| ||| ||||||| | ||||||  ||||| || |||||||| ||||||| ||||||||||||||    
T  3385975 cttttctataaataaaaatcgaaatcctaaatcatttcacttacatagttaaagtctcggtcttttagttgacactctcttatcaaagttctctcttatc 3386074  T
Q  209 tccttccatatctcac 224  Q
    ||||||||||||||||    
T  3386075 tccttccatatctcac 3386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 3414608 - 3414767
Alignment:
Q  65 catactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtc 164  Q
    |||||||||| |||| || ||| |||||||| | |||| |||| ||||| ||||||||  |||  ||| | |||||||||| ||||||||||||| ||||    
T  3414608 catactcaaacccgtacctaatgtagaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtcaaagtc 3414707  T
Q  165 tcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcac 224  Q
    ||  ||||| || |||||||| ||| ||| |||||| |||||||||||||||||||||||    
T  3414708 tcgttcttttagttgacactctcttctcaaagttctatcttatctccttccatatctcac 3414767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 191
Target Start/End: Original strand, 30904834 - 30905016
Alignment:
Q  9 gatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacc 107  Q
    ||||||||||||||||| || |||||||| ||| |||||| ||| |||||| |||| ||||| |||||||||| ||||| ||| |||| | |||| ||||    
T  30904834 gatttcaaaacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtaggaaatcaatttactacc 30904932  T
Q  108 tcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttat 191  Q
     ||||||||||||||| ||   ||| | | |||||||| ||||| |||||||||||   | ||||||| |||||||||||||||    
T  30904933 ccttttatataaatagaaacccaaacccttaatcatttcactcatatagtcagagttgtagtctttcatatgacactcacttat 30905016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 26207216 - 26207118
Alignment:
Q  149 tcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||| ||| |||||||| |||||| ||||||||||||||| |||||||||||  || |||||| ||||||||||| |||||||||||||| ||||||||    
T  26207216 tcacacagttagagtctccatcttttagatgacactcacttgtcatagttctcatttttctcctcccatatctcacactctcggcctctct-cttctcca 26207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 37032177 - 37032345
Alignment:
Q  69 ctcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaa 168  Q
    |||||| || ||| |||| |||||||||| |||||||||  |||||||||||||  ||   ||| | |||||||||| ||||| | | ||||||||||      
T  37032177 ctcaaacccatcctgaatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactcatacaatcagagtctcgg 37032276  T
Q  169 tctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||||||||  || ||||||||||||| |||| |||||||| ||||  ||| ||||| ||||||||    
T  37032277 tctttcagatgaca--caattatcatagttctttcttttctccttcaatattccacactctcagcctctct 37032345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 772861 - 773032
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatag 156  Q
    ||||||||||| | |||||  ||||| |||||||||||| | ||||||||| ||||| ||||||||| ||   ||| ||| |||||||| ||||||| |     
T  772861 cccgaactcatgcccaaatatgtcccaaatatagaaaatcaatttattacc-cttttgtataaatagaaactcaaaccttgaatcatttcactcacacaa 772959  T
Q  157 tcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctct 229  Q
    ||  |||||||  |||  ||||||||||| ||| ||||| ||||||||| ||||||| ||| |||||| ||||    
T  772960 tctaagtctcacacttctagatgacactcgcttgtcatatttctctcttttctcctttcatgtctcacactct 773032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 27937640 - 27937570
Alignment:
Q  169 tctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||| ||||||||||||||| |||||||| |||| |||| ||||||||||||| ||||||| ||||||    
T  27937640 tctttcaaatgacactcacttattatagttctttcttttctctttccatatctcacactctcggtctctct 27937570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43582655 - 43582553
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||||||||||||||||||  |||||||||||||   || || ||| |||||||||| |||| ||| | ||||||| ||| || ||||||||||    
T  43582655 ttttccccgatttcaaaacacgggtatgagacgggtaacgtgtatgtaggtacccacccgaacccatattcatacccgtcccaaatgtaaaaaattactt 43582556  T
Q  101 tat 103  Q
    |||    
T  43582555 tat 43582553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 34593098 - 34592995
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||| ||| | | || |||||  ||||||| || ||||||||||||||||||||| |  | |||||||||||||||||| |||||| |||    
T  34593098 taaatcatttcacttacacaattagggtctcggtctttcacataacactcacttatcatagttctattgtttctccttccatatctcacactctcgacct 34592999  T
Q  236 ctct 239  Q
    ||||    
T  34592998 ctct 34592995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44172704 - 44172601
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||||||||    
T  44172704 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 44172605  T
Q  100 ttat 103  Q
    ||||    
T  44172604 ttat 44172601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44179404 - 44179301
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||||||||    
T  44179404 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 44179305  T
Q  100 ttat 103  Q
    ||||    
T  44179304 ttat 44179301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 44953445 - 44953548
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| |||  ||||| ||||||||||||||| ||||||| ||| || |||| ||||    
T  44953445 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaacccgtcccaaatgtaaaaaactact 44953544  T
Q  100 ttat 103  Q
    ||||    
T  44953545 ttat 44953548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 49580142 - 49580039
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | |||||||||||   ||||| ||| ||||| ||||| |||||||||| ||||||| ||| || |||||||||    
T  49580142 ttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaacccgtcccaaatgtaaaaaattact 49580043  T
Q  100 ttat 103  Q
