View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9148_low_22 (Length: 253)
Name: NF9148_low_22
Description: NF9148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9148_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 40224540 - 40224317
Alignment:
| Q |
22 |
aattttatgctgcagtcatggccgaaattagccgtgaagaattggcttagtacaaagaacagttctgaaaagtttacctcagattattctgttacaggtg |
121 |
Q |
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| T |
40224540 |
aattttatgctgcagtcatggccgaaattagccgtgaagaattggcttagtacaaagaacagttctgaaaagtttacctcagattattctgttacaggtg |
40224441 |
T |
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| Q |
122 |
aaactcaattattttaattaagattgtgattggttttctttgagtttggtttcattttacgtttttcgtgttgaaattgagacattattttgtttaatct |
221 |
Q |
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| T |
40224440 |
aaactcaattattttaattaagattgtgattggttttctttgagtttggtttcattttacgtttttcgtgttgaaattgagacattattttgtttaatct |
40224341 |
T |
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| Q |
222 |
ttgtgggactcacacaggttctgc |
245 |
Q |
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||||||||||||| |||| ||||| |
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| T |
40224340 |
ttgtgggactcactcagggtctgc |
40224317 |
T |
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