View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9147_low_2 (Length: 826)

Name: NF9147_low_2
Description: NF9147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9147_low_2
NF9147_low_2
[»] chr1 (71 HSPs)
chr1 (17-392)||(6694355-6694730)
chr1 (454-816)||(6693928-6694293)
chr1 (598-725)||(32550373-32550499)
chr1 (561-725)||(45360188-45360353)
chr1 (565-725)||(21620060-21620222)
chr1 (564-725)||(43069039-43069200)
chr1 (254-373)||(35980398-35980512)
chr1 (254-388)||(27507482-27507616)
chr1 (564-725)||(40125432-40125594)
chr1 (258-385)||(2490022-2490149)
chr1 (561-725)||(5555211-5555375)
chr1 (269-380)||(6248049-6248165)
chr1 (476-547)||(26344814-26344885)
chr1 (599-725)||(19565220-19565347)
chr1 (608-725)||(14236453-14236573)
chr1 (547-725)||(4643588-4643767)
chr1 (476-551)||(40095173-40095248)
chr1 (608-725)||(3656578-3656697)
chr1 (717-816)||(3656717-3656816)
chr1 (257-363)||(50153369-50153475)
chr1 (254-359)||(3935414-3935519)
chr1 (254-363)||(8165567-8165676)
chr1 (254-363)||(12973517-12973626)
chr1 (254-363)||(16062820-16062929)
chr1 (254-363)||(36203459-36203568)
chr1 (479-547)||(27507278-27507346)
chr1 (716-816)||(25473720-25473820)
chr1 (260-355)||(27350622-27350717)
chr1 (266-349)||(35980298-35980381)
chr1 (256-363)||(47984516-47984623)
chr1 (243-343)||(1161778-1161879)
chr1 (258-363)||(21685558-21685663)
chr1 (301-386)||(34914138-34914223)
chr1 (254-363)||(40095437-40095546)
chr1 (251-360)||(52380741-52380850)
chr1 (254-358)||(17989005-17989108)
chr1 (487-547)||(52380500-52380560)
chr1 (487-546)||(6248330-6248389)
chr1 (301-388)||(9330391-9330478)
chr1 (243-349)||(17651697-17651804)
chr1 (476-547)||(36782138-36782209)
chr1 (257-372)||(52828783-52828897)
chr1 (254-360)||(26345077-26345183)
chr1 (482-547)||(34914383-34914448)
chr1 (278-386)||(16537830-16537938)
chr1 (479-547)||(25559785-25559853)
chr1 (563-634)||(3027742-3027813)
chr1 (476-546)||(12973814-12973883)
chr1 (321-371)||(27770200-27770250)
chr1 (652-702)||(35371875-35371925)
chr1 (254-342)||(8268614-8268703)
chr1 (254-363)||(9962163-9962272)
chr1 (479-532)||(18310191-18310244)
chr1 (254-363)||(24629905-24630009)
chr1 (254-363)||(50471184-50471293)
chr1 (321-373)||(10847533-10847585)
chr1 (479-515)||(23474901-23474937)
chr1 (263-359)||(32910389-32910485)
chr1 (479-546)||(11073137-11073203)
chr1 (479-546)||(32910137-32910203)
chr1 (483-546)||(32937833-32937895)
chr1 (313-372)||(50952037-50952096)
chr1 (479-521)||(3935708-3935750)
chr1 (321-363)||(23475128-23475170)
chr1 (484-546)||(25865781-25865842)
chr1 (479-521)||(35375416-35375458)
chr1 (313-382)||(9250096-9250165)
chr1 (254-343)||(16529536-16529625)
chr1 (278-363)||(18309981-18310066)
chr1 (478-523)||(19051369-19051414)
chr1 (475-516)||(21685348-21685389)
[»] chr6 (33 HSPs)
chr6 (561-725)||(4653591-4653755)
chr6 (251-388)||(9686012-9686149)
chr6 (254-381)||(24644951-24645077)
chr6 (561-725)||(33756412-33756574)
chr6 (479-547)||(6400071-6400139)
chr6 (267-355)||(22413808-22413896)
chr6 (257-363)||(19135128-19135235)
chr6 (258-368)||(9909029-9909139)
chr6 (259-373)||(8064457-8064571)
chr6 (476-547)||(13092242-13092313)
chr6 (263-363)||(12108580-12108681)
chr6 (264-373)||(14940578-14940687)
chr6 (254-374)||(29048084-29048204)
chr6 (479-547)||(31945203-31945271)
chr6 (557-725)||(24765208-24765383)
chr6 (479-544)||(7169853-7169916)
chr6 (254-363)||(11417012-11417122)
chr6 (267-363)||(30752501-30752596)
chr6 (716-779)||(24765416-24765479)
chr6 (257-332)||(26645431-26645506)
chr6 (257-332)||(26751397-26751472)
chr6 (479-542)||(29048795-29048858)
chr6 (476-542)||(16971514-16971580)
chr6 (479-521)||(22414052-22414094)
chr6 (490-552)||(24644716-24644778)
chr6 (254-363)||(892357-892466)
chr6 (302-363)||(7170113-7170174)
chr6 (254-343)||(10590808-10590897)
chr6 (254-343)||(35040246-35040335)
chr6 (321-361)||(28632959-28632999)
chr6 (269-363)||(4562829-4562923)
chr6 (254-299)||(8135393-8135438)
chr6 (264-345)||(25006365-25006446)
[»] chr3 (64 HSPs)
chr3 (561-725)||(18996589-18996753)
chr3 (561-725)||(18999128-18999292)
chr3 (643-816)||(30260816-30260989)
chr3 (561-725)||(8082371-8082536)
chr3 (561-725)||(11685771-11685936)
chr3 (254-388)||(55467628-55467767)
chr3 (561-725)||(28246893-28247058)
chr3 (596-725)||(3777308-3777438)
chr3 (561-720)||(37609127-37609288)
chr3 (561-725)||(24373085-24373249)
chr3 (561-725)||(30801032-30801197)
chr3 (598-725)||(45572710-45572838)
chr3 (561-696)||(13696724-13696859)
chr3 (561-725)||(41957992-41958158)
chr3 (263-363)||(22257515-22257615)
chr3 (598-694)||(30260706-30260802)
chr3 (263-363)||(26758190-26758290)
chr3 (598-725)||(53151562-53151694)
chr3 (264-363)||(54121988-54122087)
chr3 (254-363)||(17144746-17144854)
chr3 (254-388)||(2566316-2566455)
chr3 (716-815)||(11685639-11685738)
chr3 (479-547)||(2566098-2566166)
chr3 (483-547)||(25919018-25919082)
chr3 (476-547)||(55467406-55467478)
chr3 (479-546)||(42362984-42363050)
chr3 (717-816)||(24373269-24373368)
chr3 (243-374)||(6004392-6004524)
chr3 (479-547)||(22256064-22256132)
chr3 (254-386)||(38651982-38652113)
chr3 (257-363)||(2832410-2832521)
chr3 (476-547)||(26758474-26758545)
chr3 (716-816)||(41958191-41958291)
chr3 (479-546)||(50578765-50578831)
chr3 (484-546)||(5640494-5640555)
chr3 (716-807)||(13696562-13696653)
chr3 (258-349)||(20846431-20846524)
chr3 (269-347)||(22473123-22473201)
chr3 (254-388)||(46253423-46253557)
chr3 (254-363)||(26291972-26292081)
chr3 (254-363)||(42363241-42363350)
chr3 (485-542)||(45629448-45629504)
chr3 (255-363)||(8557974-8558082)
chr3 (315-363)||(10481661-10481709)
chr3 (484-532)||(27054333-27054381)
chr3 (257-365)||(44661881-44661989)
chr3 (479-547)||(54122571-54122639)
chr3 (716-779)||(8082275-8082338)
chr3 (716-779)||(18996786-18996849)
chr3 (716-779)||(18999325-18999388)
chr3 (284-359)||(25919273-25919348)
chr3 (264-363)||(38680774-38680872)
chr3 (264-347)||(45629160-45629243)
chr3 (716-816)||(53151429-53151529)
chr3 (484-546)||(44651217-44651278)
chr3 (278-388)||(45915195-45915304)
chr3 (258-363)||(27054036-27054141)
chr3 (484-533)||(38651766-38651815)
chr3 (316-360)||(45699636-45699680)
chr3 (479-527)||(51660902-51660950)
chr3 (596-687)||(20307370-20307461)
chr3 (321-363)||(25465824-25465866)
chr3 (479-521)||(37045561-37045603)
chr3 (243-363)||(20038330-20038451)
[»] chr7 (56 HSPs)
chr7 (561-725)||(31293039-31293204)
chr7 (561-725)||(30586077-30586241)
chr7 (561-725)||(41743138-41743302)
chr7 (561-725)||(20372466-20372634)
chr7 (561-726)||(49141970-49142138)
chr7 (561-725)||(47266263-47266430)
chr7 (254-363)||(23032631-23032740)
chr7 (254-349)||(8568584-8568679)
chr7 (276-381)||(20334563-20334668)
chr7 (596-725)||(44079889-44080018)
chr7 (265-373)||(7685924-7686035)
chr7 (254-388)||(29628065-29628199)
chr7 (256-365)||(8118294-8118403)
chr7 (258-363)||(10338827-10338931)
chr7 (599-688)||(31577444-31577533)
chr7 (479-546)||(8568322-8568389)
chr7 (484-547)||(11834230-11834293)
chr7 (258-364)||(16535758-16535864)
chr7 (258-364)||(16629798-16629904)
chr7 (717-816)||(30586261-30586360)
chr7 (600-725)||(22916705-22916831)
chr7 (479-547)||(10338573-10338641)
chr7 (263-363)||(35820103-35820203)
chr7 (269-363)||(31287795-31287889)
chr7 (476-533)||(23729618-23729675)
chr7 (258-363)||(32942095-32942200)
chr7 (277-373)||(524872-524968)
chr7 (479-527)||(20334832-20334880)
chr7 (263-363)||(48642746-48642846)
chr7 (254-345)||(11834533-11834624)
chr7 (716-816)||(20372333-20372433)
chr7 (284-363)||(23729375-23729454)
chr7 (716-816)||(47266463-47266563)
chr7 (479-546)||(48643037-48643103)
chr7 (313-371)||(21237784-21237842)
chr7 (717-816)||(49141852-49141951)
chr7 (479-532)||(22298781-22298834)
chr7 (718-816)||(44080053-44080151)
chr7 (487-547)||(31287543-31287603)
chr7 (717-813)||(31293224-31293320)
chr7 (264-363)||(46147183-46147282)
chr7 (313-363)||(2308131-2308181)
chr7 (313-375)||(25007347-25007409)
chr7 (479-521)||(49012299-49012341)
chr7 (254-359)||(40848808-40848913)
chr7 (479-547)||(7697537-7697605)
chr7 (242-349)||(26215154-26215262)
chr7 (251-363)||(34750942-34751054)
chr7 (476-547)||(35819836-35819908)
chr7 (479-546)||(23675627-23675693)
chr7 (254-360)||(4153746-4153852)
chr7 (257-343)||(13852269-13852355)
chr7 (561-635)||(32031377-32031451)
chr7 (479-533)||(46147460-46147514)
chr7 (321-363)||(47646736-47646778)
chr7 (284-363)||(27111234-27111310)
[»] chr2 (33 HSPs)
chr2 (561-725)||(30518465-30518632)
chr2 (561-725)||(15805781-15805945)
chr2 (598-725)||(32597406-32597536)
chr2 (258-363)||(41461043-41461148)
chr2 (561-725)||(5614564-5614729)
chr2 (257-370)||(12041598-12041711)
chr2 (258-363)||(27301500-27301605)
chr2 (243-388)||(1330955-1331101)
chr2 (561-725)||(27641038-27641206)
chr2 (253-388)||(44085445-44085581)
chr2 (476-547)||(11678243-11678314)
chr2 (476-547)||(11695721-11695792)
chr2 (716-816)||(15805648-15805748)
chr2 (716-816)||(32597569-32597669)
chr2 (257-359)||(17762702-17762804)
chr2 (254-374)||(44979774-44979894)
chr2 (716-816)||(5614431-5614531)
chr2 (483-546)||(11377427-11377489)
chr2 (301-363)||(5862647-5862709)
chr2 (254-363)||(28790463-28790572)
chr2 (486-546)||(44085744-44085803)
chr2 (716-815)||(30518665-30518763)
chr2 (490-546)||(11051175-11051230)
chr2 (489-533)||(15320370-15320414)
chr2 (315-363)||(30759664-30759712)
chr2 (259-363)||(30761772-30761876)
chr2 (313-360)||(11678013-11678060)
chr2 (313-360)||(11695491-11695538)
chr2 (254-365)||(12884488-12884594)
chr2 (479-533)||(1331243-1331297)
chr2 (479-521)||(5862460-5862502)
chr2 (321-363)||(21480828-21480870)
chr2 (255-343)||(44035264-44035353)
[»] chr4 (64 HSPs)
chr4 (561-725)||(56080615-56080779)
chr4 (561-725)||(26695841-26696007)
chr4 (561-725)||(40591087-40591251)
chr4 (561-816)||(2623181-2623437)
chr4 (561-725)||(24072405-24072571)
chr4 (561-725)||(39502606-39502772)
chr4 (564-725)||(44506136-44506297)
chr4 (561-725)||(39499267-39499433)
chr4 (258-388)||(48293396-48293526)
chr4 (561-725)||(9033986-9034152)
chr4 (258-381)||(23449982-23450105)
chr4 (256-345)||(4642381-4642470)
chr4 (243-363)||(20986367-20986488)
chr4 (561-725)||(29051984-29052152)
chr4 (478-547)||(27743448-27743517)
chr4 (716-816)||(29051850-29051950)
chr4 (562-725)||(127968-128130)
chr4 (254-363)||(36106435-36106545)
chr4 (470-547)||(41325635-41325712)
chr4 (479-547)||(4642695-4642763)
chr4 (263-363)||(19753537-19753637)
chr4 (263-363)||(19786169-19786269)
chr4 (717-816)||(127849-127948)
chr4 (598-725)||(37995504-37995631)
chr4 (258-359)||(45464151-45464252)
chr4 (479-547)||(8484922-8484990)
chr4 (483-547)||(21069309-21069373)
chr4 (479-547)||(23449751-23449819)
chr4 (483-542)||(1564836-1564895)
chr4 (716-816)||(9033853-9033953)
chr4 (716-816)||(40590954-40591054)
chr4 (557-632)||(51790234-51790309)
chr4 (716-816)||(56080812-56080912)
chr4 (717-816)||(24072591-24072690)
chr4 (254-363)||(5122400-5122509)
chr4 (254-363)||(21069003-21069112)
chr4 (598-696)||(45620385-45620482)
chr4 (304-388)||(29232760-29232844)
chr4 (479-545)||(35014523-35014589)
chr4 (716-816)||(51790005-51790105)
chr4 (251-381)||(41325050-41325175)
chr4 (479-540)||(48653622-48653684)
chr4 (291-360)||(8484660-8484729)
chr4 (278-363)||(23120273-23120358)
chr4 (483-544)||(28148018-28148079)
chr4 (718-816)||(44506332-44506430)
chr4 (292-388)||(48602510-48602606)
chr4 (309-369)||(49640860-49640920)
chr4 (310-381)||(7784478-7784549)
chr4 (476-547)||(19753267-19753338)
chr4 (476-547)||(19786468-19786539)
chr4 (483-533)||(6102141-6102191)
chr4 (479-529)||(23625683-23625733)
chr4 (258-363)||(48338303-48338407)
chr4 (251-343)||(5262000-5262092)
chr4 (476-547)||(20986644-20986716)
chr4 (267-363)||(28147750-28147846)
chr4 (479-533)||(15724142-15724196)
chr4 (301-363)||(23625917-23625979)
chr4 (716-778)||(39502805-39502867)
chr4 (257-343)||(40806854-40806940)
chr4 (485-547)||(29233002-29233066)
chr4 (254-343)||(40900119-40900208)
chr4 (476-529)||(45150739-45150792)
[»] chr8 (50 HSPs)
chr8 (561-725)||(2734865-2735031)
chr8 (561-725)||(38526500-38526663)
chr8 (598-725)||(35563759-35563886)
chr8 (561-725)||(38567543-38567708)
chr8 (561-816)||(11661196-11661460)
chr8 (561-725)||(41486485-41486650)
chr8 (561-725)||(1197577-1197745)
chr8 (561-696)||(9686381-9686516)
chr8 (561-725)||(18916170-18916338)
chr8 (254-363)||(24682107-24682215)
chr8 (257-380)||(7428432-7428555)
chr8 (263-363)||(4785202-4785302)
chr8 (479-547)||(11219204-11219272)
chr8 (254-358)||(22811194-22811298)
chr8 (479-547)||(24681854-24681922)
chr8 (254-347)||(11218907-11219000)
chr8 (479-547)||(4785489-4785557)
chr8 (479-547)||(13325549-13325617)
chr8 (479-547)||(37162417-37162484)
chr8 (323-386)||(12193451-12193514)
chr8 (323-386)||(12437879-12437942)
chr8 (643-725)||(2001406-2001488)
chr8 (254-363)||(44336729-44336839)
chr8 (258-363)||(33565916-33566023)
chr8 (479-543)||(33566190-33566254)
chr8 (263-363)||(36340776-36340876)
chr8 (476-542)||(1271388-1271453)
chr8 (479-546)||(9012602-9012668)
chr8 (476-547)||(11017257-11017328)
chr8 (716-816)||(18916037-18916137)
chr8 (557-725)||(24697558-24697726)
chr8 (476-547)||(36340511-36340582)
chr8 (716-816)||(38526696-38526796)
chr8 (716-816)||(41486683-41486783)
chr8 (254-372)||(10661111-10661229)
chr8 (254-343)||(33068223-33068312)
chr8 (479-547)||(22810957-22811024)
chr8 (313-380)||(12660255-12660322)
chr8 (254-329)||(12883780-12883855)
chr8 (479-546)||(28441719-28441785)
chr8 (313-363)||(6591244-6591294)
chr8 (479-533)||(12193242-12193296)
chr8 (479-533)||(12437670-12437724)
chr8 (315-388)||(40436455-40436533)
chr8 (277-374)||(28073196-28073293)
chr8 (483-547)||(30253515-30253578)
chr8 (258-374)||(44672750-44672866)
chr8 (313-363)||(6616939-6616989)
chr8 (483-521)||(41346164-41346202)
chr8 (652-689)||(43596201-43596238)
[»] chr5 (47 HSPs)
chr5 (561-725)||(22213282-22213447)
chr5 (561-725)||(25897946-25898112)
chr5 (561-725)||(36275551-36275717)
chr5 (564-725)||(30493906-30494069)
chr5 (564-725)||(30534249-30534412)
chr5 (557-723)||(26945674-26945840)
chr5 (557-723)||(26674069-26674234)
chr5 (600-725)||(42394055-42394179)
chr5 (256-363)||(22747589-22747695)
chr5 (254-363)||(27572061-27572170)
chr5 (267-388)||(36567692-36567813)
chr5 (479-547)||(25495339-25495407)
chr5 (17-205)||(29411679-29411869)
chr5 (263-374)||(40884297-40884408)
chr5 (254-363)||(35240840-35240949)
chr5 (254-329)||(10090263-10090338)
chr5 (484-531)||(10090484-10090531)
chr5 (483-546)||(34881087-34881149)
chr5 (476-547)||(36567961-36568032)
chr5 (258-388)||(2588936-2589066)
chr5 (608-725)||(13946403-13946526)
chr5 (253-363)||(25495041-25495151)
chr5 (263-363)||(17132106-17132206)
chr5 (476-547)||(17131841-17131912)
chr5 (476-547)||(32244137-32244208)
chr5 (321-372)||(36760138-36760189)
chr5 (717-816)||(30493787-30493886)
chr5 (717-816)||(30534130-30534229)
chr5 (476-538)||(41455119-41455181)
chr5 (598-688)||(11740587-11740677)
chr5 (257-381)||(20191972-20192101)
chr5 (254-359)||(40331510-40331615)
chr5 (501-545)||(28224628-28224672)
chr5 (263-359)||(32244396-32244492)
chr5 (476-547)||(35240585-35240656)
chr5 (717-816)||(26674256-26674355)
chr5 (717-816)||(26945862-26945961)
chr5 (479-533)||(33792898-33792952)
chr5 (487-533)||(40692714-40692760)
chr5 (313-363)||(41454880-41454930)
chr5 (313-381)||(2422823-2422891)
chr5 (479-546)||(14652708-14652774)
chr5 (487-538)||(34087667-34087718)
chr5 (264-363)||(40692463-40692560)
chr5 (321-363)||(6633344-6633386)
chr5 (484-546)||(18432344-18432405)
chr5 (254-363)||(14652410-14652519)
[»] scaffold0051 (2 HSPs)
scaffold0051 (561-725)||(59032-59199)
scaffold0051 (717-815)||(59219-59317)
[»] scaffold0015 (2 HSPs)
scaffold0015 (263-363)||(62366-62466)
scaffold0015 (476-547)||(62660-62731)
[»] scaffold0664 (1 HSPs)
scaffold0664 (254-363)||(5953-6062)
[»] scaffold0688 (2 HSPs)
scaffold0688 (257-350)||(1119-1211)
scaffold0688 (257-350)||(7688-7780)
[»] scaffold0204 (2 HSPs)
scaffold0204 (258-363)||(25825-25929)
scaffold0204 (254-363)||(14480-14589)
[»] scaffold0470 (1 HSPs)
scaffold0470 (313-363)||(6257-6307)
[»] scaffold0210 (2 HSPs)
scaffold0210 (485-547)||(20398-20460)
scaffold0210 (485-547)||(28290-28352)


