View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9131_low_6 (Length: 336)
Name: NF9131_low_6
Description: NF9131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9131_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 13 - 319
Target Start/End: Complemental strand, 37303192 - 37302886
Alignment:
| Q |
13 |
tttggtgttgaaggtatggagataagtgcacgtttgacgatcgtagacgttgatttgattttccgtagctgcgtagaggaggttgttgtggagggcaagc |
112 |
Q |
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| T |
37303192 |
tttggtgttgaaggtatggagataagtgcacgtttgacgatcgtagacgttgatttgattttccgtagctgcgtagaggaggttgttgtggagggcaagc |
37303093 |
T |
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| Q |
113 |
gatgtgatagggcgggaagagtggggtgtgagagaggtgatgcagtggtaggagacggagaagttgttgaggttttgagaagagagtttttggagagatg |
212 |
Q |
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| T |
37303092 |
gatgtgatagggcgggaagagtggggtgtgagagaggtgatgcagtggtaggagacggagaagttgttgaggttttgagaagagagtttttggagagatg |
37302993 |
T |
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| Q |
213 |
gaactgatggaagtgtttgtattgagtagttgctataaagagttgaggtgctgtcgtcggaggttagggttgaagaagaagaagtgcttgagtctgatgc |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37302992 |
gaactgatggaagtgtttgtattgagtagttgctataaagagttgaggtgctgtcgtcggaggttagggttgaagaagaagaagtgcttgagtctgatgc |
37302893 |
T |
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| Q |
313 |
atgttgt |
319 |
Q |
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| T |
37302892 |
atgttgt |
37302886 |
T |
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