View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9134_high_1 (Length: 385)
Name: NF9134_high_1
Description: NF9134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9134_high_1 |
 | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 8 - 384
Target Start/End: Complemental strand, 11781674 - 11781298
Alignment:
| Q |
8 |
ttggtgtttactctcaaaacttgcatttggttgtaaggactgtgatcgcgataaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgt |
107 |
Q |
| |
|
||||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11781674 |
ttggtctttactctcgaaacatgcatttggtagtaaggactgtgatcgccgtaaatacccaaacctagaagagattggcaggaagattgctaaaaaatgt |
11781575 |
T |
|
| Q |
108 |
gggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaattctgaacagcgacatatggaatt |
207 |
Q |
| |
|
|| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||||| | |
|
|
| T |
11781574 |
ggtggattgccaatagctgccaagacacttggaggacttatgcgttcaaaggtagttgaaaaggagtggacttcaattctcaacagcaatatatggaact |
11781475 |
T |
|
| Q |
208 |
tacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaagga |
307 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781474 |
tacgaaatgataaagttttgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaagga |
11781375 |
T |
|
| Q |
308 |
ttacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggtgaaaatg |
384 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
11781374 |
ttacccacttgagaggaaaaaactggttttgttgtggatggcagaaggcctccttgattattctcaaggcgaaaatg |
11781298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 385
Target Start/End: Original strand, 10517862 - 10518239
Alignment:
| Q |
8 |
ttggtgtttactctcaaaacttgcatttggttgtaaggactgtgatcgcgataaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgt |
107 |
Q |
| |
|
||||| |||||||||||||| |||||||||| |||||||| |||||| | |||||||||||| || ||| ||||||||||||||||||||||||||||| |
|
|
| T |
10517862 |
ttggtctttactctcaaaacatgcatttggtagtaaggacagtgatcacagtaaatacccaaatcttgaagagattggcaggaagattgctaaaaaatgt |
10517961 |
T |
|
| Q |
108 |
gggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaattctgaacagcgacatatggaatt |
207 |
Q |
| |
|
|| || || || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| |||||||||| | |
|
|
| T |
10517962 |
ggtgggttaccaatagctgccaaaacacttggaggacttatgcgttcaaaggtagttgaaaaggagtggtcttcaattctaaacagcaacatatggaact |
10518061 |
T |
|
| Q |
208 |
tacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaagga |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10518062 |
tacgaaatgataaaattttgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaagga |
10518161 |
T |
|
| Q |
308 |
ttacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggtgaaaatgc |
385 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
10518162 |
ttacccacttgagaggaaaaaattggttttgttgtggatggcagaaggtttccttgattattctcaagatgaaaatgc |
10518239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 10500957 - 10501325
Alignment:
| Q |
14 |
tttactctcaaaacttgcatttggttgtaaggactgtgatcgcgataaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtggggga |
113 |
Q |
| |
|
||||||||| || | |||||||||| | | |||| || ||| | |||||||||||| |||||| ||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
10500957 |
tttactctcgaagcatgcatttggtgatgaagactatgttcgtggtaaatacccaaagctagaagagattggcaggaagattgctagaaagtgtggtgga |
10501056 |
T |
|
| Q |
114 |
ttgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaa |
213 |
Q |
| |
|
||||| |||||||| ||| |||| |||||||| |||||||||||| ||||| || ||||||||| |||||||||| |||||||||||||| ||| ||| |
|
|
| T |
10501057 |
ttgccgatagctgcaaaagcacttggaggactattgcgttcaaaggcggttgaaaaagagtggactgcaattctgaatagcgacatatggaacttaagaa |
10501156 |
T |
|
| Q |
214 |
atgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattaccc |
313 |
Q |
| |
|
|||||| |||| |||| ||||| |||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| |||||||| |
|
|
| T |
10501157 |
atgatacaattttgcccactttgtatttgagttatcaatatcttccctctcatttaaaaagatgctttgcctattgttctattttcccaaaagattaccc |
10501256 |
T |
|
| Q |
314 |
acttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggtgaaaa |
382 |
Q |
| |
|
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10501257 |
actggataggaagaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggcgaaaa |
10501325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 81 - 373
Target Start/End: Original strand, 10089240 - 10089532
Alignment:
| Q |
81 |
attggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggactt |
180 |
Q |
| |
|
|||||| |||||||||| | || ||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
10089240 |
attggccggaagattgcaaggaagtgtggaggattgccaatagctgccaaaacactaggaggacttctacgttcaaaggtagaaataacagagtggactt |
10089339 |
T |
|
| Q |
181 |
caattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgttt |
280 |
Q |
| |
|
||||| ||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
10089340 |
caattttgaacagcgacatatggaacttatcaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctgtcatttgaaaagatgttt |
10089439 |
T |
|
| Q |
281 |
cgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctca |
373 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10089440 |
tgcatattgttcaatttttccaaaggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctca |
10089532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 84 - 376
Target Start/End: Original strand, 10261151 - 10261443
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| ||||||||||||||||| ||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10261151 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgccaaaacacttggaggacttctacgttcaaaggtagacataacagagtggacttcaa |