Alignment Details
Target: chr1 (Bit Score: 320; Significance: 1e-180; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 17 - 392
Target Start/End: Complemental strand, 6694730 - 6694355
Alignment:
Q  17 aaaacccagttgggttggcttgcatttgaagatacacaaacctagtaaataggtggtacaatgaaagtaagtactatccttgttattttattacgcggta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||    
T  6694730 aaaacccagttgggttggcttgcatttgaagatacacaaacctagtaaataggtggtacaatgaaagtaagtactatccttattgttttattacgctgta 6694631  T
Q  117 ccaaaataaaagtaatggttaagatccaaattggcattaaaaaggaatgaataaattgatggtgaggattgctgttaagtaataaaactctcttttctgc 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6694630 ccaaaataaaagtaatggttaaaatccaaattggcattaaaaaggaatgaataaattgatggtgaggattgctgttaagtaataaaactctcttttttgc 6694531  T
Q  217 acttgatttttgtggttaccctacctgggtgtttcgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggt 316  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6694530 acttgacttttgtggttaccctacctgggtgtttcggtgtggtttagttcggttttgagactaaacatcatccgaaccgcaagttaaataagtatgtggt 6694431  T
Q  317 ttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttggtactg 392  Q
    |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6694430 ttgttttgtttaggttgacttttaaaataaaatttgaaccaaaccaatgcggtttggattggataagttggtactg 6694355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 454 - 816
Target Start/End: Complemental strand, 6694293 - 6693928
Alignment:
Q  454 cacaacatattttcagcaatgttttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaagggtgct 553  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  6694293 cacaacatattttcagcaatgttttaaatgcggagaaaaagtaatcctattttgtaagaaatacaaaagactaaaatttttatcattctctaagggcgct 6694194  T
Q  554 tgctttggggaaacacaaactattcccatgaataaacaacc--tgagaatgaaaatatgaaaatttgattcgtggg-tatttgttnnnnnnngtgtttag 650  Q
    ||||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||       ||||||||    
T  6694193 tgctttggggaaacacaaattattcccaggaataaacaacccctgagaatgaaaatatgaaaatttgattcgtggggtatttgttaaaaaaagtgtttag 6694094  T
Q  651 taaataacttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaataatgaaaggtatgagaagttacttc 750  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6694093 caaataacttgacattcctgaaaaaattggaagttacaatttttttaaaaaatctatgcataatatcatggaaataatgaaaggtatgagaagttacttc 6693994  T
Q  751 attcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||| ||||||||| |||||||       ||||||||||||||||||||||||||||||    
T  6693993 attcacatgaatttttatacctaggaatatttttttcacaacctcataacaaacatgagtataatc 6693928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 598 - 725
Target Start/End: Complemental strand, 32550499 - 32550373
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttta 697  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||| | ||||||||||||||||||| |||||||||||||||||| |||||||    
T  32550499 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaattttttta 32550400  T
Q  698 aaaaatctatgcataatatcatgggaat 725  Q
     |||||||||||||||||||||||||||    
T  32550399 -aaaatctatgcataatatcatgggaat 32550373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 45360188 - 45360353
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||||  |||||||||||| |||||||||||| ||||||||||||       |||||| | |||||||||    
T  45360188 gggaaacacaaattattcccaggaataacatacctcggaatgaaaatatcaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 45360287  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  45360288 gacattcctggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 45360353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 565 - 725
Target Start/End: Original strand, 21620060 - 21620222
Alignment:
Q  565 aacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnng-tgtttagtaaataacttgac 663  Q
    |||||||| |||||||| ||||||   ||||| ||||||||||||||||||||||||| ||||||||||||       | ||||||| ||||||||||||    
T  21620060 aacacaaattattcccaggaataacatacctgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaaggtgtttagcaaataacttgac 21620159  T
Q  664 attcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||  ||||||||||||||||||  ||||||  ||||||||| |||||||||||||||||    
T  21620160 attcctagaaaaattggaagttacaattttttttttaaaatctatacataatatcatgggaat 21620222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 564 - 725
Target Start/End: Complemental strand, 43069200 - 43069039
Alignment:
Q  564 aaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgac 663  Q
    ||||||||| |||||||| ||||||   ||  | ||||||||||||||||||||||||| ||||||||||||        ||||| | |||||| |||||    
T  43069200 aaacacaaattattcccaggaataacatactcgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaaatgtttggcaaataatttgac 43069101  T
Q  664 attcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||| |||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  43069100 atttctgaaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 43069039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 254 - 373
Target Start/End: Complemental strand, 35980512 - 35980398
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||||||||||||        
T  35980512 tgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttttaaaataaaat---- 35980417  T
Q  354 accaaaccaatgcggtttgg 373  Q
     |||||||||||||||||||    
T  35980416 -ccaaaccaatgcggtttgg 35980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 27507616 - 27507482
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||   |||| ||| ||||| |||||||||||||||||||   |    
T  27507616 tgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttcggttgacttttaaaataaaatccaa 27507517  T
Q  354 accaaaccaatgcggtttggaatggatcagttggt 388  Q
    | ||||||||||  ||||||| |||||||||||||    
T  27507516 atcaaaccaatgatgtttggattggatcagttggt 27507482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 564 - 725
Target Start/End: Original strand, 40125432 - 40125594
Alignment:
Q  564 aaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgac 663  Q
    |||||||||||||||||| ||| ||   ||  | ||||||||||||||||||||||||| ||||||||||||       |||||| | | ||||||||||    
T  40125432 aaacacaaactattcccaggaacaacatactcgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcatataacttgac 40125531  T
Q  664 attcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    ||||||| |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  40125532 attcctggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 40125594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 258 - 385
Target Start/End: Complemental strand, 2490149 - 2490022
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| ||||| ||||||| ||||| || |||||||||||||| |||||||||||| | |||| ||||||||  |||||||||||||||||||| ||||||    
T  2490149 gtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagtatgcgatttggtttggttcagttgacttttaaaataaaattcgaacca 2490050  T
Q  358 aaccaatgcggtttggaatggatcagtt 385  Q
    ||||||||  ||||| | ||||||||||    
T  2490049 aaccaatgtagtttgaattggatcagtt 2490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 5555211 - 5555375
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||| ||  |||||   ||| | |||||||||||| |||||||||||| ||| ||||||||       |||||| |  ||||||||    
T  5555211 gggaaacacaaattattctcagaaataacatacccgggaatgaaaatataaaaatttgattcttggatatttgttaaaaaaagtgtttggcgaataactt 5555310  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||| ||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  5555311 gacatttctggaaaaattggaagttacaatttttttttaaaatctatgcataatatcatgggaat 5555375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 269 - 380
Target Start/End: Original strand, 6248049 - 6248165
Alignment:
Q  269 ttttgagactaaacgtcatccgaaccgcaagttaaataagtatg-----tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||||||| ||||||| |||||||||  |||||||||||     ||||||| ||||||| | |||||||||||||||||||||||| ||||||||    
T  6248049 ttttgagactaaaagtcatccaaaccgcaagaaaaataagtatgcggtttggtttggtttggtttggttgacttttaaaataaaatttgaatcaaaccaa 6248148  T
Q  364 tgcggtttggaatggat 380  Q
    ||||||||||| |||||    
T  6248149 tgcggtttggattggat 6248165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 26344885 - 26344814
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  26344885 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaagactaatttttttatcattctctaag 26344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 725
Target Start/End: Original strand, 19565220 - 19565347
Alignment:
Q  599 aatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaa 698  Q
    |||||||||||||||||||||||| ||||||||| ||       |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||      
T  19565220 aatgaaaatatgaaaatttgattcttgggtatttcttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaattttttttt 19565319  T
Q  699 a-aaatctatgcataatatcatgggaat 725  Q
      |||| |||||||||||||||||||||    
T  19565320 ttaaatttatgcataatatcatgggaat 19565347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 608 - 725
Target Start/End: Original strand, 14236453 - 14236573
Alignment:
Q  608 atgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaa---aaaatc 704  Q
    ||||||||||||||| ||||||||||||       |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||     ||||||    
T  14236453 atgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaattttttttttttaaaatc 14236552  T
Q  705 tatgcataatatcatgggaat 725  Q
    |||||||||||||||||||||    
T  14236553 tatgcataatatcatgggaat 14236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 547 - 725
Target Start/End: Original strand, 4643588 - 4643767
Alignment:
Q  547 gggtgcttgctttggggaaacacaaactattcccatgaataa-acaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtg 645  Q
    ||||| ||| || ||||||||||||| |||||||| |||||| | | || | ||||||||||||||||||||||||| ||||||||||||       |||    
T  4643588 gggtgtttgtttcggggaaacacaaattattcccaagaataacatatccag-gaatgaaaatatgaaaatttgattcatgggtatttgttaaaaaaagtg 4643686  T
Q  646 tttagtaaataacttgacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||| |  ||||| ||||||||||| | |||||||||||||||||  ||||||||||||  |||| | ||||||||||||||    
T  4643687 tttggcgaataatttgacattcctaagaaaattggaagttacaattttttttaaaaaaattatgtagaatatcatgggaat 4643767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 551
Target Start/End: Complemental strand, 40095248 - 40095173
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaagggtg 551  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  40095248 tttaaacgcggacaaaatgtaattctattttgtaagaaatacaaaagactaaaaagtttatcattctctaagggtg 40095173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 608 - 725
Target Start/End: Original strand, 3656578 - 3656697
Alignment:
Q  608 atgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaaa--aaatct 705  Q
    ||||||||||||||| ||||| ||||||       |||||| | ||||||||||||||||||| |||||||| ||||||||| ||||||     ||||||    
T  3656578 atgaaaatttgattcttgggtgtttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattgaaagttacaattttttttttttaaatct 3656677  T
Q  706 atgcataatatcatgggaat 725  Q
    ||||||||||||||||||||    
T  3656678 atgcataatatcatgggaat 3656697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 3656717 - 3656816
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||||||||||       | ||||||||||||||||||  ||||||||    
T  3656717 catgggaataatggaagttatgagaagttactccattcccatgaacctttatacccaggaatatttttttctcaacctcataacaaacattggtataatc 3656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 50153369 - 50153475
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    |||||| ||||||||||||  |||| || ||| |||| ||||| |||| || ||||||||||| ||| ||||| |||||||||||||||||||  |||||    
T  50153369 ggtttaattcggttttgaggttaaaagttatctgaactgcaagataaaaaaatatgtggtttgattttgttcggttgacttttaaaataaaatccgaacc 50153468  T
Q  357 aaaccaa 363  Q
    |||||||    
T  50153469 aaaccaa 50153475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 3935414 - 3935519
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||| ||||||||||||| |||||  |||||| ||| ||||||||||||  || || |||| |||| |||||||||||||||||||  ||    
T  3935414 tgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagtatgcagtatggtttgattcggttgacttttaaaataaaatccga 3935513  T
Q  354 accaaa 359  Q
    ||||||    
T  3935514 accaaa 3935519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 8165676 - 8165567
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||||||||||| |||||||   ||||  |||||||||||||| | |||| ||| ||| |||||| || |||||| |||||||| |||||||||| |||    
T  8165676 tgcggtttagttcagttttgaaggtaaaaatcatccgaaccgcaggataaagaagcatgcggtttggttcggttcggttgactttaaaaataaaatctga 8165577  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  8165576 accaaaccaa 8165567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 12973517 - 12973626
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||||||||||  || || ||||||||||||||||| ||||||| |||| |||||| ||||||| | |||| ||| ||||||||||  ||    
T  12973517 tgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttggttgattttgaaaataaaatccga 12973616  T
Q  354 accaaaccaa 363  Q
    | ||||||||    
T  12973617 atcaaaccaa 12973626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 16062820 - 16062929
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||| ||||  ||||  |||||| ||| | ||||||||| ||||||| |||| |||  |||||||||||||||||||| ||    
T  16062820 tgcggtttggttcggttttgagaataaaattcatttgaaccgtaagattaataagtatctggtttggtttgattcagttgacttttaaaataaaattcga 16062919  T
Q  354 accaaaccaa 363  Q
    | ||||||||    
T  16062920 atcaaaccaa 16062929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 36203568 - 36203459
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||| ||| |||||||||||||  |||| ||||||| ||||||||| |||| ||| ||| |||||| ||||||||| ||||||||||||||| |||  ||    
T  36203568 tgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttcggttgacttttaaaatacaatccga 36203469  T
Q  354 accaaaccaa 363  Q
    ||| ||||||    
T  36203468 accgaaccaa 36203459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 27507346 - 27507278
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||| |||||||||||||||||||||| |||||||||  ||||||||||| ||||||| |||||    
T  27507346 aaacgtggataaaaagtaatcctattttgtaaaaaatacaaaggactaaaattttaatcattccctaag 27507278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 25473820 - 25473720
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  25473820 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 25473721  T
Q  816 c 816  Q
    |    
T  25473720 c 25473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 27350622 - 27350717
Alignment:
Q  260 ttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||||||| |||| ||||||||  |||||||| | | ||  |||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  27350622 ttagttcgattttaagactaaaaatcatccgatctgtaaaataaataagtatgcggtttggtttggttcaattgacttttaaaataaaattcgaac 27350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 35980381 - 35980298
Alignment:
Q  266 cggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaat 349  Q
    ||||||| || ||||| ||||||||||||||||| |||| ||| |||||||||| ||| ||| | |||||||||||||||||||    
T  35980381 cggtttttaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgtttggttgacttttaaaataaaat 35980298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 47984623 - 47984516
Alignment:
Q  256 cggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||||| ||||||||||||||||||| ||||| | ||  ||||| |||| ||  |||  ||||| ||||||| || |||||||||||||||||| |||||    
T  47984623 cggtttggttcggttttgagactaaaagtcattcaaattgcaagataaaaaaacatgcagtttgatttggtttgactgacttttaaaataaaatatgaac 47984524  T
Q  356 caaaccaa 363  Q
    ||||||||    
T  47984523 caaaccaa 47984516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 1161879 - 1161778
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| ||||||||||| |||||||||||||   ||| |||||||||||||| || |||| ||| |||||||||| ||||||| | |||| ||||||    
T  1161879 gggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgatttttaa 1161780  T
Q  342 aa 343  Q
    ||    
T  1161779 aa 1161778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 21685663 - 21685558
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||| || ||||| |||||| |||||||||| || | | | ||| |||||| ||||||||  |||||||||||||||||||  ||||||    
T  21685663 gtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttttaaaataaaatcagaacca 21685564  T
Q  358 aaccaa 363  Q
    ||||||    
T  21685563 aaccaa 21685558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 386
Target Start/End: Original strand, 34914138 - 34914223
Alignment:
Q  301 taaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttg 386  Q
    |||| |||||||  ||||| |||| || | |||||||||||||||||||| |||||||||||||| |||||||| |||||| ||||    
T  34914138 taaaaaagtatgcagtttggtttgctttggttgacttttaaaataaaattcgaaccaaaccaatgtggtttggattggatcggttg 34914223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 40095546 - 40095437
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| || |||||||||||||| ||||||| |||| ||||||  ||| |||| || | ||||||||||||| |  |    
T  40095546 tgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatttttaaaataaaactcaa 40095447  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  40095446 accaaaccaa 40095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 52380850 - 52380741
Alignment:
Q  251 cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    ||||| ||||| || |||| ||||| ||||| |||||  |||| ||||| || |||| |||| |||||| ||| ||||| |||||||||||||||| |||    
T  52380850 cgatgtggtttggtacggtattgaggctaaaagtcatatgaactgcaagatatataactatgcggtttggtttagttcggttgacttttaaaataagatt 52380751  T
Q  351 tgaaccaaac 360  Q
    ||||||||||    
T  52380750 tgaaccaaac 52380741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 17989005 - 17989108
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||||||||||| ||||| |||||| ||| |||||| |||| ||  ||  |||||| ||||||||| |||||||||||||||||||  ||    
T  17989005 tgcggtttggttcggttttgaggctaaaagtcatctgaatcgcaagataaa-aaccatacggtttgatttggttcggttgacttttaaaataaaatccga 17989103  T
Q  354 accaa 358  Q
    |||||    
T  17989104 accaa 17989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 52380560 - 52380500
Alignment:
Q  487 acaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||| || |||||||||||||||||| ||||||| |||||| ||||||||||    
T  52380560 acaaaaagtaatcatagtttgtaagaaatacaaaagactaaaagttttatgattctctaag 52380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 546
Target Start/End: Original strand, 6248330 - 6248389
Alignment:
Q  487 acaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||||| |||||||||||||||| |||| |||||| |||||||| ||||||||    
T  6248330 acaaaaagtaatcatattttgtaagaaatagaaaagactaaattttttatctttctctaa 6248389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 388
Target Start/End: Original strand, 9330391 - 9330478
Alignment:
Q  301 taaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||||| | | |||| ||||||||||| ||||||  | |||||||||||    
T  9330391 taaaaaagtatgtggtttggtttagttcggttgacttttaaaatacattctgaatcaaaccaatgcagtttgggtttgatcagttggt 9330478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 17651697 - 17651804
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| |||||||||||  |||||||||||| ||||| ||||| ||||  | ||| |||| ||| ||| |||||| ||| ||||| |||||||||||    
T  17651697 gggtgtttgcgatgcggtttgattcggttttgaggctaaaagtcattcgaattgtaaggtaaaaaagcatgcggtttgattttgttcggttgacttttaa 17651796  T
Q  342 aataaaat 349  Q
    ||||||||    
T  17651797 aataaaat 17651804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 36782209 - 36782138
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||  ||| ||||||||||||| ||||||||||||| |||| |||||| || |||||||||||||||    
T  36782209 tttaaacgcagacgaaaagtaatcctactttgtaagaaatataaaagactaaatttgttatcattctctaag 36782138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 52828783 - 52828897
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||| |||||||||| ||  |||| |||||| |||||||||| |||  ||| |||  ||||| |||||| || ||||||||||||||||||| ||||||    
T  52828783 ggtttggttcggttttaaggttaaaggtcatctgaaccgcaagataacaaagcatgctgtttggtttggt-cggttgacttttaaaataaaatctgaacc 52828881  T
Q  357 aaaccaatgcggtttg 372  Q
    ||||||| ||| ||||    
T  52828882 aaaccaacgcgatttg 52828897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 26345183 - 26345077
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||||||||||| ||||||||  || | ||||||||||||  ||  |||| ||||||| |||||  |||| |||| |||||||||||||||||||  ||    
T  26345183 tgcggtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagtatgcggtttagtttgattcggttgacttttaaaataaaatccga 26345084  T
Q  354 accaaac 360  Q
    |||||||    
T  26345083 accaaac 26345077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 482 - 547
Target Start/End: Original strand, 34914383 - 34914448
Alignment:
Q  482 cgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||| |||||||||||| | ||||||||||||| |||| |||||| ||||||| ||||||||||    
T  34914383 cgtggataaaaagtaatccaactttgtaagaaatataaaagactaaattttttattattctctaag 34914448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 278 - 386
Target Start/End: Complemental strand, 16537938 - 16537830
Alignment:
Q  278 taaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatg 377  Q
    |||| ||||||  ||||||||| |||| ||  ||| |||||| ||||||| | || ||||||||||||||||  ||||||||||||||| ||||||  ||    
T  16537938 taaaagtcatctaaaccgcaagataaaaaaacatgcggtttgatttggtttggttcacttttaaaataaaatccgaaccaaaccaatgcagtttgggttg 16537839  T
Q  378 gatcagttg 386  Q
    |||| ||||    
T  16537838 gatctgttg 16537830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 25559853 - 25559785
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||| | |||||||||||||||||| || |   |||||||||||| |||||    
T  25559853 aaacgtggacaaaaagtaatccaactttgtaagaaatacaaaagacaattttttttatcattcgctaag 25559785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 563 - 634
Target Start/End: Original strand, 3027742 - 3027813
Alignment:
Q  563 gaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgt 634  Q
    |||||||||| ||||| || ||||||   ||||  ||||||||||||||||||||||||| |||||||||||    
T  3027742 gaaacacaaattattctcaggaataacttacctcggaatgaaaatatgaaaatttgattcctgggtatttgt 3027813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 12973814 - 12973883
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||||| ||||||||||||||| |||||  || ||||||||||| |||||| ||||||||||| |||||    
T  12973814 tttaaacgcggacaaaaagtaatcatattta-taggaaatacaaaagactaaattttttatcattatctaa 12973883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 371
Target Start/End: Complemental strand, 27770250 - 27770200
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggttt 371  Q
    |||||||||||| ||||||||||||||| | |||||||||||||| |||||    
T  27770250 tttggttcgattaacttttaaaataaaaatcgaaccaaaccaatgtggttt 27770200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 702
Target Start/End: Complemental strand, 35371925 - 35371875
Alignment:
Q  652 aaataacttgacattcctgaaaaaattggaagttacaacttttttaaaaaa 702  Q
    |||||| ||| ||||||||||||||||||||||||||  ||||||||||||    
T  35371925 aaataagttggcattcctgaaaaaattggaagttacattttttttaaaaaa 35371875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 8268614 - 8268703
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaa-taagtatgtggtttgttttggttcgattgacttttaaa 342  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||| ||||  || |||| || ||| ||||||| | ||||||||||||    
T  8268614 tgcggtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttttaaa 8268703  T

