View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9150_high_15 (Length: 527)

Name: NF9150_high_15
Description: NF9150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9150_high_15
NF9150_high_15
[»] chr8 (44 HSPs)
chr8 (3-174)||(44346217-44346389)
chr8 (3-176)||(43185361-43185535)
chr8 (11-172)||(29256911-29257073)
chr8 (10-170)||(14627-14787)
chr8 (10-169)||(31980047-31980210)
chr8 (3-164)||(40733641-40733803)
chr8 (1-172)||(29482339-29482510)
chr8 (10-169)||(31976666-31976829)
chr8 (3-170)||(33376829-33376999)
chr8 (1-173)||(29611705-29611875)
chr8 (55-170)||(33986431-33986546)
chr8 (55-170)||(1087846-1087961)
chr8 (55-169)||(10593507-10593620)
chr8 (55-172)||(35978590-35978707)
chr8 (55-168)||(26519984-26520097)
chr8 (20-172)||(34009088-34009240)
chr8 (55-174)||(24051706-24051825)
chr8 (10-174)||(9983036-9983201)
chr8 (55-168)||(13145018-13145131)
chr8 (55-168)||(24045398-24045511)
chr8 (57-173)||(44890034-44890150)
chr8 (55-170)||(36624810-36624925)
chr8 (64-166)||(31976122-31976224)
chr8 (55-172)||(28324221-28324338)
chr8 (60-176)||(43168098-43168214)
chr8 (59-170)||(28190231-28190342)
chr8 (55-168)||(8049611-8049724)
chr8 (110-168)||(36103250-36103308)
chr8 (110-170)||(30444806-30444866)
chr8 (62-168)||(34390392-34390489)
chr8 (77-168)||(10605977-10606068)
chr8 (112-170)||(23011885-23011944)
chr8 (124-170)||(7669139-7669185)
chr8 (4-157)||(7079680-7079825)
chr8 (107-155)||(8469885-8469933)
chr8 (63-170)||(14013269-14013375)
chr8 (63-130)||(26251865-26251932)
chr8 (55-105)||(15718590-15718640)
chr8 (79-176)||(6460490-6460587)
chr8 (112-169)||(26520509-26520565)
chr8 (81-141)||(8409253-8409313)
chr8 (131-170)||(13823458-13823497)
chr8 (98-168)||(15719406-15719476)
chr8 (129-170)||(6421788-6421829)
[»] chr2 (42 HSPs)
chr2 (3-190)||(1583312-1583500)
chr2 (3-170)||(44256015-44256183)
chr2 (3-170)||(7309436-7309604)
chr2 (3-170)||(769412-769581)
chr2 (3-170)||(33188789-33188958)
chr2 (3-173)||(35047198-35047369)
chr2 (3-170)||(39630607-39630775)
chr2 (3-168)||(11141686-11141852)
chr2 (4-173)||(13018127-13018297)
chr2 (55-170)||(3092680-3092795)
chr2 (59-170)||(19231017-19231127)
chr2 (3-172)||(8735963-8736133)
chr2 (1-170)||(41585194-41585364)
chr2 (1-172)||(14306362-14306534)
chr2 (3-170)||(2925032-2925200)
chr2 (1-170)||(17906020-17906191)
chr2 (55-172)||(28021704-28021821)
chr2 (57-173)||(21504886-21505002)
chr2 (62-173)||(32839185-32839296)
chr2 (55-167)||(19193746-19193858)
chr2 (65-144)||(11595249-11595328)
chr2 (65-144)||(11607151-11607230)
chr2 (55-173)||(7167185-7167303)
chr2 (62-168)||(7611421-7611527)
chr2 (95-175)||(19072305-19072385)
chr2 (58-171)||(32839714-32839827)
chr2 (63-170)||(30698723-30698830)
chr2 (55-170)||(44205193-44205306)
chr2 (67-149)||(30265777-30265859)
chr2 (78-172)||(31941413-31941507)
chr2 (93-170)||(31703923-31704000)
chr2 (55-179)||(45094000-45094117)
chr2 (112-173)||(6749566-6749627)
chr2 (57-165)||(29278591-29278697)
chr2 (110-170)||(10480269-10480329)
chr2 (110-174)||(11794045-11794109)
chr2 (93-168)||(2274312-2274386)
chr2 (122-170)||(7684606-7684654)
chr2 (110-166)||(11532118-11532174)
chr2 (122-174)||(31220873-31220922)
chr2 (55-115)||(7227615-7227675)
chr2 (63-171)||(36302410-36302516)
[»] chr4 (41 HSPs)