10261250 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| ||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10261251 |
ttttgaacagcgacatatggaacttatcaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10261350 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10261351 |
atattgttcaatttttccaaaggattatccacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaagg |
10261443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 84 - 376
Target Start/End: Original strand, 10032456 - 10032748
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| ||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10032456 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgccaaaacacttggagggcttctacgttcaaaggtagacataacagagtggacttcaa |
10032555 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| ||||||||||||||||||| ||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10032556 |
ttttgaacagcgacatatggaacttatcaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10032655 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10032656 |
atattgttcaatttttccaaaggattatccacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaagg |
10032748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 84 - 376
Target Start/End: Original strand, 10127381 - 10127673
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10127381 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacactaggaggacttctacgttcaaaggtagacataacagagtggacttcaa |
10127480 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||| | |||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10127481 |
ttttgaacaacaacatatggaacttgcgaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10127580 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10127581 |
atattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttccttgattgttctcaagg |
10127673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 105 - 373
Target Start/End: Original strand, 10196147 - 10196415
Alignment:
| Q |
105 |
tgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaattctgaacagcgacatatgga |
204 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| |||||||||||||||||| |
|
|
| T |
10196147 |
tgtggaggattgccaatagctgctaaaacactaggaggacttctacgttcaaaggtagaaataacagagtggacttcaattttgaacagcgacatatgga |
10196246 |
T |
|
| Q |
205 |
atttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaa |
304 |
Q |
| |
|
| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
10196247 |
acttatcaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctgtcatttgaaaagatgttttgcatattgttcaatttttccaaa |
10196346 |
T |
|
| Q |
305 |
ggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctca |
373 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10196347 |
ggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctca |
10196415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 84 - 376
Target Start/End: Original strand, 10663979 - 10664271
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10663979 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacattaggaggacttctacgttcaaaggtagacataacagagtggacttcaa |
10664078 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| |||||||||| || || |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || |
|
|
| T |
10664079 |
ttttgaacagcaacatatggaacttgcgcaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaagagatgttttgc |
10664178 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10664179 |
atattgttcaatttttccaaaggattacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagg |
10664271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 84 - 376
Target Start/End: Complemental strand, 10363414 - 10363122
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| || ||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10363414 |
ggcaggaagattgcaagaaagtgtggaggattgccaattgctgctaaaacactaggaggacttctccgttcaaaggtagacataacagagtggacttcaa |
10363315 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| |||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| || || |
|
|
| T |
10363314 |
ttttgaacagcaacatatggaacttgcgaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctctcacttgaaaagatgctttgc |
10363215 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10363214 |
atattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagg |
10363122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 9839314 - 9839604
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaag-gagtggacttca |
182 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| | ||| |||||||||||| |
|
|
| T |
9839314 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctacgttcaaaggtagac-ataagtgagtggacttca |
9839412 |
T |
|
| Q |
183 |
attctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcg |
282 |
Q |
| |
|
||| ||||||||||||||||||| ||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | |
|
|
| T |
9839413 |
attttgaacagcgacatatggaacttatcaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaaaagatgctttg |
9839512 |
T |
|
| Q |
283 |
cctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaa |
374 |
Q |
| |
|
| |||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9839513 |
catattgttcaatttttccaaaggattgcccactcgataggaaggaattggttttgttgtggatggcagaaggcttccttgattgttctcaa |
9839604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 84 - 375
Target Start/End: Original strand, 10672135 - 10672426
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10672135 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctacgttcaaaggtagacataactgagtggacttcaa |
10672234 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| ||||||| || || ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10672235 |
ttttgaacagcaacatatgaaacttgcgaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10672334 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaag |
375 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| | ||| | ||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
10672335 |
atattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaag |
10672426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 84 - 374
Target Start/End: Original strand, 9850192 - 9850482
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaag-gagtggacttca |
182 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| | ||| |||||||||||| |
|
|
| T |
9850192 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctacgttcaaaggtagac-ataagtgagtggacttca |
9850290 |
T |
|
| Q |
183 |
attctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcg |
282 |
Q |
| |
|
||| ||||||| ||||||||||| ||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || | |
|
|
| T |
9850291 |
attttgaacagtgacatatggaacttatcaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaaaagatgctttg |
9850390 |
T |
|
| Q |
283 |
cctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaa |
374 |
Q |
| |
|
| |||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9850391 |
catattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaa |
9850482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 84 - 376
Target Start/End: Complemental strand, 10375461 - 10375169
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| || | |||||||| || | |
|
|
| T |
10375461 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctacgttcaaaggtagatgtaacagagtggacatcca |
10375362 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| | ||||||| |||| |||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10375361 |
ttttgaacagcaatgtatggaacttacctaatgattacattcttcctgctttgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10375262 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10375261 |
atattgttcaatttttcccaaggattgcccacttgataggaagcaattggttttgttgtggatggcagaaggctttcttgattgttctcaagg |
10375169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 84 - 375
Target Start/End: Original strand, 10527811 - 10528102
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
||||| |||||||| | ||| | ||| |||||||| |||||||| |||||| ||||||||||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
10527811 |
ggcagaaagattgcaagaaagtatggaggattgccaatagctgctaaaacaataggaggacttctacgttcaaaggtagacataacagagtggacttcaa |
10527910 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| || ||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
10527911 |
ttttgaacagcaacgtatggaacttatcaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctctcatttgaaaagatgttttgc |
10528010 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaag |
375 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| | ||| | ||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
10528011 |
atattgttcaatttttccaaaggatttcccacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaag |
10528102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 84 - 376
Target Start/End: Complemental strand, 10433660 - 10433368
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||| ||||||| | ||| ||||| |||||||| || ||||| |||||| ||||||||||| | ||||||||||||| | | ||||||||||||| |
|
|
| T |
10433660 |
ggcagggagattgcaagaaagtgtggaggattgccaattgctgctaaaacaataggaggacttttacgttcaaaggtagatataacagagtggacttcaa |
10433561 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||||||| || ||||||| ||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||| || || |
|
|
| T |
10433560 |
ttttgaacagcaacgtatggaacttatcaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcgtttgaaaagatgctttgc |
10433461 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10433460 |
atattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagg |
10433368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 87 - 378
Target Start/End: Original strand, 11769690 - 11769981
Alignment:
| Q |
87 |
aggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaattc |
186 |
Q |
| |
|
||||||||||| | ||| ||||| |||||||| || || || | |||| ||||||| ||| | ||||||||||||| | | ||||||||| ||||| |
|
|
| T |
11769690 |
aggaagattgcaagaaagtgtggaggattgccaattgccgctataacaataggagggcttctacgttcaaaggtagatataacagagtggactgcaattt |
11769789 |
T |
|
| Q |
187 |
tgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgccta |
286 |
Q |
| |
|
| |||| ||||||||||| ||| ||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| || || |
|
|
| T |
11769790 |
taaacaatgacatatggaacttatcaaatgataatattcttcctgctttgcatttaagttatcaatatcttccatctcacttgaaaagatgttttgcata |
11769889 |
T |
|
| Q |
287 |
ttgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggtg |
378 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
11769890 |
ttgttcaatttttccaaaggactacccacttgataggaagaaattgattttgttgtggatggcagaaggattccttgattgttctcaaggtg |
11769981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 63 - 374
Target Start/End: Original strand, 13333336 - 13333647
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||||| |
|
|
| T |
13333336 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctgctaaaacactcggaggaattttgcgttcaaaggtag |
13333435 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| |||||||| |||| | |||||||||| | | ||||||||||||||||| || |
|
|
| T |
13333436 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgatacaattttacctgctttgcgtctaagttatcaatatcttccctc |
13333535 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcctt |
362 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||||| |||||||| | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