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Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 9962272 - 9962163
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||| ||||||| |||||| |||||||||| |||||| |||| ||  | | |||||  |||| || | ||||||||| ||||||||||  |    
T  9962272 tgcggtttggttcagttttgaaactaaaagtcatccgaatcgcaagataaaaaaacaggcggttttgtttgatttggttgacttttcaaataaaattcaa 9962173  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  9962172 accaaaccaa 9962163  T

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Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 18310191 - 18310244
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaattt 532  Q
    ||||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||    
T  18310191 aaacgtgaacaaaaagtaatcatattttgtaagaaatataaaagactaagattt 18310244  T

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Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 24629905 - 24630009
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| | | ||||||||||||||| |||| || || |||| | |||| ||| |||||||||| |||||||     ||||||||||||||||| | |    
T  24629905 tgcggtttgggttggttttgagactaaaagtcagccaaatcgcatgataaaaaagcatgtggtttggtttggtt-----gacttttaaaataaaatctta 24629999  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  24630000 accaaaccaa 24630009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 50471184 - 50471293
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||| || ||||| ||||||  ||||| ||||||||||||| ||  |||| ||||||| |||||| ||||||||  |||  ||||||||||||||   |    
T  50471184 tgcgggtttgttcgattttgatgctaaaagtcatccgaaccgtaaaataaaaaagtatgcggtttggtttggttcagttgcattttaaaataaaatccaa 50471283  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  50471284 accaaaccaa 50471293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 10847585 - 10847533
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttgg 373  Q
    ||||||||| |||||||| ||||||||||  |||||||||||||| |||||||    
T  10847585 tttggttcggttgactttgaaaataaaatcagaaccaaaccaatgtggtttgg 10847533  T

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Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 23474937 - 23474901
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaat 515  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23474937 aaacgtggacaaaaactaatcctattttgtaagaaat 23474901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 32910485 - 32910389
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaa 359  Q
    |||||||||||||  |||| ||||||| ||| ||||| |||| ||  |||  ||||| ||||||||| |||||||| |||||| ||| |||||||||    
T  32910485 gttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttcggttgactttaaaaatagaatctgaaccaaa 32910389  T

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Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 11073203 - 11073137
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||| ||||||||| | |||||||||||||||||||| ||||| ||||| | | ||||||||||||||    
T  11073203 aaacatggacaaaacgaaatcctattttgtaagaaatgcaaaagactaaga-tgttatcattctctaa 11073137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 32910203 - 32910137
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||| |||||||||  ||||||||||||||||||||| ||||| ||||| | |||| |||||||||||    
T  32910203 aaacatggacaaaacataatcctattttgtaagaaatgcaaaagactaaga-ttttctcattctctaa 32910137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 32937895 - 32937833
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||| ||||||||||||||| ||||||||||  |||  ||||||| ||||||||||||||||    
T  32937895 gtggacgaaaagtaatcctattatgtaagaaatgtaaaggactaaaa-ttttatcattctctaa 32937833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 50952096 - 50952037
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttg 372  Q
    ||||||| ||||||||| ||||||||||||||||||   ||| ||||||| |||||||||    
T  50952096 tggtttggtttggttcggttgacttttaaaataaaacccgaatcaaaccattgcggtttg 50952037  T

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Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 3935708 - 3935750
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    |||| |||||||||| ||||| |||||||||||||||||||||    
T  3935708 aaacttggacaaaaaataatcttattttgtaagaaatacaaaa 3935750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 23475170 - 23475128
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||| |||| |||||||||||||||||||| |||||||    
T  23475170 tttggttcggttgatttttaaaataaaatttgaacaaaaccaa 23475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 484 - 546
Target Start/End: Complemental strand, 25865842 - 25865781
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||||| |||||||||||||| || |||||  |||| ||||||| ||||||||||||||||    
T  25865842 tggacaaagagtaatcctattttttatgaaatgaaaaagactaaaa-ttttatcattctctaa 25865781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 35375416 - 35375458
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||    
T  35375416 aaacgtgaacaaaaagtaatcatattttataagaaatacaaaa 35375458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 9250165 - 9250096
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatca 382  Q
    ||||||| ||| || || ||||||||||||||| |||||||| ||||| ||||| ||||||  |||||||    
T  9250165 tggtttggttttgtccggttgacttttaaaatacaatttgaatcaaactaatgcagtttgggttggatca 9250096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 16529625 - 16529536
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||| |||||||||||||  |||| ||||||| ||| || || |||| ||| |||  ||||| ||||||||| |||| ||||||||    
T  16529625 tgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgatttttaaaa 16529536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 18309981 - 18310066
Alignment:
Q  278 taaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||| ||||||||||||||| | |||| ||  ||||| |||| ||||||| | |||| ||||||||||||| |  |||||||||||    
T  18309981 taaaagtcatccgaaccgcatgataaaaaaacatgtgatttggtttggtttggttgaattttaaaataaaactcaaaccaaaccaa 18310066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 19051369 - 19051414
Alignment:
Q  478 taaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaa 523  Q
    |||| ||||||||||||||||| |||| |||||||||| |||||||    
T  19051369 taaaggtggacaaaaagtaatcttattatgtaagaaatgcaaaaaa 19051414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 21685389 - 21685348
Alignment:
Q  475 ttttaaacgtggacaaaaagtaatcctattttgtaagaaata 516  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  21685389 ttttaaacgtgaacataaagtaatcatattttgtaagaaata 21685348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 3e-44; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 4653591 - 4653755
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| ||||||||||||||||||||||||||| | ||||||||||       |||||| | |||||||||    
T  4653591 gggaaacacaaattattcccaggaataacatacccgagaatgaaaatatgaaaatttgattcttaggtatttgttaaaaaaagtgtttggcaaataactt 4653690  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  4653691 gacattcctgaaaaaattggaagttacaatttttttttaaaatctatgcataatatcatgggaat 4653755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 9686012 - 9686149
Alignment:
Q  251 cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    |||||| |||| ||||| ||||||| || || |||||| |||||||||| |||||||||||| |||||| ||||||||| || ||||||||||||||||     
T  9686012 cgatgcagtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaataaaatc 9686111  T
Q  351 tgaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
     ||||||||||||||||||||||| |||||||||||||    
T  9686112 cgaaccaaaccaatgcggtttggattggatcagttggt 9686149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 254 - 381
Target Start/End: Complemental strand, 24645077 - 24644951
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||| |||||||  |||| ||||||||||||||||| |||||||||||| |||||| |||| |||| |||||||||||||||||||   |    
T  24645077 tgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttgattcg-ttgacttttaaaataaaatccaa 24644979  T
Q  354 accaaaccaatgcggtttggaatggatc 381  Q
    ||||||||||||| ||||||| ||||||    
T  24644978 accaaaccaatgcagtttggattggatc 24644951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 33756412 - 33756574
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||| ||| ||||||   | | | |||||||||||||||||||||||||  |||||||||||       || ||| | |||||||||    
T  33756412 gggaaacacaaattatttccaggaataacatatccgggaatgaaaatatgaaaatttgattctcgggtatttgttaaaaaaagtatttggcaaataactt 33756511  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||| ||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  33756512 gacattcctaaaaaaattggaagttaca--tttttttttaaatatatgcataatatcatgggaat 33756574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 6400071 - 6400139
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||||    
T  6400071 aaacgtggacaaaaagtaatcttattttgtaagaaatacaaaagactaaaattttaattattctctaag 6400139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 22413808 - 22413896
Alignment:
Q  267 ggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||||||||  |||| ||||||||||||  ||| |||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||    
T  22413808 ggttttgaggttaaaagtcatccgaaccagaagataaataagtatgcggtttggtttggttcggttgacttttaaaataaaatctgaac 22413896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 19135235 - 19135128
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataag-tatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    ||||| ||||||||||||| | ||| |||||| |||||| ||| |||| ||  |||| |||||| ||||||||| ||||||||||||||||||| |||||    
T  19135235 ggtttggttcggttttgaggcaaaaagtcatctgaaccgaaaggtaaaaaaaatatgcggtttggtttggttcggttgacttttaaaataaaatatgaac 19135136  T
Q  356 caaaccaa 363  Q
    ||||||||    
T  19135135 caaaccaa 19135128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 9909029 - 9909139
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||| |||| ||||||||| || |||||||||||||| || | ||| ||||| | |||||||||||| ||| |||||||||| ||| | ||||||    
T  9909029 gtttggttcagtttagagactaaaagttatccgaaccgcaagatagaaaagcatgtgatatgttttggttcggttggcttttaaaatgaaagtcgaacca 9909128  T
Q  358 aaccaatgcgg 368  Q
    |||||||||||    
T  9909129 aaccaatgcgg 9909139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 8064457 - 8064571
Alignment:
Q  259 tttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagta--tgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||||||||||||| | |||||  |||||||||||||||| |||| ||  |  ||||||||| ||||||| |||||||||||||||||||| | |||||    
T  8064457 tttagttcggttttggg-ctaaaaatcatccgaaccgcaagataaaaaaaaacatgtggtttggtttggtttgattgacttttaaaataaaa-tcgaacc 8064554  T
Q  357 aaaccaatgcggtttgg 373  Q
    ||||| |||||||||||    
T  8064555 aaaccgatgcggtttgg 8064571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 13092242 - 13092313
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||| |||||||||||||||||||||||| || ||||| |||||||  ||||||||||||||||    
T  13092242 tttaaacgcggagaaaaagtaatcctattttgtaagatatgcaaaagactaaaaaatttatcattctctaag 13092313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 12108681 - 12108580
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagt-atgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacc 361  Q
    |||||||||| |||||||| |||||  ||| |||||| |||||||   ||| |||||||||||||||  ||||||||||||||| | |||||||||||||    
T  12108681 gttcggttttcagactaaaagtcatatgaatcgcaaggtaaataaaacatgcggtttgttttggttcagttgacttttaaaatatagtttgaaccaaacc 12108582  T
Q  362 aa 363  Q
    ||    
T  12108581 aa 12108580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 14940687 - 14940578
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||| ||  |||| || |||||||||||||| |||| ||  |||  ||||| ||||||||| ||||||||| |||||||||  ||||||||||||    
T  14940687 ttcggttttaaggttaaaggttatccgaaccgcaagataaaaaaacatgcagtttggtttggttcggttgactttttaaataaaatccgaaccaaaccaa 14940588  T
Q  364 tgcggtttgg 373  Q
     |||||||||    
T  14940587 cgcggtttgg 14940578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 29048084 - 29048204
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||| ||  |||| ||||||| ||||  ||| |||| | || || | |||| ||||||||| |||||||||||||||||||  ||    
T  29048084 tgcggtttggttcggttttaaggttaaaagtcatccaaaccataaggtaaaaaggtgtgcgatttggtttggttcggttgacttttaaaataaaatccga 29048183  T
Q  354 accaaaccaatgcggtttgga 374  Q
    || ||||||||||| ||||||    
T  29048184 actaaaccaatgcgatttgga 29048204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 31945271 - 31945203
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||| |||||  | |||||||||||||||||| |||||||||| ||| ||||||||||    
T  31945271 aaacgtggacaaaaattaatcaaactttgtaagaaatacaaaagactaaaatttgtataattctctaag 31945203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 725
Target Start/End: Original strand, 24765208 - 24765383
Alignment:
Q  557 tttggggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgttta-----gt 651  Q
    |||||||||||||||| |||||||| ||||||   ||  | ||||||||||||||||||||||||| ||| ||||||||       |||||||     |     
T  24765208 tttggggaaacacaaattattcccaggaataatatactcgggaatgaaaatatgaaaatttgattcctggatatttgttaaaaaaagtgtttaatttggc 24765307  T
Q  652 aaataacttgacattcctgaaaaaattggaagttacaactt--ttttaaaaaatctatgcataatatcatgggaat 725  Q
     ||||||||||||||| ||  ||||||| ||||||||  ||  ||||  |||||||||||| ||||||||||||||    
T  24765308 gaataacttgacattcatgggaaaattgaaagttacagttttcttttttaaaatctatgcaaaatatcatgggaat 24765383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 544
Target Start/End: Complemental strand, 7169916 - 7169853
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctct 544  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| ||||||||||    
T  7169916 aaacgtggacaaaaaataatcatattttgtaagaaatacaaaagactaaa--tttaatcattctct 7169853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 11417012 - 11417122
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagtt-aaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttg 352  Q
    |||||||| ||||| |||| || |||||  |||||||||||| ||| | ||| |||||||  ||||| ||||||| |||||||||||||||||||||       
T  11417012 tgcggtttggttcgatttttaggctaaaattcatccgaaccgtaagctgaaaaaagtatgctgtttgatttggtttgattgacttttaaaataaaatcca 11417111  T
Q  353 aaccaaaccaa 363  Q
    |||||||||||    
T  11417112 aaccaaaccaa 11417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 30752501 - 30752596
Alignment:
Q  267 ggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||||  ||| |||||| |||||||||| |||| ||| ||| |||||| ||||||||| ||||||||| ||||||||||  || ||||||||    
T  30752501 ggttttgagatgaaaagtcatctgaaccgcaagataaaaaagcatgcggtttggtttggttcggttgactttt-aaataaaattcaaaacaaaccaa 30752596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 779
Target Start/End: Original strand, 24765416 - 24765479
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaata 779  Q
    |||||||||||||| ||| |||| ||||||||||||||| || |||  ||||||||||||||||    
T  24765416 tcatgggaataatggaagttatgggaagttacttcattctcaggaatctttatacccaggaata 24765479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 26645506 - 26645431
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgatt 332  Q
    ||||||||| |||||||||  |||| ||||||||||||| ||| |||| || |||| |||||| ||||||||||||    
T  26645506 ggtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttggttcgatt 26645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 26751472 - 26751397
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgatt 332  Q
    ||||||||| |||||||||  |||| ||||||||||||| ||| |||| || |||| |||||| ||||||||||||    
T  26751472 ggtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttggttcgatt 26751397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 479 - 542
Target Start/End: Original strand, 29048795 - 29048858
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattct 542  Q
    ||||||| ||||||||||||| || |||||||||||||||||| |||||   ||||||||||||    
T  29048795 aaacgtgaacaaaaagtaatcttactttgtaagaaatacaaaagactaattattttatcattct 29048858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 542
Target Start/End: Complemental strand, 16971580 - 16971514
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattct 542  Q
    |||||||| |||||||||||||||||||||| ||| ||||| | || | |||| |||||||||||||    
T  16971580 tttaaacgcggacaaaaagtaatcctattttataaaaaatatagaagaataaattttttatcattct 16971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 22414052 - 22414094
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  22414052 aaacgtggacaaaaagtaatctcattttgtaagaaatacaaaa 22414094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 552
Target Start/End: Complemental strand, 24644778 - 24644716
Alignment:
Q  490 aaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaagggtgc 552  Q
    |||||||||| |||||||||| |||||||||  |||||| |||| ||||||||||||| ||||    
T  24644778 aaaagtaatcatattttgtaaaaaatacaaatgactaaatttttgatcattctctaagagtgc 24644716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 892466 - 892357
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||  |||| || ||||| ||||||||||||||||  |||| ||  ||| |||||| ||||||||| || ||||||||||||| ||  ||    
T  892466 tgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaacttttaaaataacatccga 892367  T
Q  354 accaaaccaa 363  Q
    || |||||||    
T  892366 actaaaccaa 892357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 7170174 - 7170113
Alignment:
Q  302 aaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||||| ||||||  |||| ||| ||||||||||||||||||||  |||||||||||    
T  7170174 aaataagtatgcggtttggattggatcggttgacttttaaaataaaattcaaaccaaaccaa 7170113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 10590808 - 10590897
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||| |||||||||||||  |||| ||||||| ||| || || |||| ||| ||| |||||| ||||||||| |||| ||||||||    
T  10590808 tgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 10590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 35040335 - 35040246
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||| |||||||||||||  |||| ||||||| |||||| || |||| ||| ||| |||||| ||||||| | |||| ||||||||    
T  35040335 tgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgatttttaaaa 35040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 28632959 - 28632999
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaacc 361  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  28632959 tttggttcggttgacttttaaaataatatttgaaccaaacc 28632999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 4562829 - 4562923
Alignment:
Q  269 ttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| ||||| | ||||| || || ||| ||||  ||||| | ||||| ||||||||  |||| |||||||||||||||| |||||||||||    
T  4562829 ttttgaggctaaaagacatcccaatcgtaagataaaagagtatttagtttggtttggttcagttgatttttaaaataaaatttaaaccaaaccaa 4562923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 8135393 - 8135438
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaag 299  Q
    |||| ||| ||||||||||||| ||||| |||||||||||||||||    
T  8135393 tgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaag 8135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 25006446 - 25006365
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaata 345  Q
    ||||||||||||  |||| ||||||  ||||| ||| |||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  25006446 ttcggttttgaggttaaatgtcatcttaaccgtaagataaaaaagtatgtgggttggtttggttcagttggcttttaaaata 25006365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 3e-44; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 18996589 - 18996753
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||| | ||||||   ||| ||||||||||||||||||||||||||| ||||||||||||       |||||| |||||||||||    
T  18996589 gggaaacacaaattattcctaggaataacatacccgagaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggtaaataactt 18996688  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  18996689 gacattcctggaaaaattggaagttacaattttttttaaaaatttatgcataatatcatgggaat 18996753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 18999128 - 18999292
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||| | ||||||   ||| ||||||||||||||||||||||||||| ||||||||||||       |||||| |||||||||||    
T  18999128 gggaaacacaaattattcctaggaataacatacccgagaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggtaaataactt 18999227  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  18999228 gacattcctggaaaaattggaagttacaattttttttaaaaatttatgcataatatcatgggaat 18999292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 643 - 816
Target Start/End: Original strand, 30260816 - 30260989
Alignment:
Q  643 gtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaataatgaaaggtatgagaa 742  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||   |||||||||||||||||||||||||||||| ||| |||| |||    
T  30260816 gtgtttggcaaataacttgacattcctggaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaataatggaagttatgggaa 30260915  T
Q  743 gttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    |||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  30260916 gttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 30260989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 8082536 - 8082371
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  8082536 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 8082437  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  8082436 gacattcctggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 8082371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 11685936 - 11685771
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||  | ||||||   ||| ||||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  11685936 gggaaacacaaattattcataggaataacatacccgagaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 11685837  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| ||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  11685836 gacattcctgtaaaaattggaagttacaattttttttttaaaatctatgcataatatcatgggaat 11685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 55467767 - 55467628
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||||||||||| ||||| ||||||||||| ||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||  ||    
T  55467767 tgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttgacttttaaaataaaatccga 55467668  T
Q  354 ac-----caaaccaatgcggtttggaatggatcagttggt 388  Q
    ||     ||||||||||||||||||| |||||||||||||    
T  55467667 accaaatcaaaccaatgcggtttggattggatcagttggt 55467628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 28247058 - 28246893
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||| ||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       ||||||   |||||||||    
T  28247058 gggaaatacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttgtcaaataactt 28246959  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||| || ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  28246958 gacattcgtggaaaaattggaagttacaatttttttttaaaaatctatgcataatatcatgggaat 28246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 596 - 725
Target Start/End: Original strand, 3777308 - 3777438
Alignment:
Q  596 gagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaa-ctttt 694  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||| | | ||||||||||||||||| ||||||||||||||||||  ||||    
T  3777308 gagaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcagataacttgacattcctggaaaaattggaagttacaatttttt 3777407  T
Q  695 ttaaaaaatctatgcataatatcatgggaat 725  Q
    ||  |||||||||||||||||||||||||||    
T  3777408 ttttaaaatctatgcataatatcatgggaat 3777438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 720
Target Start/End: Complemental strand, 37609288 - 37609127
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | || |||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  37609288 gggaaacacaaattattcccaggaataacatacccgggagtgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 37609189  T
Q  661 gacattcctgaaaaaattggaagttacaa--cttttttaaaaaatctatgcataatatcatg 720  Q
    |||||||||  ||||||||||||||||||   |||||| |||||||||||||||||||||||    
T  37609188 gacattcctagaaaaattggaagttacaattttttttttaaaaatctatgcataatatcatg 37609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 24373085 - 24373249
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   | | | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  24373085 gggaaacacaaattattcccaggaataacatatcgg-gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 24373183  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  24373184 gacattcctggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 24373249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 30801197 - 30801032
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||| || ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  30801197 gggaaacacaaattattctcaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 30801098  T
Q  661 gacattcctgaaaaaattggaagttaca-acttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||   ||||||   ||||||||||||||||||||||||||    
T  30801097 gacattcctggaaaaattggaagttacattttttttttttaaatctatgcataatatcatgggaat 30801032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 598 - 725
Target Start/End: Original strand, 45572710 - 45572838
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttta 697  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||     
T  45572710 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaatttttttt 45572809  T
Q  698 aa-aaatctatgcataatatcatgggaat 725  Q
       ||||||||||||||||||||||||||    
T  45572810 tttaaatctatgcataatatcatgggaat 45572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 561 - 696
Target Start/End: Complemental strand, 13696859 - 13696724
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| ||||||||||||||||||||||||||  || |||||||||       |||||| | |||||||||    
T  13696859 gggaaacacaaattattcccaggaataacatacccgagaatgaaaatatgaaaatttgattattgagtatttgttaaaaaaagtgtttggcaaataactt 13696760  T
Q  661 gacattcctgaaaaaattggaagttacaactttttt 696  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13696759 gacattcctgaaaaaattggaagttacaattttttt 13696724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 41957992 - 41958158
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||  || ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  41957992 gggaaacacaaattattttcaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 41958091  T
Q  661 gacattcctgaaaaaattggaagttacaa--cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||| |   ||||||   ||||||||||||||||||||||||||    
T  41958092 gacattcctgaaaaaattggaagttacgattttttttttttaaatctatgcataatatcatgggaat 41958158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 22257615 - 22257515
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||| |||||| ||| ||||  |||||||||||||||| ||  |||||||||||    
T  22257615 gttcggttttgagactaaaagtcatccgaaccgcgagataaataagtatgcggtttgatttagttcagttgacttttaaaataatatccgaaccaaacca 22257516  T
Q  363 a 363  Q
    |    
T  22257515 a 22257515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 598 - 694
Target Start/End: Original strand, 30260706 - 30260802
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttt 694  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||| | ||||||||||||||||||| |||||||||||||||||| ||||    
T  30260706 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaattttt 30260802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 26758190 - 26758290
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    |||||||||| ||  |||| ||||||||||||||||| |||||||||||  |||||| ||||||||| ||||||||||||||||| | ||| ||||||||    
T  26758190 gttcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatacggtttggtttggttcggttgacttttaaaataaagtctgatccaaacca 26758289  T
Q  363 a 363  Q
    |    
T  26758290 a 26758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 725
Target Start/End: Complemental strand, 53151694 - 53151562
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttaca-----actt 692  Q
    ||||||||||||||||||||||||| ||||||||||||        ||||| | ||||||||||||||||||| |||||||||||||||||       ||    
T  53151694 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaaatgtttggcaaataacttgacattcctggaaaaattggaagttacattttttttt 53151595  T
Q  693 ttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||   ||||||||||||||||||||||||||    
T  53151594 tttttttaaatctatgcataatatcatgggaat 53151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 363
Target Start/End: Original strand, 54121988 - 54122087
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||| |||||||  |||| ||||||||||||| ||| |||| ||||||| |||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  54121988 ttcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 54122087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 17144854 - 17144746
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||||||||||| ||||| ||||||| ||||||||| |||| ||||||| || ||| ||||||||| ||||||||||||||| |||  ||    
T  17144854 tgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaagataaa-aagtatgcggattggtttggttcggttgacttttaaaatagaatccga 17144756  T
Q  354 accaaaccaa 363  Q
    | ||||||||    
T  17144755 agcaaaccaa 17144746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 2566455 - 2566316
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||| ||| ||||| ||||||  ||||| |||||| ||||| |||| |||| || ||||||||||| || ||||||||| | ||||||||||||||||||    
T  2566455 tgcgctttggttcgattttgatgctaaaagtcatctgaaccacaagataaagaaatatgtggtttggttcggttcgattaagttttaaaataaaatttga 2566356  T
Q  354 accaaac-----caatgcggtttggaatggatcagttggt 388  Q
    |||||||     ||||| |||||||| |||||| ||||||    
T  2566355 accaaacaaaatcaatgtggtttggattggatcggttggt 2566316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 716 - 815
Target Start/End: Complemental strand, 11685738 - 11685639
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||||||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  11685738 tcatgggaataatggaagttatgagaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 11685639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 2566166 - 2566098
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||| ||| |||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||    
T  2566166 aaacatgggcaaaaagtaatcctattttgaaagaaatacaaaagactaaaatattaatcattctctaag 2566098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 547
Target Start/End: Complemental strand, 25919082 - 25919018
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||  | ||||||| |||||||||| |||||||||||||||||||||||||    
T  25919082 gtggacaaaaagtaatcaaactttgtaataaatacaaaagactaaaatttttatcattctctaag 25919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 55467478 - 55467406
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaa-aatttttatcattctctaag 547  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||   ||||||||||||||||||    
T  55467478 tttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactaattttttttatcattctctaag 55467406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 42363050 - 42362984
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  42363050 aaacgtggacaaaaagtaatcatattttgtaagaaatgcaaaatactaaga-ttttatcattctctaa 42362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 24373269 - 24373368
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  24373269 catgggaataatgaaagttatgggaggttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 24373368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 6004524 - 6004392
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| ||||||||||| |||||||||| ||  |||| ||||||| |||||| || |||| ||| ||| |||||| ||||||||| |||| ||||||    
T  6004524 gggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 6004425  T
Q  342 aataaaatttgaaccaaaccaatgcggtttgga 374  Q
    ||    ||   ||||||||||||||||||||||    
T  6004424 aaagtcatccaaaccaaaccaatgcggtttgga 6004392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 22256132 - 22256064
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||||||| ||| |||| ||||||||||||||||| ||||||| ||| |||||||||||||    
T  22256132 aaacgtgggcaaaaagaaattctatcttgtaagaaatacaaaagactaaaaatttaatcattctctaag 22256064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 254 - 386
Target Start/End: Complemental strand, 38652113 - 38651982
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||| ||||||||   |||| |||||||||| |||||| |||| || |||| |||||| ||||||||| |||||||| ||||||| ||   |    
T  38652113 tgcggtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaaaaa-tatgcggtttggtttggttcggttgactttaaaaataatatccaa 38652015  T
Q  354 accaaaccaatgcggtttggaatggatcagttg 386  Q
    ||||||| ||||||||||||  |||||| ||||    
T  38652014 accaaactaatgcggtttgggttggatcggttg 38651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 2832521 - 2832410
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatg-----tggtttgttttggttcgattgacttttaaaataaaattt 351  Q
    ||||| ||| ||||||||| ||||| |||||||||||| |||| |||| ||| |||     ||||||| ||||||||| |||||||||||||||||||      
T  2832521 ggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtttggttcggttgacttttaaaataaaatcc 2832422  T
Q  352 gaaccaaaccaa 363  Q
    ||| ||||||||    
T  2832421 gaatcaaaccaa 2832410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 26758474 - 26758545
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||| ||||||||||| ||||| |||| |||||||||| ||||||||| |||||||||| ||||    
T  26758474 tttaaacgcggataaaaagtaatcatatttggtaataaatacaaaagactaaaattgttatcattctgtaag 26758545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 41958191 - 41958291
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | |||||||||||||||||||  ||||||    
T  41958191 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatggatataat 41958290  T
Q  816 c 816  Q
    |    
T  41958291 c 41958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 50578831 - 50578765
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||| ||||||||| |||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  50578831 aaacatggacaaaacgtaatcctattttgtaagaaatgcaaaagactaaga-ttttatcattctctaa 50578765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 546
Target Start/End: Complemental strand, 5640555 - 5640494
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  5640555 tggacaaaatgtaatcctattttgtaagaaatgcaaaagactaaga-ttttatcattctctaa 5640494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 13696653 - 13696562
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatg 807  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | |||||||||||||||||||    
T  13696653 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatg 13696562  T

