View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9130_low_25 (Length: 262)
Name: NF9130_low_25
Description: NF9130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9130_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 247
Target Start/End: Original strand, 1719224 - 1719421
Alignment:
| Q |
50 |
ttacttgctcaattctacggtgaaaaatacgtttcaagatcccattgaggtgtttgcttcggtgaaccattccaatttcctcttgcaatttttctagcaa |
149 |
Q |
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| T |
1719224 |
ttacttgctcaattctacggtgaaaaatacgtttcaagatcccattgaagtgtttgcttcggtgaaccattccaatttcctcttgcaatttttctagcaa |
1719323 |
T |
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| Q |
150 |
accgacatatgtaattccagaatgttctcggattatttttgttaaaagataggtcataacaccgttcatctcttttcctccaaaagcctgcacaggtt |
247 |
Q |
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| T |
1719324 |
accgacatatgtaattccagaatgttctcggattatttttgttaaaagataggtcataacaccgttcatctcttttcctccaaaagcctgcacaggtt |
1719421 |
T |
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