View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9133_low_1 (Length: 2652)

Name: NF9133_low_1
Description: NF9133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9133_low_1
NF9133_low_1
[»] chr3 (64 HSPs)
chr3 (1535-2635)||(8359967-8361070)
chr3 (18-665)||(8362293-8362941)
chr3 (840-1325)||(8361280-8361785)
chr3 (1839-2128)||(8356305-8356594)
chr3 (661-799)||(8362111-8362249)
chr3 (1925-2091)||(8260617-8260783)
chr3 (1925-2079)||(8258522-8258676)
chr3 (1925-2091)||(8352775-8352941)
chr3 (1390-1461)||(8361144-8361215)
chr3 (1925-2079)||(8265595-8265749)
chr3 (277-434)||(29127862-29128024)
chr3 (1883-2014)||(8252954-8253085)
chr3 (277-434)||(35315899-35316061)
chr3 (319-434)||(45877397-45877517)
chr3 (1927-2090)||(8334051-8334214)
chr3 (1925-2014)||(8350108-8350197)
chr3 (1708-1773)||(8356616-8356681)
chr3 (286-430)||(30767258-30767407)
chr3 (319-438)||(29135852-29135976)
chr3 (277-435)||(29762157-29762320)
chr3 (277-435)||(54261168-54261331)
chr3 (277-434)||(13893869-13894031)
chr3 (300-435)||(32873574-32873713)
chr3 (281-434)||(49198294-49198452)
chr3 (277-435)||(15320128-15320291)
chr3 (277-434)||(48341963-48342125)
chr3 (278-434)||(26207804-26207965)
chr3 (319-435)||(33251604-33251725)
chr3 (307-434)||(10855327-10855459)
chr3 (304-438)||(39849011-39849149)
chr3 (274-360)||(4638176-4638262)
chr3 (277-434)||(7650170-7650332)
chr3 (277-434)||(25294903-25295065)
chr3 (277-387)||(34662321-34662431)
chr3 (295-361)||(43330752-43330818)
chr3 (286-435)||(49543461-49543615)
chr3 (277-434)||(51060283-51060445)
chr3 (277-346)||(47749107-47749176)
chr3 (277-435)||(3136696-3136858)
chr3 (277-435)||(7328786-7328948)
chr3 (277-388)||(28572213-28572324)
chr3 (277-340)||(47471873-47471936)
chr3 (279-430)||(45402355-45402508)
chr3 (277-358)||(3507535-3507616)
chr3 (2032-2089)||(8252897-8252954)
chr3 (307-387)||(2030442-2030521)
chr3 (277-385)||(7310705-7310813)
chr3 (390-434)||(11687229-11687273)
chr3 (300-356)||(23511593-23511649)
chr3 (390-430)||(30735065-30735105)
chr3 (390-434)||(46529990-46530034)
chr3 (303-434)||(51682982-51683118)
chr3 (2032-2091)||(8350049-8350108)
chr3 (390-433)||(35923743-35923786)
chr3 (300-358)||(7648764-7648822)
chr3 (300-358)||(26043836-26043894)
chr3 (284-358)||(55069688-55069762)
chr3 (295-360)||(2668083-2668148)
chr3 (284-361)||(24506657-24506734)
chr3 (318-387)||(33688946-33689015)
chr3 (390-435)||(37092625-37092670)
chr3 (390-435)||(42412894-42412939)
chr3 (277-346)||(49021205-49021274)
chr3 (284-361)||(50405612-50405689)
[»] chr5 (55 HSPs)
chr5 (277-435)||(42861219-42861382)
chr5 (277-434)||(1538375-1538537)
chr5 (277-436)||(20525780-20525944)
chr5 (277-436)||(5731921-5732085)
chr5 (277-434)||(42086271-42086433)
chr5 (319-435)||(28857071-28857192)
chr5 (277-389)||(40117409-40117521)
chr5 (319-434)||(19572668-19572788)
chr5 (277-435)||(20682618-20682782)
chr5 (300-383)||(11845825-11845908)
chr5 (277-435)||(12704957-12705120)
chr5 (277-438)||(41163461-41163626)
chr5 (277-386)||(13664257-13664366)
chr5 (300-431)||(23247375-23247511)
chr5 (277-435)||(9812815-9812978)
chr5 (281-388)||(15034070-15034177)
chr5 (277-340)||(18045682-18045744)
chr5 (308-434)||(26077085-26077216)
chr5 (277-434)||(8513463-8513625)
chr5 (277-434)||(37263185-37263346)
chr5 (300-431)||(7308388-7308524)
chr5 (391-435)||(14728025-14728069)
chr5 (390-434)||(23383592-23383636)
chr5 (327-434)||(25417234-25417345)
chr5 (303-434)||(35561845-35561981)
chr5 (300-435)||(39728330-39728470)
chr5 (277-435)||(12766074-12766237)
chr5 (301-435)||(30349522-30349661)
chr5 (390-436)||(2485139-2485185)
chr5 (285-387)||(38897728-38897829)
chr5 (284-358)||(39099787-39099861)
chr5 (393-434)||(18136402-18136443)
chr5 (389-438)||(38297082-38297131)
chr5 (390-434)||(4016374-4016418)
chr5 (390-434)||(6767170-6767214)
chr5 (2585-2633)||(15798923-15798971)
chr5 (309-385)||(20705561-20705637)
chr5 (390-434)||(24498927-24498971)
chr5 (390-434)||(28856921-28856965)
chr5 (390-434)||(35403631-35403675)
chr5 (2584-2635)||(7963371-7963422)
chr5 (277-384)||(9805003-9805110)
chr5 (300-387)||(14588641-14588728)
chr5 (295-358)||(14974343-14974406)
chr5 (277-340)||(16757421-16757484)
chr5 (390-437)||(24500096-24500143)
chr5 (393-435)||(1826800-1826842)
chr5 (300-358)||(20255394-20255452)
chr5 (277-339)||(27648426-27648488)
chr5 (300-374)||(35245030-35245104)
chr5 (393-427)||(42292145-42292179)
chr5 (390-435)||(3654031-3654076)
chr5 (390-435)||(7866524-7866569)
chr5 (321-358)||(21375376-21375413)
chr5 (2584-2633)||(28717351-28717400)
[»] chr8 (35 HSPs)
chr8 (277-434)||(8141049-8141211)
chr8 (277-430)||(33401801-33401958)
chr8 (304-434)||(14666099-14666234)
chr8 (277-434)||(45521116-45521277)
chr8 (282-434)||(1012983-1013140)
chr8 (277-435)||(3418514-3418677)
chr8 (280-434)||(9859999-9860159)
chr8 (300-430)||(35496279-35496413)
chr8 (277-429)||(43032853-43033010)
chr8 (303-434)||(44893305-44893441)
chr8 (277-435)||(15884557-15884719)
chr8 (277-438)||(27975834-27976000)
chr8 (277-438)||(28033103-28033269)
chr8 (319-435)||(2467161-2467282)
chr8 (277-346)||(11298268-11298337)
chr8 (390-434)||(34846761-34846805)
chr8 (284-434)||(11785864-11786017)
chr8 (277-435)||(17981387-17981550)
chr8 (277-434)||(10927553-10927715)
chr8 (301-434)||(18091348-18091485)
chr8 (317-434)||(38922455-38922577)
chr8 (390-435)||(6940504-6940549)
chr8 (277-434)||(583761-583921)
chr8 (277-434)||(43027252-43027414)
chr8 (285-358)||(3567932-3568005)
chr8 (389-434)||(17845680-17845725)
chr8 (319-435)||(18373956-18374077)
chr8 (390-434)||(10535522-10535566)
chr8 (390-434)||(22810027-22810071)
chr8 (390-434)||(24938681-24938725)
chr8 (277-384)||(4479297-4479403)
chr8 (2587-2634)||(9944470-9944517)
chr8 (392-435)||(24837188-24837231)
chr8 (400-434)||(33935864-33935898)
chr8 (277-346)||(36662444-36662513)
[»] chr6 (28 HSPs)
chr6 (277-434)||(5253224-5253386)
chr6 (277-431)||(13036005-13036164)
chr6 (277-434)||(8932608-8932770)
chr6 (277-434)||(8944074-8944236)
chr6 (287-435)||(9179747-9179900)
chr6 (277-435)||(14107359-14107522)
chr6 (277-434)||(21898595-21898757)
chr6 (277-435)||(8611975-8612138)
chr6 (300-434)||(29333163-29333301)
chr6 (319-431)||(9147251-9147368)
chr6 (390-434)||(3030737-3030781)
chr6 (300-388)||(12606428-12606516)
chr6 (277-434)||(8938658-8938820)
chr6 (390-435)||(15643947-15643992)
chr6 (277-358)||(30410473-30410554)
chr6 (321-365)||(11142624-11142668)
chr6 (390-434)||(19230676-19230720)
chr6 (277-434)||(19089445-19089607)
chr6 (325-435)||(24671915-24672030)
chr6 (277-430)||(30788854-30789010)
chr6 (284-358)||(32157175-32157249)
chr6 (390-435)||(2271420-2271465)
chr6 (277-346)||(9633626-9633695)
chr6 (392-437)||(10311590-10311635)
chr6 (2584-2635)||(864330-864381)
chr6 (390-435)||(5759574-5759619)
chr6 (277-358)||(8149798-8149879)
chr6 (277-358)||(34954620-34954701)
[»] chr4 (48 HSPs)
chr4 (277-434)||(53599008-53599170)
chr4 (277-434)||(24166398-24166560)
chr4 (277-434)||(38075381-38075543)
chr4 (277-435)||(55920981-55921144)
chr4 (277-434)||(29895735-29895897)
chr4 (277-434)||(52950030-52950192)
chr4 (319-434)||(1446774-1446894)
chr4 (277-385)||(10541018-10541125)
chr4 (277-435)||(2559254-2559417)
chr4 (277-435)||(38165974-38166137)
chr4 (277-434)||(6779159-6779321)
chr4 (295-435)||(5472867-5473012)
chr4 (277-434)||(31588632-31588796)
chr4 (277-364)||(7246647-7246734)
chr4 (277-415)||(24850628-24850770)
chr4 (277-410)||(36145216-36145354)
chr4 (390-435)||(14567198-14567243)
chr4 (309-370)||(20421790-20421851)
chr4 (278-435)||(1940779-1940938)
chr4 (281-389)||(30317231-30317339)
chr4 (287-434)||(20532420-20532572)
chr4 (390-436)||(3574565-3574611)
chr4 (281-434)||(12703550-12703708)
chr4 (324-429)||(40272379-40272489)
chr4 (280-358)||(46108720-46108798)
chr4 (277-358)||(8424583-8424664)
chr4 (390-434)||(19651564-19651608)
chr4 (390-434)||(34667721-34667765)
chr4 (277-345)||(40780862-40780930)
chr4 (390-434)||(41339514-41339558)
chr4 (390-434)||(43458561-43458605)
chr4 (280-340)||(50485990-50486050)
chr4 (277-384)||(16450303-16450410)
chr4 (277-388)||(42722578-42722689)
chr4 (400-430)||(14859263-14859293)
chr4 (275-385)||(21429303-21429413)
chr4 (309-355)||(26479982-26480028)
chr4 (392-434)||(26480070-26480112)
chr4 (393-431)||(29588687-29588725)
chr4 (393-435)||(48317397-48317439)
chr4 (275-388)||(295532-295644)
chr4 (277-346)||(4738659-4738728)
chr4 (390-431)||(6032759-6032800)
chr4 (389-434)||(12887321-12887366)
chr4 (390-435)||(13073485-13073530)
chr4 (277-346)||(17080084-17080153)
chr4 (390-435)||(27531776-27531821)
chr4 (284-345)||(54946291-54946352)
[»] chr1 (43 HSPs)
chr1 (277-436)||(43959823-43959987)
chr1 (277-434)||(5855466-5855628)
chr1 (277-430)||(32150924-32151082)
chr1 (277-445)||(8763924-8764097)
chr1 (277-384)||(18649354-18649461)
chr1 (319-435)||(49078057-49078178)
chr1 (319-434)||(48798114-48798234)
chr1 (280-434)||(10336460-10336619)
chr1 (300-434)||(10422732-10422871)
chr1 (277-431)||(10172973-10173132)
chr1 (277-433)||(41663858-41664019)
chr1 (277-389)||(26660132-26660243)
chr1 (277-430)||(32142848-32143005)
chr1 (277-435)||(26325755-26325918)
chr1 (277-388)||(50503363-50503474)
chr1 (277-430)||(9659181-9659338)
chr1 (295-435)||(9853297-9853441)
chr1 (319-434)||(33004059-33004179)
chr1 (303-430)||(31734237-31734368)
chr1 (393-437)||(33418238-33418282)
chr1 (319-434)||(40288521-40288641)
chr1 (287-346)||(12036756-12036815)
chr1 (277-435)||(17642006-17642169)
chr1 (389-436)||(31152658-31152705)
chr1 (277-434)||(11397891-11398052)
chr1 (281-383)||(42710144-42710246)
chr1 (277-385)||(12744525-12744633)
chr1 (277-385)||(12755515-12755623)
chr1 (300-435)||(14254293-14254433)
chr1 (2579-2635)||(15470879-15470935)
chr1 (390-434)||(31576667-31576711)
chr1 (390-437)||(12036864-12036911)
chr1 (319-386)||(28324624-28324691)
chr1 (325-383)||(14357755-14357813)
chr1 (390-436)||(15238226-15238272)
chr1 (318-435)||(34877933-34878055)
chr1 (2586-2628)||(38041128-38041170)
chr1 (284-358)||(50094929-50095003)
chr1 (285-358)||(16956491-16956564)
chr1 (319-360)||(19195389-19195430)
chr1 (277-350)||(34719809-34719882)
chr1 (390-435)||(41743216-41743261)
chr1 (2586-2635)||(50272590-50272639)
[»] chr2 (38 HSPs)
chr2 (277-434)||(12864167-12864329)
chr2 (277-434)||(18902531-18902693)
chr2 (277-435)||(33005694-33005856)
chr2 (277-434)||(3811692-3811854)
chr2 (277-434)||(8410074-8410236)
chr2 (277-434)||(38005345-38005507)
chr2 (295-434)||(331444-331588)
chr2 (319-434)||(6358194-6358314)
chr2 (277-434)||(7747217-7747379)
chr2 (277-434)||(9360749-9360911)
chr2 (277-434)||(14169610-14169772)
chr2 (309-434)||(34356149-34356279)
chr2 (286-434)||(10026626-10026779)
chr2 (277-417)||(41220595-41220740)
chr2 (295-434)||(2550811-2550955)
chr2 (320-431)||(21286390-21286506)
chr2 (277-385)||(28616380-28616488)
chr2 (277-435)||(29422157-29422320)
chr2 (277-340)||(44945635-44945698)
chr2 (277-434)||(11069821-11069983)
chr2 (277-358)||(34346288-34346369)
chr2 (295-431)||(45263686-45263827)
chr2 (292-388)||(7787050-7787146)
chr2 (390-434)||(21180433-21180477)
chr2 (277-435)||(3643888-3644051)
chr2 (277-388)||(12455304-12455415)
chr2 (277-340)||(21641992-21642055)
chr2 (292-434)||(14853381-14853530)
chr2 (321-434)||(18649071-18649189)
chr2 (286-434)||(10046487-10046639)
chr2 (277-346)||(10823096-10823165)
chr2 (277-358)||(16325619-16325700)
chr2 (319-434)||(20612578-20612699)
chr2 (277-418)||(25540405-25540551)
chr2 (307-434)||(15079426-15079558)
chr2 (390-437)||(2528460-2528507)
chr2 (363-434)||(23500769-23500844)
chr2 (321-383)||(25604594-25604655)
[»] chr7 (31 HSPs)
chr7 (277-434)||(42210263-42210425)
chr7 (277-434)||(48804629-48804791)
chr7 (309-437)||(22573756-22573888)
chr7 (284-435)||(13095803-13095959)
chr7 (273-434)||(45960000-45960165)
chr7 (277-434)||(27875089-27875250)
chr7 (277-388)||(38578868-38578979)
chr7 (335-435)||(22268088-22268193)
chr7 (320-434)||(43925458-43925577)
chr7 (320-434)||(47341822-47341941)
chr7 (277-438)||(1605883-1606049)
chr7 (277-434)||(4195203-4195365)
chr7 (277-434)||(10047877-10048039)
chr7 (277-434)||(17748383-17748545)
chr7 (303-432)||(34659174-34659308)
chr7 (277-435)||(43861973-43862136)
chr7 (277-361)||(3353448-3353532)
chr7 (284-435)||(22973912-22974068)
chr7 (277-435)||(27028224-27028387)
chr7 (300-340)||(19914727-19914767)
chr7 (284-435)||(21530693-21530849)
chr7 (390-437)||(4228870-4228917)
chr7 (277-435)||(22993368-22993531)
chr7 (280-430)||(42032046-42032201)
chr7 (296-358)||(29805460-29805522)
chr7 (319-431)||(1797409-1797526)
chr7 (394-435)||(5039541-5039582)
chr7 (277-434)||(8734687-8734849)
chr7 (390-435)||(19914821-19914866)
chr7 (277-431)||(5069816-5069975)
chr7 (393-434)||(43346901-43346942)
[»] scaffold0002 (1 HSPs)
scaffold0002 (277-434)||(516-678)
[»] scaffold0291 (1 HSPs)
scaffold0291 (277-388)||(6852-6963)
[»] scaffold0170 (1 HSPs)
scaffold0170 (285-435)||(9790-9945)
[»] scaffold0316 (1 HSPs)
scaffold0316 (277-387)||(1615-1725)
[»] scaffold0005 (1 HSPs)
scaffold0005 (390-435)||(250132-250177)
[»] scaffold0016 (1 HSPs)
scaffold0016 (390-434)||(8829-8873)
[»] scaffold0006 (1 HSPs)
scaffold0006 (278-435)||(68462-68621)
[»] scaffold0209 (1 HSPs)
scaffold0209 (277-434)||(12521-12681)
[»] scaffold0029 (1 HSPs)
scaffold0029 (300-434)||(40990-41129)
[»] scaffold0010 (1 HSPs)
scaffold0010 (392-434)||(25905-25947)
[»] scaffold0004 (2 HSPs)
scaffold0004 (303-361)||(95008-95066)
scaffold0004 (284-355)||(7843-7914)
[»] scaffold0041 (1 HSPs)
scaffold0041 (277-358)||(25112-25193)
[»] scaffold0009 (2 HSPs)
scaffold0009 (277-345)||(42833-42901)
scaffold0009 (277-332)||(9495-9550)
[»] scaffold0223 (1 HSPs)
scaffold0223 (277-386)||(16878-16987)


Alignment Details
Target: chr3 (Bit Score: 933; Significance: 0; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 933; E-Value: 0
Query Start/End: Original strand, 1535 - 2635
Target Start/End: Complemental strand, 8361070 - 8359967
Alignment:
Q  1535 gttccaaaccatggtttaattccattaatcccaacggtaaaatcttgctaccccatagacaaatgaaacaacgtcgaaattttccatacactttagtccn 1634  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8361070 gttccaaaccatggtttaattccattaatcccaacggtaaaatcttgctaccccatagacaaatgaaacaacgtcgaaattttccatacactttagtcca 8360971  T
Q  1635 nnnnnnnnnnnnnnnccttgctccttaattaagataaatatgttcccaaatatgaaagaatttccaaacagtctcaaatatattctctttgcttgctaag 1734  Q
                   |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8360970 aaaaagaaaaaaaa-ccttgctcattaattaagataaatatgttcccaaatatgaaagaattttcaaacagtctcaaatatattctctttgcttgctaag 8360872  T
Q  1735 caaatggagtaacgtagaaccttcctaacctttttatgactgtgtggtctcaaatattatgacctataaatatagaccaagataattacctgatttcaat 1834  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8360871 caaatggagtaacgtagaaccttcctaacctttttatgactgtgtggtctcaaatattatgacctataaatatagaccaagataattacctgatttcaat 8360772  T
Q  1835 ctacaacattacaactaaatcatttcaacaacttgcacaattacacaaacaaaaacctcacttcaatttcaagtcacatctcaattaatcatggctttga 1934  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8360771 ctacaacattacaactaaatcatttcaacaacttgcacaattacacaaacaaaaacctcacttcaatttcaagtcacatctcaattaatcatggctttga 8360672  T
Q  1935 tttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatcttcaacttcaga 2034  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8360671 tttcagctttcttcaattgcttcggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatcttcaacttcaga 8360572  T
Q  2035 gaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttcccaattaacaataattattcctcactcatgtagtcactactcact 2134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8360571 gaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttcccgattaacaataattattcctcactcatgtagtcactactcact 8360472  T
Q  2135 agattgaatgcctcaaagttttatcatggtgattgtaatcggatttgagtagcatttgtactctcattaataaattttga--nnnnnnnnnnnctagtta 2232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||    
T  8360471 agattgaatgcctcaaagttttatcatggtgattgtaatcggatttgagtagcatttgtactctcattaataaattttgatttttttttccttctagtta 8360372  T
Q  2233 catcccataaaaattgagttacaaatttaaccatagtactgaaataaccctatttatat--aaaaaatttcaaaacccnnnnnnnnaaaggaattatttt 2330  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||        ||||||||||||||    
T  8360371 catcccataaaaatccagttacaaatttaaccatagtactgaaataaccctatttatataaaaaaaatttcaaaacccttttttttaaaggaattatttt 8360272  T
Q  2331 caaaatcatttttaatctcactctaaatctaacctctctttcatagacatcaatggatatgtgatcaaatttgataaaagattgacaagttgttccatta 2430  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8360271 caaaatcatttttaatctcactctaaatctcacctgtctttcatagacatcaatggatatgtgatcaaatttgataaaagattgacaagttgttccatta 8360172  T
Q  2431 ataattaattcatagcatatcttcattcagagatatgttgatattttcttgtttatagtaatctaagggagacagaaaaaagaatgcaaaacgaaagact 2530  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8360171 ataattaattcatagcatatcttcattcagagatatgttaatattttcttgtttatagtaatctaagggagacagaaaaaagaatgcaaaacgaaagact 8360072  T
Q  2531 aaagtttatggaattaagttcacgcaaaatctacgagaagaagtttttagaagaatgctcttctcccaacaagatttgctcatttccaactaaactttca 2630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8360071 aaagtttatggaattaagttcacgcaaaatctacgagaagaagtttttagaagaatgctcctctcccaacaagatttgctcatttccaactaaactttca 8359972  T
Q  2631 aaaat 2635  Q
    |||||    
T  8359971 aaaat 8359967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 18 - 665
Target Start/End: Complemental strand, 8362941 - 8362293
Alignment:
Q  18 agtcttcccttaaaagatgaannnnnnnaccagtttaactatttttaaactttccgttaactgttgatggtgatttgcagactcctgttctgtgttggaa 117  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8362941 agtcttcccttaaaagatgaatttttttaccagtttaactatttttaaactttccgttaactgttgatggtgatttgcagactcctgttctatgttggaa 8362842  T
Q  118 gaaagttataaggtgtgggaattgatatccatctcaagattggctgcaaatactatatgaacatgacataatacaagtaacaccacaacgtaaatattgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8362841 gaaagttataaggtgtgggaattgatatccatctcaagattggctgcaaatactatatgaacatgacataatacaagtaacaccacaacgtaaatattgt 8362742  T
Q  218 cctcgataaaacagaaaatgacgtgaaaatagaacctatttgatattannnnnnnggcattcgcatcggtttcggatccactaaaggtgggcgattaatt 317  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||| ||| |||||    
T  8362741 cctcaataaaacagaaaatgacgtgaaaatagaacctatttgatattatttttttggcattcgcaccggtttcggatccactaaaggtggacgactaatt 8362642  T
Q  318 tggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccgatccttggaatgagctccttgctactgga 417  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||| ||||||||||||||| ||| ||| ||||||||||||||    
T  8362641 tggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtattccccgatccttagaaggagttccttgctactgga 8362542  T
Q  418 gcccaaacaacttggtttgaacctatttgatattagattaaagta-atataatctattggttggtgtgttgttctctttgacaatatttattaaacaagg 516  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8362541 gcccaagcaacttagtttgaacctatttgatattagattaaagtatatataatctattggttggtgtgttgttctctttgacaatatttattaaacaagg 8362442  T
Q  517 gaaccgaattgttaaagctaaaactaaagcttagatagcaagaaacttgaacaatgtaattgattgaaatcacaaaactgaattacatgtactgcttatg 616  Q
     |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8362441 taacataattgttaaagctaaaactaaagcttagatagcaagaaacttgaacaatgtaattgattgaaatcacaaaactgaattacatgtactgcttatg 8362342  T
Q  617 tgcatatttatagattttacaatacacgattctttaactaattatagtt 665  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8362341 tgcatatttatagattttacaatacacgattctttaactaattatagtt 8362293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 840 - 1325
Target Start/End: Complemental strand, 8361785 - 8361280
Alignment:
Q  840 cctcaacaatacttattagtttaacttcatgaatgctttttactatttcatatatttcaaacaaaatctatcattgttattccggaatgctagttttagt 939  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  8361785 cctcaacaatacttattagtttaacttcatgaatgctttttactatttcatatatttcaaacaaaatctatcattattattcgagaatgctagttttagt 8361686  T
Q  940 gagttatatgatatattttgcatcaaatatatccttcnnnnnnnnaaagcatcaaacatattaatttatcgtgacta--gtatatcggtattaatatann 1037  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||  |||||||||||||||||||      
T  8361685 gagttatatgatatattttgcatcaaatatatcctt-ttttttttaaagcatcaaacatattaatttatcgtgactatagtatatcggtattaatatatt 8361587  T
Q  1038 nnnnn-acaactgtaattaaataggattagtcaaaaatacttatccatctaaaatcgtatttaattggattggatttgatttatattttttcaatgatca 1136  Q
