View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9145_low_1 (Length: 260)
Name: NF9145_low_1
Description: NF9145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9145_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 23287425 - 23287654
Alignment:
| Q |
17 |
atgtctttcattggttggtagttatgtcagtttcccatttctatagctttgttgaagaatcagacagtgactgattctttgatctgtttttcctaggatg |
116 |
Q |
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| T |
23287425 |
atgtgtttcattggttgttagttatgtcagtttcccatttctatagctttgttgaagaatcagacagtgactgattctttgatctgtttttcctaggatg |
23287524 |
T |
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| Q |
117 |
ctcctgctggaatcagagcagaagaagtaagattttctgctttacctttttattatgtccaacaaattctagaaatatgtggaagtttcgattttcttta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23287525 |
ctcctgctggaatcagagcagaagaagtaagattttctgctttacctttttattatgtccaacaaattctagaaatatgtggaagtttcgattttcttta |
23287624 |
T |
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| Q |
217 |
acttttattttgtttgattggtgaagaatg |
246 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
23287625 |
acttttattttgtttgattggtgaagaatg |
23287654 |
T |
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