13333536 |
acatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttccta |
13333635 |
T |
|
| Q |
363 |
gattattctcaa |
374 |
Q |
| |
|
|| |||||||| |
|
|
| T |
13333636 |
gagcattctcaa |
13333647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 84 - 370
Target Start/End: Original strand, 10077722 - 10078008
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | |||||||||||| | | |||||||| ||| |
|
|
| T |
10077722 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctaggttcaaaggtagatataatagagtggacaacaa |
10077821 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||| || | ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||| || |
|
|
| T |
10077822 |
ttttgaatagtaatgtatggaacttaccaaatgataaaattcttcctgctttgcatttgagttatcaatgtcttccctctcatttgaaaatatgttttgc |
10077921 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattc |
370 |
Q |
| |
|
|||||||| ||||||||||||| | || ||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
10077922 |
atattgttcaatttttccaaagggtcacacacttgacaggaagaaattggttttgctgtggatggcagaaggctttcttgattattc |
10078008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 81 - 376
Target Start/End: Original strand, 10581051 - 10581355
Alignment:
| Q |
81 |
attggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggactt |
180 |
Q |
| |
|
||||||||||||||||| | || |||||||||||||| |||||||| |||||||||||||||||| | | ||||||||||| | ||||||||| |
|
|
| T |
10581051 |
attggcaggaagattgcaagaaggtgtgggggattgccaatagctgctaaaacactaggaggacttctcccttcaaaggtagacataacaaagtggactt |
10581150 |
T |
|
| Q |
181 |
caattct---------gaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaa |
271 |
Q |
| |
|
||||| | ||||||| ||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10581151 |
caattttttcaattttgaacagcagcatatggaacttgcgaaatgataatattcttcctgcattgcatttgagttatcaatatcttccctctcatttgaa |
10581250 |
T |
|
| Q |
272 |
aagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattct |
371 |
Q |
| |
|
|||||| || || |||||||| |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10581251 |
aagatgctttgcatattgttcaatttttccaaaggattgcccactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttca |
10581350 |
T |
|
| Q |
372 |
caagg |
376 |
Q |
| |
|
||||| |
|
|
| T |
10581351 |
caagg |
10581355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 374
Target Start/End: Original strand, 13344521 - 13344832
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||||| |
|
|
| T |
13344521 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctgctaaaacactcggaggaattttgcgttcaaaggtag |
13344620 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| ||||||||| ||| | |||||||| | | | ||||||||||||||||| || |
|
|
| T |
13344621 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgataatattttacctgctttacgtctaagttatcaatatcttccctc |
13344720 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcctt |
362 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||||||| ||||| || | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
13344721 |
acatttgaaaagatgttttgcctattgctcaatttttccaaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttccta |
13344820 |
T |
|
| Q |
363 |
gattattctcaa |
374 |
Q |
| |
|
|| |||||||| |
|
|
| T |
13344821 |
gagcattctcaa |
13344832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 84 - 370
Target Start/End: Original strand, 10184695 - 10184981
Alignment:
| Q |
84 |
ggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggacttcaa |
183 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||| |||||||| |||||| ||||||||||| | |||| ||||||| | | |||||||| ||| |
|
|
| T |
10184695 |
ggcaggaagattgcaagaaagtgtggaggattgccaatagctgctaaaacaataggaggacttctaggttcgaaggtagatataatagagtggacaacaa |
10184794 |
T |
|
| Q |
184 |
ttctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgc |
283 |
Q |
| |
|
|| |||| ||| | ||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||| |||||| || |
|
|
| T |
10184795 |
ttttgaatagcaatgtatggaacttaccaaatgataaaattcttcctactttgcatttgagttatcaatgtcttccctctcatttgaaaatatgttttgc |
10184894 |
T |
|
| Q |
284 |
ctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattc |
370 |
Q |
| |
|
|||||||||||||||||||||| | || ||| ||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
10184895 |
atattgttctatttttccaaagggtcacacacatgacaggaagaaattggttttgctgtggatggcagaaggctttcttgattattc |
10184981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 63 - 374
Target Start/End: Original strand, 13171463 - 13171774
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||| | |||||||| |||||| || ||||||||||||||| |
|
|
| T |
13171463 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctcctaaaacactcggaggaattttgcgttcaaaggtag |
13171562 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| ||||||||| ||| | |||||||||| | | ||||||||||||||||| || |
|
|
| T |
13171563 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgataatattttacctgctttgcgtctaagttatcaatatcttccctc |
13171662 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcctt |
362 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||||| ||||| || | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
13171663 |
acatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttccta |
13171762 |
T |
|
| Q |
363 |
gattattctcaa |
374 |
Q |
| |
|
|| |||||||| |
|
|
| T |
13171763 |
gagcattctcaa |
13171774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 59 - 361
Target Start/End: Original strand, 13161408 - 13161710
Alignment:
| Q |
59 |
taaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaag |
158 |
Q |
| |
|
||||| |||||| || ||| | ||||| || ||||| || ||||||||||| || ||||| |||||||| ||||| || || ||| || ||||||||||| |