    ||||    
T  49580042 ttat 49580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 53631982 - 53631879
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||  |||| |||||||| ||  ||||||||||||||  ||||| ||| |||||| |||| ||||||||||  |||||||||| ||||||||||||    
T  53631982 ttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgtcccgaatctagaaaattact 53631883  T
Q  100 ttat 103  Q
    ||||    
T  53631882 ttat 53631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 40890271 - 40890203
Alignment:
Q  171 tttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||| |||||||||  |||||||||||||||||| ||||||||||| |||||| ||| || |||||||    
T  40890271 tttcatatgacactcgtttatcatagttctctcttttctccttccatctctcacactcccgacctctct 40890203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42243465 - 42243346
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||| ||||||||  |||| ||||||||  ||||||| |||||| ||| || |||||| |||| || |||  ||| |||||||| | |    
T  42243465 tttttcccgatttcaatacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaaaatcaat 42243366  T
Q  100 ttattacctcttttatataa 119  Q
    |||||||| |||||||||||    
T  42243365 ttattaccccttttatataa 42243346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 44106802 - 44106905
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| || | |||||||||||  | |||| |||||||| ||||| ||||| |||| |||| |||||||||| ||||||| ||| || |||||||||    
T  44106802 ttttccccaatcttaaaacacgggtatgggacgcgtaacggatatataggtatctaccccgaacccatactcaaacccgtcccaaatgtaaaaaattact 44106901  T
Q  100 ttat 103  Q
    ||||    
T  44106902 ttat 44106905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48390827 - 48390930
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||| ||| || |||| ||||| || | ||||||||||  || |||||||||    
T  48390827 ttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccatacccatacccgtcccgaacgtaaaaaattact 48390926  T
Q  100 ttat 103  Q
    ||||    
T  48390927 ttat 48390930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49025758 - 49025658
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||||||||| |||||||||||||  | |||||||||| |  ||||| |||  || |||||| ||||| |||| ||||||| ||| || ||||||||||    
T  49025758 ttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacacatccgaacccatacccaaacccgtcccaaatgtaaaaaattactt 49025659  T
Q  101 t 101  Q
    |    
T  49025658 t 49025658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4557315 - 4557418
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||| |||||||||| ||||  | |||||||||||   ||||| ||| |||||| |||| ||||| ||||||  ||||||||  |||||||||||    
T  4557315 ttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaatctatcccgaatgcagaaaattact 4557414  T
Q  100 ttat 103  Q
    ||||    
T  4557415 ttat 4557418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34026032 - 34025929
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||| |||  | |||||||||||   ||||| || |||| ||||||||||||| || | ||||||| ||| || ||||||| |    
T  34026032 ttttccccgatttcaaaacacaggtatgggacgggtaacgagtatataggtttccaccccgaactcatacccatacccgtcccaaatgtaaaaaattatt 34025933  T
Q  100 ttat 103  Q
    ||||    
T  34025932 ttat 34025929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35687501 - 35687552
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgta 52  Q
    ||||||||||||||| || |||||| ||||||||||||| | ||||||||||    
T  35687501 ttttccccgatttcataatacgggtacgagacgggtaactgtgatatatgta 35687552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 42758448 - 42758349
Alignment:
Q  5 ccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    ||||||||||||||||| |||  | |||||||||| |  ||||| |||| ||||| |||| ||||| |||| ||||||||||   |||||||||||||||    
T  42758448 ccccgatttcaaaacacaggtatgggacgggtaacaggtatataggtatgcaccccgaacccatacccaaacccgtcccgaacgaagaaaattactttat 42758349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10043292 - 10043393
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||| | |||||||||| ||||  | |||||||||||| | |||||| | |||||| |||| ||||| || | || ||||||||||| |||||||||    
T  10043292 ttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccatacccatacccatcccgaatataaaaaattact 10043391  T
Q  100 tt 101  Q
    ||    
T  10043392 tt 10043393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34119734 - 34119633
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||| |||||||||||  ||||||| |||| |  ||||| ||| |||||| |||| ||||| |||||||||||| |||  |||||| ||||    
T  34119734 tttttcccgattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgcagaaaactact 34119635  T
Q  100 tt 101  Q
    ||    
T  34119634 tt 34119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23546952 - 23547056
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| || ||||||||||  | ||||||||||||  ||||| ||| ||| ||||||| ||||| ||||  |||||| ||| || |||| ||||    
T  23546952 ttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaactact 23547051  T
Q  100 ttatt 104  Q
    |||||    
T  23547052 ttatt 23547056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 35248395 - 35248638
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||| ||||| ||||||||||||  | ||||||||| || |||| | ||| |||||| |||| ||||| |||| |||||| |||| ||||||| ||      
T  35248395 ttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtagaaaaata-- 35248492  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
     ||| ||| ||||||||||||||| ||   ||| | |||||||||| ||||||| || |||||||||| ||||||| ||||||||| ||||| |||||||    
T  35248493 -tat-accccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgcttattatagttc 35248590  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||||||||||||||||||||||| || | ||||||||| ||||||||    