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Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 20846431 - 20846524
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagt--atgtggtttgttttggttcgattgacttttaaaataaaat 349  Q
    |||| ||||||||| |||| |||| ||||||||||||||||| |||| || |  ||| | |||| ||||||||| |||||||||||||||||||    
T  20846431 gtttggttcggtttcgagagtaaaagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaaataaaat 20846524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 22473201 - 22473123
Alignment:
Q  269 ttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaa 347  Q
    |||||||||||||  |||||| ||||||| | |||| || |||||| |||| |||||||||||||||||||| ||||||    
T  22473201 ttttgagactaaaaatcatccaaaccgcatgataaaaaattatgtgatttggtttggttcgattgacttttagaataaa 22473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 46253557 - 46253423
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||| ||| ||| |||||||||| |||| | |||| |||||||||  |||||||||||  | |||  ||||||||| ||| ||||||||||||| |   |    
T  46253557 tgcgctttggtttggttttgagaataaaagacatctgaaccgcaaaataaataagtattcgattttgtttggttcggttggcttttaaaataaattccaa 46253458  T
Q  354 accaaaccaatgcggtttggaatggatcagttggt 388  Q
    |||||||||||| |||||| | || ||||||||||    
T  46253457 accaaaccaatgtggtttgaattgaatcagttggt 46253423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 26292081 - 26291972
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||| |||| | | ||||  |||||| ||||||||| |||| || | || |||||| ||||||||| |||| |||||||||| ||| |||    
T  26292081 tgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgatttttaaaatagaatctga 26291982  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  26291981 accaaaccaa 26291972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 42363350 - 42363241
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| || ||  |||||||||| |||| ||  ||| |||||| ||||||||| |||||||| |||| |||||  ||    
T  42363350 tgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttcggttgactttaaaaacaaaatccga 42363251  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  42363250 accaaaccaa 42363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 485 - 542
Target Start/End: Original strand, 45629448 - 45629504
Alignment:
Q  485 ggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattct 542  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||    
T  45629448 ggacaaaaagcaatcct-ttttgtaagaaatacaaaagactaaaatatttatcattct 45629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 363
Target Start/End: Complemental strand, 8558082 - 8557974
Alignment:
Q  255 gcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaa 354  Q
    ||||||| ||| |||||||||  |||| |||| |||||| ||||| |||| |||  || |||||| || |||| |||||||||| ||||||||||  |||    
T  8558082 gcggtttggtttggttttgagggtaaaagtcacccgaactgcaagataaaaaagcttgcggtttggttcggtttgattgactttaaaaataaaatccgaa 8557983  T
Q  355 ccaaaccaa 363  Q
    |||||||||    
T  8557982 ccaaaccaa 8557974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 10481709 - 10481661
Alignment:
Q  315 gtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  10481709 gtttggtttggttcggttgacttttaaaataaaatttgaatcaaaccaa 10481661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 27054333 - 27054381
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaattt 532  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  27054333 tggacaaaaagtaatcatattttgtaagaaatacaaaagagtaaaattt 27054381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 44661881 - 44661989
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||||||||| ||||||||||| | || |||||||| ||| | |||| || ||||| ||||| |||| |||| ||||| || ||||||| || ||||||    
T  44661881 ggtttagttcgattttgagactataagttatccgaactgcatgataaaaaaatatgtagtttggtttgtttcgtttgacattcaaaataatatatgaacc 44661980  T
Q  357 aaaccaatg 365  Q
    |||| ||||    
T  44661981 aaacaaatg 44661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 54122571 - 54122639
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||| ||||||||||||||||| |    ||||||||||||||| |||||| ||||||||||||||||||    
T  54122571 aaacttggacaaaaagtaatccaacccagtaagaaatacaaaagactaaattttttatcattctctaag 54122639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 779
Target Start/End: Complemental strand, 8082338 - 8082275
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaata 779  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||    
T  8082338 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaata 8082275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 779
Target Start/End: Original strand, 18996786 - 18996849
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaata 779  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||    
T  18996786 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaata 18996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 779
Target Start/End: Original strand, 18999325 - 18999388
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaata 779  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||    
T  18999325 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaata 18999388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 25919348 - 25919273
Alignment:
Q  284 tcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaa 359  Q
    |||||||||| ||||| |||| ||||||| | |||| ||||||||  |||| |||||||||||||| |||||||||    
T  25919348 tcatccgaactgcaagataaaaaagtatgagttttgatttggttctgttgagttttaaaataaaatatgaaccaaa 25919273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 264 - 363
Target Start/End: Original strand, 38680774 - 38680872
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||||| |||||| ||||||| ||||| ||  |||| ||  ||| |||||| || ||||   |||||||||||||||||||||||||||||||||    
T  38680774 ttcggttttgaaactaaaagtcatccaaaccgtaatataaaaaac-atgaggtttggttcggttaagttgacttttaaaataaaatttgaaccaaaccaa 38680872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 45629160 - 45629243
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaa 347  Q
    ||||||||| ||  |||| ||||||||||||||||| ||||||||||||   |||| |||| || | |||||||||||||||||    
T  45629160 ttcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatgcaatttggtttgatttggttgacttttaaaataaa 45629243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 53151529 - 53151429
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| |||||||| |||||||       | |||||| |||||||||||| |||||||    
T  53151529 tcatgggaataatggaagttatgggaagttactccattctcaggaacctttatacctaggaatatttttttctcaacctgataacaaacatgggtataat 53151430  T
Q  816 c 816  Q
    |    
T  53151429 c 53151429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 44651217 - 44651278
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||||| |||||| |||||||||||    
T  44651217 tggacaaaacgtaatcttattttgtaagaaatgcaaaagactaagattttt-tcattctctaa 44651278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 388
Target Start/End: Complemental strand, 45915304 - 45915195
Alignment:
Q  278 taaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatg 377  Q
    |||| ||||| | ||||||||| | |||||||||| |||||| ||||||||| |||||||||||||  |||    ||||| |||||||||||||| | ||    
T  45915304 taaaggtcattcaaaccgcaagatgaataagtatgcggtttggtttggttcggttgacttttaaaaccaaa-ccaaaccagaccaatgcggtttgaattg 45915206  T
Q  378 gatcagttggt 388  Q
    |||| ||||||    
T  45915205 gatcggttggt 45915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 27054036 - 27054141
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    ||||| ||||||||||||  |||| || || ||||  ||||| ||||||||||||   |||| ||||||| | |||| |||||||||||||||  |||||    
T  27054036 gtttatttcggttttgaggttaaaagttattcgaattgcaagataaataagtatgcattttggtttggtttggttgaattttaaaataaaattcaaacca 27054135  T
Q  358 aaccaa 363  Q
    ||||||    
T  27054136 aaccaa 27054141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 38651815 - 38651766
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||| |||||    
T  38651815 tggacaaaatgtaatcctattttctaagaaatacaaaagactaagatttt 38651766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 45699636 - 45699680
Alignment:
Q  316 tttgttttggttcgattgacttttaaaataaaatttgaaccaaac 360  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||    
T  45699636 tttggttttgttcgattgacttttaaaataaaatttgaatcaaac 45699680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 527
Target Start/End: Complemental strand, 51660950 - 51660902
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaa 527  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  51660950 aaacgtgaacaaaaagtaatcatattctgtaagaaatacaaaatactaa 51660902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 687
Target Start/End: Original strand, 20307370 - 20307461
Alignment:
Q  596 gagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttac 687  Q
    |||||||||| ||| |||||||||||  ||||||||||||       |||||| | ||||||||| |||||| || ||||| ||||||||||    
T  20307370 gagaatgaaattataaaaatttgattattgggtatttgttaaaataagtgtttggcaaataacttaacattcttggaaaaactggaagttac 20307461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 25465824 - 25465866
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| |||||||||||||||||||||  ||||||||||||    
T  25465824 tttggtttgattgacttttaaaataaaatccgaaccaaaccaa 25465866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 37045561 - 37045603
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||    
T  37045561 aaacgcggacaaaaagtaatcttattttgtaagaaatgcaaaa 37045603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 243 - 363
Target Start/End: Original strand, 20038330 - 20038451
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| |||||| |||| |||| ||||| ||  |||| |||||| |||||| ||| |||  ||| |||||||||| ||||||||||||  | |||||    
T  20038330 gggtgtttacgatgcagtttggttcagttttaaggttaaaagtcatctgaaccgtaagataaggaagcatgtggtttggtttggttcgattagcatttaa 20038429  T
Q  342 aataaaatttgaaccaaaccaa 363  Q
     || ||| | ||||||||||||    
T  20038430 catgaaaatcgaaccaaaccaa 20038451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 4e-40; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 31293039 - 31293204
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  31293039 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 31293138  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  31293139 gacattcccgaaaaaattggaagttacaatttttttttaaaaatctatgcataatatcatgggaat 31293204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 30586077 - 30586241
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||| ||| ||||||   ||| | ||||||||||||||||||||||||| || |||||||||       |||||| | |||||||||    
T  30586077 gggaaacacaaattatttccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgagtatttgttaaaaaaagtgtttggcaaataactt 30586176  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  30586177 gacattcctgaaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 30586241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 41743138 - 41743302
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||| ||| ||||||   ||| |  |||||||||||||||||||||||| ||| ||||||||       |||||| | |||||||||    
T  41743138 gggaaacacaaattatttccaggaataacatacccggaaatgaaaatatgaaaatttgattcttggatatttgttaaaaaaagtgtttggcaaataactt 41743237  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  41743238 gacattcctgaaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 41743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 20372634 - 20372466
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| ||||||||||||||||||||||||||| || |||||||||       |||||| | |||||||||    
T  20372634 gggaaacacaaattattcccaggaataacatacccgagaatgaaaatatgaaaatttgattcttgtgtatttgttaaaaaaagtgtttggcaaataactt 20372535  T
Q  661 gacattcctgaaaaaattggaagttacaa----cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| ||||||||||||||||||     ||||||   ||||||||||||||||||||||||||    
T  20372534 gacattcctggaaaaattggaagttacaattttttttttttttaaatctatgcataatatcatgggaat 20372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 49142138 - 49141970
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    ||||||||| || |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  49142138 gggaaacactaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 49142039  T
Q  661 gacattcctgaaaaaattggaagttaca---acttttttaaaaaatctatgcataatatcatgggaata 726  Q
    ||||||||||||||||||||||||||||     ||||||   |||||||||||||||||||||||||||    
T  49142038 gacattcctgaaaaaattggaagttacattttttttttttttaaatctatgcataatatcatgggaata 49141970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 47266263 - 47266430
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||| || ||||||   | | | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  47266263 gggaaacacaaattattctcaggaataacatatccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggaaaataactt 47266362  T
Q  661 gacattcctg--aaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||  |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  47266363 gacattcctggaaaaaaattggaagttacaattttttttttaaaatctatgcataatatcatgggaat 47266430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 23032631 - 23032740
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||| || ||||| ||||| |||||| |||||| ||| |||| |||||||||||||  ||||||||| |||||||||||||||||||||||    
T  23032631 tgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagtatgtggtttagtttggttcggttgacttttaaaataaaatttga 23032730  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  23032731 accaaaccaa 23032740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 8568679 - 8568584
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaat 349  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||| |||||||||||| |||||| || |||||| |||||||||||||||||||    
T  8568679 tgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttcggttgacttttaaaataaaat 8568584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 20334563 - 20334668
Alignment:
Q  276 actaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaa 375  Q
    |||||| ||| ||||||||||||| ||||||| |||| |||||| ||||||||| |||||||| |||||||||| |||||||||||| ||| |||||||     
T  20334563 actaaaagtcgtccgaaccgcaagataaataaatatgcggtttggtttggttcggttgactttaaaaataaaatctgaaccaaaccattgctgtttggat 20334662  T
Q  376 tggatc 381  Q
    ||||||    
T  20334663 tggatc 20334668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 596 - 725
Target Start/End: Original strand, 44079889 - 44080018
Alignment:
Q  596 gagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttt 695  Q
    ||||||||||||||||||||||||||| | ||||||||||       ||||||   ||||||||||| ||| ||| |||||||||||||||||| |||||    
T  44079889 gagaatgaaaatatgaaaatttgattcttaggtatttgttaaaaaaagtgtttgacaaataacttgatattactggaaaaattggaagttacaatttttt 44079988  T
Q  696 taaaaaatctatgcataatatcatgggaat 725  Q
    |   |||||||||| |||||||||||||||    
T  44079989 ttttaaatctatgcgtaatatcatgggaat 44080018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 373
Target Start/End: Complemental strand, 7686035 - 7685924
Alignment:
Q  265 tcggttttgagactaaacgtcatccgaaccgcaagttaaataag---tatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacc 361  Q
    ||||||||||||||||| ||||| | ||||||||  |||| ||    ||||||||||| ||||||||  |||| ||||||||||||||||||||||||||    
T  7686035 tcggttttgagactaaaagtcattcaaaccgcaaaataaaaaaaaaatatgtggtttgatttggttcatttgatttttaaaataaaatttgaaccaaacc 7685936  T
Q  362 aatgcggtttgg 373  Q
    ||||||||||||    
T  7685935 aatgcggtttgg 7685924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 254 - 388
Target Start/End: Original strand, 29628065 - 29628199
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||   ||| |  |||||||||||||| |||| ||  ||| |||||| |||||||||  ||| ||||||||||||||||||    
T  29628065 tgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttcggctgaattttaaaataaaatttga 29628164  T
Q  354 accaaaccaatgcggtttggaatggatcagttggt 388  Q
    | |||||||||| |||||||  |||||| ||||||    
T  29628165 atcaaaccaatgtggtttgggttggatcggttggt 29628199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 256 - 365
Target Start/End: Complemental strand, 8118403 - 8118294
Alignment:
Q  256 cggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||||| |||| ||||||||  ||||  | |||||||||||||| |||| ||| |||||||||| ||||||||| |||| ||| |||||||||| |||||    
T  8118403 cggtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattttaaaaataaaatctgaac 8118304  T
Q  356 caaaccaatg 365  Q
    ||||||||||    
T  8118303 caaaccaatg 8118294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 10338931 - 10338827
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| ||| |||||||||  |||| ||||||| ||| ||||  ||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||    
T  10338931 gtttggtttggttttgagggtaaa-gtcatccaaactgcaaaataaataagtatttggttttatttggttcgattgacttttaaaataaaatctgaacca 10338833  T
Q  358 aaccaa 363  Q
    ||||||    
T  10338832 aaccaa 10338827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 31577444 - 31577533
Alignment:
Q  599 aatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttaca 688  Q
    ||||||||||| |||||||||||| ||||||||||||       |||||||| ||||||||||||||||||| ||| |||||||||||||    
T  31577444 aatgaaaatataaaaatttgattcttgggtatttgttaaaaaaagtgtttagcaaataacttgacattcctggaaatattggaagttaca 31577533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 8568389 - 8568322
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  8568389 aaacgtgggcaaaaagtaatcttattttgtaagaaatacaaaagactgaaattttaatcattctctaa 8568322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 484 - 547
Target Start/End: Complemental strand, 11834293 - 11834230
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  11834293 tggacaaaaagtaatcatattttgtaagaaatacaaaagactaaaattttaatcattctttaag 11834230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 16535864 - 16535758
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||||||||| ||||||| ||||| ||||| | |||||||||||||| ||  ||| |||||  || |||||| |||||||||||||||||||  ||||||    
T  16535864 gtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaaataaaatccgaacca 16535765  T
Q  358 aaccaat 364  Q
    |||||||    
T  16535764 aaccaat 16535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 364
Target Start/End: Original strand, 16629798 - 16629904
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||||||||| ||||||| ||||| ||||| | |||||||||||||| ||  ||| |||||  || |||||| |||||||||||||||||||  ||||||    
T  16629798 gtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaaataaaatccgaacca 16629897  T
Q  358 aaccaat 364  Q
    |||||||    
T  16629898 aaccaat 16629904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 30586261 - 30586360
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||||||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  30586261 catgggaataatggaagttatgagaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 30586360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 600 - 725
Target Start/End: Complemental strand, 22916831 - 22916705
Alignment:
Q  600 atgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaaa 699  Q
    |||||||||||||| |||||||| || |||||||||        ||||||| |||||||||||||||| || |||||||| ||||||||| ||||||       
T  22916831 atgaaaatatgaaattttgattcctgagtatttgttaaaaaaaatgtttagcaaataacttgacattcttggaaaaattgaaagttacaatttttttttt 22916732  T
Q  700 -aaatctatgcataatatcatgggaat 725  Q
     ||||||||||| ||||||||||||||    
T  22916731 taaatctatgcagaatatcatgggaat 22916705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 10338641 - 10338573
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||  | ||||||||||    
T  10338641 aaacgtggacaaaaagtaatcatattttgtaagagatacaaaagactaaaattttagttattctctaag 10338573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 35820203 - 35820103
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  ||||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  35820203 gttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaacca 35820104  T
Q  363 a 363  Q
    |    
T  35820103 a 35820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 31287889 - 31287795
Alignment:
Q  269 ttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| ||||  |||||| |||||| ||| |||||||||||| |||||| ||||||||| |||||||||||||||| ||  ||||||| ||||    
T  31287889 ttttgaggctaatagtcatctgaaccgtaagataaataagtatgcggtttggtttggttcggttgacttttaaaataagatccgaaccaatccaa 31287795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 533
Target Start/End: Original strand, 23729618 - 23729675
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  23729618 tttaaacgtgaacaaaaagtaatcatattttgtaagaaatacaaaagactaagatttt 23729675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 32942200 - 32942095
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||||||  |||| ||||||||||| ||||| |||| ||  ||| |||||| |||| |||| ||||||||||||||| |||  ||||||    
T  32942200 gtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaacatgcggtttggtttgattcggttgacttttaaaatacaatccgaacca 32942101  T
Q  358 aaccaa 363  Q
    ||||||    
T  32942100 aaccaa 32942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 524968 - 524872
Alignment:
Q  277 ctaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttgg 373  Q
    ||||| || ||| |||||||||| |||| || |||| |||||| |||| ||||||||||||||||||||||||   |||||||||||| || |||||    
T  524968 ctaaaagttatctgaaccgcaagataaaaaaatatgcggtttggtttgattcgattgacttttaaaataaaatccaaaccaaaccaattcgatttgg 524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 20334832 - 20334880
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaa 527  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  20334832 aaacgtgcacaaaaagtaatcctattttgtaagaaatacaaaagactaa 20334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 48642746 - 48642846
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    |||||||||||||  ||||  ||||| |||||||||| | || ||  ||| |||||| ||||||||| |||||||| ||||| |||||||||||||||||    
T  48642746 gttcggttttgagggtaaaattcatctgaaccgcaagattaaaaaacatgcggtttggtttggttcggttgactttaaaaattaaatttgaaccaaacca 48642845  T
Q  363 a 363  Q
    |    
T  48642846 a 48642846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 11834624 - 11834533
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaata 345  Q
    |||||||| |||||||| || | ||||| || ||||||||  |||| |||||||||||| |||||| |||||||| ||||| ||||||||||    
T  11834624 tgcggtttggttcggttgtgtgcctaaaagttatccgaactacaagataaataagtatgcggtttggtttggttcaattgatttttaaaata 11834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 20372433 - 20372333
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| |||||||||  |||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  20372433 tcatgggaataatggaagttatgggaagttactcaattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 20372334  T
Q  816 c 816  Q
    |    