          |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8361586 ttttttacaactgtaattaaattggattagtcaaaaatacttatccatctaaaatcgtatttaattggattggatttgacttatattttttcaatgatca 8361487  T
Q  1137 aatcaaactccgtgtgatttaaactttgatattacatttttaaattaggtttaattcactcttat-----------------aaaaattgttgtctattc 1219  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||| ||||||||    
T  8361486 aatcaaactctgtatgatttaaactttgatattacatttttaaattaggtttaattcactcttataaaacgtcttgatagataaaaattgtcgtctattc 8361387  T
Q  1220 tctatgtgacttttttccttgaataatgtg-annnnnnnnngtctcaaaaccgataaaaattgcattttgaacaccccaaattgtaatcaaccagacaat 1318  Q
    |||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8361386 tctatgtgacttttttccttgaataatgtgaatttttttttgtctcaaaaccgataaaaattgcattttgaacaccccaaattgtaatcaaccagacaat 8361287  T
Q  1319 tgaaatg 1325  Q
    |||||||    
T  8361286 tgaaatg 8361280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 226; E-Value: 1e-123
Query Start/End: Original strand, 1839 - 2128
Target Start/End: Complemental strand, 8356594 - 8356305
Alignment:
Q  1839 aacattacaactaaatcatttcaacaacttgcacaattacacaaacaaaaacctcacttcaatttcaagtcacatctcaattaatcatggctttgatttc 1938  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  8356594 aacattacaactaaatcatttcagcaactggcacaattacacaaacaaaaacctcatttcaatttcaagtcacatctcaattaatcatggctttgatttt 8356495  T
Q  1939 agctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatcttcaacttcagagaaa 2038  Q
    | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  8356494 accgttcttcaattgctttggtctctcttcaaactcatcatctcaagtttctgattatgctcaaaattcatctcaaatgaaatcttcaacttcagagaaa 8356395  T
Q  2039 ccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttcccaattaacaataattattcctcactcatgtagtcacta 2128  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||  | ||||||||||||||||||||| |||||||||||    
T  8356394 ccaaagagcaaggaaaaatcaatgggagctccaattgtagttccttatttccctgtcaacaataattattcctcactcttgtagtcacta 8356305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-57
Query Start/End: Original strand, 661 - 799
Target Start/End: Complemental strand, 8362249 - 8362111
Alignment:
Q  661 tagtttgacaagtaaccttcataatctcacttctaactacaattaacatcccctcaagctgaaatatatatatttttcattcaaagattactttcnnnnn 760  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  8362249 tagtttgacaagtaaccttcataatctcacttctaactacaattaacatcccctcaagctgaaatatatatatttttcattcaaagattactttcttttt 8362150  T
Q  761 nngatgtgtaatgtaacaaacaatattggattaatttat 799  Q
      | |||||||||||||||||||||||||||||||||||    
T  8362149 ttggtgtgtaatgtaacaaacaatattggattaatttat 8362111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 1925 - 2091
Target Start/End: Complemental strand, 8260783 - 8260617
Alignment:
Q  1925 atggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatctt 2024  Q
    ||||||||||||||| | ||||| | ||||||||| |  |||| | ||| ||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  8260783 atggctttgatttcatccttcttaagttgctttggccattctttagactcatcatctcaagtttctgattatgatgaaaaatcatctaaattgaaatctt 8260684  T
Q  2025 caacttcagagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttccc 2091  Q
    || ||| |||||||| ||||| ||| ||||||||||   ||||||||||||||||| ||||||||||    
T  8260683 catctttagagaaacaaaagagcaaagaaaaatcaaagagagctccaattgtagtttcttatttccc 8260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-31
Query Start/End: Original strand, 1925 - 2079
Target Start/End: Complemental strand, 8258676 - 8258522
Alignment:
Q  1925 atggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatctt 2024  Q
    ||||||||||||||| |  | || | ||||||||| |  |||||||||| ||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  8258676 atggctttgatttcatccattttaagttgctttggccattcttcaaactcatcatctcaagtttctgattatgatgaaaaatcatctaaattgaaatctt 8258577  T
Q  2025 caacttcagagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagt 2079  Q
    || ||| |||||||| |||||  |||||||||||||  |||||||||||||||||    
T  8258576 catctttagagaaacaaaagagtaaggaaaaatcaaagggagctccaattgtagt 8258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-31
Query Start/End: Original strand, 1925 - 2091
Target Start/End: Complemental strand, 8352941 - 8352775
Alignment:
Q  1925 atggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatctt 2024  Q
    ||||||||||||||| | || ||||||||||||||||  ||||| |||| ||| |||||||||| |||||||| |||||| |||||||||  ||||||||    
T  8352941 atggctttgatttcatcatttttcaattgctttggtccttcttcgaactcatcttctcaagtttatgattatgatgaaaaatcatctcaatcgaaatctt 8352842  T
Q  2025 caacttcagagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttccc 2091  Q
    || ||||||| |||  |||||  ||||||||||| |  |||||| ||||||||||| ||||||||||    
T  8352841 catcttcagaaaaattaaagagaaaggaaaaatctaatggagcttcaattgtagtttcttatttccc 8352775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-29
Query Start/End: Original strand, 1390 - 1461
Target Start/End: Complemental strand, 8361215 - 8361144
Alignment:
Q  1390 gttccaagccatgcattaattttattccatctttttgcaacacgcttattcaaatagatccatcgatacaag 1461  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8361215 gttccaagccatgcattaattttattccatctttttgcaacgcgcttattcaaatagatccatcgatacaag 8361144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-29
Query Start/End: Original strand, 1925 - 2079
Target Start/End: Complemental strand, 8265749 - 8265595
Alignment:
Q  1925 atggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatctt 2024  Q
    ||||||||||||||| | ||||| | ||||||||| |  |||| | ||| ||| ||||||||||||||||||| |||||| |||||| || |||||||||    
T  8265749 atggctttgatttcatccttcttaagttgctttggccattctttagactcatcgtctcaagtttctgattatgatgaaaaatcatctaaattgaaatctt 8265650  T
Q  2025 caacttcagagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagt 2079  Q
    || ||| |||||||| |||||  |||||||||||||  |||||||||||||||||    
T  8265649 catctttagagaaacaaaagagtaaggaaaaatcaaagggagctccaattgtagt 8265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-28
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 29128024 - 29127862
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||||||||||| ||||  |||||||||||||||||||||| ||||  ||| |||||||  | |||||||| ||| |    
T  29128024 ttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacc 29127925  T
Q  377 cgatattcccc-ga----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||| ||    ||||||||| || |||||||| |||||||||||||||||||||||    
T  29127924 cgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-27
Query Start/End: Original strand, 1883 - 2014
Target Start/End: Complemental strand, 8253085 - 8252954
Alignment:
Q  1883 acaaaaacctcacttcaatttcaagtcacatctcaattaatcatggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctc 1982  Q
    |||||||||||| |||| ||||||||| || |||| ||| | ||||||||||||||| | ||||||||||| |||||||  |||||||||| ||| ||||    
T  8253085 acaaaaacctcatttcattttcaagtcccacctcatttattgatggctttgatttcatcattcttcaattgttttggtccttcttcaaactcatcttctc 8252986  T
Q  1983 aagtttctgattatgttgaaaattcatctcaa 2014  Q
    ||||||||||| ||| ||||||||||| ||||    
T  8252985 aagtttctgataatgctgaaaattcatgtcaa 8252954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 35316061 - 35315899
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| ||| |||||||| ||||   ||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  35316061 ttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 35315962  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||| |||      ||||||||| |||||| |||| |||||||||||||||||||||||    
T  35315961 cgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 45877517 - 45877397
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||| | ||||| ||| |||||||||| |||||||| ||| ||| |||||||||      ||||||||| | ||||||||| ||    
T  45877517 ggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccac 45877418  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||||||||||||||||    
T  45877417 tggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-20
Query Start/End: Original strand, 1927 - 2090
Target Start/End: Complemental strand, 8334214 - 8334051
Alignment:
Q  1927 ggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaaatgaaatcttca 2026  Q
    ||||||||| ||| | | ||||||||| |||||||  |||||||||| ||| || ||||||| |||  ||| ||||||||| ||||||  |||| |||||    
T  8334214 ggctttgatatcaccatacttcaattgttttggtccttcttcaaactcatcttcacaagtttatgagaatgctgaaaattcttctcaatcgaaaccttca 8334115  T
Q  2027 acttcagagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttcc 2090  Q
     ||||||   || ||||| | ||||||||||||| ||||| ||||||||||||| |||||||||    
T  8334114 tcttcaggagaatcaaagttaaaggaaaaatcaaaaggagttccaattgtagtttcttatttcc 8334051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 1925 - 2014
Target Start/End: Complemental strand, 8350197 - 8350108
Alignment:
Q  1925 atggctttgatttcagctttcttcaattgctttggtctctcttcaaacttatcatctcaagtttctgattatgttgaaaattcatctcaa 2014  Q
    ||||||||||||||| | ||||||||||| |||||||  |||||||||| ||| ||||||||||||||| ||| ||||||||||| ||||    
T  8350197 atggctttgatttcatcattcttcaattgttttggtccttcttcaaactcatcttctcaagtttctgataatgctgaaaattcatgtcaa 8350108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 1708 - 1773
Target Start/End: Complemental strand, 8356681 - 8356616
Alignment:
Q  1708 tcaaatatattctctttgcttgctaagcaaatggagtaacgtagaaccttcctaacctttttatga 1773  Q
    |||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||    
T  8356681 tcaaatatattctccttgcttgctaagcaaatggtccaacgtagaaccttcctaacctttttatga 8356616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 286 - 430
Target Start/End: Original strand, 30767258 - 30767407
Alignment:
Q  286 gtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcc 385  Q
    ||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||  ||||| ||| ||||||| || |||||||| ||| ||||||||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattcc 30767357  T
Q  386 cc-----gatccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    ||      |||||||||| || |||||||| |||||||||||| ||||||    
T  30767358 ccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 29135976 - 29135852
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||||||| |||||||||      |||||||||  |||||||||| ||    
T  29135976 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccac 29135877  T
Q  414 tggagcccaaacaacttggtttgaa 438  Q
    |||||||||| ||| ||||||||||    
T  29135876 tggagcccaagcaatttggtttgaa 29135852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 29762157 - 29762320
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||   |||||||| |||||||||||| ||||| ||| ||||||| || |||  ||| | | |    
T  29762157 ttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacc 29762256  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||||||||||     ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  29762257 cgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 54261331 - 54261168
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||  ||| ||||  |||||||||||||||||||||| ||||| |||  |||||| |  || | ||| ||| |    
T  54261331 ttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacc 54261232  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || ||||||||       ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  54261231 cggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggttt 54261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 13894031 - 13893869
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  ||||||| |||||||||||| ||||  ||||| || ||||||||||||| | ||  |||  |||||| || ||||||||  || |    
T  13894031 ttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacc 13893932  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||||||||||||||    
T  13893931 cggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 32873574 - 32873713
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccgat----ccttg 395  Q
    |||||||||||| |||| |||||||| |||||||||||| | |||||||||  ||||||  | || | ||| ||| | | ||||||| | |    |||||    
T  32873574 aaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccgggtacgtccttg 32873673  T
Q  396 gaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32873674 gaatgagctccttgccactggagcccaaacaacttggttt 32873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 281 - 434
Target Start/End: Complemental strand, 49198452 - 49198294
Alignment:
Q  281 catcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgat 380  Q
    |||||||||| ||||||| || ||||| ||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| || || | ||| ||| ||| |    
T  49198452 catcggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggt 49198353  T
Q  381 attccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||      |||||||||  | |||||||  |||||||||||||||||||||||    
T  49198352 attccccggatatgtccttggaagaaactccttgtcactggagcccaaacaacttggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 15320291 - 15320128
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||  ||||| |||   ||||| |  || ||||| ||| |    
T  15320291 ttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacc 15320192  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  15320191 cggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttt 15320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 48342125 - 48341963
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| | ||||| ||||||| |||| ||| ||| |||| ||| ||||||||||||||||||| ||| | |||  |||||| || || | ||| ||| |    
T  48342125 ttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacc 48342026  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||       ||||||||| ||||||||||| |||||||||||||||||||||||    
T  48342025 cggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 278 - 434
Target Start/End: Original strand, 26207804 - 26207965
Alignment:
Q  278 tcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatcc 377  Q
    ||||| ||||||| || |||||||   ||| ||| ||||  |||||||||||||||||||||  ||||| |||  |||||| ||  ||| ||| ||| ||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  378 gatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    | |||||||||     |||||||||| ||||||||||| |||||||||||| ||||||||||    
T  26207904 ggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 33251725 - 33251604
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||  ||||| |||| |||||| |||| || ||| ||| ||| |||||||| |     ||||||||| |||||| |||| ||    
T  33251725 ggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaaggagctcattgccac 33251626  T
Q  414 tggagcccaaacaacttggttt 435  Q
     |||||||||||||||||||||    
T  33251625 cggagcccaaacaacttggttt 33251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 434
Target Start/End: Complemental strand, 10855459 - 10855327
Alignment:
Q  307 ggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatga 401  Q
    ||||| ||||| || || |||||||||||||||| ||||| |||  |||||| || ||||||||  || ||| |||| ||| |     ||||||||| ||    
T  10855459 ggcgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaagga 10855360  T
Q  402 gctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| |||||||||||||||||||||||    
T  10855359 gctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 39849149 - 39849011
Alignment:
Q  304 gtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaa 398  Q
    |||||||| ||||  |||||||||||||||||||||  ||||| |||  |||||| || |||| ||| ||| |||| |||||| ||     |||||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgtt-cctctgggaatcgaacccgaaattccctgagtacgtccttggaa 39849051  T
Q  399 tgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
     ||||||||||| |||||||||||| | ||||||||||||    
T  39849050 ggagctccttgccactggagcccaagcgacttggtttgaa 39849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 4638262 - 4638176
Alignment:
Q  274 gcattcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttc 360  Q
    ||||||||||||||||| || ||| ||||||||||| | ||||  ||||| |||||||||| ||||| |||||||||  ||||||||    
T  4638262 gcattcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttc 4638176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 7650332 - 7650170
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  | |||| |||||||||||| ||||  ||||| ||||||||| ||| || ||||| ||| ||||||| || |||||||| ||| |    
T  7650332 ttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacc 7650233  T
Q  377 cgatattccc-----cgatccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||       ||||||| || || |||||||| |||||| ||||||||||||||||    
T  7650232 cggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggtt 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 25295065 - 25294903
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  | |||| || ||||| ||| ||||  ||||||||| |||||||||||| ||||| ||| |||||||||| | |  |||  || |    
T  25295065 ttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacc 25294966  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  25294965 cggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 34662321 - 34662431
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    ||||||||||||||  ||||||||||||||| ||| ||||| ||||||||| ||||| |||||| ||||  |||| ||| || |  ||| |||| ||| |    
T  34662321 ttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaacc 34662420  T
Q  377 cgatattcccc 387  Q
    |||||||||||    
T  34662421 cgatattcccc 34662431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 43330752 - 43330818
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttcc 361  Q
    |||| |||||||||||| ||||  ||||| |||||||||||||||| ||||||||| ||||||||||    
T  43330752 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtttcc 43330818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 435
Target Start/End: Complemental strand, 49543615 - 49543461
Alignment:
Q  286 gtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcc 385  Q
    ||||| || ||||||||||||||||| ||||| ||||| |||||||||||||||  ||||  |||| |||||| ||  ||  ||| ||| ||||||||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcc 49543516  T
Q  386 ccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    | |      ||||||||| ||||||||||| |||  ||||||||||| |||||||    
T  49543515 cgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattggttt 49543461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 51060283 - 51060445
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||   | ||||||||||||||||||| ||||  ||| ||||||| || |||  ||| ||| |    
T  51060283 ttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacc 51060382  T
Q  377 cgatattcccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||||||     ||||||||||| |||||  |||| ||||||| |||||||||||||||    
T  51060383 cgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaacttggtt 51060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 47749107 - 47749176
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||||||||||| || | || |||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  47749107 ttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactgg 47749176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 3136696 - 3136858
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || | || |||||||| ||| ||||  | |||||||||||||||||||| ||||  ||| ||||| |||| ||| |||| |||||    
T  3136696 ttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttg-ttcccctgaaaatcgaatc 3136794  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      |||||| || ||||| ||||| || |||||||||||||||| ||||    
T  3136795 cggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaactttgttt 3136858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 7328948 - 7328786
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  || |||| |||||||||||| ||||  |||||||||||| ||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  7328948 ttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 7328850  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||| ||||      ||||||||| || |||||||| ||| |||| ||| |||||||||||    
T  7328849 cggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaacttggttt 7328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 28572213 - 28572324
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||  ||||| |||  ||||||||| |||| ||| ||| |    
T  28572213 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacc 28572312  T
Q  377 cgatattccccg 388  Q