T  35248591 tctcttatctccttccatatctcacacttttggcctctct-cttctcca 35248638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 35965413 - 35965166
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | || | |||| || |||| ||||| |||| |||||| ||||| |||| ||||||||||| |||||||| | |    
T  35965413 ttttccccgatttcaaaacacgggtatg-gatgtgtaatggggatacatgtacccactccgaacccatacccaaacccgtcccgaatgtagaaaatcaat 35965315  T
Q  100 ttattacctcttttata-taaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    ||||| || |||||||| ||||||| |||  ||  | |||||||||| ||||| | ||| ||  ||||| | |||||||| ||| |||||||||||||||    
T  35965314 ttattgccccttttatactaaataggaattgaatccataaatcatttcactcatacagtgaggatctcagtttttcagataacattcacttatcatagtt 35965215  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||| ||||||||||||||||||||| |||||| | ||||| ||||||||    
T  35965214 ctcttttatctccttccatatctcacactctcgtcatctct-cttctcca 35965166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 248
Target Start/End: Original strand, 29656802 - 29656993
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatag 156  Q
    ||||||||||||| |||||| ||| | ||| || ||||| | ||||||| | ||||||||||||||  ||  | || | |||||||||| ||||||| ||    
T  29656802 cccgaactcatacacaaatctgtctcaaatgtataaaatcaatttattatcccttttatataaataaaaaccataaccctaaatcatttgactcacacag 29656901  T
Q  157 tcagagtctcaatctttcagatgacactcactt-atcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||| ||||||| |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  29656902 tcaaagtctcagtctttcagatgacactgactttatcataattctctcttatctccttacatatctcacattctcggcctctct-cttctcca 29656993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 34214726 - 34214905
Alignment:
Q  59 cgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtc 158  Q
    |||||||||||||||| ||||||   || |||||| | | |||||| ||   ||||||||||||| ||   || ||| ||||||||| ||| ||| ||||    
T  34214726 cgaactcatactcaaacccgtcctagatgtagaaagtcaatttattgccctgtttatataaatagaaactcaactct-aaatcatttcactaacacagtc 34214824  T
Q  159 agagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||| || |||||||||||    
T  34214825 agagtctcagtctttcacatgacactcacttatcatagttcgctcttttctccttcgatatctcacactttcggcctctct 34214905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 30696995 - 30696764
Alignment:
Q  9 gatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacc 107  Q
    ||||| |||||| || | ||||||||||||| |||||||||||| |||||| |||||||||| |||| |  |||| ||| || ||||| | |||||||||    
T  30696995 gattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaaaatcaatttattacc 30696896  T
Q  108 tcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttat 207  Q
      |||||||||||||| |||  ||| | |||||||| | ||||||| ||| ||||||||  ||||||| |||||| || |||| ||||||||||| || |    
T  30696895 cattttatataaatagaaattcaaaccctaaatcatgtcactcacacagttagagtctcggtctttcatatgacattctcttaccatagttctctatttt 30696796  T
Q  208 ctccttccatatctcacgctctcggcctctct 239  Q
    |||||  | |||||||| |||||  |||||||    
T  30696795 ctcctctcgtatctcacactctcaacctctct 30696764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 25210456 - 25210217
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaa-ctcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||| || |||||||||||  | |||||||||||  |||||||||| |||||| || | |||||  ||| || |||||||| |||||||| | |    
T  25210456 tttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgtagaaaatcaat 25210357  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    || |||||  |||||||||||||| ||   ||| | |||||||||| ||||||| |||| ||||||||   ||| ||||| ||||||||||||||||||     
T  25210356 ttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcacttatcatagtta 25210257  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctct 239  Q
    |||||| || |||| |||  ||||| ||||||| ||||||    
T  25210256 tctcttttcacctttcatggctcacactctcggactctct 25210217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 34544320 - 34544569
Alignment:
Q  1 ttttccccgatttcaaaa-cacgggtgcgagacgggtaacggagatatatgtatccacccgaa-ctcatactcaaatccgtcccgaatatagaaaattac 98  Q
    |||||||||||||||||| ||||| | ||||| | ||||| ||||||||  || |||| | || |||||||||||| || |||||||| ||||||||       
T  34544320 ttttccccgatttcaaaaacacggatacgagatgtgtaacagagatatagatacccacacaaaactcatactcaaacccctcccgaatgtagaaaatcta 34544419  T
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    |||||||||  |||||||||||||  ||   ||| | ||||| |||| | ||||| |   ||| ||||  ||||| |||||||| |||||| ||||||||    
T  34544420 tttattacccattttatataaataaaaactcaaaccctaaataatttcattcacacaacgagactctcgttcttttagatgacaatcacttctcatagtt 34544519  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||||  ||||||||||||||||| ||||| | ||||||  |||||||    
T  34544520 ctctctttactccttccatatctcacactctcagtctctctttttctcca 34544569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 40734609 - 40734829
Alignment:
Q  16 aaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctctttta 114  Q
    ||||||||||  |||||||||||| |||||||||| ||||| ||||||||||||   ||| | | |  ||||  ||||||||| |||| ||||||||  |    
T  40734609 aaacacgggtatgagacgggtaacagagatatatgaatccatcccgaactcatatctaaacctgccttgaatgcagaaaattaatttactacctctta-a 40734707  T
Q  115 tataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttc 214  Q
    ||||||||  ||  |||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||  ||||  |||||||||| | | || |||||||     
T  40734708 tataaataaaaaccaaaaccctaaatcatttcactcacacagtcagagtctcagtctttcaaatgattctcatatatcatagttttattttgtctcctta 40734807  T
Q  215 catatctcacgctctcggcctc 236  Q