T  20372333 c 20372333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 284 - 363
Target Start/End: Original strand, 23729375 - 23729454
Alignment:
Q  284 tcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||||||||||||||| |||| ||| ||| |||||| |||   ||| ||||||||||||||||||| |||||||||||||    
T  23729375 tcatccgaaccgcaagataaaaaagcatgcggtttggtttaactcggttgacttttaaaataaaatctgaaccaaaccaa 23729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 47266463 - 47266563
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| || |||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  47266463 tcatgggaataatggaagttatgggaggttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 47266562  T
Q  816 c 816  Q
    |    
T  47266563 c 47266563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 546
Target Start/End: Original strand, 48643037 - 48643103
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  48643037 aaacatggacaaaacgtaatcatattttgtaagaaatacaaaagactaaga-ttttatcattctctaa 48643103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 21237842 - 21237784
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggttt 371  Q
    ||||||| |||| || ||||||||||||||||||||| |||| ||||||||||||||||    
T  21237842 tggtttggtttgatttgattgacttttaaaataaaatctgaatcaaaccaatgcggttt 21237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 816
Target Start/End: Complemental strand, 49141951 - 49141852
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    |||| |||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  49141951 catgagaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 49141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 22298781 - 22298834
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaattt 532  Q
    ||||||| |||||||||||||||||||  |||||||||||||| ||||||||||    
T  22298781 aaacgtgaacaaaaagtaatcctatttgataagaaatacaaaagactaaaattt 22298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 816
Target Start/End: Original strand, 44080053 - 44080151
Alignment:
Q  718 atgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    |||||||||||||||| |||| ||||||||| ||||| || |||| |||||| |||||||||       | |||||||||||||||||||  |||||||    
T  44080053 atgggaataatgaaagttatgggaagttactccattcccaggaacctttatatccaggaatatatttttctcaacctcataacaaacatggatataatc 44080151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 31287603 - 31287543
Alignment:
Q  487 acaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||| ||||||||||||||||| |||||||||||| |||| | ||||||||| ||||||||    
T  31287603 acaacaagtaatcctattttgtcagaaatacaaaagactacattttttatcaatctctaag 31287543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 813
Target Start/End: Original strand, 31293224 - 31293320
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtata 813  Q
    ||||||||||||| ||| |||| ||||||||| ||||| ||||||| |||||||| | |||||       | ||||||| |||||||||||||||||    
T  31293224 catgggaataatggaagttatgggaagttactccattctcatgaacctttataccgaagaatatttttttctcaacctcgtaacaaacatgagtata 31293320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 264 - 363
Target Start/End: Original strand, 46147183 - 46147282
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||| |||  ||| ||||||  ||||| ||| |||| ||| ||| || ||| ||||||| | ||||||||||||||||||| |||||||||||||    
T  46147183 ttcggttttaagatgaaaagtcatctaaaccgtaaggtaaaaaagcatgcggattggtttggtttggttgacttttaaaataaaatctgaaccaaaccaa 46147282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 2308181 - 2308131
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  2308181 tggtttggtttggttcggttgatttttaaaataaaatttgaaccacaccaa 2308131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 25007347 - 25007409
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaa 375  Q
    ||||||| |||| ||||||| ||||||||| ||||||   |||||||||||||||||||||||    
T  25007347 tggtttggtttgattcgattaacttttaaactaaaatccaaaccaaaccaatgcggtttggaa 25007409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 49012299 - 49012341
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  49012299 aaacgtggacaaaaagtaattctattttgtaagaaatgcaaaa 49012341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 40848808 - 40848913
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| ||||| ||||  | ||| |||| ||  ||  |||||| ||||||||| |||||||||||||||||||  ||    
T  40848808 tgcggtttggttcggttttgagggtaaaagtcattcgaattgtaaggtaaaaaaacatacggtttggtttggttcggttgacttttaaaataaaatccga 40848907  T
Q  354 accaaa 359  Q
    ||||||    
T  40848908 accaaa 40848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 7697537 - 7697605
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||| |||||||||||| | ||||||||||||  |||| | |||| |||||||||||| |||||    
T  7697537 aaacgtggaaaaaaagtaatccaactttgtaagaaattaaaaagattaaattttttatcattccctaag 7697605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 26215262 - 26215154
Alignment:
Q  242 tgggtgtttc-gatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgactttta 340  Q
    |||||||||| | |||||||| ||| |||||||||  |||| ||||||| ||||||||| |||  ||| ||  || ||  ||||||||| ||||||||||    
T  26215262 tgggtgtttctggtgcggtttggtttggttttgaggttaaaagtcatccaaaccgcaagataataaagcatacgggtttgtttggttcggttgactttta 26215163  T
Q  341 aaataaaat 349  Q
    |||||||||    
T  26215162 aaataaaat 26215154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 34750942 - 34751054
Alignment:
Q  251 cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    ||||||||||| |||| ||||| || ||||| ||||| |||| |||||  || | ||||||| || ||| ||||||| | |||| ||||||||||||||     
T  34750942 cgatgcggtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagtatgcgggttggtttggtttggttgatttttaaaataaaatc 34751041  T
Q  351 tgaaccaaaccaa 363  Q
     ||| ||||||||    
T  34751042 cgaatcaaaccaa 34751054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 35819908 - 35819836
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaa-atttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| ||||||  ||||||||||||| ||||    
T  35819908 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaatttttttatcattctttaag 35819836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 546
Target Start/End: Original strand, 23675627 - 23675693
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||||||||||||||||||||||| ||||| ||||  |||| | ||| | ||||||||||||||||    
T  23675627 aaacgtggacaaaaagtaatcctattatgtaataaatgtaaaagattaaga-ttttatcattctctaa 23675693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 4153852 - 4153746
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||||||  ||| |||||||| ||||| ||||| |||||  |  | |||| ||| ||| ||| || ||||||||| |||||||| || |||||||||||    
T  4153852 tgcggtttgattcagttttgaggctaaaagtcattcgaacaacgggataaaaaagcatgcggtatggtttggttcggttgactttaaatataaaatttga 4153753  T
Q  354 accaaac 360  Q
    |||||||    
T  4153752 accaaac 4153746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 13852269 - 13852355
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    ||||| |||||||||||||  |||| ||||||| ||| || || |||| ||| ||| |||||| ||||||||| |||| ||||||||    
T  13852269 ggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 13852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 561 - 635
Target Start/End: Original strand, 32031377 - 32031451
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgtt 635  Q
    |||||||||||| |||||  | ||||||   | ||| ||||||||||||||||||||||||| ||| ||||||||    
T  32031377 gggaaacacaaattattcttaggaataacatatctgggaatgaaaatatgaaaatttgattcttggatatttgtt 32031451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 46147460 - 46147514
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||||||||||||||||||| ||||| ||||||||||  |||| ||||| |||||    
T  46147460 aaacgtggacaaaaagtaattctattatgtaagaaatgtaaaagactaagatttt 46147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 47646778 - 47646736
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||| |||| |||||||||||| |||||||||||||||    
T  47646778 tttggttcggttgatttttaaaataaagtttgaaccaaaccaa 47646736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 27111310 - 27111234
Alignment:
Q  284 tcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||| |||||||||| ||||  ||||||||||||| ||| ||||| ||   ||||||||||||||| ||| ||||||||    
T  27111310 tcatctgaaccgcaagataaaatagtatgtggtttgattttgttcggtt---ttttaaaataaaattcgaatcaaaccaa 27111234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 4e-40; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 30518465 - 30518632
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||||||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  30518465 gggaaacacaaattattcccatgaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 30518564  T
Q  661 gacattcctgaaaaaattggaagttacaa---cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| ||||||||||||||||||    ||||||||||||| |||||||||||||||||||||    
T  30518565 gacattcctggaaaaattggaagttacaattttttttttaaaaaatatatgcataatatcatgggaat 30518632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 15805945 - 15805781
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | |||||||||||| |||||||||||| ||||||||||||       ||||||   |||||||||    
T  15805945 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatattaaaatttgattcttgggtatttgttaaaaaaagtgtttgacaaataactt 15805846  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||| ||| |||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  15805845 gacatttctggaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 15805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 598 - 725
Target Start/End: Original strand, 32597406 - 32597536
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttta 697  Q
    ||||||||||||||||||||||||| ||||||||||||        ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  32597406 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaaatgtttagcaaataacttgacattcctggaaaaattggaagttacaattttttta 32597505  T
Q  698 ---aaaaatctatgcataatatcatgggaat 725  Q
        |||||||||||||||||||||||||||    
T  32597506 ttttaaaatctatgcataatatcatgggaat 32597536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 41461043 - 41461148
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||| |||||||| |||| |||||||||||| |||| ||||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  41461043 gtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttcggttgacttttaaaataaaattcgaacca 41461142  T
Q  358 aaccaa 363  Q
    ||||||    
T  41461143 aaccaa 41461148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 5614729 - 5614564
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    ||||||||||||||||||||| ||||||   ||  | |||||||||||| |||||||||||| ||| ||||||||       |||||| | |||||||||    
T  5614729 gggaaacacaaactattcccaggaataatatactcgggaatgaaaatataaaaatttgattcttggatatttgttaaaaaaagtgtttggcaaataactt 5614630  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    ||||||| || |||||||| ||||||||| ||||||    ||||||||||||||||||||||||||    
T  5614629 gacattcttggaaaaattgaaagttacaatttttttttttaaatctatgcataatatcatgggaat 5614564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 12041711 - 12041598
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||| ||||||||||||| ||||| |||||| |||||| ||| |||| ||  ||| |||||| ||||||||| |||||||||||||||||||  |||||    
T  12041711 ggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttcggttgacttttaaaataaaatccgaacc 12041612  T
Q  357 aaaccaatgcggtt 370  Q
    ||||||||||||||    
T  12041611 aaaccaatgcggtt 12041598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 27301605 - 27301500
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||||||| |||| | |||||| |||||||| |||| ||| ||| |||||| |||| |||| |||||||||||||||||||||||||||    
T  27301605 gtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaagcatgcggtttggtttgattcggttgacttttaaaataaaatttgaacca 27301506  T
Q  358 aaccaa 363  Q
    ||||||    
T  27301505 aaccaa 27301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 243 - 388
Target Start/End: Original strand, 1330955 - 1331101
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| |||||||||||  ||||||||| |||| |||  ||||||||||| |||| |||| ||| |||  | ||| ||||||||| |||||||||||    
T  1330955 gggtgtttgcgatgcggtttgattcggttttaagacgaaaaatcatccgaaccacaaggtaaaaaagcatgcagattggtttggttcggttgacttttaa 1331054  T
Q  342 aataaaatttgaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    ||||||||   ||||||||||||| |||||||  |||||||||||||    
T  1331055 aataaaatccaaaccaaaccaatgtggtttgggttggatcagttggt 1331101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 27641038 - 27641206
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||| ||| |||||||| ||||||   ||  | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  27641038 gggaaacaaaaattattcccaggaataacatactcgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 27641137  T
Q  661 gacattcctgaaaaaattggaagttacaact----tttttaaaaaatctatgcataatatcatgggaat 725  Q
    | |||||||| |||||||| ||||||||| |    |||||   ||||||||||||||||||||||||||    
T  27641138 ggcattcctggaaaaattgaaagttacaatttttattttttttaaatctatgcataatatcatgggaat 27641206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 253 - 388
Target Start/End: Original strand, 44085445 - 44085581
Alignment:
Q  253 atgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataa-gtatgtggtttgttttggttcgattgacttttaaaataaaattt 351  Q
    ||||||||| |||| ||||||||  | || |||||| |||||||||| |||| || | ||| |||||| ||||||||| |||||||| |||||||||| |    
T  44085445 atgcggtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactttaaaaataaaatct 44085544  T
Q  352 gaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    ||| ||||||||||||||||||  |||||| ||||||    
T  44085545 gaatcaaaccaatgcggtttgggttggatcggttggt 44085581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 11678243 - 11678314
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  11678243 tttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactaaattttctatcattctctaag 11678314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 11695721 - 11695792
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  11695721 tttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactaaattttctatcattctctaag 11695792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 15805748 - 15805648
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  15805748 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 15805649  T
Q  816 c 816  Q
    |    
T  15805648 c 15805648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 32597569 - 32597669
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  32597569 tcatgggaataatggaagttatgggaagttactccattctcaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 32597668  T
Q  816 c 816  Q
    |    
T  32597669 c 32597669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 257 - 359
Target Start/End: Original strand, 17762702 - 17762804
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||| ||| ||||||||| ||||| |||| ||||||||| || |||| ||  ||| |||||| ||||||||| |||||||||||||||||||  |||||    
T  17762702 ggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttcggttgacttttaaaataaaatccgaacc 17762801  T
Q  357 aaa 359  Q
    |||    
T  17762802 aaa 17762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 44979894 - 44979774
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| ||||||| |||||| || |||| ||| ||| |||||| ||||||||| |||| ||||||||    ||   |    
T  44979894 tgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaaagtcatccaa 44979795  T
Q  354 accaaaccaatgcggtttgga 374  Q
    |||||||||||||||||||||    
T  44979794 accaaaccaatgcggtttgga 44979774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 5614531 - 5614431
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| |||||||||| |||||       | ||||||||||||||||||| |||||||    
T  5614531 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaagaatatttttttctcaacctcataacaaacatgggtataat 5614432  T
Q  816 c 816  Q
    |    
T  5614431 c 5614431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 11377489 - 11377427
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| | ||||||||||||||||    
T  11377489 gtggacaaaaaataatcctattctgtaagaaatacaaaagactaaga-ttttatcattctctaa 11377427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 5862709 - 5862647
Alignment:
Q  301 taaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||| ||||||| |||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  5862709 taaaaaagtatgcggtttggtttggttcggttgacttttaaaataaaatccgaaccaaaccaa 5862647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 28790463 - 28790572
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||| |||||||   |||| |||||| |||||||||| |||| ||| ||| |||||| || | |||| |||||||||||||||||||   |    
T  28790463 tgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgacttttaaaataaaatccaa 28790562  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  28790563 accaaaccaa 28790572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 44085744 - 44085803
Alignment:
Q  486 gacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||    
T  44085744 gacaaaacgtaatcctattttgtaagaaatacaaaagactgaga-ttttatcattctctaa 44085803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 716 - 815
Target Start/End: Original strand, 30518665 - 30518763
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| |||||||||  |||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  30518665 tcatgggaataatggaagttatgggaagttactcaattcccaggaacctttatacccaggaata-ttttttctcaacctcataacaaacatgggtataat 30518763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 11051230 - 11051175
Alignment:
Q  490 aaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||||||| |||||||||||||| ||||| | | ||||||||||||||||    
T  11051230 aaaagtaatcctattatgtaagaaatacaacaaactgata-ttttatcattctctaa 11051175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 489 - 533
Target Start/End: Complemental strand, 15320414 - 15320370
Alignment:
Q  489 aaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||    
T  15320414 aaaaagtaatcatattttgtaagaaatacaaaagactaagatttt 15320370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 30759712 - 30759664
Alignment:
Q  315 gtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||| |||| |||| ||| |||||||||||||||||||||||||||||    
T  30759712 gtttggtttgattcggttggcttttaaaataaaatttgaaccaaaccaa 30759664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 30761876 - 30761772
Alignment:
Q  259 tttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaa 358  Q
    ||||||||| |||||||  |||| |||||| ||| | |||| |||| ||  ||| ||||||||||| ||   ||||||||||||||||||||  ||||||    
T  30761876 tttagttcgattttgaggttaaaagtcatctgaatcacaagataaaaaaacatgcggtttgttttgattatgttgacttttaaaataaaattcaaaccaa 30761777  T
Q  359 accaa 363  Q
    |||||    
T  30761776 accaa 30761772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 11678013 - 11678060
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaac 360  Q
    ||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  11678013 tggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac 11678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 11695491 - 11695538
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaac 360  Q
    ||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  11695491 tggtttgatttggttcggttgacttttaaaataaaatccgaaccaaac 11695538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 365
Target Start/End: Original strand, 12884488 - 12884594
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||| |||| ||  |||| ||||||| ||| ||| | |||| ||||||| |||||| |||||||     ||||||||||||||||||  |    
T  12884488 tgcggtttggttcgattttaaggttaaaagtcatccaaactgcatggtaaaaaagtatgcggtttggtttggtt-----gacttttaaaataaaattcaa 12884582  T
Q  354 accaaaccaatg 365  Q
    ||||||||||||    
T  12884583 accaaaccaatg 12884594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 1331243 - 1331297
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||||||||||||||||||| ||||| ||||||||||  |||| ||||| |||||    
T  1331243 aaacgtggacaaaaagtaattctattatgtaagaaatgtaaaagactaagatttt 1331297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 521
Target Start/End: Complemental strand, 5862502 - 5862460
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    |||| |||| |||||||||||| ||||||||||||||||||||    
T  5862502 aaacatggataaaaagtaatccaattttgtaagaaatacaaaa 5862460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 21480870 - 21480828
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||    
T  21480870 tttggttcggttgacttttaaaataaaatctgaactaaaccaa 21480828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 343
Target Start/End: Original strand, 44035264 - 44035353
Alignment:
Q  255 gcggtttagttcggttttgagactaaacgtcatccgaaccgc-aagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    ||||||| |||||||||||||  |||| ||||||| |||||| || | ||| ||| ||| |||||| ||||||||| |||| ||||||||    
T  44035264 gcggtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 44035353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 56080615 - 56080779
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| ||||||||||||||||||||||||||| ||||||||||||       ||||||   |||||||||    
T  56080615 gggaaacacaaattattcccaggaataacatacccgagaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttgacaaataactt 56080714  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  56080715 gacattcctggaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 56080779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 26695841 - 26696007
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  26695841 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 26695940  T
Q  661 gacattcctgaaaaaattggaagttacaactttttt--aaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  26695941 gacattcctagaaaaattggaagttacaatttttttaaaaaaaatctatgcataatatcatgggaat 26696007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 40591251 - 40591087
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| ||||||||||||||||||||||||||| ||||||||| ||       |||||| | |||||| ||    
T  40591251 gggaaacacaaattattcccaggaataacatacccgagaatgaaaatatgaaaatttgattcttgggtatttattaaaaaaagtgtttggcaaataattt 40591152  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40591151 gacattcctggaaaaattggaagttacaattttttttttaaatctatgcataatatcatgggaat 40591087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 816
Target Start/End: Complemental strand, 2623437 - 2623181
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||| | ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  2623437 gggaaacacaaattattcctaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 2623338  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaataatgaaaggtatgagaagttacttcattcacatg 759  Q
    |||||||||||||||||||||||||||||  ||||||   ||||||  | ||||  | |||||||||||| ||| |||| |||||||||  |||| || |    