    |  |||||||||    
T  28572313 cagtattccccg 28572324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 47471936 - 47471873
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    |||||||||||||| || |||| |||||||| ||| ||||| |||||||||||||| |||||||    
T  47471936 ttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcg 47471873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 430
Target Start/End: Original strand, 45402355 - 45402508
Alignment:
Q  279 cgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccg 378  Q
    |||||| ||||| || ||||||||||||  ||| ||||  |||||||||||||||||||||| || || | | ||||||| || || | ||| ||| |||    
T  45402355 cgcatcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccg 45402454  T
Q  379 atattcccc--gatccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    |||||||||  |  | |  ||||||||| ||||| |||||||||||| ||||||    
T  45402455 atattccccgggtacatccgaatgagcttcttgccactggagcccaatcaactt 45402508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 3507535 - 3507616
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| ||||||| || |||| ||||||| |||| ||||  ||||| |||||||||||||||| ||||| ||| |||||||    
T  3507535 ttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 3507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 2032 - 2089
Target Start/End: Complemental strand, 8252954 - 8252897
Alignment:
Q  2032 agagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttc 2089  Q
    ||||||||||||||  |||||||||||||  ||||||||||||| |||| ||||||||    
T  8252954 agagaaaccaaagaggaaggaaaaatcaaagggagctccaattgcagtttcttatttc 8252897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 2030521 - 2030442
Alignment:
Q  307 ggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc 387  Q
    ||||||||||| | |||||| ||| ||||||||| |||||||||| ||||||| |  || |||| ||||||||||||||||    
T  2030521 ggcgattaattcgactcatgtgtaaaggcatgcgaactggtcaaacgttgttt-ctttgaaaatcgaatccgatattcccc 2030442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 7310705 - 7310813
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||| || |||| ||||  ||||| |||||||||||||||  || || ||| ||||||| ||||||| ||| ||| |    
T  7310705 ttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacc 7310804  T
Q  377 cgatattcc 385  Q
    || ||||||    
T  7310805 cggtattcc 7310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 11687229 - 11687273
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  11687229 tccttggaaggagcttcttgccactggagcccaaacaacttggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 23511649 - 23511593
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttg 356  Q
    |||||||| ||||||||  | |||||||||||||||||||| |||||||||| ||||    
T  23511649 aaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttg 23511593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 30735065 - 30735105
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  30735065 tccttggaatgagctccttgccactagagcccaaacaactt 30735105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 46529990 - 46530034
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  46529990 tccttgaaaggagctccttgccactggagcccaaacaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 434
Target Start/End: Original strand, 51682982 - 51683118
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttgga 397  Q
    ||||||||| ||||  ||||| || | ||||||||||| |||||||||  |||||| || |||| ||| ||| | | |||||||||      || |||||    
T  51682982 ggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttgga 51683081  T
Q  398 atgagctccttgctactggagcccaaacaacttggtt 434  Q
    | |||||||| || |||||||||||||||||||||||    
T  51683082 aggagctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 2032 - 2091
Target Start/End: Complemental strand, 8350108 - 8350049
Alignment:
Q  2032 agagaaaccaaagatcaaggaaaaatcaataggagctccaattgtagttacttatttccc 2091  Q
    ||||||| ||||||  |||||||||||||  |||||||||||| ||||| ||||||||||    
T  8350108 agagaaatcaaagaggaaggaaaaatcaaagggagctccaattatagtttcttatttccc 8350049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 35923743 - 35923786
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggt 433  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||    
T  35923743 tccttggaatgagctcattgccactagagcccaaacaacttggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 7648822 - 7648764
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||||||||| ||||  ||||| |||||||||| ||||| |||||||||| ||||||    
T  7648822 aaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgtt 7648764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 26043894 - 26043836
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| |||| ||||  |||||||||||||||||||||| ||||| ||| |||||||    
T  26043894 aaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 26043836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 55069688 - 55069762
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| || |||| ||||||| |||||||||  ||||| |||||||||||||| | ||||| |||| ||||||    
T  55069688 cggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgtt 55069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 2668148 - 2668083
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttc 360  Q
    |||||||||||| |||| ||||   |||| |||||||||||||||| ||||| ||| |||||||||    
T  2668148 ccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaagtgttgtttc 2668083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 24506657 - 24506734
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttcc 361  Q
    ||||||| || |||| || |||| |||| |||| || |||||||||||||||||| | |||||||||  |||||||||    
T  24506657 cggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttcc 24506734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 33689015 - 33688946
Alignment:
Q  318 tggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc 387  Q
    ||||||||||||||||||||||| ||||| ||| |||| || ||  | | ||||||| ||||||||||||    
T  33689015 tggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccgatattcccc 33688946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 37092625 - 37092670
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||||||  |||||||||| |||||||||||| |||||||||||    
T  37092625 tccttggaagaagctccttgccactggagcccaagcaacttggttt 37092670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 42412894 - 42412939
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| | |||||||||| |||||||||||    
T  42412894 tccttggaaggagctccttgccattggagcccaagcaacttggttt 42412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 49021205 - 49021274
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||| || |||| || ||||| ||| ||||  |||||||||||||||||||||| |||||    
T  49021205 ttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 50405612 - 50405689
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttcc 361  Q
    ||||||| || |||| || ||||||||| ||||  | ||| |||||||||||||||| |||||||||  |||||||||    
T  50405612 cggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcc 50405689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-29; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-29
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 42861219 - 42861382
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||| || || |||| || ||||| ||||||||  |||||||||||||||||||||| ||||| ||| ||||||||||   |||||||||| |    
T  42861219 ttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacc 42861318  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||      ||||||||||||||||||||| |||||||||||||||| |||||||    
T  42861319 cgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatttggttt 42861382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 1538537 - 1538375
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||||||||  |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  1538537 ttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 1538438  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     |||| |||| ||||||||||| |||||||||||||||||||||||    
T  1538437 cggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-23
Query Start/End: Original strand, 277 - 436
Target Start/End: Complemental strand, 20525944 - 20525780
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||||||| || ||||| ||| ||||  |||||||||||||||||||||| |||||  || ||||||| |  |||| ||| ||| |    
T  20525944 ttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacc 20525845  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    ||||||||||||     ||||||| || ||||||||||| |||||||||||| ||||||||||||    
T  20525844 cgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttggtttg 20525780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 277 - 436
Target Start/End: Original strand, 5731921 - 5732085
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||  ||| |||| |||||||| |||||||||||||| ||||| |||  |||||| |  |||| ||| ||| |    
T  5731921 ttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacc 5732020  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  5732021 cggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtttg 5732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 42086433 - 42086271
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| |||||||||  |||||| || |||| ||| ||| |    
T  42086433 ttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacc 42086334  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||| ||      ||||||||| ||||||||||| || ||||||||| ||||||||||    
T  42086333 cggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 28857192 - 28857071
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| ||| |||||||||      ||||||||| ||||||||||| ||    
T  28857192 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccac 28857093  T
Q  414 tggagcccaaacaacttggttt 435  Q
    |||||||||| |||||||||||    
T  28857092 tggagcccaagcaacttggttt 28857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 40117521 - 40117409
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  ||||||| |||||||  ||||||||  |||||||||||||||||||||| ||||| |||  |||||| || |||||||| ||||     
T  40117521 ttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatt 40117422  T
Q  377 cgatattccccga 389  Q
    |||||||||||||    
T  40117421 cgatattccccga 40117409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 19572788 - 19572668
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| ||||||| || |||| |||  || ||| |||||||||      ||||||||| ||||||||||| ||    
T  19572788 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccac 19572689  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||||| ||||||||||    
T  19572688 tggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 20682618 - 20682782
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  | ||||||||||||| ||||||||  ||||| |||||||||||||||| ||||| |||  |||||| || ||||||||  || |    
T  20682618 ttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaacc 20682717  T
Q  377 cgatattccccg-----atccttggaat-gagctccttgctactggagcccaaacaacttggttt 435  Q
    | ||||||||||      ||||| |||| ||||||||||  |||||||||||| |||||||||||    
T  20682718 caatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaacttggttt 20682782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 11845825 - 11845908
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||| |||| |||||| || || ||||| ||| ||||||||    
T  11845825 aaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatt 11845908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 12705120 - 12704957
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  || ||||||||||| ||||||  |||||||||  |||||| |  || | ||| ||| |    
T  12705120 ttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacc 12705021  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  12705020 cggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttt 12704957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 438
Target Start/End: Original strand, 41163461 - 41163626
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| | ||||| || |||| |||||||| ||| ||||   |||||||||||||| |||| | ||||| |||| |||||| || |||| ||| ||| |    
T  41163461 ttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttccc-ctgggaatcgaacc 41163559  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
    || |||||||||      | ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  41163560 cggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggtttgaa 41163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 13664366 - 13664257
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||  ||| |||||||  |||||||| ||||||||||||||||||||||| ||||| ||| ||||||| || |||  ||| |||||    
T  13664366 ttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatc 13664267  T
Q  377 cgatattccc 386  Q
    || |||||||    
T  13664266 cggtattccc 13664257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 431
Target Start/End: Original strand, 23247375 - 23247511
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    |||||||| ||| |||| |||||| |||||||||||||||  |||| ||||  |||||| |  |||| ||| ||| ||||||||||||       |||||    
T  23247375 aaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtcctt 23247474  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttg 431  Q
    ||||||||||||||||||||| || ||||||||||||    
T  23247475 ggaatgagctccttgctactgaagtccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 9812978 - 9812815
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  || ||||||||||| ||||||  ||||| |||  |||||| |  || | ||| ||| |    
T  9812978 ttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacc 9812879  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  9812878 cggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttt 9812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 15034177 - 15034070
Alignment:
Q  281 catcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgat 380  Q
    |||||||||| ||||||  |||||||| | | ||||  |||||||||||||||||||||  ||||  ||| ||||||||||  ||||||||||| ||| |    
T  15034177 catcggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggt 15034078  T
Q  381 attccccg 388  Q
    ||||||||    
T  15034077 attccccg 15034070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 18045744 - 18045682
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    |||||||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||||||    
T  18045744 ttcgcatcggtttccgatccactaaaggtggacgattaa-tcggctcatgtgtagaggcatgcg 18045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 26077216 - 26077085
Alignment:
Q  308 gcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgag 402  Q
    ||||||||| |||||| |||||||||||||| | ||||| |||  |||||| || |||| ||| ||| |   |||||||| |     |||||||||||||    
T  26077216 gcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgag 26077117  T
Q  403 ctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| | |||||||||||||||||||||||    
T  26077116 ctccttaccactggagcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8513625 - 8513463
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| |||| |||||| |||||||||||||| | ||||| |||   |||||||| || | ||| ||| |    
T  8513625 ttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacc 8513526  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| ||| ||| |||| ||||||||||    
T  8513525 cggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 37263346 - 37263185
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| |||||| ||||||||| ||| ||||  ||||| |||||||||||||||| | ||| |||  |||| |||| |||  ||| ||| |    
T  37263346 ttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttg-ttcccctgagaatcgaacc 37263248  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||      ||||| ||| || |||||||| |||||||||||| ||||||||||    
T  37263247 cgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 300 - 431
Target Start/End: Original strand, 7308388 - 7308524
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    ||||||| |||| ||||  |||||||||||||||||||| | ||||  |||  |||||| || |||| ||| ||| |||||||||| | |     |||||    
T  7308388 aaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtcctt 7308487  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttg 431  Q
    |||||||||||||||| ||| || |||||||||||||    
T  7308488 ggaatgagctccttgccactagaacccaaacaacttg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 14728069 - 14728025
Alignment:
Q  391 ccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  14728069 ccttggaatgagctcattgccactggagcccaaacaacttggttt 14728025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 23383636 - 23383592
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  23383636 tccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 434
Target Start/End: Original strand, 25417234 - 25417345
Alignment:
Q  327 cgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctactggagccc 421  Q
    |||||||||||||| ||||| |||  |||||| || |||| ||| ||| ||| ||||||||||     ||||||||| ||||||||||| ||||||||||    
T  25417234 cgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagccc 25417333  T
Q  422 aaacaacttggtt 434  Q
    ||| |||||||||    
T  25417334 aaa-aacttggtt 25417345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 434
Target Start/End: Original strand, 35561845 - 35561981
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttgga 397  Q
    |||| |||| |||| ||||||||| ||||||||||||| ||||||||  ||||||| || |||||| | |||  ||||||||||||      || |||||    
T  35561845 ggtgagcgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattgga 35561944  T
Q  398 atgagctccttgctactggagcccaaacaacttggtt 434  Q
    | |||||| |||| ||||||| |||| ||||||||||    
T  35561945 aggagctctttgccactggagtccaagcaacttggtt 35561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 39728470 - 39728330
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    ||||||| |||| ||||| | |||  ||||||||||||||  ||||| ||| |||||||||| |||  ||| ||| | | |||||||||      | |||    
T  39728470 aaaggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttctt 39728371  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  39728370 ggaaagagctccttgccactggagcccaaacaacttggttt 39728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 12766237 - 12766074
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| |||| ||| ||||||||||||||||||  ||||| |||   ||||| |  ||   ||| ||| |    
T  12766237 ttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacc 12766138  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  12766137 cggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttggttt 12766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 435
Target Start/End: Complemental strand, 30349661 - 30349522
Alignment:
Q  301 aaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttg 395  Q
    ||||||| ||| |||||  |||||||| |||||||||||| ||||| |||   ||||| || || |||||  || ||| |||||||||      ||||||    
T  30349661 aaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttg 30349562  T
Q  396 gaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||| || |||||||| ||||||||||||||||||||||||    
T  30349561 gaaggaactccttgccactggagcccaaacaacttggttt 30349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 2485185 - 2485139
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  2485185 tccttggaatgagctccttgccattggagtccaaacaacttggtttg 2485139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 38897728 - 38897829
Alignment:
Q  285 ggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattc 384  Q
    |||||| ||||||| |||||||||| | ||||  ||||| |||||||||||||||| ||||| |||  |||| |||| |||||||| ||| ||| |||||    
T  38897728 ggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttg-ttcccctggaaatcgaacccggtattc 38897826  T
Q  385 ccc 387  Q
    |||    
T  38897827 ccc 38897829  T

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Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 39099787 - 39099861
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| || |||| |||||||||||| ||||  |||||||||||||||||||| | ||||| ||| |||||||    
T  39099787 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtt 39099861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 18136402 - 18136443
