View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9130_low_32 (Length: 213)
Name: NF9130_low_32
Description: NF9130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9130_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 44218041 - 44218226
Alignment:
| Q |
15 |
gagcagagagtacaacccattcccctattccaatattagcatat-----accggttccttccttcatccaataagttgatcaagaacgtgaatactttaa |
109 |
Q |
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| T |
44218041 |
gagcagagagtacaacccattcccctattccaatattagcatatcatgcaccggttccttccttcatccaataagttgatcaagaacgtgaatactttaa |
44218140 |
T |
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| Q |
110 |
tttcgcataaaaacaccatgctgcatatgtattggtttttaattagttttaacagttttagtaatatttagcaccatgtatttttt |
195 |
Q |
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| T |
44218141 |
tttcgcataaaaacaccatgctgcatatgtattggtttttaatttgttttaacagttttagtaatatttagcaccatgtttttttt |
44218226 |
T |
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