T  2623337 gacattcctgaaaaaattggaagttacaatttttttttttaaatctgagaataaatttatgggaataatggaagttatgggaagttactctattcccaag 2623238  T
Q  760 aacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    |||  ||||||| |||||||       | ||||||||||||||||||| ||||||||    
T  2623237 aacccttatacctaggaatatttttttctcaacctcataacaaacatgggtataatc 2623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 24072405 - 24072571
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    ||||||||||||||||| ||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  24072405 gggaaacacaaactatttccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 24072504  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa--aaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||     ||||||||||||||||||||||||||    
T  24072505 gacattcctggaaaaattggaagttacaattttttttttttaaatctatgcataatatcatgggaat 24072571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 39502606 - 39502772
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||  || ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  39502606 gggaaacacaaattattttcaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 39502705  T
Q  661 gacattcctgaaaaaattggaagttacaa--cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||||||||||||||||||||||   ||||||  |||||||||||||||||||||||||||    
T  39502706 gacattcctgaaaaaattggaagttacaatttttttttttaaaatctatgcataatatcatgggaat 39502772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 564 - 725
Target Start/End: Original strand, 44506136 - 44506297
Alignment:
Q  564 aaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgac 663  Q
    ||||||||| |||| ||| ||||||   | ||| ||||||||||||||||||||||||| ||||||||||||       |||||| | ||||||||| ||    
T  44506136 aaacacaaattatttccaggaataacatatctgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttaac 44506235  T
Q  664 attcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||| |||||| ||||||   ||||||||||||||||||||||||||    
T  44506236 attcctgaaaaaattggaaattacaattttttttttaaatctatgcataatatcatgggaat 44506297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 39499267 - 39499433
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||  || ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  39499267 gggaaacacaaattattttcaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 39499366  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa--aaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||     ||||||||||||||||||||||||||    
T  39499367 gacattcctgaaaaaattggaagttacaattttttttttttaaatctatgcataatatcatgggaat 39499433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 388
Target Start/End: Complemental strand, 48293526 - 48293396
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||||||  |||| ||||||||||||||||| |||| ||| ||| |||||| ||||||||| ||| |||||||||||||||  ||||||    
T  48293526 gtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaaaataaaatccgaacca 48293427  T
Q  358 aaccaatgcggtttggaatggatcagttggt 388  Q
    ||||||||||||||||  |||||| ||||||    
T  48293426 aaccaatgcggtttgggttggatcggttggt 48293396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 9034152 - 9033986
Alignment:
Q  561 gggaaacacaaactattcccatgaataa-acaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataact 659  Q
    |||||||||||| |||||||| |||||| | | || | |||||||||||| |||||||||||| ||||||||||||       ||||||   ||||||||    
T  9034152 gggaaacacaaattattcccaggaataacataccccgggaatgaaaatattaaaatttgattcttgggtatttgttaaaaaaagtgtttgacaaataact 9034053  T
Q  660 tgacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    ||||||||||| |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  9034052 tgacattcctggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 9033986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 258 - 381
Target Start/End: Complemental strand, 23450105 - 23449982
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    ||||||||||||||||||  |||| ||||||||||| ||||| |||||||||||| |||||| ||||||||| || |||||||||||| |||    ||||    
T  23450105 gtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaatataatccacacca 23450006  T
Q  358 aaccaatgcggtttggaatggatc 381  Q
    ||||||||||||||||| ||||||    
T  23450005 aaccaatgcggtttggattggatc 23449982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 4642381 - 4642470
Alignment:
Q  256 cggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaata 345  Q
    |||||| ||||||||||||| ||||| || |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  4642381 cggtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagtatgtagtttgatttggttcgattgacttttaaaata 4642470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 363
Target Start/End: Original strand, 20986367 - 20986488
Alignment:
Q  243 gggtgttt-cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaa 341  Q
    |||||||| |||||||||||  |||||||||||  ||||| ||||||| ||||||||| |||| ||||||| |||||| ||||||||| ||||||| |||    
T  20986367 gggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttcggttgacttataa 20986466  T
Q  342 aataaaatttgaaccaaaccaa 363  Q
    |||||||| |||||||||||||    
T  20986467 aataaaatatgaaccaaaccaa 20986488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 29052152 - 29051984
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||| || ||||||    || | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  29052152 gggaaacacaaattattctcaggaataacatgcccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 29052053  T
Q  661 gacattcctgaaaaaattggaagttacaa----cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||| |     ||||||   ||||||||||||||||||||||||||    
T  29052052 gacattcctggaaaaattggaagttactaatttttttttttttaaatctatgcataatatcatgggaat 29051984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 27743448 - 27743517
Alignment:
Q  478 taaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  27743448 taaacgcggacaaaaagtaatcctattttgtaagaaatacaaaagattaaaattttaatcattctctaag 27743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 29051950 - 29051850
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||       | ||||||||||||||| ||| |||||||    
T  29051950 tcatgggaataatggaagttatgagaagttactccattcccatgaacttttatacccaggaatatttttttctcaacctcataacaaatatgggtataat 29051851  T
Q  816 c 816  Q
    |    
T  29051850 c 29051850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 725
Target Start/End: Complemental strand, 128130 - 127968
Alignment:
Q  562 ggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttg 661  Q
    ||||||||||| ||||| || ||||||   ||| | ||||||||||||||||||||||||| ||  ||||||||       |||||| | ||||||||||    
T  128130 ggaaacacaaattattctcaggaataacatacccgggaatgaaaatatgaaaatttgattcttgaatatttgttaaaagatgtgttttgcaaataacttg 128031  T
Q  662 acattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||  |||||||  ||||||||| ||||||   ||||||||||||||||| ||||||||    
T  128030 acattccttgaaaaattaaaagttacaa-tttttttttaaatctatgcataatattatgggaat 127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 36106545 - 36106435
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggttt-gttttggttcgattgacttttaaaataaaatttg 352  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||| |||| ||  ||| ||||| | ||||||||| |||||||||||||||||||  |    
T  36106545 tgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttcggttgacttttaaaataaaatccg 36106446  T
Q  353 aaccaaaccaa 363  Q
    |||||||||||    
T  36106445 aaccaaaccaa 36106435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 547
Target Start/End: Original strand, 41325635 - 41325712
Alignment:
Q  470 caatgttttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||| ||||||||||||||||| |||||| ||| |||||||||| |||  ||||||||||||||||||||    
T  41325635 caatgttttaaatgtggacaaaaagtaatcttattttataaaaaatacaaaagactcgaatttttatcattctctaag 41325712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 4642695 - 4642763
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||    
T  4642695 aaacgtggacaaaaagtaatcctattttataagaaatacagaagacaaaaattttaatcattctctaag 4642763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 19753637 - 19753537
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  ||||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  19753637 gttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaacca 19753538  T
Q  363 a 363  Q
    |    
T  19753537 a 19753537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 19786169 - 19786269
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  ||||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  19786169 gttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaacca 19786268  T
Q  363 a 363  Q
    |    
T  19786269 a 19786269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 816
Target Start/End: Complemental strand, 127948 - 127849
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||  ||| |||| ||||||||||||||| ||||||| ||||||| ||||||||       | ||||||||||||||||||||||||||||    
T  127948 catgggaataatagaagttatgggaagttacttcattcccatgaacctttatactcaggaatatttttttctcaacctcataacaaacatgagtataatc 127849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 598 - 725
Target Start/End: Original strand, 37995504 - 37995631
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttta 697  Q
    ||||||||||||||||||||||||| ||||||||||||        ||||| | ||||||||||| ||| ||| |||||||| ||||||||  ||||||     
T  37995504 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaaatgtttggcaaataacttgatatttctggaaaaattgaaagttacattttttttt 37995603  T
Q  698 aaaaatctatgcataatatcatgggaat 725  Q
     | ||| |||| ||||||||||||||||    
T  37995604 tagaatatatgtataatatcatgggaat 37995631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 45464151 - 45464252
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||||||||||||  | ||| |||| | ||| ||| |||||| | |||||||||| ||||| ||||||||||||||||| |||||||||    
T  45464151 gtttggttcggttttgagactaaaaattatctgaactgtaagataagtaagtacgcggtttgttttagttcgtttgacttttaaaataaattttgaacca 45464250  T
Q  358 aa 359  Q
    ||    
T  45464251 aa 45464252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 8484922 - 8484990
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||| |||||||||||||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||    
T  8484922 aaacatggacaaaaagtaatcatattttataagaaatgcaaaagactaaaattttaatcattctctaag 8484990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 547
Target Start/End: Original strand, 21069309 - 21069373
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||| ||||||||||||||||||    
T  21069309 gtggacaaaaagtaatcatattatgtaagaaatgcaaaagactaaattttttatcattctctaag 21069373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 23449819 - 23449751
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| || ||| ||||||    
T  23449819 aaacgtggacaaaaaataatcctattttgtaaaaaattcaaaaaactaaaattttaataattttctaag 23449751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 542
Target Start/End: Complemental strand, 1564895 - 1564836
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattct 542  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  1564895 gtggacaaaaaataatcctattttgtaagaaatacaaaagagtaaaattttaatcattct 1564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 9033953 - 9033853
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| ||||  |||||||| ||||| || |||| ||||||||||||||||       | |||||||||||||||||||||||||||    
T  9033953 tcatgggaataatggaagttatggaaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgagtataat 9033854  T
Q  816 c 816  Q
    |    
T  9033853 c 9033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 40591054 - 40590954
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| |||||| |||||||||       | |||||||||||||||||||||||||||    
T  40591054 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatatccaggaatatttttttctcaacctcataacaaacatgagtataat 40590955  T
Q  816 c 816  Q
    |    
T  40590954 c 40590954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 632
Target Start/End: Complemental strand, 51790309 - 51790234
Alignment:
Q  557 tttggggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtattt 632  Q
    |||||||||||||||| |||||||||||||||   || || ||||||||||||||||||||||||| || ||||||    
T  51790309 tttggggaaacacaaattattcccatgaataacatacatgggaatgaaaatatgaaaatttgattcatgagtattt 51790234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 56080812 - 56080912
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| ||||  |||||||| ||||| || |||| ||||||||||||||||       | |||||||||||||||||||||||||||    
T  56080812 tcatgggaataatggaagttatggaaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgagtataat 56080911  T
Q  816 c 816  Q
    |    
T  56080912 c 56080912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 24072591 - 24072690
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  24072591 catgggaataatggaagttatgggaagttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 24072690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 5122509 - 5122400
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| |||||   |||| |||| |||| ||| ||| |||||| ||||||||| |||||||| ||||||||||  ||    
T  5122509 tgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttcggttgactttaaaaataaaatccga 5122410  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  5122409 accaaaccaa 5122400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 21069003 - 21069112
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||||||||| |||||||  |||| ||||| ||||| ||||  ||||||| ||||  ||||| || |||| | |||||||||||||| ||||| ||    
T  21069003 tgcggtttagttcgattttgaggttaaaagtcattcgaactgcaaaataaataaatatgcagtttggttcggtttggttgacttttaaaattaaattcga 21069102  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  21069103 accaaaccaa 21069112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 696
Target Start/End: Complemental strand, 45620482 - 45620385
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttt 696  Q
    ||||||||||| ||||||||||||| |||||||||| |       |||||| | |||||||||||||||||||  ||||||||||||||||| ||||||    
T  45620482 gaatgaaaatacgaaaatttgattcctgggtatttgctaaaaaaagtgttt-gcaaataacttgacattcctgggaaaattggaagttacaattttttt 45620385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 29232760 - 29232844
Alignment:
Q  304 ataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    |||||| || |||||| ||| ||||| |||||||||||||||||||  |||| ||||||||||| |||||| |||||| ||||||    
T  29232760 ataagtttgcggtttggtttagttcggttgacttttaaaataaaatccgaactaaaccaatgcgatttggattggatcggttggt 29232844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 35014523 - 35014589
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatac-aaaaaactaaaatttttatcattctcta 545  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||| |||||||||||||||    
T  35014523 aaacgtggacaaaaaataatcttattttgtaagaaatgcaaaaaaactaaaa-ttttatcattctcta 35014589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 51790105 - 51790005
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||||||||||||||||||| ||  ||| |||||| | |||||||       |  ||||||||||||||||||||||||||    
T  51790105 tcatgggaataatggaagttatgagaagttacttcattctcacaaacctttatatctaggaatatttttttctaaacctcataacaaacatgagtataat 51790006  T
Q  816 c 816  Q
    |    
T  51790005 c 51790005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 381
Target Start/End: Original strand, 41325050 - 41325175
Alignment:
Q  251 cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    ||||| ||||| |||||||||| ||| | || |||||  ||||||| || |||||||||||| |||||| |||  |||| ||||||||||||||          
T  41325050 cgatgtggtttggttcggttttaagattgaaagtcatttgaaccgcgagataaataagtatgcggtttgatttaattcggttgacttttaaaatcc---- 41325145  T
Q  351 tgaaccaaaccaatgcggtttggaatggatc 381  Q
     ||||||||||||||||||||||| ||||||    
T  41325146 -gaaccaaaccaatgcggtttggattggatc 41325175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 48653684 - 48653622
Alignment:
Q  479 aaacgtggacaaaaa-gtaatcctattttgtaagaaatacaaaaaactaaaatttttatcatt 540  Q
    ||||||||||||||| |||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  48653684 aaacgtggacaaaaaagtaatcttattttgttagaaatacaaaagactaagatttttatcatt 48653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 8484660 - 8484729
Alignment:
Q  291 aaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaac 360  Q
    ||||||||| ||||||| |||| ||||||| ||| |||| ||||||||||||||||||  ||||||||||    
T  8484660 aaccgcaagataaataactatgcggtttgtgttgattcggttgacttttaaaataaaacatgaaccaaac 8484729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 23120358 - 23120273
Alignment:
Q  278 taaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||| ||||||||||||||||| |||| ||| ||| |||||| |||||||||||||||||| |||| || ||   |||||||||||    
T  23120358 taaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgactttaaaaaaaacatccaaaccaaaccaa 23120273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 544
Target Start/End: Original strand, 28148018 - 28148079
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctct 544  Q
    ||||| ||||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||    
T  28148018 gtggataaaaagtaatcatattttgtaagaaattcaaaagactaaaattttaataattctct 28148079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 816
Target Start/End: Original strand, 44506332 - 44506430
Alignment:
Q  718 atgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    |||||||||||| ||| |||| ||||||||| ||||| || |||| |||||||||| |||||       | ||||||||||||||||||| ||||||||    
T  44506332 atgggaataatggaagttatgggaagttactccattcccaagaacctttatacccaagaatatttttttctcaacctcataacaaacatgggtataatc 44506430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 48602606 - 48602510
Alignment:
Q  292 accgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    |||||||| |||| | || || |||||| ||||||||| |||||||| |||||| |||   |||||||||||||||||||||  |||||| ||||||    
T  48602606 accgcaagataaaaatgtttgcggtttggtttggttcggttgactttgaaaatacaatcctaaccaaaccaatgcggtttgggttggatcggttggt 48602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 49640860 - 49640920
Alignment:
Q  309 tatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggt 369  Q
    |||| |||||| |||| || | |||||||||||||||||||| ||||||||||||||||||    
T  49640860 tatgcggtttgatttgatttggttgacttttaaaataaaattcgaaccaaaccaatgcggt 49640920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 7784549 - 7784478
Alignment:
Q  310 atgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatc 381  Q
    |||| ||||| |||||||| ||| | |||||||||||||| |||| ||||||||||||||||| | ||||||    
T  7784549 atgtagtttggtttggttccattcagttttaaaataaaatatgaatcaaaccaatgcggtttgaagtggatc 7784478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 19753338 - 19753267
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| ||  |||||| |||||| ||||||||||||| ||||    
T  19753338 tttaaacgtggacaaaaagtaattaaattttgtaaaaatcacaaaagactaaattttttatcattctttaag 19753267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 19786468 - 19786539
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| ||  |||||| |||||| ||||||||||||| ||||    
T  19786468 tttaaacgtggacaaaaagtaattaaattttgtaaaaatcacaaaagactaaattttttatcattctttaag 19786539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 533
Target Start/End: Original strand, 6102141 - 6102191
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||||    
T  6102141 gtggacaataagtaatcctattttgtatgaaatgcaaaaaactaagatttt 6102191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 529
Target Start/End: Complemental strand, 23625733 - 23625683
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaa 529  Q
    |||||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  23625733 aaacgtggacaaaaagtaattctattttataagaaatacataagactaaaa 23625683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 48338303 - 48338407
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||| ||  |||| ||||||||||||| ||| |||| ||  |||  ||||| ||||||||| |||||||||||||||||||   |||||    
T  48338303 gtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaac-atgcagtttggtttggttcggttgacttttaaaataaaatccaaacca 48338401  T
Q  358 aaccaa 363  Q
    ||||||    
T  48338402 aaccaa 48338407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 5262092 - 5262000
Alignment:
Q  251 cgatgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||||||  ||||||||||||  |||| ||||||| ||||||||| |||| ||| ||| |||||| ||| ||||  |||| ||||||||    
T  5262092 cgatgcggtttgattcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaaaa 5262000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 20986644 - 20986716
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctatttt-gtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||| ||||||||||||||| | |||| ||||||||||||||| |||||||  ||| | ||||||||||    
T  20986644 tttaaacgcggacaaaaagtaatcatttttttgtaagaaatacaaaagactaaaaaatttgttattctctaag 20986716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 28147750 - 28147846
Alignment:
Q  267 ggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||||||||  ||||| ||||| |||||| ||| |||||||||| | |||||| ||| |||   ||||||||||||||| ||| ||| |||||||||    
T  28147750 ggttttgaggttaaacatcatctgaaccgtaagataaataagtaggcggtttggtttagttttgttgacttttaaaatataatctgatccaaaccaa 28147846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 15724142 - 15724196
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||| ||||||||| ||||||||||||| |||||||| ||||| ||||| |||||    
T  15724142 aaacatggacaaaatgtaatcctattttttaagaaatgcaaaagactaagatttt 15724196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 23625979 - 23625917
Alignment:
Q  301 taaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||| ||||||| |||||  ||||||||| ||||||||||||||||||| |||| ||| ||||    
T  23625979 taaaaaagtatgcggttttgtttggttcgcttgacttttaaaataaaatctgaatcaacccaa 23625917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 716 - 778
Target Start/End: Original strand, 39502805 - 39502867
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaat 778  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| |||||||| ||||||    
T  39502805 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacctaggaat 39502867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 343
Target Start/End: Complemental strand, 40806940 - 40806854
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    ||||| |||||||||||||  |||| ||||||| |||||| || |||| ||| ||| | |||| ||||||||| |||| ||||||||    
T  40806940 ggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggttgatttttaaaa 40806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 29233002 - 29233066
Alignment:
Q  485 ggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaa--atttttatcattctctaag 547  Q
    ||||||||||||||| |||||| ||||||||| |||| |||| |   ||||||||||||||||||    
T  29233002 ggacaaaaagtaatcttattttctaagaaatataaaagactatattttttttatcattctctaag 29233066  T