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  18136402 ttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 38297082 - 38297131
Alignment:
Q  389 atccttggaatgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
    |||||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  38297082 atccttagaaggagctccttgccactggagcccaaacaatttggtttgaa 38297131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 4016374 - 4016418
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  4016374 tccttggaatgagcttcttgccactggagcccatacaacttggtt 4016418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 6767170 - 6767214
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  6767170 tccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 2585 - 2633
Target Start/End: Complemental strand, 15798971 - 15798923
Alignment:
Q  2585 atgctcttctcccaacaagatttgctcatttccaactaaactttcaaaa 2633  Q
    ||||||||||||||||| | |||||||||||||||| ||| ||||||||    
T  15798971 atgctcttctcccaacatgttttgctcatttccaaccaaattttcaaaa 15798923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 20705637 - 20705561
Alignment:
Q  309 cgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcc 385  Q
    |||||||| || || ||||||||||||||||| ||||  |||| ||||||  | ||| |||||||||||||||||||    
T  20705637 cgattaatctgccttatgcgtagaggcatgcgcactgaccaaacgttgttctccctgaaaattgaatccgatattcc 20705561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 24498971 - 24498927
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||    
T  24498971 tccttggaaggagctccttgctactagagcccaaacaactcggtt 24498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 28856965 - 28856921
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  28856965 tccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 35403631 - 35403675
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||    
T  35403631 tccttggaaggagctccttgccactggagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 2584 - 2635
Target Start/End: Original strand, 7963371 - 7963422
Alignment:
Q  2584 aatgctcttctcccaacaagatttgctcatttccaactaaactttcaaaaat 2635  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||| |||||||    
T  7963371 aatgctcttctctcaaaaagatttgctcacttccaaccaaacttacaaaaat 7963422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 9805110 - 9805003
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| | ||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| ||||| |||  |||||| || |||| ||| ||| |    
T  9805110 ttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacc 9805011  T
Q  377 cgatattc 384  Q
    || |||||    
T  9805010 cggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 14588641 - 14588728
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc 387  Q
    |||||||| ||| ||||  |||||||||||||||||||||| |||||||||  ||| || |  ||| |||| ||| ||||||||||||    
T  14588641 aaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattcccc 14588728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 14974343 - 14974406
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||| |||||||| ||| ||||  |||||||||||||||||||| | ||||| |||||||||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgtt 14974406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 16757484 - 16757421
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    |||||||||||||| || ||||||||| ||| |||||||||   || |||||||||||||||||    
T  16757484 ttcgcatcggtttctgacccactaaagatggacgattaattcaacttatgcgtagaggcatgcg 16757421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 24500096 - 24500143
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    ||||| ||||||||||||||  |||| |||||||||||||||||||||    
T  24500096 tccttagaatgagctccttgtcactgaagcccaaacaacttggtttga 24500143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 1826842 - 1826800
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||| |||||| ||||||||| |||||||||||||||||||    
T  1826842 ttggaaggagctcattgctactgaagcccaaacaacttggttt 1826800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 20255452 - 20255394
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||||| ||| ||||  | |||||||||||||||||||| ||||||||| |||||||    
T  20255452 aaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgtt 20255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 27648426 - 27648488
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgc 339  Q
    |||||||||||||| ||||||| |||| ||| ||| ||||  ||||||| |||||||||||||    
T  27648426 ttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatgc 27648488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 35245030 - 35245104
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaa 374  Q
    |||||||||| | ||||  |||||||||||||| ||||||  |||||||||| |||||| || ||| ||||||||    
T  35245030 aaaggtgggcaactaatcaggctcatgcgtagaagcatgcacactggtcaaacgttgttccctctgaaaattgaa 35245104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 427
Target Start/End: Original strand, 42292145 - 42292179
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaa 427  Q
    |||||||||||||||||| ||||||||||||||||    
T  42292145 ttggaatgagctccttgccactggagcccaaacaa 42292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 3654031 - 3654076
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||    
T  3654031 tccttggaaagagctcattgtcactggagcccaaacaacttggttt 3654076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 7866569 - 7866524
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  7866569 tccttggaaggagctccttgccactggagtccaagcaacttggttt 7866524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 21375413 - 21375376
Alignment:
Q  321 ctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  21375413 ctcatgcgtagaagcatgcgcactggtcaaatgttgtt 21375376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 2584 - 2633
Target Start/End: Original strand, 28717351 - 28717400
Alignment:
Q  2584 aatgctcttctcccaacaagatttgctcatttccaactaaactttcaaaa 2633  Q
    |||| ||||||||||||||| |||||||| | ||||| ||||||||||||    
T  28717351 aatgatcttctcccaacaagttttgctcactcccaaccaaactttcaaaa 28717400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-29; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-29
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8141211 - 8141049
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| ||| |||| ||| |||||  ||||||||||||||||||||| ||||| |||  ||||||||| |||||||| ||| |    
T  8141211 ttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacc 8141112  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     |||||||||  |||||||||| |||||||||||||||||||||||    
T  8141111 cggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 277 - 430
Target Start/End: Original strand, 33401801 - 33401958
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    ||||||||||||| | ||||||||||||||||||| ||||  | |||||||||||||||||||  ||||||||| ||||||| || ||| |||| ||| |    
T  33401801 ttcgcatcggttttg-atccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacc 33401899  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    || ||||||||||     |||||| || ||||||||||| |||||||||||||||||||    
T  33401900 cggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 304 - 434
Target Start/End: Original strand, 14666099 - 14666234
Alignment:
Q  304 gtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaa 398  Q
    |||||||| |||| |||||  |||||||||||||||| ||||| ||| |||||||||| |||| ||| ||| ||| |||||||||      |||||||||    
T  14666099 gtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaa 14666198  T
Q  399 tgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||||||| |||||||||||| ||||||||||    
T  14666199 tgagctccttgccactggagcccaagcaacttggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 45521277 - 45521116
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||  ||||||| |||| ||||  |||||||||||||||||||||| |||| |||| ||||||| || |||| ||| ||| |    
T  45521277 ttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttccc-ctgggaatcgaacc 45521179  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||     ||||||||||||| |||||||| |||||||||||| ||||||||||    
T  45521178 cggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 282 - 434
Target Start/End: Original strand, 1012983 - 1013140
Alignment:
Q  282 atcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgata 381  Q
    ||||||||  |||||||||||||||  ||||||||| |||||||||||||||||||| | ||||| |||  |||||| || |||| ||| ||| ||| ||    
T  1012983 atcggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggta 1013082  T
Q  382 ttccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||      |||||||||  |||||||||| |||||||||||| ||||||||||    
T  1013083 ttccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 3418514 - 3418677
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||| ||| |||| || |||||||||||| ||||||| ||||| ||| ||||||| |  ||  |||| ||| |    
T  3418514 ttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacc 3418613  T
Q  377 cgatattcccc-ga----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||| ||    ||||||||| ||||||||||| || |||| ||||||||||||||||    
T  3418614 cgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttggttt 3418677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 280 - 434
Target Start/End: Original strand, 9859999 - 9860159
Alignment:
Q  280 gcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccga 379  Q
    ||||||||||| ||||||| || ||||| ||| |||| ||||||||| ||||||||||||  ||||| ||| ||||||| || |||| ||| ||| |||     
T  9859999 gcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccgg 9860098  T
Q  380 tattcccc--ga----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||  ||    ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  9860099 tattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttggtt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 300 - 430
Target Start/End: Original strand, 35496279 - 35496413
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga----tccttg 395  Q
    |||||||||||||||||   |||| | |||||||||||||| ||||  ||| |||||||||| ||| |||||||| | |||||||| |||    ||||||    
T  35496279 aaaggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtttcctctgaaaattgaacctgatattcctcgatacgtccttg 35496378  T
Q  396 gaatgagctccttgctactggagcccaaacaactt 430  Q
     |||||||||||||| || ||||||||| ||||||    
T  35496379 aaatgagctccttgccaccggagcccaagcaactt 35496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 429
Target Start/End: Complemental strand, 43033010 - 43032853
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| || ||||||||||||| ||||| |||  |||||| || |||| ||| |||||    
T  43033010 ttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatc 43032911  T
Q  377 cgata-ttccccgatcc----ttggaatgagctccttgctactggagcccaaacaact 429  Q
    ||||| ||||| ||| |    |||||| || |||||||| ||||||||||||||||||    
T  43032910 cgatatttcccagatacatttttggaaggaactccttgccactggagcccaaacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 434
Target Start/End: Original strand, 44893305 - 44893441
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttgga 397  Q
    |||| |||||||||  ||||| |||||||||||||||  ||||| |||   ||||| || || ||||||||| ||| |||||||||      ||||||||    
T  44893305 ggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttgga 44893404  T
Q  398 atgagctccttgctactggagcccaaacaacttggtt 434  Q
    | ||||||||||| |||||||||||||||||||||||    
T  44893405 aggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 15884557 - 15884719
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||| ||| | ||| ||||| |||| |||| ||| ||| |    
T  15884557 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttg-ttcccctgggaatcgaacc 15884655  T
Q  377 cgatattcccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || ||||||||       ||||||||| ||||||||| | |||||||||||| |||||||||||    
T  15884656 cggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggttt 15884719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 438
Target Start/End: Complemental strand, 27976000 - 27975834
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||| | || ||||||||||||||||||||||  |||||| ||||||||||||||  |||| |||| ||||||| |  |||| ||| ||| |    
T  27976000 ttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaacc 27975901  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
    | ||||||| | |     ||  | ||| ||||||||| | ||| |||||||||||||||||||||||    
T  27975900 caatattcctcaaatatgtctctagaaagagctccttaccactagagcccaaacaacttggtttgaa 27975834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 438
Target Start/End: Complemental strand, 28033269 - 28033103
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||| | || ||||||||||||||||||||||  |||||| ||||||||||||||  |||| |||| ||||||| |  |||| ||| ||| |    
T  28033269 ttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaacc 28033170  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
    | ||||||| | |     ||  | ||| ||||||||| | ||| |||||||||||||||||||||||    
T  28033169 caatattcctcaaatatgtctctagaaagagctccttaccactagagcccaaacaacttggtttgaa 28033103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 435
Target Start/End: Original strand, 2467161 - 2467282
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    ||||||||| ||||| |||||| ||||| |||  |||||| || |||||||| ||| ||| |||||||||      ||||||||| ||||||||||| ||    
T  2467161 ggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccac 2467260  T
Q  414 tggagcccaaacaacttggttt 435  Q
    |||||||||| |||||||||||    
T  2467261 tggagcccaagcaacttggttt 2467282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 11298268 - 11298337
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||| || |||| ||||||| |||||||||||||||||||| |||||||||||| |||||    
T  11298268 ttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactgg 11298337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 34846805 - 34846761
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34846805 tccttggaatgagctccttgccactggagcccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 434
Target Start/End: Complemental strand, 11786017 - 11785864
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    ||||||| ||||||  |||| || ||||||||| ||||||||||||||||||||||  ||||  |||| ||||  ||| || | ||| ||||||| ||||    
T  11786017 cggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgttg-ctccccttggaatcgaatccggtatt 11785919  T
Q  384 ccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||      ||||||||||||||||||||| |||||||||||  ||||||||||    
T  11785918 ccccgggtacgtccttggaatgagctccttgc-actggagcccatgcaacttggtt 11785864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 17981550 - 17981387
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||  ||| |||| ||||| | ||||| | ||| |||||||||||||||  |||||||||  |||||| || |||| ||| ||| |    
T  17981550 ttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacc 17981451  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||| ||||     |||||||||| ||||||||||| |||||||||||| |||||| ||||    
T  17981450 cggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaacttagttt 17981387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 10927715 - 10927553
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || ||||||||||||  ||| ||||  |||||||||||||||||||||| ||||| |||  |||||| |  || | ||| ||| |    
T  10927715 ttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacc 10927616  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      |||||| ||  |||||||||| |||| ||||||| ||||||||||    
T  10927615 cggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 301 - 434
Target Start/End: Complemental strand, 18091485 - 18091348
Alignment:
Q  301 aaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttg 395  Q
    ||||||||||| ||||| | ||| |||||||||||||||| |||||||||| |||||||   |||  ||||||||  | |||| | ||      ||||||    
T  18091485 aaggtgggcgactaattcgcctcgtgcgtagaggcatgcgcactggtcaaacgttgttttt-ctgagaattgaatttggtatttcacgggtgcgtccttg 18091387  T
Q  396 gaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  18091386 gaataagctccttgccactggagcccaaacaacttggtt 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 38922455 - 38922577
Alignment:
Q  317 ttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgct 411  Q
    ||||||| |||||| ||||||||| ||||| |||  |||||| || |||| ||| ||| ||| |||||||||      ||||||||| |||||||||||     
T  38922455 ttggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgcc 38922554  T
Q  412 actggagcccaaacaacttggtt 434  Q
    |||||||||||| ||||||||||    
T  38922555 actggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 6940549 - 6940504
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  6940549 tccttggaatgagctccttaccactggagcccaaacaacttggttt 6940504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 583921 - 583761
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  |||||  |||||||||||| ||||  | |||||||||||||||||||| |||||||||  ||||||  | || | ||| ||| |    
T  583921 ttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcgaacc 583824  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||| | |||     |||||||||  |||||||||| ||| |||||||||||||||||||    
T  583823 cggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 43027414 - 43027252
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||  |||| ||| ||| ||||  |||||||||||||||||||||| | ||| |||  |||||| |  |||| ||| ||| |    
T  43027414 ttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacc 43027315  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |  |||||||| |     | |||| ||||||||| |||| |||||||||||||||||||||||    
T  43027314 cagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 3568005 - 3567932
Alignment:
Q  285 ggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| || |||| ||||||||  || |||||||||||||||||||||| ||| | ||||||||| |||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaagtgttgtt 3567932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 17845725 - 17845680
Alignment:
Q  389 atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  17845725 atccttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 18374077 - 18373956
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| |||||||||  ||||||  | |||  ||| ||| | | |||| ||||     ||| |||||||||||||||||| |     
T  18374077 ggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagctccttgccat 18373978  T
Q  414 tggagcccaaacaacttggttt 435  Q
    ||||||||||||||||| ||||    
T  18373977 tggagcccaaacaacttagttt 18373956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 10535522 - 10535566
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||    
T  10535522 tccttggaaggagctccttgccactggagtccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 22810071 - 22810027
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  22810071 tccttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 24938681 - 24938725
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||    
T  24938681 tccttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 4479297 - 4479403
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| ||||   ||||||||||||||||||||| ||||| |||  |||| |||| |||| ||| |||||    
T  4479297 ttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttg-ttcccctgggaatcgaatc 4479395  T
Q  377 cgatattc 384  Q
    || |||||    
T  4479396 cggtattc 4479403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 2587 - 2634
Target Start/End: Original strand, 9944470 - 9944517
Alignment:
Q  2587 gctcttctcccaacaagatttgctcatttccaactaaactttcaaaaa 2634  Q
    ||||||||| ||||||| |||||||||||||||| |||||||| ||||    
T  9944470 gctcttctctcaacaagttttgctcatttccaaccaaactttcgaaaa 9944517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 24837231 - 24837188
Alignment:
Q  392 cttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||    
T  24837231 cttggaaggagctccttgccactggagcccaagcaacttggttt 24837188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 33935864 - 33935898
Alignment:
Q  400 gagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||| |||||||||||||||||||||||    
T  33935864 gagctccttgcaactggagcccaaacaacttggtt 33935898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 36662513 - 36662444
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||||||||||| |||||| |||| |||| ||| ||||  || |||| |||||||||||||| |||||    