|
|
| T |
13161408 |
taaatgcccaaatctggaagaaattggtagaaagatcgccaaaaaatgtggtgggttgcccatagctgctaaaacgctcggtggaattttgcgttcaaag |
13161507 |
T |
|
| Q |
159 |
gtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttc |
258 |
Q |
| |
|
|||| || || ||||||| | ||||||| || || ||||||||||| |||| ||||||| | ||| | |||||||||| | | |||||||||||||||| |
|
|
| T |
13161508 |
gtagatgctaaagagtggagtacaattctaaatagtgacatatggaacttaccaaatgatcatattttacctgctttgcgtctaagttatcaatatcttc |
13161607 |
T |
|
| Q |
259 |
cttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggctt |
358 |
Q |
| |
|
| || ||||||||||||||||| |||||||| || |||||||| ||||||| |||||||| | ||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
13161608 |
cctcacatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggctt |
13161707 |
T |
|
| Q |
359 |
cct |
361 |
Q |
| |
|
||| |
|
|
| T |
13161708 |
cct |
13161710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 59 - 361
Target Start/End: Original strand, 13290093 - 13290395
Alignment:
| Q |
59 |
taaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaag |
158 |
Q |
| |
|
||||| |||||| || ||| | ||||| || ||||| || ||||||||||| || ||||| |||||||| ||||| || || ||| || ||||||||||| |
|
|
| T |
13290093 |
taaatgcccaaatctggaagaaattggtagaaagatcgccaaaaaatgtggtgggttgcccatagctgctaaaacgctcggtggaattttgcgttcaaag |
13290192 |
T |
|
| Q |
159 |
gtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttc |
258 |
Q |
| |
|
|||| || || ||||||| | ||||||| || || ||||||||||| |||| ||||||||| ||| | |||||||||| | | |||||||||||||||| |
|
|
| T |
13290193 |
gtagatgctaaagagtggagtacaattctaaatagtgacatatggaacttaccaaatgataatattttacctgctttgcgtctaagttatcaatatcttc |
13290292 |
T |
|
| Q |
259 |
cttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggctt |
358 |
Q |
| |
|
| || ||||||||||||||||| |||||||| || |||||||| ||||||| ||||||| | ||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
13290293 |
cctcacatttgaaaagatgttttgcctattgctcaatttttccgaaggatttttcacttgacaagaaggaattgattttgttatggatggcagaaggctt |
13290392 |
T |
|
| Q |
359 |
cct |
361 |
Q |
| |
|
||| |
|
|
| T |
13290393 |
cct |
13290395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 207 - 375
Target Start/End: Complemental strand, 11246114 - 11245946
Alignment:
| Q |
207 |
ttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaagg |
306 |
Q |
| |
|
|||| ||||||||| || ||||||| |||| | |||| |||||||||||| | ||||| |||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
11246114 |
ttaccaaatgataacatattgcctgcattgcttctgagctatcaatatctttcctctcaattgaaaagatgttttgcctattgttcgatttttccgaagg |
11246015 |
T |
|
| Q |
307 |
attacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaag |
375 |
Q |
| |
|
| || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11246014 |
actatccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgatcattctcaag |
11245946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 373
Target Start/End: Complemental strand, 11159519 - 11159344
Alignment:
| Q |
198 |
atatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctattt |
297 |
Q |
| |
|
|||||||| |||| |||||| || || | ||||| |||| | ||||||||||||||||||| || || |||||||||||||| | |||||||| |||| |
|
|
| T |
11159519 |
atatggaacttaccaaatgacaatgttttacctgcattgcttctgagttatcaatatcttccctcccaattgaaaagatgtttttcatattgttccattt |
11159420 |
T |
|
| Q |
298 |
ttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctca |
373 |
Q |
| |
|
|||||||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11159419 |
ttccaaaggactatacacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattattctca |
11159344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 265 - 376
Target Start/End: Complemental strand, 13854115 - 13854004
Alignment:
| Q |
265 |
atttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttga |
364 |
Q |
| |
|
|||||||||||||||| || |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13854115 |
atttgaaaagatgttttgcatattgttcaatttttccaaaggactacccacttgataggaagcaattggttttgttgtggatggcagaaggcttccttga |
13854016 |
T |
|
| Q |
365 |
ttattctcaagg |
376 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
13854015 |
ttgttctcaagg |
13854004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 198 - 375
Target Start/End: Original strand, 10889873 - 10890050
Alignment:
| Q |
198 |
atatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctattt |
297 |
Q |
| |
|
|||||||| |||| |||||| || || | ||||| |||| | ||||||||||||||||||| || || |||||||||||||| | || ||||| |||| |
|
|
| T |
10889873 |
atatggaacttaccaaatgacaatgttttacctgcattgcttctgagttatcaatatcttccctcccaattgaaaagatgtttttcatactgttccattt |
10889972 |
T |
|
| Q |
298 |
ttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaag |
375 |
Q |
| |
|
|||||||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
10889973 |
ttccaaaggactatacacttgataggaagaaattggttttgttgtggatggcagaaggcttcattgatcattctcaag |
10890050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 382
Target Start/End: Original strand, 8861713 - 8862037
Alignment:
| Q |
58 |
ataaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaa |
157 |
Q |
| |
|
|||||| | ||||||||||| ||||| || |||||||| | ||| |||| || ||||| |||||||| |||||||| |||||| | ||||||| || |
|
|
| T |
8861713 |
ataaatgctcaaacctagaagcaattggtagaaagattgcaagaaagtgtgctgggttgcccatagctgcaaaaacacttggaggagtattgcgttcgaa |
8861812 |
T |
|
| Q |
158 |
ggtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatctt |
257 |
Q |
| |
|
|| || || ||||||||| | || |||||| | | |||||||| |||| |||||| || || | ||||| |||| | ||||||||||||||||| |
|
|
| T |
8861813 |
aagagatgccaaagagtggactgaagttttgaacaacaaaatatggaacttaccaaatgacaatgttttacctgcattgcttctgagttatcaatatctt |