    |||||||||| ||||| |||||    
T  40734808 catatctcacactctcagcctc 40734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 13954759 - 13954611
Alignment:
Q  65 catactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtc 164  Q
    |||||||||| ||||| ||||  |||||||| |  |||||||| ||||||||||||||| ||    || | |||||||||| ||||||   || ||||||    
T  13954759 catactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtc 13954660  T
Q  165 tcaatctttcagatgacactcacttatcatagttctctcttatctcctt 213  Q
    |||  |||||||||||||||||||||| ||||||||||||| |||||||    
T  13954659 tcagactttcagatgacactcacttatgatagttctctcttttctcctt 13954611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 14095966 - 14095818
Alignment:
Q  65 catactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtc 164  Q
    |||||||||| ||||| ||||  |||||||| |  |||||||| ||||||||||||||| ||    || | |||||||||| ||||||   || ||||||    
T  14095966 catactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtc 14095867  T
Q  165 tcaatctttcagatgacactcacttatcatagttctctcttatctcctt 213  Q
    |||  |||||||||||||||||||||| ||||||||||||| |||||||    
T  14095866 tcagactttcagatgacactcacttatgatagttctctcttttctcctt 14095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 31600914 - 31601017
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||||| | ||| ||||||| | ||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| || | |||||    
T  31600914 taaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcatagttctctcttctatccttccatatctcacactattggcct 31601013  T
Q  236 ctct 239  Q
    ||||    
T  31601014 ctct 31601017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 35409304 - 35409409
Alignment:
Q  142 attttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgc 241  Q
    |||| ||| ||| ||||||||||||| |||| || |||||||||||||||||||||||  |||| ||| | |||||||||||| |||||||||||||| |    
T  35409304 atttcacttacacagtcagagtctcagtcttacatatgacactcacttatcatagttcattcttttcttcgtccatatctcacactctcggcctctct-c 35409402  T
Q  242 ttctcca 248  Q
    |||||||    
T  35409403 ttctcca 35409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37999562 - 37999459
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  ||||||||||||||  ||||| ||| ||| ||||||||||||| |||| ||||||| ||| || |||||||||    
T  37999562 ttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacccgtcccaaatgtaaaaaattact 37999463  T
Q  100 ttat 103  Q
    ||||    
T  37999462 ttat 37999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14540860 - 14540757
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  ||||| ||||||||  ||||| | | |||| | |||  |||||||||||||||||||||  ||||||||||||    
T  14540860 ttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggcacccactcggaatccatactcaaatccgtcccgaacgtagaaaattact 14540761  T
Q  100 ttat 103  Q
    ||||    
T  14540760 ttat 14540757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35510453 - 35510556
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||| |||||||||||| | | | |||||||||| |  |||||| ||||||||| |||| ||||||||||||||||||||||| ||| | |||||     
T  35510453 ttttccccaatttcaaaacacagatacaagacgggtaatgaggatataggtatccacctcgaattcatactcaaatccgtcccgaatgtaggatattacc 35510552  T
Q  100 ttat 103  Q
    ||||    
T  35510553 ttat 35510556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43371632 - 43371539
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||||||||| |||| |||||| || |||||||||||| |||||||||| ||| ||| ||||||||| |||| ||  ||||||| ||||||    
T  43371632 ttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaaccctacccgaatgtagaaa 43371539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 3547239 - 3547187
Alignment:
Q  7 ccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||| |||||| || ||||||||||||||||||||||| ||||||    
T  3547239 ccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccc 3547187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 45256902 - 45256798
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  ||||||| ||| ||  ||||| ||| ||| ||||||| |||||  ||| ||||||| ||| || |||||||||    
T  45256902 ttttccccgatttcaaaacacgggtatgagacggttaatgggtatataagtacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattact 45256803  T
Q  100 ttatt 104  Q
    |||||    
T  45256802 ttatt 45256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13705371 - 13705474
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  ||||| ||||||||  ||||| ||| ||| ||||||| |||||  ||| ||||||| ||| |  |||||||||    
T  13705371 ttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaacccgtcccaaatgtgaaaaattact 13705470  T
Q  100 ttat 103  Q
    ||||    
T  13705471 ttat 13705474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 44746119 - 44746222
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||||||||||||  |  | ||||||||| ||  ||||||||| ||||  | |||||||||||||| ||||||| ||| |||||||| |||    
T  44746119 ttttccccgatttcaaaacacgaatatgggacgggtaatgggtatatatgtacccacttcaaactcatactcaaacccgtcccaaatgtagaaaatcact 44746218  T
Q  100 ttat 103  Q
    ||||    
T  44746219 ttat 44746222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 40359324 - 40359215
Alignment:
Q  99 tttattacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagt 197  Q
    |||||||| |||||||||||||||| || | ||| ||| ||||||||| | ||||  ||| ||||||||||||| ||| ||||||||||||| | | |||    
T  40359324 tttattacatcttttatataaatagaaactcaaagtct-aaatcatttcagtcacgcagttagagtctcaatctctcatatgacactcactttttagagt 40359226  T
Q  198 tctctcttatc 208  Q
    ||||| |||||    
T  40359225 tctcttttatc 40359215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 4961520 - 4961577