T  36662513 ttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactgg 36662444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-26; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 5253224 - 5253386
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||||||||  |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  5253224 ttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 5253323  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| | |||||||||| ||||||||||    
T  5253324 cggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-24
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 13036005 - 13036164
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||  |||| ||| |||| ||||||||||||||||||||||| ||||| ||| ||||||| || ||| |||| ||| |    
T  13036005 ttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacc 13036104  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    |||||||||||||     ||||||||| ||||||||||| |||||||||||| |||||||    
T  13036105 cgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8932770 - 8932608
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||  ||||||||| |||||||  |||||||||||||||||||||| ||| | ||| ||||||| || |||| ||| ||| |    
T  8932770 ttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacc 8932671  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||     |||||||||| || |||||||| |||||||  ||||||||||||||    
T  8932670 cgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8944236 - 8944074
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||  ||||||||| |||||||  |||||||||||||||||||||| ||| | ||| ||||||| || |||| ||| ||| |    
T  8944236 ttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacc 8944137  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||     |||||||||| || |||||||| |||||||  ||||||||||||||    
T  8944136 cgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 287 - 435
Target Start/End: Original strand, 9179747 - 9179900
Alignment:
Q  287 tttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccc 386  Q
    |||| ||||||| |||||||| ||| ||||   ||||||||||||||| ||||  ||||||||| ||||||| || |||| ||| ||| ||| |||||||    
T  9179747 tttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccc 9179846  T
Q  387 cga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
     |      ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9179847 tgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggttt 9179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-20
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 14107359 - 14107522
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||||||   ||||||| ||||  |||||||||||||||||||| | |||||||||  |||||| |  |||| ||| ||| |    
T  14107359 ttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacc 14107458  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || ||||||||||     || |||||| ||||||||||| ||||||||||||||||||||||||    
T  14107459 cggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggttt 14107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 21898757 - 21898595
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||  ||| ||||  |||||||||||||||||||||| ||||| |||  |||||| |  |||| ||| ||| |    
T  21898757 ttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacc 21898658  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  21898657 cggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 8611975 - 8612138
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  || ||||||||||| ||||||  |||||||||  |||||| |  || | ||| ||| |    
T  8611975 ttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacc 8612074  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  8612075 cggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttt 8612138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 29333163 - 29333301
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atcctt 394  Q
    |||||||| ||| | ||| |||||||||||||||||||||| ||||| |||| |||| |||| |||||||| ||| ||| ||||||| |      |||||    
T  29333163 aaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttg-ttcccctggaaatcgaacccggtattccctgggtacgtcctt 29333261  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||| |||||| |||| ||| |||||||||||||||||||    
T  29333262 ggaaggagctcattgccactagagcccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 9147368 - 9147251
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    |||| ||||||||||||||| | ||||||||| ||| ||| || |||| ||| ||| ||||||||||||       ||||||||||||||||||| | ||    
T  9147368 ggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccac 9147269  T
Q  414 tggagcccaaacaacttg 431  Q
    ||||||||||||||||||    
T  9147268 tggagcccaaacaacttg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 3030737 - 3030781
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  3030737 tccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 12606516 - 12606428
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg 388  Q
    |||||||||||| ||||  ||||| |||||||||||||||| ||||| |||| |||||| || |||||||| ||||| | |||||||||    
T  12606516 aaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccg 12606428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8938820 - 8938658
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||  |||||||| ||| ||||| |||||||||||||| || |||| ||||||||| ||||||| |  |||| ||| ||| |    
T  8938820 ttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaacc 8938721  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
       |||||||||      || |||||| ||||||||||  |||||||||||||||||||||||    
T  8938720 aagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 15643947 - 15643992
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  15643947 tccttggaatgagctccttgccactggagcccaagcaacttggttt 15643992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 30410554 - 30410473
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||||||||||| || |||| |||| || |||||||||   ||||||||||||||||||||| |||||| || |||||||    
T  30410554 ttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgtt 30410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 11142668 - 11142624
Alignment:
Q  321 ctcatgcgtagaggcatgcggactggtcaaatgttgtttccactg 365  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  11142668 ctcatgcgtagaggcatgcgcactggtcaaacgttgtttccactg 11142624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 19230676 - 19230720
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  19230676 tccttggaaggagctccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 19089607 - 19089445
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||| | ||| ||||  ||||| |||||||||||||||  ||||| ||| ||||||| || |||| |||  || |    
T  19089607 ttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacc 19089508  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
     | |||||| ||      |||||| |||||||||||||| |||||||||||| ||||||||||    
T  19089507 tggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 24671915 - 24672030
Alignment:
Q  325 tgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc-gat----ccttggaatgagctccttgctactggagc 419  Q
    |||||||||||||||  ||||||||| ||||||| || |||| ||| ||| ||| ||||| || |||    ||||| || ||||||||||| ||||||||    
T  24671915 tgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagc 24672014  T
Q  420 ccaaacaacttggttt 435  Q
    |||| |||||||||||    
T  24672015 ccaagcaacttggttt 24672030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 430
Target Start/End: Original strand, 30788854 - 30789010
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| ||| |||||||||||| ||||| |||| |||| ||||| ||  |||  || |    
T  30788854 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttg-ttcca-tgagaatcaaacc 30788951  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    ||||||||||||     |||||||||| ||||||||||| ||||| | |||| ||||||    
T  30788952 cgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaactt 30789010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 32157175 - 32157249
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| ||||||| |||| |||  || |||| ||||||||||||||||| ||||| ||||||||| |||||||    
T  32157175 cggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgtt 32157249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 2271420 - 2271465
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  2271420 tccttggaaggagctccttgccactggagcccaagcaacttggttt 2271465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 9633626 - 9633695
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||| |||||    
T  9633626 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 9633695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 10311590 - 10311635
Alignment:
Q  392 cttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||    
T  10311590 cttggaaggagctccttgctactggagcccaagcaacatggtttga 10311635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 2584 - 2635
Target Start/End: Original strand, 864330 - 864381
Alignment:
Q  2584 aatgctcttctcccaacaagatttgctcatttccaactaaactttcaaaaat 2635  Q
    ||||||||||||||||||||||||| ||| | ||||  ||||||||||||||    
T  864330 aatgctcttctcccaacaagatttgttcactcccaatcaaactttcaaaaat 864381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 5759619 - 5759574
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||| ||||||| |||||||||||| |||||||||||    
T  5759619 tccttggaaggagttccttgccactggagcccaagcaacttggttt 5759574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 8149798 - 8149879
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| |||||||  | |||| |||||||| ||| ||||| |||| ||||||||||||||| | | ||||||||| |||||    
T  8149798 ttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgtt 8149879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 34954620 - 34954701
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| |||||| || |||  |||||||| ||| |||| ||||||||||||||||| ||| | ||||| |||| ||||||    
T  34954620 ttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgtt 34954701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-26; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 53599170 - 53599008
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| |||||||||||||||  ||||||||  |||||||||||||||||||||| ||||| |||| |||||| |  |||| ||| ||| |    
T  53599170 ttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacc 53599071  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| | |||||||||||||||||||||    
T  53599070 cggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 24166560 - 24166398
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||||||  ||||||||| || |||| |||||| |||||||||||||||| ||||| |||| |||||||||  ||| ||| ||| |    
T  24166560 ttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacc 24166461  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |  ||||||||||     ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  24166460 cagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 38075543 - 38075381
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||||||| | ||||||| |||||||||||||||||||||| ||||| |||  ||||||||| |||  ||| ||| |    
T  38075543 ttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacc 38075444  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||| ||||     ||||||||| || ||||||||  ||||||||||||||||||||||    
T  38075443 cggtattctccgaatacgtccttggaaggaactccttgccgctggagcccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 55921144 - 55920981
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||||||| |||||||||  ||||||| |||||||||||||| ||||  ||| ||||||| || |||| ||| ||| |    
T  55921144 ttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacc 55921045  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  55921044 cggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 29895897 - 29895735
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  29895897 ttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 29895798  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  29895797 cggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 52950192 - 52950030
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||||||| ||| |||| ||| ||||| |||||| |||||| ||||| |||  |||||| || |||| ||| ||| |    
T  52950192 ttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacc 52950093  T
Q  377 cgatattcccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||||||       ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  52950092 cgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 1446894 - 1446774
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| ||| |||||||||      ||||||||| ||||||||||| ||    
T  1446894 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccac 1446795  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||||| ||||||||||    
T  1446794 tggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 10541125 - 10541018
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||||||  |||||||| |||||||| |||||| |||||||||||||||  ||||| |||  ||||||||| |||||||| ||| |    
T  10541125 ttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacc 10541027  T
Q  377 cgatattcc 385  Q
    |||||||||    
T  10541026 cgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 2559417 - 2559254
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| ||||  ||||  |||||||||||||||| ||||| |||  |||||| |  || ||||| |||||    
T  2559417 ttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatc 2559318  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || ||||||||       ||||||||| |||||| |||| ||||||||||||||||||||||||    
T  2559317 cggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggttt 2559254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 38166137 - 38165974
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| ||||||||| |||||| ||||| |||  |||||| || |||| |||  || |    
T  38166137 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacc 38166038  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |  |||||||||      ||||||||| ||||||||||| | ||||||||||||||||||||||    
T  38166037 cagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggttt 38165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 6779321 - 6779159
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||| ||| ||| ||| |||||||| ||| ||||  ||||||||| |||||||||||| ||||| ||  ||||||| || |||| ||| ||| |    
T  6779321 ttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacc 6779222  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||| ||       |||||||||  |||||||||| |||||||||||||||||||||||    
T  6779221 cggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaacttggtt 6779159  T

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Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 435
Target Start/End: Original strand, 5472867 - 5473012
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga----- 389  Q
    |||| |||||||||||| ||||  ||||| |||||||||||||||| ||||| |||  ||||||||| |||  |||  || | | |||||||||          
T  5472867 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacg 5472966  T
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||    
T  5472967 tccttgaaatgagctccttgccactggagcccaaacaacttagttt 5473012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 31588796 - 31588632
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtca--aatgttgtttccactggaaattgaa 374  Q
    |||||||||||||| ||||||| ||| ||| |||| ||||  ||||||||||||||| |||||| ||||| ||  |  ||||||||| |||| |||  ||    
T  31588796 ttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaa 31588697  T
Q  375 tccgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
     || |||||||||||     ||||| ||| ||||||||||  |||| ||||||||||||||||||    
T  31588696 cccaatattccccgaatacgtccttagaacgagctccttgacactgaagcccaaacaacttggtt 31588632  T

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Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 364
Target Start/End: Original strand, 7246647 - 7246734
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccact 364  Q
    |||||| ||||||| || |||| |||||||||||| ||||  |||||||||||||||||||||| ||||| |||  |||||| |||||    
T  7246647 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccact 7246734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 24850628 - 24850770
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| |||||| ||| |||||  || ||||   ||||||||||||||||||||| ||||||||| ||||| |||| |||  |||||||||    
T  24850628 ttcgcatcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaagtgttg-ttcccctgataattgaatc 24850726  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactg 415  Q
     | |||| ||||      ||||||||||||||||||||| ||||    
T  24850727 tggtatttcccggatacgtccttggaatgagctccttgccactg 24850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 410
Target Start/End: Original strand, 36145216 - 36145354
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||| ||  |||||||| ||| ||||  |||||||| ||||||||||||| |||| ||||  ||||||||| |||| ||| ||| |    
T  36145216 ttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacc 36145315  T
Q  377 cgatattccccg-----atccttggaatgagctccttgc 410  Q
    || |||||||||      |||||||||||||||||||||    
T  36145316 cggtattccccgggtacgtccttggaatgagctccttgc 36145354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 14567243 - 14567198
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  14567243 tccttggaatgagctccttgccactggagcccaagcaacttggttt 14567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 20421851 - 20421790
Alignment:
Q  309 cgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaat 370  Q
    |||||||| ||||||||||||||||||||||| ||||| ||| ||||||| || ||||||||    
T  20421851 cgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaat 20421790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 435
Target Start/End: Original strand, 1940779 - 1940938
Alignment:
Q  278 tcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatcc 377  Q
    ||||| ||||||  || |||| |||||||||||| ||||  ||||| |||||||||||||||| ||    |||  |||||| || |||| ||| ||| ||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc---caagcgttgttccccctgggaatcgaaccc 1940875  T
Q  378 gatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||| ||||      ||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  1940876 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggttt 1940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 30317339 - 30317231
Alignment:
Q  281 catcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgat 380  Q
    |||||||||| || |||| |||||||||||| ||||| ||||| ||||||||||||| || ||||| |||  |||||| || |||  ||| ||| | |||    
T  30317339 catcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacctgat 30317240  T
Q  381 attccccga 389  Q
    |||||||||    
T  30317239 attccccga 30317231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 287 - 434
Target Start/End: Original strand, 20532420 - 20532572
Alignment:
Q  287 tttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccc 386  Q
    |||| ||||||| |||||||||||| | ||  |||||||||||||||||||||| ||||| |||  |||||| |  |||||||| |||  || ||||| |    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctc 20532519  T
Q  387 cg---at--ccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||   ||  ||||||||||||| |||||| ||||||| |||| ||| ||||||    
T  20532520 cgggtatggccttggaatgagcaccttgccactggagtccaagcaatttggtt 20532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 3574565 - 3574611
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  3574565 tccttggaaggagctccttgccactggagcccaagcaacttggtttg 3574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 434
Target Start/End: Original strand, 12703550 - 12703708
Alignment:
Q  281 catcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgat 380  Q
    |||||||||| |||||  ||||| ||||||| ||||  |||| |||||||||| ||| |  |||||||||  |||||| ||||||||||| |||  |  |    
T  12703550 catcggtttccgatcctttaaagatgggcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaactcagt 12703649  T
Q  381 attccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||| |||     ||||| ||| || |||||||| |||||||||||| ||||||||||    