8861912 |
T |
|
| Q |
258 |
ccttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggct |
357 |
Q |
| |
|
|| || || |||||||||||||| | |||||||| |||||||||||||| || ||||| | ||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
8861913 |
ccctcccaattgaaaagatgtttttcatattgttccatttttccaaaggactattcacttaataggaagcaattggtattgttgtggatggcagaaggct |
8862012 |
T |
|
| Q |
358 |
tccttgattattctcaaggtgaaaa |
382 |
Q |
| |
|
|||||||| ||||| ||| |||||| |
|
|
| T |
8862013 |
tccttgatcattctaaagatgaaaa |
8862037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 58 - 371
Target Start/End: Complemental strand, 11148496 - 11148183
Alignment:
| Q |
58 |
ataaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaa |
157 |
Q |
| |
|
|||||| | ||||||||||| ||||| || |||||||| | ||| |||| || ||||| |||||||| |||||||| |||||| | |||||||||| |
|
|
| T |
11148496 |
ataaatgctcaaacctagaagcaattggtagaaagattgcaagaaagtgtgttgggttgcccatagctgcaaaaacacttggaggagtattgcgttcaaa |
11148397 |
T |
|
| Q |
158 |
ggtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatctt |
257 |
Q |
| |
|
|| || || ||||||||| | || |||||| | | |||||||| |||| |||||| || | | ||||| |||| | ||||||||||||||||| |
|
|
| T |
11148396 |
aagagatgccaaagagtggactgaagttttgaacaacaaaatatggaacttaccaaatgacaatgtgttacctgcattgcttctgagttatcaatatctt |
11148297 |
T |
|
| Q |
258 |
ccttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggct |
357 |
Q |
| |
|
|| || || |||||||||||||| | |||||||| |||||||||||||| || ||||| | ||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
11148296 |
ccctcccaattgaaaagatgtttttcatattgttccatttttccaaaggactattcacttaataggaatcaattggtattgttgtggatggcagaaggct |
11148197 |
T |
|
| Q |
358 |
tccttgattattct |
371 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
11148196 |
tccttgatcattct |
11148183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 371
Target Start/End: Complemental strand, 11130498 - 11130355
Alignment:
| Q |
228 |
cctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaa |
327 |
Q |
| |
|
||||| |||| | ||||||||||||||||||| || || |||||||||||||| | |||||||| |||||||||||||| || ||||| | ||||| |
|
|
| T |
11130498 |
cctgcattgcttctgagttatcaatatcttccctcccaattgaaaagatgtttttcatattgttccatttttccaaaggactatacactttataggaagc |
11130399 |
T |
|
| Q |
328 |
aattggttttgttgtggatggcagaaggcttccttgattattct |
371 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11130398 |
aattggttttgttgtggatggcagaaggcttccttgatcattct |
11130355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 361
Target Start/End: Original strand, 13396053 - 13396219
Alignment:
| Q |
195 |
gacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttcta |
294 |
Q |
| |
|
||||||||||| ||| ||||||||| ||| ||||| ||||| | ||| |||||| |||||||||| ||||||||||||||||| |||||||| || | |
|
|
| T |
13396053 |
gacatatggaacataccaaatgataatattatgccttctttgtttctgacatatcaacatcttccttcccatttgaaaagatgttttgcctattgctcga |
13396152 |
T |
|
| Q |
295 |
tttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcct |
361 |
Q |
| |
|
|||||||||||| || || || | ||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
13396153 |
tttttccaaagggctatccctttaataggaagaaattgattttgttgtggatggcagaaggcttcct |
13396219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 355
Target Start/End: Complemental strand, 11153524 - 11153418
Alignment:
| Q |
249 |
caatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatgg |
348 |
Q |
| |
|
||||||||||| ||||||||||||| | ||| | |||||| | |||||||| ||||| || |||||| ||||| | ||||||||||||||||||| |
|
|
| T |
11153524 |
caatatcttccctctcatttgaaaatgtatttttcttattgtccaatttttccgaaggactatgaacttgataggaagcagttggttttgttgtggatgg |
11153425 |
T |
|
| Q |
349 |
cagaagg |
355 |
Q |
| |
|
| ||||| |
|
|
| T |
11153424 |
ctgaagg |
11153418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 3913195 - 3913130
Alignment:
| Q |
240 |
ttgagttatcaatatcttccttctcatttgaaaagatgtttcgcctattgttctatttttccaaag |
305 |
Q |
| |
|
||||| ||||| ||||||||| ||| |||||| ||||||| || |||||||| |||||||||||| |
|
|
| T |
3913195 |
ttgagctatcactatcttcctgctcctttgaagcgatgttttgcttattgttcaatttttccaaag |
3913130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 61 - 382
Target Start/End: Complemental strand, 44957328 - 44957007
Alignment:
| Q |
61 |
aatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggt |
160 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
44957328 |
aatacccaaacctagaagagattggcaggaagattgctaaaaaatgtggtggattgccaatagctgccaaaacactgggaggacttatgcgttcaaagat |
44957229 |
T |
|
| Q |
161 |
agttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttcct |
260 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
44957228 |
agttgaaaaggagtggacttcaattctgaatagcgacatatggaactaacgaaatgatacaattttgcctgctttgcatttgagttatcaatatcttcct |
44957129 |
T |
|
| Q |
261 |
tctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcc |
360 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
44957128 |
tctcatttgaaaagatgtttcgcctattgttctatttttccaaagggttacctgcttgctaagaaaaaaatggttttgttatggatggcagaaggcttcc |
44957029 |
T |
|
| Q |
361 |
ttgattattctcaaggtgaaaa |
382 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
44957028 |
ttgatatttctcaaggtgaaaa |
44957007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 59 - 369
Target Start/End: Original strand, 11485466 - 11485776
Alignment:
| Q |
59 |
taaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaag |
158 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||| |||| |||||||| |||| ||||||| |
|
|
| T |
11485466 |
taaatacccaaacctagaagagattggcaggaagattgctagaaagtgtggtggattgccaattgctgcaaaagcacttggaggactaatgcattcaaag |
11485565 |
T |
|