chr4 (3-173)||(2126218-2126389)
chr4 (55-174)||(35470557-35470676)
chr4 (3-172)||(40547766-40547937)
chr4 (55-173)||(42775777-42775895)
chr4 (3-170)||(41139852-41140020)
chr4 (55-173)||(47108653-47108771)
chr4 (3-172)||(30303500-30303670)
chr4 (3-172)||(21782354-21782523)
chr4 (55-170)||(28751744-28751859)
chr4 (1-168)||(46242169-46242336)
chr4 (10-169)||(27284221-27284381)
chr4 (55-169)||(56118170-56118284)
chr4 (62-173)||(26534928-26535038)
chr4 (55-170)||(46242622-46242737)
chr4 (3-170)||(54566554-54566722)
chr4 (59-169)||(13318216-13318325)
chr4 (3-168)||(31947953-31948119)
chr4 (62-167)||(42776525-42776630)
chr4 (55-170)||(24705763-24705878)
chr4 (55-172)||(16516606-16516718)
chr4 (62-174)||(5579647-5579759)
chr4 (10-166)||(16299781-16299938)
chr4 (64-140)||(17727488-17727564)
chr4 (12-170)||(17727800-17727960)
chr4 (55-172)||(19461264-19461381)
chr4 (110-170)||(10633181-10633241)
chr4 (110-173)||(31473999-31474062)
chr4 (110-170)||(21012439-21012499)
chr4 (55-173)||(5716072-5716190)
chr4 (57-170)||(9449412-9449523)
chr4 (103-173)||(29091606-29091676)
chr4 (122-171)||(41983368-41983417)
chr4 (3-158)||(52294609-52294766)
chr4 (71-137)||(4490469-4490535)
chr4 (122-175)||(3803726-3803779)
chr4 (55-116)||(29685649-29685710)
chr4 (121-172)||(53760322-53760373)
chr4 (66-116)||(31334854-31334904)
chr4 (55-132)||(13088352-13088429)
chr4 (137-170)||(43955048-43955081)
chr4 (103-152)||(56339549-56339598)
[»] chr3 (47 HSPs)
chr3 (1-174)||(53469947-53470121)
chr3 (3-179)||(36397502-36397679)
chr3 (3-170)||(671188-671356)
chr3 (55-170)||(34089010-34089125)
chr3 (55-173)||(48948016-48948134)
chr3 (3-170)||(35279470-35279638)
chr3 (3-170)||(43863486-43863653)
chr3 (3-173)||(24241708-24241879)
chr3 (3-162)||(53129434-53129594)
chr3 (55-168)||(28181800-28181913)
chr3 (62-170)||(7976992-7977100)
chr3 (3-170)||(21731300-21731468)
chr3 (3-166)||(34396148-34396312)
chr3 (55-170)||(52527444-52527559)
chr3 (3-179)||(38506475-38506652)
chr3 (59-167)||(48824637-48824745)
chr3 (55-170)||(21307111-21307226)
chr3 (55-177)||(645728-645850)
chr3 (1-174)||(28092044-28092216)
chr3 (12-173)||(47767816-47767978)
chr3 (55-171)||(50168190-50168306)
chr3 (55-174)||(37054830-37054949)
chr3 (55-170)||(42005473-42005588)
chr3 (62-170)||(2105171-2105279)
chr3 (1-174)||(30766932-30767106)
chr3 (55-171)||(26547412-26547527)
chr3 (55-143)||(13339118-13339206)
chr3 (1-165)||(55460645-55460810)
chr3 (55-170)||(7302827-7302942)
chr3 (55-166)||(13176195-13176306)
chr3 (10-140)||(6836590-6836721)
chr3 (110-172)||(19475966-19476028)
chr3 (3-135)||(46707005-46707139)
chr3 (81-161)||(36636287-36636367)
chr3 (68-172)||(44288022-44288126)
chr3 (110-172)||(8762276-8762338)
chr3 (62-172)||(31188918-31189027)
chr3 (110-170)||(33871764-33871824)
chr3 (110-170)||(47714426-47714486)
chr3 (62-141)||(44329488-44329566)
chr3 (93-151)||(2733026-2733084)
chr3 (63-167)||(47000170-47000270)
chr3 (62-173)||(47283791-47283908)
chr3 (62-115)||(15760161-15760214)
chr3 (77-148)||(46636305-46636376)
chr3 (55-144)||(45867192-45867281)
chr3 (122-179)||(54761417-54761474)
[»] chr1 (40 HSPs)
chr1 (1-170)||(946760-946929)
chr1 (3-179)||(15467477-15467654)
chr1 (3-170)||(28632126-28632294)
chr1 (55-173)||(21267343-21267461)