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Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 40900208 - 40900119
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||| |||||||||||||  |||| ||||||| ||| || || |||| ||| ||| |||||| ||||||||  |||| ||||||||    
T  40900208 tgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttgatttttaaaa 40900119  T

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Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 529
Target Start/End: Complemental strand, 45150792 - 45150739
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaa 529  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||||    
T  45150792 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaaa 45150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 7e-39; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 2734865 - 2735031
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    ||||||||||||||||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  2734865 gggaaacacaaactattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 2734964  T
Q  661 gacattcctgaaaaaattggaagttacaa--cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| ||||||||||||||||||   ||||||  |||||||||||||||||||||||||||    
T  2734965 gacattcctggaaaaattggaagttacaatttttttttttaaaatctatgcataatatcatgggaat 2735031  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 38526500 - 38526663
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||| ||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| || |||||||||       |||||| | |||||||||    
T  38526500 gggaaacataaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgagtatttgttaaaaaaagtgtttggcaaataactt 38526599  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  38526600 gacattcctgaaaaaattggaagttacaa-ttttttttaaaatctatgcataatatcatgggaat 38526663  T

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Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 598 - 725
Target Start/End: Complemental strand, 35563886 - 35563759
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaactttttta 697  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||| | ||||||||||||||||||| |||||||||||||||||| ||||||     
T  35563886 gaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcctggaaaaattggaagttacaatttttttt 35563787  T
Q  698 aaaaatctatgcataatatcatgggaat 725  Q
      ||||||||||||||||||||||||||    
T  35563786 ttaaatctatgcataatatcatgggaat 35563759  T

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Target: chr8; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 38567708 - 38567543
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  38567708 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttcaaaaaagtgtttggcaaataactt 38567609  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa-aaatctatgcataatatcatgggaat 725  Q
    ||||||| || |||||||||||||||||| ||||||    ||||||||||||||||||||||||||    
T  38567608 gacattcttggaaaaattggaagttacaatttttttttttaaatctatgcataatatcatgggaat 38567543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 816
Target Start/End: Complemental strand, 11661460 - 11661196
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||  | ||||||||||||||||||||||||| |  |||||||||       |||||| | |||||||||    
T  11661460 gggaaacacaaattattcccaagaataagatactcgggaatgaaaatatgaaaatttgattcttaagtatttgttaaaaaaagtgtttggcaaataactt 11661361  T
Q  661 gacattcctgaaaaaattggaagttacaactttt-ttaaaaaatctat--------gcataatatcatgggaataatgaaaggtatgagaagttacttca 751  Q
    ||||||| ||||||||||||||||||||| |||| ||   ||||||||        | ||||  |||||||||||||| ||| |||| ||||||||| ||    
T  11661360 gacattcttgaaaaaattggaagttacaatttttgtttttaaatctatttacatgggaataaattcatgggaataatggaagttatgggaagttactcca 11661261  T
Q  752 ttcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||| || |||| ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  11661260 ttcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 11661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 41486485 - 41486650
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   | | | || |||||||||||||||||||||| ||| ||||||||       |||||| | |||||||||    
T  41486485 gggaaacacaaattattcccaggaataacatatccgggactgaaaatatgaaaatttgattcttggatatttgttaaaaaaagtgtttggcaaataactt 41486584  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| | ||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  41486585 gacattcctggataaattggaagttacaattttttttttaaaatctatgcataatatcatgggaat 41486650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 1197745 - 1197577
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| ||||| || ||||||   | | | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  1197745 gggaaacacaaattattctcaggaataacatatccgggaatgaaaatatgaaaatttgattcctgggtatttgttaaaaaaagtgtttggcaaataactt 1197646  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa----aaatctatgcataatatcatgggaat 725  Q
    |||||||| |||||||||||||||||||| ||| ||  |    ||||||||||||||||||||||||||    
T  1197645 gacattccagaaaaaattggaagttacaattttattttattttaaatctatgcataatatcatgggaat 1197577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 561 - 696
Target Start/End: Original strand, 9686381 - 9686516
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       ||||||   |||||||||    
T  9686381 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttgtcaaataactt 9686480  T
Q  661 gacattcctgaaaaaattggaagttacaactttttt 696  Q
    |||||||||| |||||||||||||||||| ||||||    
T  9686481 gacattcctggaaaaattggaagttacaattttttt 9686516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 18916338 - 18916170
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||| | ||||||   ||||| ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||| ||    
T  18916338 gggaaacacaaattattccgaggaataacatacctgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataattt 18916239  T
Q  661 gacattcctgaaaaaattggaagttacaact----tttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| |    |||||   ||||||||| ||||||||||||||||    
T  18916238 gacattcctggaaaaattggaagttacaatttttattttttttaaatctatgtataatatcatgggaat 18916170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 24682215 - 24682107
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||| || ||||||||||||| |||||  |||||||||||||||| ||||||||||||  ||||| |||| ||||||||||||||||||||||| | ||    
T  24682215 tgcggcttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagtatgcagtttggtttgattcgattgacttttaaaataaaa-tcga 24682117  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  24682116 accaaaccaa 24682107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 257 - 380
Target Start/End: Complemental strand, 7428555 - 7428432
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacc 356  Q
    ||||| |||||||| ||||  |||| |||||| |||||||| | |||| | | ||| |||||| ||||||||| |||||||||||||||||||| |||||    
T  7428555 ggtttggttcggttatgaggttaaaagtcatctgaaccgcatgataaaaatgcatgcggtttggtttggttcggttgacttttaaaataaaattcgaacc 7428456  T
Q  357 aaaccaatgcggtttggaatggat 380  Q
    |||| ||||||||||||| |||||    
T  7428455 aaactaatgcggtttggattggat 7428432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 4785202 - 4785302
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    |||||||||||||| |||| ||||| |||||||||   |||| ||||||| |||||| ||||||||| ||||||||||||||| ||| ||||||||||||    
T  4785202 gttcggttttgagattaaaagtcatacgaaccgcagaataaaaaagtatgcggtttgatttggttcggttgacttttaaaatataatatgaaccaaacca 4785301  T
Q  363 a 363  Q
    |    
T  4785302 a 4785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 11219204 - 11219272
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  11219204 aaacgtagacaaaaagtaatcctattttgtaagaaatacacaagactaaaattttaatcattctctaag 11219272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 22811298 - 22811194
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||| | ||||||| ||||| |||||| |||| ||||| |||||| |||||  ||||| ||||||||| |||||||||||||||||||||||    
T  22811298 tgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgtatgctgtttggtttggttcggttgacttttaaaataaaatttga 22811199  T
Q  354 accaa 358  Q
    |||||    
T  22811198 accaa 22811194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 24681922 - 24681854
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  24681922 aaacgtggacaaaaagtactcctattttgtaagaaatataaaagactaaaattttaatcattctctaag 24681854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 11218907 - 11219000
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaa 347  Q
    |||||||| ||||| ||||||| ||||| |||||||||| |||||| |||||||||||| | |||| ||||||| | |||||||||||||||||    
T  11218907 tgcggtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagtatgcgatttggtttggtttggttgacttttaaaataaa 11219000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 4785489 - 4785557
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||| ||||||    
T  4785489 aaacgtggacaaaaagtaatccaactttgtaagaaatacaaaagactaaattttttatcattatctaag 4785557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 13325549 - 13325617
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  13325549 aaacgtgaacaaaaagtaatcatattttgtaagaaatgcaaaagactaaaattttaatcattctctaag 13325617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 37162484 - 37162417
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||||||    
T  37162484 aaacgtggacaaaaagtaatcttattttgtaa-aaatacaaaagactaaaattttaatcattctctaag 37162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 12193514 - 12193451
Alignment:
Q  323 tggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttg 386  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||    
T  12193514 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttg 12193451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 12437942 - 12437879
Alignment:
Q  323 tggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatcagttg 386  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||    
T  12437942 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttg 12437879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 643 - 725
Target Start/End: Original strand, 2001406 - 2001488
Alignment:
Q  643 gtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
    |||||| |||||||||||||||||| |  |||||||| ||||||||| ||||||  |||||||||||||||||||||| ||||    
T  2001406 gtgtttggtaaataacttgacattcttagaaaaattgaaagttacaaattttttttaaaatctatgcataatatcatgagaat 2001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 44336729 - 44336839
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaag-ttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttg 352  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||| | ||| ||  ||| |||||| ||||||||| ||||||||||||||| |||  |    
T  44336729 tgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgacttttaaaatacaatccg 44336828  T
Q  353 aaccaaaccaa 363  Q
    |||||||||||    
T  44336829 aaccaaaccaa 44336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 33565916 - 33566023
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataa--gtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||| ||| ||||||||| ||||| |||||  |||||||||| |||| ||  ||||| |||||| ||||||||| ||||||| |||||||||||| ||||    
T  33565916 gtttggtttggttttgaggctaaaagtcatttgaaccgcaagataaaaaaaagtatgcggtttggtttggttcggttgacttctaaaataaaattcgaac 33566015  T
Q  356 caaaccaa 363  Q
    ||||||||    
T  33566016 caaaccaa 33566023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 543
Target Start/End: Original strand, 33566190 - 33566254
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctc 543  Q
    |||||||||||||||||||| | | |||||||||||||||||| |||||||||| ||||||||||    
T  33566190 aaacgtggacaaaaagtaattcaactttgtaagaaatacaaaagactaaaatttatatcattctc 33566254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 36340876 - 36340776
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  ||||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  36340876 gttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaacca 36340777  T
Q  363 a 363  Q
    |    
T  36340776 a 36340776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 476 - 542
Target Start/End: Original strand, 1271388 - 1271453
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattct 542  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||    
T  1271388 tttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagact-agatttttatcattct 1271453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 9012668 - 9012602
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||||| |||||||||||||| ||||||||||||||| |||||| |||| | ||||||||||||||||    
T  9012668 aaacgttgacaaaaagtaatcttattttgtaagaaatgcaaaaagctaaga-ttttatcattctctaa 9012602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 11017257 - 11017328
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  11017257 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 11017328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Complemental strand, 18916137 - 18916037
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| ||||||||| ||||| || |||| ||||||||||| ||||       | ||||||||||||||||||| |||||||    
T  18916137 tcatgggaataatggaagttatgggaagttactccattcccaggaacctttatacccagaaatatttttttctcaacctcataacaaacatgggtataat 18916038  T
Q  816 c 816  Q
    |    
T  18916037 c 18916037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 725
Target Start/End: Original strand, 24697558 - 24697726
Alignment:
Q  557 tttggggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgtt------nnnnnnngtgtttag 650  Q
    |||||||||||| ||| |||||| | ||||||   || || ||||||||||||||||||||||||| ||||||||||||             |||||| |    
T  24697558 tttggggaaacataaattattcctaggaataacatacatgggaatgaaaatatgaaaatttgattcatgggtatttgttaaaaaaaaaaaaagtgtttgg 24697657  T
Q  651 taaataacttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatgggaat 725  Q
     |||||||||||||||||||  |||||||||||||| || ||||      |||||||||| ||||||||||||||    
T  24697658 aaaataacttgacattcctgggaaaattggaagttataattttt------aatctatgcagaatatcatgggaat 24697726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 36340582 - 36340511
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  36340582 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 36340511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 38526696 - 38526796
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||||||||||||| ||||| || |||| |||||||| || ||||       | ||||||||||||||||||| |||||||    
T  38526696 tcatgggaataatggaagttatgagaagttactccattcccaggaacctttatacctagaaatatttttttctcaacctcataacaaacatgggtataat 38526795  T
Q  816 c 816  Q
    |    
T  38526796 c 38526796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 816
Target Start/End: Original strand, 41486683 - 41486783
Alignment:
Q  716 tcatgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    |||||||||||||| ||| |||| || |||||| ||||| || |||| ||||||||||||||||       | ||||||||||||||||||| |||||||    
T  41486683 tcatgggaataatggaagttatgggaggttactccattcccaggaacctttatacccaggaatatttttttctcaacctcataacaaacatgggtataat 41486782  T
Q  816 c 816  Q
    |    
T  41486783 c 41486783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 10661111 - 10661229
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| ||||||| |||||| || |||| ||| ||| |||||| ||||||||| |||| ||||||||    ||   |    
T  10661111 tgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaaagtcatccaa 10661210  T
Q  354 accaaaccaatgcggtttg 372  Q
    |||||||||||||||||||    
T  10661211 accaaaccaatgcggtttg 10661229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 33068223 - 33068312
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaa 343  Q
    |||||||| |||||||||||||  |||| ||||||| ||||||||| |||| ||| ||| |||||| ||||||||  |||| ||||||||    
T  33068223 tgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgatttttaaaa 33068312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 22811024 - 22810957
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||| |  ||||||||||||||||||||| | ||||||||| |||||||| ||||    
T  22811024 aaacgtggacaaaaagtattt-tattttgtaagaaatacaaaagattaaaattttaatcattctataag 22810957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 12660322 - 12660255
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggat 380  Q
    ||||||| ||||||||| |||| ||| ||||||||||  ||||||||| ||||||||||||| |||||    
T  12660322 tggtttggtttggttcggttgagtttaaaaataaaatccgaaccaaacaaatgcggtttggattggat 12660255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 12883855 - 12883780
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcg 329  Q
    |||||||| |||||||||||||  |||| ||||| |||||| |||  |||||||||||| |||||| |||||||||    
T  12883855 tgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttggttcg 12883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 479 - 546
Target Start/End: Original strand, 28441719 - 28441785
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||| ||||||| |||||||||| |||||    
T  28441719 aaacgtggaaaaaaagtaatcgtattttttaagaaatgcaaaagactaaaa-ttttatcattatctaa 28441785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 6591244 - 6591294
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| ||||||||| ||||||||||||||||||||  |||||||||||    
T  6591244 tggtttggtttggttcggttgacttttaaaataaaattctaaccaaaccaa 6591294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 12193296 - 12193242
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    ||||||| | ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  12193296 aaacgtgcataaaaagtaatcatattttgtaagaaatacaaaagactaaattttt 12193242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 12437724 - 12437670
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    ||||||| | ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  12437724 aaacgtgcataaaaagtaatcatattttgtaagaaatacaaaagactaaattttt 12437670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 40436455 - 40436533
Alignment:
Q  315 gtttgttttggttcgattgacttttaaaataaaattt-----gaaccaaaccaatgcggtttggaatggatcagttggt 388  Q
    ||||| ||||||||| |||||||| ||||||||||||     ||||||||||||||||||||||  |||||| ||||||    
T  40436455 gtttggtttggttcggttgactttaaaaataaaatttgaaccgaaccaaaccaatgcggtttgggttggatcggttggt 40436533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 28073293 - 28073196
Alignment:
Q  277 ctaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttgga 374  Q
    ||||| |||||| |||||||||  |||| ||  |||||||||  ||||||||  |||||||||||||| |||   |||||||||||||| ||||||||    
T  28073293 ctaaaagtcatctgaaccgcaatataaaaaaacatgtggtttagtttggttcagttgacttttaaaatgaaaaccgaaccaaaccaatgtggtttgga 28073196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 483 - 547
Target Start/End: Complemental strand, 30253578 - 30253515
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||||| |||||| | ||| |||||| |||| || ||||||||||    
T  30253578 gtggacaaaaagtaatcctattttgttagaaattc-aaagactaaagttttaattattctctaag 30253515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 44672750 - 44672866
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||||||  |||| ||||||| || ||| || |||| ||  ||| |||||| |||||||||||||| ||||||||    ||   |||||    
T  44672750 gtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaacatgcggtttggtttggttcgattgatttttaaaaagtcatccaaacca 44672849  T
Q  358 aaccaatgcggtttgga 374  Q
    |||||||||||||||||    
T  44672850 aaccaatgcggtttgga 44672866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 6616939 - 6616989
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| |||| |||| ||||||||||||||||||||  |||||||||||    
T  6616939 tggtttggtttgtttcggttgacttttaaaataaaattctaaccaaaccaa 6616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 41346164 - 41346202
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaa 521  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  41346164 gtggacaaaaagtaatcttattttgaaagaaatacaaaa 41346202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 43596201 - 43596238
Alignment:
Q  652 aaataacttgacattcctgaaaaaattggaagttacaa 689  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  43596201 aaataatttgacattcctgaaaaaattgaaagttacaa 43596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 1e-37; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 22213282 - 22213447
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  22213282 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 22213381  T
Q  661 gacattcctgaaaaaattggaagttacaa-cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||||||| |||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  22213382 gacattcttgaaaaaattggaagttacaattttttttttaaaatctatgcataatatcatgggaat 22213447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 25898112 - 25897946
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  25898112 gggaaacacaaattattcccaggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 25898013  T
Q  661 gacattcctgaaaaaattggaagttacaacttttttaaa--aaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||||| ||||||     ||||||||||||||||||||||||||    
T  25898012 gacattcctgaaaaaattggaagttacaattttttttttttaaatctatgcataatatcatgggaat 25897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 36275551 - 36275717
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||| ||| ||||||   ||  | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  36275551 gggaaacacaaattatttccaggaataacatactcgggaatgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataactt 36275650  T
Q  661 gacattcctgaaaaaattggaagttacaactttttt--aaaaaatctatgcataatatcatgggaat 725  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  36275651 gacattcctggaaaaattggaagttacaatttttttaaaaaaaatctatgcataatatcatgggaat 36275717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 564 - 725
Target Start/End: Complemental strand, 30494069 - 30493906
Alignment:
Q  564 aaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgac 663  Q
    ||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||  ||||||||||||       |||||| | ||||||||||||    
T  30494069 aaacacaaattattcccaggaataatatacccgggaatgaaaatatgaaaatttgattattgggtatttgttaaaaaaagtgtttggcaaataacttgac 30493970  T
Q  664 attcctgaaaaaattggaagttacaacttttttaaa--aaatctatgcataatatcatgggaat 725  Q
    ||||||| |||||||||||||||||| ||||||     ||||||||||||||||||||||||||    
T  30493969 attcctggaaaaattggaagttacaattttttttttttaaatctatgcataatatcatgggaat 30493906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 564 - 725
Target Start/End: Complemental strand, 30534412 - 30534249
Alignment:
Q  564 aaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgac 663  Q
    ||||||||| |||||||| ||||||   ||| | ||||||||||||||||||||||||  ||||||||||||       |||||| | ||||||||||||    
T  30534412 aaacacaaattattcccaggaataatatacccgggaatgaaaatatgaaaatttgattattgggtatttgttaaaaaaagtgtttggcaaataacttgac 30534313  T
Q  664 attcctgaaaaaattggaagttacaacttttttaaa--aaatctatgcataatatcatgggaat 725  Q
    ||||||| |||||||||||||||||| ||||||     ||||||||||||||||||||||||||    
T  30534312 attcctggaaaaattggaagttacaattttttttttttaaatctatgcataatatcatgggaat 30534249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 557 - 723
Target Start/End: Original strand, 26945674 - 26945840
Alignment:
Q  557 tttggggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaata 656  Q
    |||||||||||||||| |||| |||  |||||   |  || ||||||||||||||||||||||||| || |||||||||       |||||| | |||||    
T  26945674 tttggggaaacacaaattatttccagaaataacatatatgggaatgaaaatatgaaaatttgattcttgtgtatttgttaaaaaaagtgtttggcaaata 26945773  T
Q  657 acttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatggga 723  Q
    |||||||||||||| |||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  26945774 acttgacattcctggaaaaattggaagttacaattttttttttaaatctatgcataatattatggga 26945840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 557 - 723
Target Start/End: Original strand, 26674069 - 26674234
Alignment:
Q  557 tttggggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaata 656  Q
    |||||||||||||||| |||| |||  |||||   |  || ||||||||||||||||||||||||| || |||||||||       |||||| | |||||    
T  26674069 tttggggaaacacaaattatttccagaaataacatatatgggaatgaaaatatgaaaatttgattcttgtgtatttgttaaaaaaagtgtttggcaaata 26674168  T
Q  657 acttgacattcctgaaaaaattggaagttacaacttttttaaaaaatctatgcataatatcatggga 723  Q
    |||||||||||||| |||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  26674169 acttgacattcctggaaaaattggaagttacaa-tttttttttaaatctatgcataatattatggga 26674234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 600 - 725
Target Start/End: Complemental strand, 42394179 - 42394055
Alignment:
Q  600 atgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaacttttttaaa 699  Q
    ||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||||||||| || |||||||| ||||||||| ||||||       
T  42394179 atgaaaatatgaaaatttgattcttgggtatttgttaaaaaaagtgtttggcaaataacttgacattcatggaaaaattgaaagttacaa-ttttttttt 42394081  T
Q  700 aaatctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||||    
T  42394080 aaatctatgcataatatcatgggaat 42394055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 256 - 363
Target Start/End: Complemental strand, 22747695 - 22747589
Alignment:
Q  256 cggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac 355  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||||     ||| |||||| |||||||||||||||||||||||||||||||||||    
T  22747695 cggtttagttcggttttgaggctaaa-gtcatccgaaccgcaagataaaagtacatgcggtttgatttggttcgattgacttttaaaataaaatttgaac 22747597  T
Q  356 caaaccaa 363  Q
     |||||||    
T  22747596 aaaaccaa 22747589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 27572170 - 27572061
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||| |||| ||| ||| |||||| ||||||||| ||| |||||||||||||||  ||    
T  27572170 tgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaaaataaaatccga 27572071  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  27572070 accaaaccaa 27572061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 36567692 - 36567813
Alignment:
Q  267 ggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgc 366  Q
    |||||||||  |||| || |||||||||| ||| | |||||||||| |||||| || |||| | ||||||||||||||||||||  ||||||||||||||    
T  36567692 ggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtttggttgacttttaaaataaaattcaaaccaaaccaatgc 36567791  T
Q  367 ggtttggaatggatcagttggt 388  Q
    |||||||| |||||| ||||||    
T  36567792 ggtttggattggatcggttggt 36567813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 25495339 - 25495407
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  25495339 aaacgtggacaaaaagtaatcttattttgtaagaaatacaaaagactaaaattttaatcattctctaag 25495407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 29411869 - 29411679
Alignment:
Q  17 aaaacccagttgggttggcttgcatttgaagatacacaaacctagtaaataggtggtac-aatgaaagtaagtactatccttgttattttattacgcggt 115  Q
    |||||| ||||||||||  | ||||||||||||||||||||||||||||||||| |||| |||||| ||||   |||   |||||   |||||||||  |    
T  29411869 aaaaccaagttgggttgagtagcatttgaagatacacaaacctagtaaataggtagtacgaatgaaggtaa--ccta--gttgtttaattattacgctat 29411774  T
Q  116 accaaaataaaagtaatggttaagatccaaattggcattaaaa----aggaatgaataaattgatggt-gaggattgctgttaagtaataaaact 205  Q
    ||||||| ||||| ||||||||| |||||| ||| ||||||||    || || ||||||||||||||| | |||||| |||||||||||||||||    
T  29411773 accaaaacaaaagcaatggttaaaatccaagttgacattaaaatggtagaaaggaataaattgatggtgggggattgttgttaagtaataaaact 29411679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 40884297 - 40884408
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| |||||||  |||| ||||| ||||||||||| |||| |||||||  ||||| ||| ||||| | ||||||||||||||||||| ||||||||||    
T  40884297 gttcgattttgaggttaaaagtcattcgaaccgcaagataaaaaagtatgctgtttggtttagttcggtcgacttttaaaataaaatttaaaccaaacca 40884396  T
Q  363 atgcggtttgga 374  Q
    |||| |||||||    
T  40884397 atgcagtttgga 40884408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 35240949 - 35240840
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| ||||| ||||||| |||||  |||||||||||| ||| | || ||||||| |||||| ||||||||| |||||||| ||||||||||  ||    
T  35240949 tgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgactttaaaaataaaatccga 35240850  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  35240849 accaaaccaa 35240840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 10090263 - 10090338
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcg 329  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||| |||||| ||| |||||    
T  10090263 tgcggtttggttcggttttgaggctaaaagtcatcagaaccgcaagataaataagtatgcggtttgatttagttcg 10090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 531
Target Start/End: Original strand, 10090484 - 10090531
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatt 531  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  10090484 tggacaaaaagtaatcctattttgtaagaaatacaaaagactaaaatt 10090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 34881149 - 34881087
Alignment:
Q  483 gtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||    
T  34881149 gtggacaaaaagtaatcgtattttgtaagaaatgcaaaaaactaaga-ttttatcattctctaa 34881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 36567961 - 36568032
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||||  ||| |||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||    
T  36567961 tttaaacgcagaccaaaagtaatcatattttgtaagaaatacaaaagactaaatattttatcattctctaag 36568032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 2588936 - 2589066
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| ||||| ||||||||||||| |||||  |||||| ||| |||| ||  ||| |||||| ||||||| | ||||||||||||||||| |  ||||||    
T  2588936 gtttggttcgattttgagactaaaagtcatttgaaccgtaagataaaaaaacatgcggtttggtttggtttggttgacttttaaaataaattcagaacca 2589035  T
Q  358 aaccaatgcggtttggaatggatcagttggt 388  Q
    || | |||||||||||  |||||| ||||||    
T  2589036 aatcgatgcggtttgggttggatcggttggt 2589066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 608 - 725
Target Start/End: Complemental strand, 13946526 - 13946403
Alignment:
Q  608 atgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttacaa---cttttttaa---aaa 701  Q
    ||||||||||||||| ||||||||||||        ||||| | ||||||||||||||| ||| ||||||||||||||||||    ||||||||    ||    
T  13946526 atgaaaatttgattcttgggtatttgttaaaaaaaatgtttggcaaataacttgacatttctggaaaaattggaagttacaattttttttttaattttaa 13946427  T
Q  702 atctatgcataatatcatgggaat 725  Q
    ||||||||||||||||||||||||    
T  13946426 atctatgcataatatcatgggaat 13946403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 363
Target Start/End: Original strand, 25495041 - 25495151
Alignment:
Q  253 atgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttg 352  Q
    ||||||||| ||||||||||||| ||||| ||||||  ||||||||  ||||||||||||  ||||| |||  |||| |||| ||||||||||||||  |    
T  25495041 atgcggtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagtatgcagtttggtttttttcggttgatttttaaaataaaatccg 25495140  T
Q  353 aaccaaaccaa 363  Q
    ||| |||||||    
T  25495141 aacaaaaccaa 25495151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 17132206 - 17132106
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  | ||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  17132206 gttcgattttgaggctaaattttatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaacca 17132107  T
Q  363 a 363  Q
    |    
T  17132106 a 17132106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 17131912 - 17131841
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  17131912 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 17131841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 32244208 - 32244137
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  32244208 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 32244137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 372
Target Start/End: Original strand, 36760138 - 36760189
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttg 372  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  36760138 tttggttcgattgacttttaaaataaaatccgaaccaaaccaatgtggtttg 36760189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 816
Target Start/End: Complemental strand, 30493886 - 30493787
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||| ||||||||| ||||| || |||  ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  30493886 catgggaataatggaagttatgggaagttactccattcccaggaatctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 30493787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 816
Target Start/End: Complemental strand, 30534229 - 30534130
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||| ||||||||| ||||| || |||  ||||||||||||||||       | ||||||||||||||||||| ||||||||    
T  30534229 catgggaataatggaagttatgggaagttactccattcccaggaatctttatacccaggaatatttttttctcaacctcataacaaacatgggtataatc 30534130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 41455119 - 41455181
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatca 538  Q
    |||||||| ||||||||||||||| ||||||||||||||||  ||| |||||| |||||||||    
T  41455119 tttaaacgcggacaaaaagtaatcatattttgtaagaaatatgaaagactaaattttttatca 41455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 598 - 688
Target Start/End: Original strand, 11740587 - 11740677
Alignment:
Q  598 gaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataacttgacattcctgaaaaaattggaagttaca 688  Q
    ||||||||||||||||||||||||| || |||||||||       |||||| | ||||||||||||||||||   ||||| ||||||||||    
T  11740587 gaatgaaaatatgaaaatttgattcctgtgtatttgttaaaaaaagtgtttggcaaataacttgacattccttggaaaataggaagttaca 11740677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 20192101 - 20191972
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaac- 355  Q
    ||||||||||||||||||   |||| |||||| |||| ||||| | || ||  ||||| |||| ||||||||| |||||||||||||||||||  ||||     
T  20192101 ggtttagttcggttttgatgttaaaagtcatctgaactgcaagattaaaaaacatgtgatttgatttggttcggttgacttttaaaataaaatccgaact 20192002  T
Q  356 ----caaaccaatgcggtttggaatggatc 381  Q
        ||||||||||||||||| | ||||||    
T  20192001 aaatcaaaccaatgcggtttgaattggatc 20191972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 40331615 - 40331510
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||||||||| |||||||| | || || ||| |||| ||||| | || ||  | |||||||| ||||||||| |||||||||||||||||||  ||    
T  40331615 tgcggtttagttcgattttgagatttaaagtaatctgaactgcaagatgaaaaaacacgtggtttggtttggttcggttgacttttaaaataaaatccga 40331516  T
Q  354 accaaa 359  Q
    ||||||    
T  40331515 accaaa 40331510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 545
Target Start/End: Complemental strand, 28224672 - 28224628
Alignment:
Q  501 tattttgtaagaaatacaaaaaactaaaatttttatcattctcta 545  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  28224672 tattttgtaagaaatacaaaagactaaaattttaatcattctcta 28224628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 32244492 - 32244396
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaa 359  Q
    ||||| |||||||  ||||  ||||| |||||| ||| | || ||||||| |||||| ||||||||| |||||||||||||||||||  ||||||||    
T  32244492 gttcgattttgaggttaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 32244396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 35240656 - 35240585
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    ||||||| |||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  35240656 tttaaacatggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 35240585  T