Alignment:
Q  59 cgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttata 116  Q
    ||||| ||||| ||||  ||||||||||||||||||| | ||||||||||||||||||    
T  4961520 cgaacccatacccaaactcgtcccgaatatagaaaatgaatttattacctcttttata 4961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38342529 - 38342622
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||||||||| |||| |||| | || |||||||||||| |||||||||| ||| ||||||| ||||| |||| ||  ||||||| ||||||    
T  38342529 ttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctacccgaatgtagaaa 38342622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9632465 - 9632362
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| || ||||||||||  | ||||||||| ||  ||||| ||||||| ||||||| ||||| |||| ||||||| ||| || |||| ||||    
T  9632465 ttttccccgatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 9632366  T
Q  100 ttat 103  Q
    ||||    
T  9632365 ttat 9632362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24414142 - 24414245
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | |||||||||| |  ||||| ||| ||| ||||||| ||||| |||| ||||||| ||| || |||| ||||    
T  24414142 ttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 24414241  T
Q  100 ttat 103  Q
    ||||    
T  24414242 ttat 24414245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 10920687 - 10920621
Alignment:
Q  38 acggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    ||||| ||||| |||||||||| |||| ||||| |||||||||||| ||| || |||||||||||||    
T  10920687 acggatatataggtatccaccccgaacccatacccaaatccgtcccaaatgtaaaaaattactttat 10920621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6164483 - 6164552
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatac 69  Q
    |||||||| |||||||||   |||| || |||||||||||| |||||||||| ||| |||||||||||||    
T  6164483 ttttccccaatttcaaaatttgggtacgggacgggtaacggtgatatatgtacccaccccgaactcatac 6164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 19104885 - 19104954
Alignment:
Q  35 gtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||||||  ||||| ||||||||| ||||  |||||||||| |||||||||||  |||||||||||||||    
T  19104885 gtaacgggtatataggtatccacctcgaatccatactcaaacccgtcccgaatgcagaaaattactttat 19104954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37106771 - 37106702
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccac-ccgaactcatac 69  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||| ||| |||| |||||| |||||    
T  37106771 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccatac 37106702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 8915954 - 8916050
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactttat 103  Q
    |||| |||||||||||||  | |||||||||| |  ||||| ||| ||| ||||||| |||||||||| ||||||| ||| || ||||||| |||||    
T  8915954 cgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaattattttat 8916050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10212485 - 10212386
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    |||||||||||||| |||||||| | || ||| |||||||| | ||| |||  |||||| ||| ||||| |  | |||||||||||||| ||||||||||    
T  10212485 ttttccccgatttccaaacacggttacgggacaggtaacggggttatgtgtgaccaccccaacccatacccttacccgtcccgaatata-aaaattactt 10212387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37472769 - 37472809
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacgg 41  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  37472769 ttttccccgatttcaaaacacgggtatgggacgggtaacgg 37472809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 39219337 - 39219107
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||||| ||||||||||| ||  ||  ||||||| |||| ||||| |||||| |||| ||||| ||||  ||| |  ||| |||||||||| |    
T  39219337 ttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaactcgttctaaatgtagaaaattaat 39219238  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||||||||||||||||||||||| ||   ||| | ||||||||||  |||||| ||||| ||||||| | ||||| ||||||||||||||||||||||     
T  39219237 ttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctcacacagtcacagtctcattttttcatatgacactcacttatcatagtta 39219138  T
Q  200 tctcttatctccttccatatctcacgctctc 230  Q
    |||| | ||||||| |||||| ||| |||||    
T  39219137 tctcctttctcctttcatatcgcacactctc 39219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 42728954 - 42729201
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||| |||| | ||||| || | || |||||  ||| | |||| |||||||||| ||||  ||| | |||| |||||||| | |    
T  42728954 tttttcccgatttcaaaacatgggtacaagacgagtgatggggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaat 42729053  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    |||| | | ||||||||||||||| ||   | |   |||||||||| ||||||| ||||||||||||| |||||||||| |||| |||||||||||||||    
T  42729054 ttatcatcccttttatataaatagaaacttatacactaaatcatttcactcacacagtcagagtctcagtctttcagataacacccacttatcatagttc 42729153  T
Q  200 tctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||| ||||||||||||| |||| ||||||| |||||| ||||||||    
T  42729154 tctcttgtctccttccatatatcacactctcggtctctct-cttctcca 42729201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 13692624 - 13692484
Alignment:
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    ||||||| | ||||||||||||||| ||  |||| | |||||||||| || |||| | | ||||||| | ||||||||| ||||||||||||| ||||||    
T  13692624 tttattatcccttttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgacactcacttattatagtt 13692525  T
Q  199 ctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  13692524 ctctcttttctccttccatatctcacactctcggcctctct 13692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 41476991 - 41477209