T  12703650 attcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttggtt 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 40272379 - 40272489
Alignment:
Q  324 atgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctactggag 418  Q
    ||||||||||||||||| ||||| |||  |||||| ||  ||||||| ||| |||||||||||||     ||| |||||| ||||||||| | || ||||    
T  40272379 atgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggag 40272478  T
Q  419 cccaaacaact 429  Q
    |||||||||||    
T  40272479 cccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 46108798 - 46108720
Alignment:
Q  280 gcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||||||| || |||  ||| |||| ||| |||| ||||||||||||||||||||||| ||| | |||||||||||    
T  46108798 gcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgtt 46108720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 8424664 - 8424583
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||||| |||  || |||| |||| || |||||||||||||||| ||| |||||||||||| ||||| |||| ||||||    
T  8424664 ttcgcatcgattttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgttgtt 8424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 19651564 - 19651608
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  19651564 tccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 34667721 - 34667765
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  34667721 tccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 40780862 - 40780930
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactg 345  Q
    |||||| ||||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| ||||    
T  40780862 ttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg 40780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 41339514 - 41339558
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  41339514 tccttggaaggagctccttgccactagagcccaaacaacttggtt 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 43458605 - 43458561
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||    
T  43458605 tccttggaatgagcttcttgccactggagcccaagcaacttggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 50486050 - 50485990
Alignment:
Q  280 gcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    ||||||||||| || ||||||| ||||||||| ||||  ||||| ||||||||||||||||    
T  50486050 gcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcg 50485990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 16450410 - 16450303
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || | || |||||||| ||| |||| ||||||||||||||||||||| | ||||| |||  |||||| || |||| ||| ||| |    
T  16450410 ttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacc 16450311  T
Q  377 cgatattc 384  Q
    | ||||||    
T  16450310 caatattc 16450303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 42722578 - 42722689
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  || ||||||||||||  ||| ||||  |||||||||||||||||||||| ||||| |||  |||||| |  |||| ||||||| |    
T  42722578 ttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacc 42722677  T
Q  377 cgatattccccg 388  Q
    || |||| ||||    
T  42722678 cggtatttcccg 42722689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 430
Target Start/End: Complemental strand, 14859293 - 14859263
Alignment:
Q  400 gagctccttgctactggagcccaaacaactt 430  Q
    |||||||||||||||||||||||||||||||    
T  14859293 gagctccttgctactggagcccaaacaactt 14859263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 385
Target Start/End: Complemental strand, 21429413 - 21429303
Alignment:
Q  275 cattcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaa 374  Q
    |||||||| ||||||| || |||| |||||||| ||| || | || ||| |||||||||||||||| |||||  ||| |||||| || ||  |||| |||    
T  21429413 cattcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaa 21429314  T
Q  375 tccgatattcc 385  Q
     ||||||||||    
T  21429313 cccgatattcc 21429303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 26479982 - 26480028
Alignment:
Q  309 cgattaatttggctcatgcgtagaggcatgcggactggtcaaatgtt 355  Q
    ||||||||| |||||||||||||||||||||| ||||| ||| ||||    
T  26479982 cgattaattcggctcatgcgtagaggcatgcgtactggccaagtgtt 26480028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 26480070 - 26480112
Alignment:
Q  392 cttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  26480070 cttggaaggagctccttgccagtggagcccaaacaacttggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 29588725 - 29588687
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  29588725 ttggaatgagctccttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 48317397 - 48317439
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  48317397 ttggaatgagctctttgccactggagcccaagcaacttggttt 48317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 275 - 388
Target Start/End: Original strand, 295532 - 295644
Alignment:
Q  275 cattcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaa 374  Q
    |||||||| |||||||  | |||| || ||||| ||| |||| ||| || |||||||||||||||| ||||| |||| |||| |||| |||| ||| |||    
T  295532 cattcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttg-ttcctctgggaatcgaa 295630  T
Q  375 tccgatattccccg 388  Q
    || | |||||||||    
T  295631 tctggtattccccg 295644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 4738728 - 4738659
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||| || |||| |||||||| ||| |||||  |||||||||||||| |||||| |||||    
T  4738728 ttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactgg 4738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 6032759 - 6032800
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    ||||||||| ||||||||||| |||||||||||| |||||||    
T  6032759 tccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 12887321 - 12887366
Alignment:
Q  389 atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| |||||| ||| |||| |||||||||||||||||||||||    
T  12887321 atccttagaatgatctctttgccactggagcccaaacaacttggtt 12887366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 13073530 - 13073485
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| |||||| |||| ||| ||||||||||||||||||||    
T  13073530 tccttggaaggagctcattgccactagagcccaaacaacttggttt 13073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 17080153 - 17080084
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||  ||||||  ||||||| |||| ||||  |||||||||||||||||||||| |||||    
T  17080153 ttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactgg 17080084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 27531776 - 27531821
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  27531776 tccttggaaggagctccttgccactggagtccaagcaacttggttt 27531821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 54946352 - 54946291
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactg 345  Q
    ||||||| || |||| || | ||||||| ||||  |||||||||||||||||||||||||||    
T  54946352 cggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactg 54946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 277 - 436
Target Start/End: Original strand, 43959823 - 43959987
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| |||||||||||||||||||| ||||  ||||| |||||||||||||||| ||||| |||  |||||| || |||| ||||||| |    
T  43959823 ttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacc 43959922  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    ||||||||||||      || |||||| |||| |||||| |||||||||||| |||||| |||||    
T  43959923 cgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaacttagtttg 43959987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 5855628 - 5855466
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || ||||||||||||  ||| ||||  | |||||||||||||||||||| ||||| |||  |||||| |  |||| ||| ||| |    
T  5855628 ttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacc 5855529  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     ||||||||| ||||||||||| |||||||||||||||||||||||    
T  5855528 cggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 430
Target Start/End: Original strand, 32150924 - 32151082
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||  || |||  ||||||| |||| ||||| |||||||||||| ||||||||| ||||  ||||||||||| || |||||||| ||| |    
T  32150924 ttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacc 32151023  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaactt 430  Q
     |||||||| |||     ||||||||| ||||||||||| |||||||||||||||||||    
T  32151024 tgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 277 - 445
Target Start/End: Complemental strand, 8764097 - 8763924
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||  ||||| |||||||||||||||| ||||| ||| ||||||| || |||| ||  ||| |    
T  8764097 ttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacc 8763998  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtttgaacctattt 445  Q
    ||||||||||||      ||||||||| ||||||||||| || ||||||||| ||||||||||||| |||||||    
T  8763997 cgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggtttgaccctattt 8763924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-20
Query Start/End: Original strand, 277 - 384
Target Start/End: Original strand, 18649354 - 18649461
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||| | |||||||||||||| |||||||||  |||||| || ||| |||| ||| |    
T  18649354 ttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacc 18649453  T
Q  377 cgatattc 384  Q
    ||||||||    
T  18649454 cgatattc 18649461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 49078178 - 49078057
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| |||| ||| ||| ||| |||||||||      ||||| ||| ||||||||||| ||    
T  49078178 ggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccac 49078079  T
Q  414 tggagcccaaacaacttggttt 435  Q
    |||||||||| |||||||||||    
T  49078078 tggagcccaagcaacttggttt 49078057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 48798114 - 48798234
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||| |||||  |||||| || |||||||| ||| |||||||||||||      || |||||| ||||||||||| ||    
T  48798114 ggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctccttgccac 48798213  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||| ||||||||||||    
T  48798214 tggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 280 - 434
Target Start/End: Complemental strand, 10336619 - 10336460
Alignment:
Q  280 gcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccga 379  Q
    ||||||||||  ||||||  |||||||| ||||||||  |||||||||||||||||||||| |||||||||  |||||| || ||| |||| ||| ||||    
T  10336619 gcatcggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccga 10336520  T
Q  380 tattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||| |||      || |||||| ||||||||||| |||||| |||| | |||||||||    
T  10336519 tattctccggatacgtctttggaaggagctccttgccactggaacccagataacttggtt 10336460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 10422871 - 10422732
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    |||||||| ||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| |  || ||||| ||| ||| ||||||||||     || ||    
T  10422871 aaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcatt 10422772  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||| ||||||||||| |||| ||||||||||||||||||    
T  10422771 ggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 10172973 - 10173132
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  |||||||||||||||||||| | ||||| |||  ||||||     ||| |||||||||    
T  10172973 ttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaatc 10173072  T
Q  377 cgatattcccc-ga----tccttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    || |||||||| ||    ||||||||| |||| |||||| ||||||||||||||||||||    
T  10173073 cggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 277 - 433
Target Start/End: Original strand, 41663858 - 41664019
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||   ||||||||||||||||||||| ||||  ||| ||||||| || |||| ||| ||| |    
T  41663858 ttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacc 41663957  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggt 433  Q
    || |||||||||      ||||| ||| ||||||||||| ||||||||||||||||||||||    
T  41663958 cggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 26660243 - 26660132
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| |||| |||||||||||| ||  ||||||| ||| |    
T  26660243 ttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacc 26660145  T
Q  377 cgatattccccga 389  Q
    || ||||||||||    
T  26660144 cggtattccccga 26660132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 277 - 430
Target Start/End: Original strand, 32142848 - 32143005
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||  ||||||| |||| ||||| |||||||||||| ||||||||| ||||| ||| ||||||| || ||| |||| ||| |    
T  32142848 ttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacc 32142947  T
Q  377 cgatattccccg----atccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    || ||||||  |     |||||||||||||||| |||| |||| || |||||||||||    
T  32142948 cggtattccagggtacgtccttggaatgagctctttgccactgaagtccaaacaactt 32143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 26325918 - 26325755
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||  |||||||||||||||||||||| ||||  ||| ||||||| || |||| ||| ||| |    
T  26325918 ttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacc 26325819  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||      |||||| || ||||||||||| |||||||||| | |||||||||||    
T  26325818 cgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggttt 26325755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 50503363 - 50503474
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |  |||||||||  |||  ||||| |||||||||||||||| ||||||||| ||||||| || |||| ||| ||| |    
T  50503363 ttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacc 50503462  T
Q  377 cgatattccccg 388  Q
    ||||||||||||    
T  50503463 cgatattccccg 50503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 430
Target Start/End: Original strand, 9659181 - 9659338
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  | |||| |||||||| ||| ||||  |||||||||||| ||||||||| ||| |||||| |||| |||| |||| ||| ||| |    
T  9659181 ttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttg-ttcccctgggaatcgaacc 9659279  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    || ||||||||||     ||||| ||||||||||||||| ||||||||| || ||||||    
T  9659280 cggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagcaactt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 435
Target Start/End: Original strand, 9853297 - 9853441
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----a 389  Q
    |||| |||||||| |||||||| ||| || || ||||||||||||| |||||| ||| ||||||||| || | ||| ||| ||| ||||  |||     |    
T  9853297 ccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtaca 9853396  T
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||    
T  9853397 tccttggaaggagctccttgccactggagccc-aacaacttggttt 9853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 33004059 - 33004179
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    ||||| |||||||||||||||| ||||| |||   |||||||| |||||||| |||||||||||||||||      ||||||||| ||||||||    ||    
T  33004059 ggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagctcctcatcac 33004158  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||||| ||||||||||    
T  33004159 tggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 31734368 - 31734237
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttgga 397  Q
    ||||| ||||||||||||||| | |||||||||||||| ||||| |||  ||||||||| || | ||| ||||||  |||||| ||     |||||||||    
T  31734368 ggtggacgattaatttggctcgtacgtagaggcatgcgcactggccaatcgttgtttcccctag-aatcgaatccagtattcctcgggtacatccttgga 31734270  T
Q  398 atgagctccttgctactggagcccaaacaactt 430  Q
    | | |||||||||||||| ||||||| ||||||    
T  31734269 aggtgctccttgctactgaagcccaagcaactt 31734237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 33418238 - 33418282
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||    
T  33418238 ttggaaggagctccttgccactggagcccaaacaacttggtttga 33418282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 40288521 - 40288641
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    ||||| || ||||||||||||  ||||| |||  |||||| || |||||||| ||| ||| ||||||||||     ||||||||| ||||||||||| ||    
T  40288521 ggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccac 40288620  T
Q  414 tggagcccaaacaacttggtt 434  Q
    | |||||||| ||||||||||    
T  40288621 tcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 12036756 - 12036815
Alignment:
Q  287 tttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||| ||||||| |||||||| |||||||| |||||| |||||||||||||||| |||||    
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactgg 12036815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 17642006 - 17642169
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| | ||||| || |||| |||||||| ||| ||||  ||||| |||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  17642006 ttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 17642105  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |  |||| || |      ||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  17642106 cagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggttt 17642169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 389 - 436
Target Start/End: Complemental strand, 31152705 - 31152658
Alignment:
Q  389 atccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  31152705 atccttggaaagagctccttgccactagagcccaaacaacttggtttg 31152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 11397891 - 11398052
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| || |||| || |||| |||||||| ||| ||||  | ||||||||||||||||| || | ||| |||| |||||| || || | ||| ||| |    
T  11397891 ttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttccc-ctcggaatcgaacc 11397989  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||| |||     |||||||||| ||||||||||| |||||||||||| ||||||||||    
T  11397990 cggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 42710144 - 42710246
Alignment:
Q  281 catcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgat 380  Q
    |||||||||| |||| || || ||||| ||| ||||| || | ||||||||||||||||| ||||| ||| | |||||||| ||| |||| ||| |||||    
T  42710144 catcggtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgat 42710243  T
Q  381 att 383  Q
    |||    
T  42710244 att 42710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 12744525 - 12744633
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||| ||||| || |||| ||  ||| |||| ||||| ||||||||||||||| |||||| ||| |||||  |||||| || ||| |||| |||||    
T  12744525 ttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatc 12744624  T
Q  377 cgatattcc 385  Q
     ||||||||    
T  12744625 tgatattcc 12744633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 12755515 - 12755623
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||| ||||| || |||| ||  ||| |||| ||||| ||||||||||||||| |||||| ||| |||||  |||||| || ||| |||| |||||    
T  12755515 ttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatc 12755614  T
Q  377 cgatattcc 385  Q
     ||||||||    
T  12755615 tgatattcc 12755623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 14254293 - 14254433
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    |||||||| ||| ||||  |||||||||||| ||||||||| ||||| |||  |||||| || ||| |||| |||  || ||||||||||     |||||    
T  14254293 aaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtcctt 14254392  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||||| |||||||  |||||| | || |||||||||||    
T  14254393 ggaatgagttccttgcccctggaggctaagcaacttggttt 14254433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 2579 - 2635
Target Start/End: Original strand, 15470879 - 15470935
Alignment:
Q  2579 agaagaatgctcttctcccaacaagatttgctcatttccaactaaactttcaaaaat 2635  Q
    |||| |||||||||||||||||||| |||||| ||| ||||| |||||||| |||||    
T  15470879 agaaaaatgctcttctcccaacaagttttgcttattcccaaccaaactttcgaaaat 15470935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 31576667 - 31576711