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Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 26674256 - 26674355
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||| ||||||||| |||||  | |||| ||||||||||||||||       | ||| ||||||||||||||| ||||||||    
T  26674256 catgggaataatggaagttatgggaagttactccattcctaggaacctttatacccaggaatatttttttctcaatctcataacaaacatgggtataatc 26674355  T

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Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 816
Target Start/End: Original strand, 26945862 - 26945961
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataatc 816  Q
    ||||||||||||| ||| |||| ||||||||| |||||  | |||| ||||||||||||||||       | ||| ||||||||||||||| ||||||||    
T  26945862 catgggaataatggaagttatgggaagttactccattcctaggaacctttatacccaggaatatttttttctcaatctcataacaaacatgggtataatc 26945961  T

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Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 33792898 - 33792952
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    |||||||||||||||| |||| |||||||||||||||| |||| | |||||||||    
T  33792898 aaacgtggacaaaaagcaatcatattttgtaagaaataaaaaagattaaaatttt 33792952  T

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Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 40692714 - 40692760
Alignment:
Q  487 acaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttt 533  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  40692714 acaaaaagtaatcatattttgtaagaaatacaaaagactaagatttt 40692760  T

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Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 41454880 - 41454930
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| || |||||| ||||||||||||||||||| |||||||||||||    
T  41454880 tggtttggttcggttcggttgacttttaaaataaaatctgaaccaaaccaa 41454930  T

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Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 2422823 - 2422891
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaatgcggtttggaatggatc 381  Q
    ||||||| ||||||| | ||||||||||||||| ||| || ||||||||||||| |||| || ||||||    
T  2422823 tggtttggtttggtttggttgacttttaaaatataatctggaccaaaccaatgcagtttagattggatc 2422891  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 546
Target Start/End: Original strand, 14652708 - 14652774
Alignment:
Q  479 aaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    |||| ||||||| | |||||||||||||||||||||| ||||| | ||| | ||||||||||||||||    
T  14652708 aaacatggacaatatgtaatcctattttgtaagaaattcaaaagattaaga-ttttatcattctctaa 14652774  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 538
Target Start/End: Original strand, 34087667 - 34087718
Alignment:
Q  487 acaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatca 538  Q
    ||||||||||||| ||||||| ||||||||||||| ||| || |||||||||    
T  34087667 acaaaaagtaatcatattttgaaagaaatacaaaagactgaattttttatca 34087718  T

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Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 363
Target Start/End: Original strand, 40692463 - 40692560
Alignment:
Q  264 ttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    |||||||||||| ||| | ||||| | ||| ||||| |||| ||| ||| | |||| ||||||||| |||||||||||||||||| ||||| ||||||||    
T  40692463 ttcggttttgaggctagaagtcattcaaactgcaagataaa-aagcatgcgatttggtttggttcggttgacttttaaaataaaa-ttgaatcaaaccaa 40692560  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 6633344 - 6633386
Alignment:
Q  321 tttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| | ||||||||||||||||||| |||||||||||||    
T  6633344 tttggtttggttgacttttaaaataaaatctgaaccaaaccaa 6633386  T

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Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 18432344 - 18432405
Alignment:
Q  484 tggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaa 546  Q
    ||||||||||||||| ||||| ||||||||||| |||| ||||| |  |||||||||||||||    
T  18432344 tggacaaaaagtaattctattatgtaagaaatataaaagactaaga-ctttatcattctctaa 18432405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 14652410 - 14652519
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||||||||| |||| ||  ||||  |||| ||||||  ||| |||| ||  ||| | |||| ||||||||  |||||||| |||||||||| |||    
T  14652410 tgcggtttagttcgattttaagtgtaaaaatcattcgaaccataagataaaaaaacatgcgatttgatttggttcagttgactttaaaaataaaatctga 14652509  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  14652510 accaaaccaa 14652519  T

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Target: scaffold0051 (Bit Score: 73; Significance: 6e-33; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 59032 - 59199
Alignment:
Q  561 gggaaacacaaactattcccatgaataaacaacctgagaatgaaaatatgaaaatttgattcgtgggtatttgttnnnnnnngtgtttagtaaataactt 660  Q
    |||||||||||| |||||||  ||||||   ||| | ||||||||||||||||||||||||| ||||||||||||       |||||| | |||||||||    
T  59032 gggaaacacaaattattcccgggaataacatacccgggaatgaaaatatgaaaatttgattcttgggtatttgttaagaaaagtgttttgcaaataactt 59131  T
Q  661 gacattcctgaaaaaattggaagttacaa---cttttttaaaaaatctatgcataatatcatgggaat 725  Q
    ||| |||||| ||||||||||||||||||    |||||| ||||||||||||||||||||||||||||    
T  59132 gacgttcctggaaaaattggaagttacaatttttttttttaaaaatctatgcataatatcatgggaat 59199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 815
Target Start/End: Original strand, 59219 - 59317
Alignment:
Q  717 catgggaataatgaaaggtatgagaagttacttcattcacatgaacttttatacccaggaatannnnnnncacaacctcataacaaacatgagtataat 815  Q
    ||||||||||||| ||| |||| ||||||||| ||||| ||||||| |||| |||||||||||       | ||||||||||||||||||| |||||||    
T  59219 catgggaataatggaagttatgggaagttactccattcccatgaacctttaaacccaggaatatttttttctcaacctcataacaaacatgggtataat 59317  T

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Target: scaffold0015 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 62366 - 62466
Alignment:
Q  263 gttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaaccaaacca 362  Q
    ||||| ||||||| |||||  ||||| |||||| ||| |||| ||||||| |||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  62366 gttcgattttgaggctaaatttcatctgaaccgtaagctaaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaacca 62465  T
Q  363 a 363  Q
    |    
T  62466 a 62466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 62660 - 62731
Alignment:
Q  476 tttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||||||||||   ||||||||| || ||||||| |||||| ||||||||||||| ||||    
T  62660 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaag 62731  T

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Target: scaffold0664 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 5953 - 6062
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    ||||||||  |||||||||||||||||| || ||| ||||||||| ||||| || ||||  | ||  |||| ||| ||||| ||||||||||||||| ||    
T  5953 tgcggtttgtttcggttttgagactaaaagtgatctgaaccgcaacttaaaaaaatatgcaggttagtttgtttcaattgatttttaaaataaaattcga 6052  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  6053 accaaaccaa 6062  T

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Target: scaffold0688 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 1119 - 1211
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||  |||||||||| | ||||||| |||| | |||||| ||||||    
T  1119 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa-aaacatgtggtttggtgtggttcggttgattcttaaaacaaaatt 1211  T

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Target: scaffold0688; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 7688 - 7780
Alignment:
Q  257 ggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatt 350  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||  |||||||||| | ||||||| |||| | |||||| ||||||    
T  7688 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa-aaacatgtggtttggtgtggttcggttgattcttaaaacaaaatt 7780  T

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Target: scaffold0204 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 25825 - 25929
Alignment:
Q  258 gtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttgaacca 357  Q
    |||| |||||||||| ||  |||| ||||||||||||| ||| |||| ||  |||  ||||| ||||||||| |||||||||||||||||||   |||||    
T  25825 gtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaac-atgcagtttggtttggttcggttgacttttaaaataaaatccaaacca 25923  T
Q  358 aaccaa 363  Q
    ||||||    
T  25924 aaccaa 25929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 14480 - 14589
Alignment:
Q  254 tgcggtttagttcggttttgagactaaacgtcatccgaaccgcaagttaaataagtatgtggtttgttttggttcgattgacttttaaaataaaatttga 353  Q
    |||||||| |||| |||||||   |||| ||||||||||||||||| |||| ||| ||| | |||| ||||||||  |||||| |||||  | |||  ||    
T  14480 tgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttggttcagttgactcttaaagcacaatccga 14579  T
Q  354 accaaaccaa 363  Q
    ||||||||||    
T  14580 accaaaccaa 14589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 6257 - 6307
Alignment:
Q  313 tggtttgttttggttcgattgacttttaaaataaaatttgaaccaaaccaa 363  Q
    ||||||| |||| |||| ||||||||||||||||||||  |||||||||||    
T  6257 tggtttggtttgattcggttgacttttaaaataaaattctaaccaaaccaa 6307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 20460 - 20398
Alignment:
Q  485 ggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||| |  ||| ||||||||||||  |||||||||| ||||||||| ||||    
T  20460 ggacaaaaagtaatccaacattgcaagaaatacaaatgactaaaatttgtatcattctgtaag 20398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 28352 - 28290
Alignment:
Q  485 ggacaaaaagtaatcctattttgtaagaaatacaaaaaactaaaatttttatcattctctaag 547  Q
    |||||||||||||||| |  ||| ||||||||||||  |||||||||| ||||||||| ||||    
T  28352 ggacaaaaagtaatccaacattgcaagaaatacaaatgactaaaatttgtatcattctgtaag 28290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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