Alignment:
Q  30 gacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatg 128  Q
    ||||| |||||  |||||||||| |||||| |||  ||||| |||| ||||||||||   ||||||| | ||| |||||  ||||||||||| || ||||    
T  41476991 gacggataacgtggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaatcaatttgttaccctttttatataaagagaaatg 41477090  T
Q  129 aaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctc 228  Q
     ||| | ||||| |||| | ||||| ||||| ||||||  ||||||||||||||| ||||||||||| |||||| ||||| |||| ||||| |||| |||    
T  41477091 gaaaccctaaattatttcattcacacagtcaaagtctccgtctttcagatgacacccacttatcataattctcttttatcccctttcatatttcacactc 41477190  T
Q  229 tcggcctctctgcttctcca 248  Q
    ||||||||||| ||||||||    
T  41477191 tcggcctctct-cttctcca 41477209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 36421788 - 36421623
Alignment:
Q  57 cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaa-tgaaaatcttaaatcattttactcacata 155  Q
    |||||||| |||| ||||  |||| |||||||||||||| | ||||||| | || |||||||||||  || |  || ||| ||||||||| | ||||| |    
T  36421788 cccgaacttatacccaaactcgtctcgaatatagaaaatcaatttattatccctcttatataaataaaaactcgaactct-aaatcatttcattcacaca 36421690  T
Q  156 gtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctc 222  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||    
T  36421689 gtcagagtctcaatctttcagatggcaatcacttatcatagttctctcttttctcctttcatatctc 36421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 8880428 - 8880303
Alignment:
Q  99 tttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagtt 198  Q
    ||||||||| ||||| ||||||||| ||   |||  ||||||||||| ||||||| ||| |||||| || |||||||| ||||||| | |||||||| ||    
T  8880428 tttattaccccttttttataaatagaaactcaaactttaaatcatttcactcacaaagttagagtcgcagtctttcagttgacacttatttatcataatt 8880329  T
Q  199 ctctcttatctccttccatatctcac 224  Q
    ||||||| ||||||||||||||||||    
T  8880328 ctctcttttctccttccatatctcac 8880303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 239
Target Start/End: Complemental strand, 25181235 - 25181043
Alignment:
Q  49 tgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttatataaatagtaatgaaaa-tcttaaatcatttt 146  Q
    ||||||||||| |||||||||||||||  |||||| | | || ||| | | |||| || | ||| ||||||||||| ||   ||| |||||||| ||||     
T  25181235 tgtatccaccctgaactcatactcaaactcgtcccaattgtaaaaagtcaatttactatcccttctatataaatagaaacctaaactcttaaataatttc 25181136  T
Q  147 actcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||||| |||||||   |||||||||||| |||||||||| | | |||| |||| |||||||||||||||||| ||| ||||||||||    
T  25181135 actcacatagttagagtctttgtctttcagatgatactcacttattacaattctttcttttctccttccatatctcacactcccggcctctct 25181043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 25154837 - 25155074
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||| || || |||| |||| || |||||| ||| ||||  ||||||||| | |||| |||||| |||| |||||||| | |    
T  25154837 tttttcccgatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaat 25154936  T
Q  100 ttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttc 199  Q
    | | |||| |||||||  |||  | |||  ||| ||||||| |||| |||  ||  || ||||||||  || || |||||||||||||||||||||||||    
T  25154937 tcactaccccttttattcaaagggaaatccaaaccttaaattatttcactatcactgtgagagtctcggtcatttagatgacactcacttatcatagttc 25155036  T
Q  200 tctcttatctccttccatatctcacgctctcggcctct 237  Q
    ||| || ||||||| || ||||||| ||||||| ||||    
T  25155037 tcttttttctcctttcaaatctcacactctcggtctct 25155074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 45460190 - 45460293
Alignment:
Q  136 taaatcattttactcacatagtcagagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcct 235  Q
    |||||||||| ||||||| | ||  ||| |||||||||||||||||||||||||||| || || |||||| |||||||   |||||||| |||||| |||    
T  45460190 taaatcatttcactcacacaatcgcagtttcaatctttcagatgacactcacttatcgtaattttctcttttctccttatgtatctcacactctcgacct 45460289  T
Q  236 ctct 239  Q
    ||||    
T  45460290 ctct 45460293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 48125701 - 48125816
Alignment:
Q  9 gatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattactttattacc 107  Q
    ||||| ||||||||||| || |||||||||||  |||||| ||||||| ||||||| ||||| ||||  |||| ||||| |||||||| | |||| ||||    
T  48125701 gattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactcgtcgcgaatgtagaaaatcaatttactacc 48125800  T
Q  108 tcttttatataaatag 123  Q
     |||||||||||||||    
T  48125801 gcttttatataaatag 48125816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 11198389 - 11198294
Alignment:
Q  135 ttaaatcattttactcacatagtc--agagtctcaatctttcagatgacactcacttatcatagttctctcttatctccttccatatctcacgctct 229  Q
    ||||||||||||||||||||| ||  ||||||| | ||||| | |||||||| |||||  ||||||||||||| ||||||| |||||||||||||||    
T  11198389 ttaaatcattttactcacataatcagagagtcttagtcttttatatgacacttacttagtatagttctctctt-tctcctttcatatctcacgctct 11198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 14903031 - 14902972
Alignment:
Q  188 ttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||    
T  14903031 ttatcatagttctctcttttctccttccatatctcacaatctcggcctctct-cttctcca 14902972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 16903422 - 16903369
Alignment:
Q  178 tgacactcacttatcatagttctctcttatctccttccatatctcacgctctcg 231  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  16903422 tgacaatcacttatcatagttctctcttttctccttccatatttcacactctcg 16903369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35069899 - 35069992
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||||||||||| || |||||| | ||||||||||| | |||||||||| ||| ||||||| |||||||||| ||  ||||||| ||||||    
