View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9133_high_37 (Length: 240)
Name: NF9133_high_37
Description: NF9133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9133_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 4231685 - 4231471
Alignment:
| Q |
17 |
agtatcacgccatgtgatgtactcaaaaccttaaaagcctaggaaatacgcaaccttacaaagctcagtgatctcaaagtctaacctcattctagcgttg |
116 |
Q |
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| T |
4231685 |
agtatcacgccatgtgatgtactcaaaaccttaaa-gcctaggaaatacgcaagcttacaaagctcagtgatctcaaagtctaacctcattctagcgttg |
4231587 |
T |
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| Q |
117 |
aattcatctacctctcttgtgcacaactaccattcaccaatagaccgtctacataaagacatatgatcggtaaatataaattcactcattctttgccttt |
216 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4231586 |
aattcatctacctct--tgtgcacaactaccattcaccaatagaccgtctacaaaaagacatatgatcggtaaatataaattcactcattctttgccttt |
4231489 |
T |
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| Q |
217 |
tacatacactctctgctt |
234 |
Q |
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|||||||||||| ||||| |
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| T |
4231488 |
tacatacactctatgctt |
4231471 |
T |
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