| Q |
159 |
gtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttc |
258 |
Q |
| |
|
|||||||| |||||||||||| |||||||| | |||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
11485566 |
gtagttgaaaaggagtggactacaattctgcatagcgacatatggaacttaaaaaatgatacaatcctgccagctttgcatttgagttatcaatatcttc |
11485665 |
T |
|
| Q |
259 |
cttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggctt |
358 |
Q |
| |
|
| |||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11485666 |
cctctcatttaaaaagatgtttcgcctattgctcaatttttccaaaggattacccacttgataggaagaaattggttttgttgtggatggcagaaggctt |
11485765 |
T |
|
| Q |
359 |
ccttgattatt |
369 |
Q |
| |
|
||| ||||||| |
|
|
| T |
11485766 |
cctggattatt |
11485776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 81 - 376
Target Start/End: Original strand, 26907347 - 26907642
Alignment:
| Q |
81 |
attggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggactt |
180 |
Q |
| |
|
||||||||||||||||| | ||| ||||| |||||||| || ||||| ||||||||||||||| || | ||||||||||||| | |||||||||| |
|
|
| T |
26907347 |
attggcaggaagattgcaagaaagtgtggaggattgccaattgctgctaaaacactaggaggaattctacgttcaaaggtagacataacagagtggactt |
26907446 |
T |
|
| Q |
181 |
caattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgttt |
280 |
Q |
| |
|
||||| |||||| |||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
26907447 |
caattttgaacaacgacgtatggaacttacgaaatgataatattcttccagctttgcatttgagttatcaataccttccctctcatttgaaaagatgttt |
26907546 |
T |
|
| Q |
281 |
cgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|| |||||||| |||||||||||||||| |||||||| || || ||||||| ||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
26907547 |
tgcatattgttcactttttccaaaggattatccacttgatagaaagcaattggtcttgttgtggatggcagaaggcttccttgactgttctcaagg |
26907642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 81 - 376
Target Start/End: Complemental strand, 17852542 - 17852247
Alignment:
| Q |
81 |
attggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggactt |
180 |
Q |
| |
|
|||||||||||||| ||| ||| |||| || ||||| |||||||||||| |||| || ||||| ||||| || ||||||| ||| || ||||||||| |
|
|
| T |
17852542 |
attggcaggaagatatctagaaagtgtgatggcttgccaatagctgccaaagcactcggtggactaatgcgctcgaaggtagatgaaaatgagtggactg |
17852443 |
T |
|
| Q |
181 |
caattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaaaagatgttt |
280 |
Q |
| |
|
|||||||||| ||||| |||||| | |||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
17852442 |
caattctgaatagcgatatatggcaattacaaaatgataaaattctcccggctttgcatttgagttatcaatatcttccgtctcatttgaaaatatgttt |
17852343 |
T |
|
| Q |
281 |
cgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattctcaagg |
376 |
Q |
| |
|
|| |||||||| ||||| ||||||||||| || |||| ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
17852342 |
tgcatattgttcaattttctcaaaggattactcatttgataggaagaaattggttttgttgtggatggcagaaggattcctcgactattctcaagg |
17852247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 59 - 382
Target Start/End: Complemental strand, 31679374 - 31679051
Alignment:
| Q |
59 |
taaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaag |
158 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||||| ||||| ||| | |||||||| ||||||||||||||||| ||||||||| | || ||||| |
|
|
| T |
31679374 |
taaatacccaagcctagaagcaattggtaggaagattgcaaaaaagtgttgcggattgccaatagctgccaaaacacttggaggacttctacgctcaaaa |
31679275 |
T |
|
| Q |
159 |
gtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttc |
258 |
Q |
| |
|
|| | || ||| ||||||| | ||||| | |||| |||||||||||||| | ||||||||| |||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
31679274 |
gtggatgcgaaagagtggagtgcaattttaaacaatgacatatggaattttccaaatgataatgttctccctgccttgcttttgagttatcaatatcttc |
31679175 |
T |
|
| Q |
259 |
cttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggctt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| ||||| ||||||||||| || ||||| ||||| || |||||||| |||||||||| |||||||| |
|
|
| T |
31679174 |
cttctcatttgaaaacatgtttcgcttattgttcaattttcccaaaggattatcctcttgataggaagcaaatggttttgctgtggatggctgaaggctt |
31679075 |
T |
|
| Q |
359 |
ccttgattattctcaaggtgaaaa |
382 |
Q |
| |
|
|||||| |||||||||| ||||| |
|
|
| T |
31679074 |
ccttgaacattctcaaggagaaaa |
31679051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 128; Significance: 4e-66; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 63 - 374
Target Start/End: Complemental strand, 145576 - 145265
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||||| |
|
|
| T |
145576 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctgctaaaacactcggaggaattttgcgttcaaaggtag |
145477 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| |||||||| |||| | |||||||||| | | ||||||||||||||||| || |
|
|
| T |
145476 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgatacaattttacctgctttgcgtctaagttatcaatatcttccctc |
145377 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcctt |
362 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||||| |||||||| | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
145376 |
acatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttccta |
145277 |
T |
|
| Q |
363 |
gattattctcaa |
374 |
Q |
| |
|
|| |||||||| |
|
|
| T |
145276 |
gagcattctcaa |
145265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 63 - 361
Target Start/End: Complemental strand, 153881 - 153583
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||||| |
|
|
| T |
153881 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctgctaaaacactcggaggaattttgcgttcaaaggtag |
153782 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| |||||||| |||| | |||||||||| | | ||||||||||||||||| || |
|
|
| T |