T  35069899 ttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaaccctacccgaatgtagaaa 35069992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13798317 - 13798198
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||||||  |||| ||||||||  ||||||| |||||| ||| || ||||||  ||| || |||  ||| |||||||| | |    
T  13798317 tttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaaaatcaat 13798218  T
Q  100 ttattacctcttttatataa 119  Q
    |||||||| |||||||||||    
T  13798217 ttattaccccttttatataa 13798198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29871295 - 29871398
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||| |||||||||||||| ||||  | ||| |||||| |  ||||| ||| |||||| |||||||||| |||| ||||||||||| |||||||||| |    
T  29871295 ttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaaaattatt 29871394  T
Q  100 ttat 103  Q
    ||||    
T  29871395 ttat 29871398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29936495 - 29936392
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||| ||||||  | ||||||||||||  ||||| ||| |||||| |||| ||||| |||| ||||||| ||| || |||||||||    
T  29936495 ttttccccgatctcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattact 29936396  T
Q  100 ttat 103  Q
    ||||    
T  29936395 ttat 29936392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49250783 - 49250886
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||| ||  ||||| ||||||||| ||||| ||||| |||| ||||||| ||| || |||| ||||    
T  49250783 ttttccccgatctcaaaacacgggtatgggacgggtaatgggtatataggtatccacctcgaacccatacccaaacccgtcccaaatgtaaaaaactact 49250882  T
Q  100 ttat 103  Q
    ||||    
T  49250883 ttat 49250886  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12718782 - 12718840
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||||||||||||| || ||| || |||||||||||||||| ||||||||| ||||||    
T  12718782 ttttccccgatttcataatacgtgtacgagacgggtaacggaaatatatgtacccaccc 12718840  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 14891063 - 14890994
Alignment:
Q  178 tgacactcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
    ||||||| | |||| ||||||||||||| ||||||||||||||||||  ||||| ||||||| ||||||||    
T  14891063 tgacacttatttataatagttctctcttttctccttccatatctcacaatctcgacctctct-cttctcca 14890994  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23058545 - 23058452
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||| ||||||||||||  || || ||||||||||||||| |||||| ||| ||| ||||||| ||||| |||| ||  ||||||||||||||    
T  23058545 ttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacccaaaccctacccgaatatagaaa 23058452  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17135026 - 17134986
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacgg 41  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  17135026 ttttccccgatttcaaaacacgggtatgagacgggtaacgg 17134986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 5290408 - 5290489
Alignment:
Q  100 ttattacctcttttatataaatagtaa-tgaaaatct---taaatcattttactcacatagtcagagtctcaatctttcaga 177  Q
    |||||| ||||||||||||||||| || | ||| |||   |||||||||| ||||||||||||| ||||||| |||||||||    
T  5290408 ttattatctcttttatataaatagaaacttaaattctaattaaatcatttaactcacatagtcaaagtctcagtctttcaga 5290489  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16433177 - 16433277
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactt 100  Q
    ||||| |||||||||||||||||||  | ||||||||||||| ||||| |||  | ||||||| ||||| |||| ||  ||| |||  ||||||||||||    
T  16433177 ttttctccgatttcaaaacacgggtatgggacgggtaacggatatataggta--cccccgaacccatacccaaacccaccccaaatgcagaaaattactt 16433274  T
Q  101 tat 103  Q
    |||    
T  16433275 tat 16433277  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19572522 - 19572625
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| ||||||||||||||||||||  | ||| ||||||||  ||||| ||| ||| ||||||| |||||||| | ||||||| ||| || ||||||| |    
T  19572522 tttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaattatt 19572621  T
Q  100 ttat 103  Q
    ||||    
T  19572622 ttat 19572625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24236771 - 24236874
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  |  ||||| |||||  ||||| ||| ||| ||||||| |||||||||| ||||||| ||| || ||||||| |    
T  24236771 ttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaattatt 24236870  T
Q  100 ttat 103  Q
    ||||    
T  24236871 ttat 24236874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36187230 - 36187333
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    ||||||||||| |||||||||||||  | ||||||||||||  ||||| ||| |||||| |||| ||||| |||| ||||||| ||| || ||| ||| |    
T  36187230 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgtaaaaagttatt 36187329  T
Q  100 ttat 103  Q
    ||||    
T  36187330 ttat 36187333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19003676 - 19003734
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    |||||||||||| ||||| ||||||  | ||||| |||||| |||||||||||||||||    
T  19003676 ttttccccgattacaaaatacgggtatgggacggataacggggatatatgtatccaccc 19003734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 39582408 - 39582334
Alignment:
Q  41 gagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaattactttattacctcttttat 115  Q
    |||||| ||||| ||||| ||||||||||||||| ||||| | ||| ||||||| || ||| ||||| |||||||    
T  39582408 gagatacatgtacccacctgaactcatactcaaacccgtctcaaatgtagaaaactaatttcttaccccttttat 39582334  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3627995 - 3628035