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  31576667 tccttagaatgagctccttgccactagagcccaaacaacttggtt 31576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 12036864 - 12036911
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    ||||||||| ||||| ||||| || |||||||||||||||||||||||    
T  12036864 tccttggaaggagcttcttgccaccggagcccaaacaacttggtttga 12036911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 28324624 - 28324691
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccc 386  Q
    |||||||||||||||||||||| ||||  ||| |||||||||| | || ||| ||| |||||||||||    
T  28324624 ggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccc 28324691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 14357813 - 14357755
Alignment:
Q  325 tgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    |||||||||||||||| |||||||||| |||||||| | ||||||| ||| | ||||||    
T  14357813 tgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaacctgatatt 14357755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 15238226 - 15238272
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttg 436  Q
    ||||||||| ||||||||||| | |||||||||| ||||||||||||    
T  15238226 tccttggaaggagctccttgccattggagcccaagcaacttggtttg 15238272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 34878055 - 34877933
Alignment:
Q  318 tggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgcta 412  Q
    |||||| || ||||||||||||| ||||| ||| ||||||| |  || | ||| ||| | | ||||||||||     ||||||||| | ||||||||| |    
T  34878055 tggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgcca 34877956  T
Q  413 ctggagcccaaacaacttggttt 435  Q
    ||| |||||||||||||||||||    
T  34877955 ctgaagcccaaacaacttggttt 34877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 2586 - 2628
Target Start/End: Original strand, 38041128 - 38041170
Alignment:
Q  2586 tgctcttctcccaacaagatttgctcatttccaactaaacttt 2628  Q
    |||||||||||||||| | |||||||||||||||| |||||||    
T  38041128 tgctcttctcccaacacgttttgctcatttccaaccaaacttt 38041170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 50095003 - 50094929
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    ||||||| || ||||||| ||||| ||| ||||  | |||||||||||| ||||||| |||||||||| ||||||    
T  50095003 cggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgtt 50094929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 16956564 - 16956491
Alignment:
Q  285 ggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| || |||| ||||||| | || ||||  ||||| |||||||||||||||| |||||||||| ||||||    
T  16956564 ggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 16956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 19195430 - 19195389
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttc 360  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  19195430 ggctcatgcgtagaggcatgcgcactggccaaacgttgtttc 19195389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 34719882 - 34719809
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaa 350  Q
    |||||| | ||||| || |||| ||||||| |||| |||| || ||| |||||||||||||||| |||||||||    
T  34719882 ttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaa 34719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 41743261 - 41743216
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| || ||||||||| |||||||||||    
T  41743261 tccttggaaggagctccttgccaccggagcccaagcaacttggttt 41743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 2586 - 2635
Target Start/End: Complemental strand, 50272639 - 50272590
Alignment:
Q  2586 tgctcttctcccaacaagatttgctcatttccaactaaactttcaaaaat 2635  Q
    |||||||||||||||||  |||||||  |||||||| |||||||||||||    
T  50272639 tgctcttctcccaacaatttttgctcccttccaactgaactttcaaaaat 50272590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-24; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 12864329 - 12864167
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| |||| ||||||||||| ||||||||||| ||||  ||| ||||||| || |||||||| |||||    
T  12864329 ttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatc 12864230  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     || |||||| ||||||||||  |||||||||||||||||||||||    
T  12864229 cggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 18902531 - 18902693
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| |||| |||||| ||||||||| || ||| |||||||||  |||||| ||  ||| ||| ||| |    
T  18902531 ttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacc 18902630  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  18902631 cggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-20
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 33005856 - 33005694
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||||||||||| ||||||||| || |||||||||||||||||||| ||||| ||| ||||| |||| |||| ||  ||| |    
T  33005856 ttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttg-ttcccctgggaacagaacc 33005758  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||| ||      |||| | |||||||||||||| |||||||||||| ||| |||||||    
T  33005757 cggtattccacgggtacgtcctagaaatgagctccttgccactggagcccaagcaatttggttt 33005694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 3811692 - 3811854
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||||||||||| ||||  |||||||||||||||||||||| | ||  ||| ||||||| || |||| ||| ||| |    
T  3811692 ttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacc 3811791  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| |||     ||||||||| ||| ||||||| | || || |||||||||||||||    
T  3811792 cgatattcctcgagtacgtccttggaaggagttccttgccattgaagaccaaacaacttggtt 3811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 8410236 - 8410074
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || || | ||| |||||||| ||||  ||||| |||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  8410236 ttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 8410137  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||| |||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  8410136 cgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 38005507 - 38005345
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| | ||||| ||||||| |||||||||||| ||||  |||||||| ||||||||||||| ||||| |||  |||||| ||  ||| ||| ||| |    
T  38005507 ttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacc 38005408  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |  |||||||||      ||||||||| ||||||||||| |||||||||||||||||||||||    
T  38005407 cagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 295 - 434
Target Start/End: Complemental strand, 331588 - 331444
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----a 389  Q
    |||| |||||||||||| ||||  |||||||||||||| ||||||| ||||| ||| ||||||| || |||| ||| ||| ||| |||||||||          
T  331588 ccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacg 331489  T
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||    
T  331488 tccttggaaagagctcattgccactggagcccaagcaacttggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 6358194 - 6358314
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatgagctccttgctac 413  Q
    |||||||||||||||||||||| ||||| ||| ||||||| || |||||||| ||||| | |||||||||      ||||| ||||||||| ||||| ||    
T  6358194 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttcttgccac 6358293  T
Q  414 tggagcccaaacaacttggtt 434  Q
    |||||||||||||||| ||||    
T  6358294 tggagcccaaacaactcggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 7747379 - 7747217
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||  ||| ||||  |||||||||||||||||||||  ||||| |||| |||||| |  || | ||| ||| |    
T  7747379 ttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacc 7747280  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  7747279 cggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 9360749 - 9360911
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| |  ||||||||||||||||| ||||| ||||| |||||||||||||||| ||||| |||| ||||||||| || | ||| ||| |    
T  9360749 ttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacc 9360848  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
     | |||||||||      ||||||||||||| |||||||  ||| ||||||| ||| ||||||    
T  9360849 tggtattccccgggtacgtccttggaatgagatccttgcccctgaagcccaagcaatttggtt 9360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 14169610 - 14169772
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||| | ||| ||||  ||||||||||||||| |||||| ||||||||| ||||||| || | |  ||| ||| |    
T  14169610 ttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacc 14169709  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||||||||||     ||||||||| || |||||||  |||||||||||||||||||||||    
T  14169710 cgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 34356279 - 34356149
Alignment:
Q  309 cgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc-gat----ccttggaatgagc 403  Q
    ||||||||  ||||||||| |||||||||||| ||||  ||| ||||||| || |||||||| ||| ||| |||||||| |||    ||||||||  |||    
T  34356279 cgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagc 34356180  T
Q  404 tccttgctactggagcccaaacaacttggtt 434  Q
    ||||||| |||||||||||||||||||||||    
T  34356179 tccttgccactggagcccaaacaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 286 - 434
Target Start/End: Original strand, 10026626 - 10026779
Alignment:
Q  286 gtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcc 385  Q
    ||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| ||||| |||| |||||| || |||  ||| ||| ||| ||||      
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatttt 10026725  T
Q  386 ccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||     ||||||||| ||||||||||| | |||||||||| ||||||||||    
T  10026726 ccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 10026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 417
Target Start/End: Complemental strand, 41220740 - 41220595
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||||||  ||| ||||| |||||||||||||||||||||| ||||| |||  |||||| |  |||| ||| ||| |    
T  41220740 ttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacc 41220641  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactgga 417  Q
    || |||||||||      ||||||||| ||||||||||| ||||||    
T  41220640 cggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 434
Target Start/End: Complemental strand, 2550955 - 2550811
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----a 389  Q
    |||| ||| |||||||| ||||  ||||||||||||||| |||||| |||||  || ||||||| |  |||| ||| ||| |||||||||||||          
T  2550955 ccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacg 2550856  T
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| || ||||||||||| |||||||||||| ||||||||||    
T  2550855 tccttgtaaggagctccttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 431
Target Start/End: Complemental strand, 21286506 - 21286390
Alignment:
Q  320 gctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctact 414  Q
    |||| |||||||||||||||| |||||||||  ||||||||  |||| ||| ||| ||| |||||||||      ||||||||| ||||||||||| |||    
T  21286506 gctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccact 21286407  T
Q  415 ggagcccaaacaacttg 431  Q
    ||||| |||||||||||    
T  21286406 ggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 277 - 385
Target Start/End: Original strand, 28616380 - 28616488
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || ||||||||| ||||||| |||| |||||| |||||||||||||||| ||||  ||| |||| || || ||| |||| ||| |    
T  28616380 ttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacc 28616479  T
Q  377 cgatattcc 385  Q
    |||||||||    
T  28616480 cgatattcc 28616488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 29422320 - 29422157
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| || |||| ||||||  |||||||| ||| ||||  ||||| |||||| ||| ||||  | ||| ||| ||||||| || |||||||| ||| |    
T  29422320 ttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacc 29422221  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |  |||||||||      |||||| || ||||||||||||||||||||||||||||||||||||    
T  29422220 cagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggttt 29422157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 44945698 - 44945635
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    |||||| ||||||| |||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  44945698 ttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcg 44945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 11069983 - 11069821
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| || ||||| ||| |||||  |||| |||||||||| ||||| ||||| |||| |||||| || || | ||| ||| |    
T  11069983 ttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacc 11069884  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
     | |||||||||      |||||||||||||||||| || | ||||||| |||||||||||||    
T  11069883 tggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaacttggtt 11069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 34346288 - 34346369
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| ||||||| || |||| ||||||| ||||||||| || |||||||||||||||||||  ||||| ||| |||||||    
T  34346288 ttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgtt 34346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 431
Target Start/End: Original strand, 45263686 - 45263827
Alignment:
Q  295 ccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----a 389  Q
    |||| |||| || |||||||||  ||||| |||||||||||||||| ||||| |||  |||||| || |||| ||| ||| ||| |||||||||     |    
T  45263686 ccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaa 45263785  T
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    |  ||| || ||||||||||| ||||||||||||||||||||    
T  45263786 tttttgaaaggagctccttgccactggagcccaaacaacttg 45263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 7787146 - 7787050
Alignment:
Q  292 gatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg 388  Q
    ||||||| |||| ||||||| ||||  ||||| |||||||||||||||| ||||| ||| | ||||| || |||||||| ||| ||| |||||||||    
T  7787146 gatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccg 7787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 21180433 - 21180477
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  21180433 tccttggaaggagctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 3643888 - 3644051
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| |  |||| |||||||| ||| ||||   ||||||||||||||||||||| ||||| |||  |||||| |   | |||||  || |    
T  3643888 ttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacc 3643987  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||||      ||||||||||||||||||| | |||||||||||| |||||||||||    
T  3643988 cggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaacttggttt 3644051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 12455415 - 12455304
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || |||| |||| ||||  ||||| |||||||||||||||| |||||  ||  ||||||||| |||||||| ||| |    
T  12455415 ttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacc 12455316  T
Q  377 cgatattccccg 388  Q
    || |||||||||    
T  12455315 cggtattccccg 12455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 21642055 - 21641992
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    |||||| ||||||  || |||| ||||| |||||||||||| ||||||||||||||||||||||    
T  21642055 ttcgcaccggttttcgacccaccaaaggcgggcgattaattcggctcatgcgtagaggcatgcg 21641992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 434
Target Start/End: Original strand, 14853381 - 14853530
Alignment:
Q  292 gatccactaaaggtgggcgattaatttggctcatgcgtagag--gcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg- 388  Q
    |||||||||||| ||| ||| ||||  | |||||| ||||||  |||| || ||||| |||| |||||| || ||| |||| ||||| | |||||||||     
T  14853381 gatccactaaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccgg 14853480  T
Q  389 ----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
        ||||||| || ||| ||||||| |||||||||||||||||||||||    
T  14853481 atacatccttgaaaggagttccttgccactggagcccaaacaacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 18649071 - 18649189
Alignment:
Q  321 ctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctactg 415  Q
    |||||||||||||||||||| ||||  ||||| ||||| |  |||  ||| ||||||| ||||||| ||     |||||||||  |||| ||||| ||||    
T  18649071 ctcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaagcagcttcttgccactg 18649170  T
Q  416 gagcccaaacaacttggtt 434  Q
    |||||||||||||||||||    
T  18649171 gagcccaaacaacttggtt 18649189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 434
Target Start/End: Original strand, 10046487 - 10046639
Alignment:
Q  286 gtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcc 385  Q
    ||||| || |||| |||||||| ||| ||||  |||||||||||||||||||||| ||| |||||| |||||||||  ||  ||| ||| ||| |||||     
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  386 ccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||      | ||||||| ||||||||||| | |||||||||| ||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 10823165 - 10823096
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactgg 346  Q
    |||||| ||||||| || |||| |||||||||||| ||||  ||||| |||||||||||||||| |||||    
T  10823165 ttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 10823096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 16325700 - 16325619
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| ||||||| || |||| || ||||| ||| |||| ||||||||||||||||||||||  ||||| ||| |||||||    
T  16325700 ttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgtt 16325619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 20612578 - 20612699
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactgga-aattgaatccgatattccccgat-----ccttggaatgagctccttgcta 412  Q
    ||||||||| |||||||||||| ||||| ||| ||||||| || |  || ||| ||| ||| ||||||||||      |||||||| ||||||||||| |    
T  20612578 ggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgcca 20612677  T
Q  413 ctggagcccaaacaacttggtt 434  Q
    ||||||||||| ||||||||||    
T  20612678 ctggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 418
Target Start/End: Original strand, 25540405 - 25540551
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||| ||| ||||  ||||| |||||||||||||||| ||||| |||  |||||| || || | ||| ||| |    
T  25540405 ttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacc 25540504  T
Q  377 cgatattcccc-ga----tccttggaatgagctccttgctactggag 418  Q
    |  |||||||| ||    ||||||||||||||||||||| |||||||    
T  25540505 cagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 434
Target Start/End: Complemental strand, 15079558 - 15079426
Alignment:
Q  307 ggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttggaatga 401  Q
    ||||| ||||||||||| ||||||||| |||||  |||||||||  |||||| || |||||||| ||| ||  |||||||||      ||||||||| |     
T  15079558 ggcgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggt 15079459  T
Q  402 gctccttgctactggagcccaaacaacttggtt 434  Q
    | ||||||| || ||||||||| ||||||||||    
T  15079458 gttccttgccaccggagcccaagcaacttggtt 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 2528460 - 2528507
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    ||||||||| |||||| |||| |||||||||||||||| |||||||||    
T  2528460 tccttggaaggagctcattgccactggagcccaaacaatttggtttga 2528507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 23500769 - 23500844
Alignment:
Q  363 ctggaaattgaatccgatattccccgatcc----ttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||| ||| ||| ||||||||||||||| |    |||||| ||||||||||| || ||||||||||||||||||||    
T  23500769 ctgggaatcgaacccgatattccccgatacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 25604655 - 25604594
Alignment:
Q  321 ctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    |||||||||||||||||||  |||||||||| |||| |||| |||||||| ||||||| ||||    
T  25604655 ctcatgcgtagaggcatgcatactggtcaaacgttg-ttcccctggaaatcgaatccggtatt 25604594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 42210263 - 42210425
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| || |||||| |||||||  ||||| |||||||||||||||| ||||| |||| ||||||| |||||| ||| ||| |    
