View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9132_low_16 (Length: 276)
Name: NF9132_low_16
Description: NF9132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9132_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 26686958 - 26686786
Alignment:
| Q |
1 |
atgggaaagctttctctcccatccccttctctacgggaaaatactctatgcctgtggtaccttaagcaaggcaaccttcatgaagatctttgtttacaca |
100 |
Q |
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| T |
26686958 |
atgggaaagctttctctcccatccccttctctacgggaaaatactctatgcttgtggtaccttaagcaaggcaaccttcatgaagatctttgtttacata |
26686859 |
T |
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| Q |
101 |
tacaaatagacattcttaaatatgac--gtcaaagttgatctcttatatattgttactagtatagctcatgtt |
171 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |
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| T |
26686858 |
tacaaatagacattcttaaatatgacaagtcaaagttgatctcttatatattgttattagtatagcttatgtt |
26686786 |
T |
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