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacgg 41  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  3627995 ttttccccgatttcaaaacacgggtatgggacgggtaacgg 3628035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9681790 - 9681886
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatactcaaatccgtcccgaatatagaaaatta 97  Q
    ||||| |||||||||||||| |||| || || || ||| |  ||||||||||  ||||||||| ||||  ||||||| || ||||| ||||||||||    
T  9681790 ttttctccgatttcaaaacaagggtacgtgatggataatgatgatatatgtactcacccgaacccatatccaaatccatctcgaatgtagaaaatta 9681886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 10450070 - 10450162
Alignment:
Q  2 tttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaa 93  Q
    ||||||| |||| |||| |||||| || | |||||||| | |||||||||| |||||| |||||||||| |||| ||  ||||||| ||||||    
T  10450070 tttccccaattttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaaccctacccgaatgtagaaa 10450162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10778577 - 10778649
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactca 72  Q
    |||| ||||||||||||||||||||  | |||||||||||| | ||||  |||||| ||||||| ||||||||    
T  10778577 tttttcccgatttcaaaacacgggtatgggacgggtaacggggttatagatatccaccccgaacccatactca 10778649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42707847 - 42707915
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacccgaactcatac 69  Q
    ||||| |||||||||||||||||||  | ||||||||||||  ||||| |||  ||||||||| |||||    
T  42707847 ttttctccgatttcaaaacacgggtatgggacgggtaacgggaatataagtactcacccgaacccatac 42707915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 48125847 - 48125887
Alignment:
Q  165 tcaatctttcagatgacactcacttatcatagttctctctt 205  Q
    ||| |||||||||||||| |||||| |||||||||||||||    
T  48125847 tcagtctttcagatgacattcacttgtcatagttctctctt 48125887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 248
Target Start/End: Complemental strand, 1106 - 943
Alignment:
Q  83 gaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgaca 182  Q
    |||| |||||||||| |||||||||  |||||||||||||| ||   |||||||||||||||| |||||| | |||| ||||||| ||||| ||||||||    
T  1106 gaatgtagaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactcacgtggtcaaagtctcattctttaagatgaca 1007  T
Q  183 ctcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctctgcttctcca 248  Q
     |||||||||||| |||||| || ||||||| |||||||||| |||||  ||||||| ||||||||    
T  1006 atcacttatcataattctct-ttttctcctttcatatctcacactctcctcctctct-cttctcca 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 4673 - 4829
Alignment:
Q  83 gaatatagaaaattactttattacctcttttatataaatagtaatgaaaatcttaaatcattttactcacatagtcagagtctcaatctttcagatgaca 182  Q
    |||| |||||||| |  |||| ||| ||||||||||||||| ||| ||||   |||||||||| ||||||| |||||||||| |  ||||| |||| |||    
T  4673 gaatgtagaaaatcaaattataaccccttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataaca 4772  T
Q  183 ctcacttatcatagttctctcttatctccttccatatctcacgctctcggcctctct 239  Q
    ||||||||||||||||||||||| | ||||||||||| |||| || |||| ||||||    
T  4773 ctcacttatcatagttctctcttttttccttccatatttcacactatcggtctctct 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33471 - 33368
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  | ||||||||||||  ||||||||| ||| ||||||| ||||| ||||  ||||||||||  |||||| ||||    
T  33471 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgtcccgaatgcagaaaactact 33372  T
Q  100 ttat 103  Q
    ||||    
T  33371 ttat 33368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 211442 - 211384
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc 59  Q
    ||||| |||||||||||| |||||| ||||||||||||| | |||||||||| ||||||    
T  211442 ttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccc 211384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20749 - 20854
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccacc-cgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||| |||||||||||||| || ||  ||||||||||| || ||||||  |||||||| ||||| |||||||||| |||| |||||| || ||||| | |    
T  20749 tttttcccgatttcaaaactcgagtatgagacgggtaatggggatataaatatccacctcgaacccatactcaaacccgttccgaatgtaaaaaatcaat 20848  T
Q  100 ttatta 105  Q
    ||||||    
T  20849 ttatta 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3047 - 2954
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcca-cccgaactcatactcaaatccgtcccgaatatagaaa 93  Q
    |||||||||||||||||| |||||| |  ||||| |||| | |||||||||| ||| ||||||| |||||||||| ||  ||||||| ||||||    
T  3047 ttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaaccctacccgaatgtagaaa 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 107408 - 107508
Alignment:
Q  8 cgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatccaccc-gaactcatactcaaatccgtcccgaatatagaaaattactttattac 106  Q
    |||||||||||||| |||  | |||||||| |  ||||||| ||| |||||| ||||||||| |||||  ||| |||||| | |||||||||||||||||    
T  107408 cgatttcaaaacacaggtatgggacgggtagcatagatataagtacccaccccgaactcatattcaaactcgttccgaatgttgaaaattactttattac 107507  T
Q  107 c 107  Q
    |    
T  107508 c 107508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 90675 - 90572
Alignment:
Q  1 ttttccccgatttcaaaacacgggtgcgagacgggtaacggagatatatgtatcc-acccgaactcatactcaaatccgtcccgaatatagaaaattact 99  Q
    |||||||||||||||||||||||||  ||||||| ||||||  ||||  ||| ||  ||||||| ||||| ||||| ||||| ||||  ||||||||| |    
T  90675 ttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaaattcgtcctgaatgcagaaaattatt 90576  T
Q  100 ttat 103  Q
    ||||    
T  90575 ttat 90572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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