T  42210263 ttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagc 42210362  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||| ||      ||||||||| ||||||||||| ||||||| | || ||||||||||    
T  42210363 cggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 48804791 - 48804629
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| ||  ||| ||| ||| |    
T  48804791 ttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacc 48804692  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||||||| ||||||||||    
T  48804691 cggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 309 - 437
Target Start/End: Complemental strand, 22573888 - 22573756
Alignment:
Q  309 cgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattcccc-----gatccttggaatgagc 403  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||||| |||| ||| |||| ||| ||||||||||||      ||| ||||||  |||    
T  22573888 cgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttg-ttcccctgaaaatcgaacccgatattcccccaatatatctttggaagaagc 22573790  T
Q  404 tccttgctactggagcccaaacaacttggtttga 437  Q
    | |||||||||||||||||| |||||||||||||    
T  22573789 ttcttgctactggagcccaagcaacttggtttga 22573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 13095959 - 13095803
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    ||||||| || |||| ||||||| |||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| ||| ||||    
T  13095959 cggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtatt 13095860  T
Q  384 ccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||      |||||| || ||||||||||| || ||||||||| |||||||||||    
T  13095859 ccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggttt 13095803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 273 - 434
Target Start/End: Original strand, 45960000 - 45960165
Alignment:
Q  273 ggcattcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattg 372  Q
    |||||| ||| ||||||| ||||||  ||||||| |||| ||||  |||| ||||||||||||||||| ||||  ||| ||||||| ||  ||| |||      
T  45960000 ggcatttgcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatca 45960099  T
Q  373 aatccgatattccccgat----ccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||  || |||||||||||    |||||||| |||||||||||||||||||| ||||||||||||||    
T  45960100 aactcggtattccccgatacgtccttggaaagagctccttgctactggagctcaaacaacttggtt 45960165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 27875089 - 27875250
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  || ||||||||||||| ||| ||||  | |||||||||||||||||| | ||||| ||| |||| || || |||| ||| |||||    
T  27875089 ttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatc 27875188  T
Q  377 cgatattcccc-gat---ccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||| |||    ||||||| ||||| ||||| |||||||||||||||||||||||    
T  27875189 cggtattccccagatacgtcttggaaggagctacttgccactggagcccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 38578868 - 38578979
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| ||||  |||||||||||||||||||||| ||||| |||  |||||| || |||| ||| ||| |    
T  38578868 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacc 38578967  T
Q  377 cgatattccccg 388  Q
    ||||||||||||    
T  38578968 cgatattccccg 38578979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 22268088 - 22268193
Alignment:
Q  335 catgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaact 429  Q
    |||||| ||||| ||||||||||| || |||| ||| ||| ||| |||||||| |     ||||||||||||||||||||| ||||||||||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T
Q  430 tggttt 435  Q
    ||||||    
T  22268188 tggttt 22268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 43925577 - 43925458
Alignment:
Q  320 gctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctact 414  Q
    ||||||||||||||||||||| ||||  ||| ||||||| || |||| ||| ||| ||| |||||||||      ||||||||| ||||||||||| |||    
T  43925577 gctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccact 43925478  T
Q  415 ggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||    
T  43925477 ggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 47341941 - 47341822
Alignment:
Q  320 gctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctact 414  Q
    |||| |||||||||||||||| ||||| ||| ||||||| || |||| ||| |||  || |||||||||      ||||||||||||||||||||| |||    
T  47341941 gctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccact 47341842  T
Q  415 ggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||    
T  47341841 ggagcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 438
Target Start/End: Complemental strand, 1606049 - 1605883
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| ||||||| |||||||||||| ||||  |||||| || |||||||||| | ||||| |||  |||||| || |||||||| ||| |    
T  1606049 ttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaacc 1605950  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtttgaa 438  Q
     | ||||| |||      ||||||||| ||||||||||  | ||||| |||||||||||||||||||    
T  1605949 aggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttggtttgaa 1605883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 4195203 - 4195365
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    ||||||||||||||  | |||| || ||||| ||  ||||  |||||||||||||||||||||| ||| | ||||||||||| |  |||||||| |||      
T  4195203 ttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaact 4195302  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||| | ||||||||||| |||||||||||| ||||||||||    
T  4195303 cggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 10047877 - 10048039
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| || ||||| ||| |||||  |||||||||||||||| |||| ||||| ||| ||||||| || |||| ||| ||| |    
T  10047877 ttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacc 10047976  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| |||||||  ||| ||||||||||    
T  10047977 cggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 17748383 - 17748545
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||  |||||||| ||| ||||  ||||| | |||||||||||||| ||||| |||  |||||| || |||| ||| ||| |    
T  17748383 ttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacc 17748482  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || ||||||||||     |||||||||  |||| ||||| ||| |||||||||||||||||||    
T  17748483 cggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 432
Target Start/End: Complemental strand, 34659308 - 34659174
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccg-----atccttgga 397  Q
    ||||||||| ||||  ||||| |||||||||||||||| |||||||||  |||||| ||  ||  ||| ||| ||| |||||||||     |||| ||||    
T  34659308 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctgga 34659209  T
Q  398 atgagctccttgctactggagcccaaacaacttgg 432  Q
    | ||||||||||| |||||||||||||||||||||    
T  34659208 aggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 43861973 - 43862136
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  ||||||| |||||||   || ||||  |||||||||||||||||||||| ||||| |||| |||||| || |||| ||| ||| |    
T  43861973 ttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacc 43862072  T
Q  377 cgatattcccc-ga----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    || |||||||| ||    || |||||| |||||||||||  || ||||||||||||||||||||    
T  43862073 cggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttggttt 43862136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 3353532 - 3353448
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttcc 361  Q
    |||||| ||||||| ||||||  |||||||| ||| ||||  ||||| |||||||||||||||| ||||| ||||||||||||||    
T  3353532 ttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttcc 3353448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 22974068 - 22973912
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    ||||||| || |||| |||||||| ||| |||| ||||||||||||||| ||||||  ||||| |||  |||||| || |||  ||| ||| ||| ||||    
T  22974068 cggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtatt 22973969  T
Q  384 ccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||     ||||||||| |||||||| || | | ||||||||||||||||||||    
T  22973968 ccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaacttggttt 22973912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 435
Target Start/End: Complemental strand, 27028387 - 27028224
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||||||| |||| ||||   ||||||| ||||||||||||| ||||| ||| ||||||| || |||||||| ||| |    
T  27028387 ttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 27028288  T
Q  377 cgatattcccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
     | |||| |||       | ||||||||||||||||||| || |||| ||||||||||||||||    
T  27028287 tggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaacttggttt 27028224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 19914727 - 19914767
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcg 340  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19914727 aaaggtgggcgattaatctggctcatgcgtagaggcatgcg 19914767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 21530849 - 21530693
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatatt 383  Q
    ||||||| || |||| ||||||| |||||||||| ||||| |||||||||||||| | ||||  ||| ||||||| || |||| |||  || ||  ||||    
T  21530849 cggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtatt 21530750  T
Q  384 cccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||       ||||||||| ||||||||||| ||||||||| || |||||||||||    
T  21530749 ccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttggttt 21530693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 4228870 - 4228917
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtttga 437  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||    
T  4228870 tccttggaaggagctccttgccgctggagcccaaacaacttggtttga 4228917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 435
Target Start/End: Original strand, 22993368 - 22993531
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||||||| |||| ||||  || || |||||||||||||||  ||||| |||  |||||| |  || | ||| ||| |    
T  22993368 ttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacc 22993467  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||      ||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  22993468 cgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttt 22993531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 430
Target Start/End: Complemental strand, 42032201 - 42032046
Alignment:
Q  280 gcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccga 379  Q
    ||||||||||| || |||  |||||||| | | ||||| |||||||||||||| | ||| | ||||| |||| |||||| ||  ||| ||| ||| | |     
T  42032201 gcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccagg 42032102  T
Q  380 tattccccga-----tccttggaatgagctccttgctactggagcccaaacaactt 430  Q
    |||||||||      ||||||||| ||||| |||||||||||||||||||||||||    
T  42032101 tattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 29805460 - 29805522
Alignment:
Q  296 cactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||||||| | ||||||||||||||||||||||||| |||||| ||||  |||| ||||||    
T  29805460 cactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgtt 29805522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 1797526 - 1797409
Alignment:
Q  319 ggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tccttggaatgagctccttgctac 413  Q
    ||||| ||||||||| |||||| ||||| |||  ||||||||| |||| ||| ||| ||| |||||| ||      ||||||||| ||||||||||| ||    
T  1797526 ggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccac 1797427  T
Q  414 tggagcccaaacaacttg 431  Q
    |||||||||| |||||||    
T  1797426 tggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 5039541 - 5039582
Alignment:
Q  394 tggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  5039541 tggaaggagctccttgccactggagcccaaacaacttggttt 5039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 434
Target Start/End: Original strand, 8734687 - 8734849
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| |||||||||||| |||| |||||| ||||| |||||||||| ||||  |||   ||||| || |  ||||| ||| |    
T  8734687 ttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaacc 8734786  T
Q  377 cgatattccc-cga----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
     |||||||||  ||    ||||||||| ||||||||||| ||||  |||||||||||||||||    
T  8734787 tgatattcccgagatatgtccttggaaggagctccttgccactgacgcccaaacaacttggtt 8734849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 19914821 - 19914866
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  19914821 tccttggaaggagctccttgccactggagcccaagcaacttggttt 19914866  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 5069816 - 5069975
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||||||||||| || |||| |||||||||||| ||||  ||||  |||||||||||||||  ||| |  ||  |||||| |  |||||||| ||| |    
T  5069816 ttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacc 5069915  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttg 431  Q
    || |||| ||||      ||||| |||  |||||||||| ||||||||||||||||||||    
T  5069916 cggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 43346901 - 43346942
Alignment:
Q  393 ttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||||| ||||||||||| ||||||| |||||||||||||||    
T  43346901 ttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

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Target: scaffold0002 (Bit Score: 47; Significance: 7e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 678 - 516
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||||||| |||| |||| |||||||| |||||||||||||  |||| |||| ||||||| || |||  ||| ||| |    
T  678 ttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacc 579  T
Q  377 cgatattccccg-----atccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||||||||      ||||||||| ||||||||||| ||| |||||||| ||||||||||    
T  578 cggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttggtt 516  T

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Target: scaffold0291 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 6963 - 6852
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||| || |||| ||||||| |||| ||||  |||||||||||||||||||||| ||||| ||| ||||||| || |||| ||| ||| |    
T  6963 ttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacc 6864  T
Q  377 cgatattccccg 388  Q
    || |||||||||    
T  6863 cggtattccccg 6852  T

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Target: scaffold0170 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 9945 - 9790
Alignment:
Q  285 ggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattc 384  Q
    |||||| || |||| |||||||| ||| ||||  ||||| |||||||||||||||| ||||| |||  |||||| || |||||||| ||||||| |||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  385 ccc-----gatccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    | |      |||||||||| ||||||||||  ||||||| | ||||||||||||||    
T  9845 ctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttggttt 9790  T

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Target: scaffold0316 (Bit Score: 43; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 1615 - 1725
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| ||||||  || |||| |||||||||||| |||||||||||||||||||||||||||| |||||  ||  |||||| || |||||||| ||| |    
T  1615 ttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacc 1714  T
Q  377 cgatattcccc 387  Q
     | ||||||||    
T  1715 tggtattcccc 1725  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 250132 - 250177
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  250132 tccttggaatgagctccttgccactggagcccaagcaacttggttt 250177  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 8829 - 8873
Alignment:
Q  390 tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  8829 tccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 435
Target Start/End: Complemental strand, 68621 - 68462
Alignment:
Q  278 tcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatcc 377  Q
    ||||| ||||||  || |||| |||||||||||| ||||  ||||| |||||||||||||||| ||    |||  |||||| || |||| ||| ||| ||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc---caagcgttgttccccctgggaatcgaaccc 68525  T
Q  378 gatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggttt 435  Q
    |||||| ||||      ||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  68524 gatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggttt 68462  T

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Target: scaffold0209 (Bit Score: 36; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 277 - 434
Target Start/End: Complemental strand, 12681 - 12521
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    |||||| |||||||  |||||  |||||||||||| ||||  | |||||||||||||||||||| |||||||||  ||||||  | || | ||| ||| |    
T  12681 ttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcgaacc 12584  T
Q  377 cgatattccccga-----tccttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    || |||| | |||     |||||||||  |||||||||| ||| |||||||||||||||||||    
T  12583 cggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaacttggtt 12521  T

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Target: scaffold0029 (Bit Score: 36; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 41129 - 40990
Alignment:
Q  300 aaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatccgatattccccga-----tcctt 394  Q
    |||| ||||||| ||||  ||||| |||||||||||||||  ||||  ||| ||||||| ||  ||  ||| ||| ||||||||||| ||     ||| |    
T  41129 aaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccctgagtacgtccat 41030  T
Q  395 ggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  41029 ggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 25905 - 25947
Alignment:
Q  392 cttggaatgagctccttgctactggagcccaaacaacttggtt 434  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  25905 cttggaaggagctctttgctactggagcccaaacaacttggtt 25947  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 95008 - 95066
Alignment:
Q  303 ggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttcc 361  Q
    ||||||||| ||||  |||||||||||| ||||||||| |||||||||| |||||||||    
T  95008 ggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtttcc 95066  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 355
Target Start/End: Original strand, 7843 - 7914
Alignment:
Q  284 cggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgtt 355  Q
    ||||||| ||||||| |||||||||||| ||||   ||| ||||||||||||||||| ||||| ||| ||||    
T  7843 cggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtt 7914  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 25193 - 25112
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtt 358  Q
    |||||| ||||||| ||||||| |||||||| |||||||| ||  |||||||||||  |||||| ||||  |||||||||||    
T  25193 ttcgcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactgtccaaatgttgtt 25112  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 42833 - 42901
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactg 345  Q
    |||||| ||||||| || |||| |||||||||||| ||||  |||||||| ||||||||||||| ||||    
T  42833 ttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactg 42901  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 9550 - 9495
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtaga 332  Q
    |||||| ||||||| || |||| |||||||| ||| ||||||||||||||||||||    
T  9550 ttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtaga 9495  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.000001
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 16987 - 16878
Alignment:
Q  277 ttcgcatcggtttcggatccactaaaggtgggcgattaatttggctcatgcgtagaggcatgcggactggtcaaatgttgtttccactggaaattgaatc 376  Q
    ||||||||||||||  | |||| ||||||| |||| |||| |||||| ||||||||| ||| || ||||  |||  ||||||||| |||  ||||||| |    
T  16987 ttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaacc 16888  T
Q  377 cgatattccc 386  Q
    | ||||||||    
T  16887 caatattccc 16878  T

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