153781 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgatacaattttacctgctttgcgtctaagttatcaatatcttccctc |
153682 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcct |
361 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||||| |||||||| | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
153681 |
acatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccacttgacaagaaggaattgattttgttatggatggcagaaggcttcct |
153583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 63 - 374
Target Start/End: Complemental strand, 135525 - 135214
Alignment:
| Q |
63 |
tacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtag |
162 |
Q |
| |
|
|||||||| |||||| | ||||| || |||||||| ||||| ||||| |||||||| |||||| | |||||||| |||||| || ||||||||||||||| |
|
|
| T |
135525 |
tacccaaatctagaagaaattggtagaaagattgccaaaaagtgtggtggattgcccatagctcctaaaacactcggaggaattttgcgttcaaaggtag |
135426 |
T |
|
| Q |
163 |
ttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttc |
262 |
Q |
| |
|
|| || ||||||||| ||||||| || || ||||||||||| |||| ||||||||| ||| | |||||||||| | | ||||||||||||||||| || |
|
|
| T |
135425 |
atgcaaaagagtggactgcaattctaaatagtgacatatggaacttaccaaatgataatattttacctgctttgcgtctaagttatcaatatcttccctc |
135326 |
T |
|
| Q |
263 |
tcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttcctt |
362 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||||| ||||| || | ||| ||||| ||||||| |||||||||||||||||||| |
|
|
| T |
135325 |
acatttgaaaagatgttttgcctattgctcaatttttccgaaggattttccactggacaagaaggaattgattttgttatggatggcagaaggcttccta |
135226 |
T |
|
| Q |
363 |
gattattctcaa |
374 |
Q |
| |
|
|| |||||||| |
|
|
| T |
135225 |
gagcattctcaa |
135214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 81 - 376
Target Start/End: Complemental strand, 58039 - 57735
Alignment:
| Q |
81 |
attggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaaggtagttgagaaggagtggactt |
180 |
Q |
| |
|
||||||||||||||||| | || |||||||||||||| |||||||| |||||||||||||||||| | | ||||||||||| | ||||||||| |
|
|
| T |
58039 |
attggcaggaagattgcaagaaggtgtgggggattgccaatagctgctaaaacactaggaggacttctcctttcaaaggtagacataacatagtggactt |
57940 |
T |
|
| Q |
181 |
caattct---------gaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaa |
271 |
Q |
| |
|
||||| | ||||||| ||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
57939 |
caattttttcaattttgaacagcagcatatggaacttgcgaaatgataatattcttcctgctttgcatttgagttatcaatatcttccctctcatttgaa |
57840 |
T |
|
| Q |
272 |
aagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgattattct |
371 |
Q |
| |
|
|||||| || || |||||||| |||||||||||||||| |||||| || | ||| |||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
57839 |
aagatgctttgcatattgttcaatttttccaaaggattgcccactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgattgttct |
57740 |
T |
|
| Q |
372 |
caagg |
376 |
Q |
| |
|
||||| |
|
|
| T |
57739 |
caagg |
57735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 376
Target Start/End: Complemental strand, 57035 - 56926
Alignment:
| Q |
267 |
ttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttgatt |
366 |
Q |
| |
|
||||||||||| || || |||||||| |||||||||||||||| |||||| || | ||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
57035 |
ttgaaaagatgctttgcatattgttcaatttttccaaaggattgcccactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgatt |
56936 |
T |
|
| Q |
367 |
attctcaagg |
376 |
Q |
| |
|
||||||||| |
|
|
| T |
56935 |
gttctcaagg |
56926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 364
Target Start/End: Original strand, 826330 - 826635
Alignment:
| Q |
59 |
taaatacccaaacctagaaaagattggcaggaagattgctaaaaaatgtgggggattgcctatagctgccaaaacactaggaggacttatgcgttcaaag |
158 |
Q |
| |
|
||||||||||| | ||||| ||||| | ||||||||| ||||| ||||| |||||||| |||||||||||||| |||||||| ||| || | |||||| |
|
|
| T |
826330 |
taaatacccaaccttagaagcaattgggaagaagattgcaaaaaagtgtggtggattgccaatagctgccaaaacgctaggagggcttttgagctcaaag |
826429 |
T |
|
| Q |
159 |
gtagttgagaaggagtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttc |
258 |
Q |
| |
|
|| || ||||||||||| ||| |||||||| |||||||||| ||| |||| |||| |||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
826430 |
ttaaatgcaaaggagtggaccgaaatcttgaacagcaacatatggaacataccaaataataacattctgcctgctttgcttttgagttatctataccttc |
826529 |
T |
|
| Q |
259 |
cttctcatttgaaaagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggctt |
358 |
Q |
| |
|
| |||||||||||||||||||||| |||||| || |||||||| |||| ||| || ||||| | || | ||||||||||||||||||||||||||||| |
|
|
| T |
826530 |
cctctcatttgaaaagatgtttcgtctattgctcaatttttcccaagggttatccccttgaaaaaaagcatttggttttgttgtggatggcagaaggctt |
826629 |
T |
|
| Q |
359 |
ccttga |
364 |
Q |
| |
|
|||||| |
|
|
| T |
826630 |
ccttga |
826635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 172 - 364
Target Start/End: Original strand, 29837181 - 29837373
Alignment:
| Q |
172 |
agtggacttcaattctgaacagcgacatatggaatttacgaaatgataaaattctgcctgctttgcatttgagttatcaatatcttccttctcatttgaa |
271 |
Q |
| |
|
|||||| | |||||||||| || ||||||||||| ||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| ||| ||||| |
|
|
| T |
29837181 |
agtggaatgcaattctgaatagtgacatatggaacttatcaaatgataaagtcatgcctgcattgcatttgagttatcaagatcttccttgtcacttgaa |
29837280 |
T |
|
| Q |
272 |
aagatgtttcgcctattgttctatttttccaaaggattacccacttgagaggaaaaaattggttttgttgtggatggcagaaggcttccttga |
364 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
29837281 |
aagatgtttcgcctattgttcaatttttccaaaggattatcaacttgataggaagcaattggttttgttgtggatggcagaaggattcattga |
29837373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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