chr1 (3-157)||(32647673-32647829)
chr1 (3-165)||(41822078-41822241)
chr1 (11-173)||(6470225-6470389)
chr1 (55-173)||(35499483-35499601)
chr1 (55-157)||(50472150-50472252)
chr1 (57-170)||(31166647-31166761)
chr1 (3-168)||(44571572-44571738)
chr1 (62-170)||(37036504-37036612)
chr1 (1-173)||(48953925-48954097)
chr1 (55-170)||(37446883-37446998)
chr1 (62-176)||(39887507-39887621)
chr1 (95-172)||(220627-220704)
chr1 (69-173)||(32128532-32128636)
chr1 (55-170)||(37447426-37447541)
chr1 (62-172)||(8225214-8225324)
chr1 (1-167)||(44571057-44571224)
chr1 (55-168)||(23955981-23956094)
chr1 (58-126)||(41577841-41577909)
chr1 (62-173)||(10166936-10167047)
chr1 (110-170)||(47541851-47541911)
chr1 (59-172)||(41480952-41481065)
chr1 (103-170)||(37447971-37448038)
chr1 (112-170)||(12293022-12293080)
chr1 (122-172)||(31196903-31196953)
chr1 (83-172)||(4663773-4663861)
chr1 (112-173)||(24273081-24273142)
chr1 (81-166)||(32202212-32202297)
chr1 (93-170)||(41822752-41822829)
chr1 (63-131)||(31195955-31196023)
chr1 (55-162)||(52134877-52134983)
chr1 (109-165)||(13182107-13182163)
chr1 (64-132)||(14406086-14406154)
chr1 (110-165)||(26500947-26501002)
chr1 (122-173)||(47165072-47165123)
chr1 (135-172)||(32288012-32288049)
chr1 (122-170)||(23969439-23969487)
[»] chr7 (41 HSPs)
chr7 (3-172)||(28538675-28538845)
chr7 (3-170)||(2411693-2411861)
chr7 (3-170)||(14602771-14602939)
chr7 (3-172)||(35456186-35456356)
chr7 (3-172)||(42816904-42817074)
chr7 (55-170)||(39342160-39342275)
chr7 (3-170)||(40496100-40496268)
chr7 (55-172)||(23548117-23548234)
chr7 (55-172)||(36328326-36328443)
chr7 (3-166)||(30080312-30080476)
chr7 (55-172)||(45984768-45984885)
chr7 (55-172)||(45989128-45989245)
chr7 (55-172)||(43791456-43791573)
chr7 (3-168)||(9784455-9784622)
chr7 (55-172)||(26416355-26416471)
chr7 (1-174)||(37460466-37460640)
chr7 (3-163)||(30629440-30629602)
chr7 (55-172)||(41442601-41442718)
chr7 (20-164)||(30587436-30587578)
chr7 (55-170)||(40495634-40495749)
chr7 (63-174)||(45181753-45181863)
chr7 (55-168)||(13814504-13814617)
chr7 (20-115)||(40667737-40667831)
chr7 (62-173)||(32650964-32651076)
chr7 (107-174)||(14790554-14790621)
chr7 (55-170)||(46699747-46699862)
chr7 (93-168)||(38320751-38320825)
chr7 (112-173)||(26161984-26162045)
chr7 (3-115)||(19865612-19865725)
chr7 (1-170)||(25188794-25188962)
chr7 (96-172)||(35488688-35488763)
chr7 (55-173)||(764882-765001)
chr7 (62-173)||(3905247-3905348)
chr7 (134-173)||(40667834-40667873)
chr7 (55-140)||(18926202-18926287)
chr7 (55-119)||(46700599-46700663)
chr7 (110-173)||(6498611-6498674)
chr7 (128-170)||(29639063-29639105)
chr7 (93-150)||(45967521-45967578)
chr7 (113-172)||(1580381-1580441)
chr7 (62-166)||(15991331-15991434)
[»] scaffold0301 (1 HSPs)
scaffold0301 (3-157)||(7533-7688)
[»] chr5 (41 HSPs)
chr5 (3-170)||(41761744-41761913)
chr5 (3-170)||(927682-927850)
chr5 (4-173)||(12480282-12480452)
chr5 (1-174)||(17541880-17542054)
chr5 (55-170)||(32249649-32249764)
chr5 (83-174)||(22304645-22304736)
chr5 (5-170)||(1209049-1209213)
chr5 (62-170)||(28490347-28490456)
chr5 (62-170)||(22304734-22304842)
chr5 (55-169)||(37091021-37091135)
chr5 (62-171)||(6771822-6771931)
chr5 (1-168)||(14835170-14835338)
chr5 (1-168)||(28489841-28490009)
chr5 (20-172)||(33146480-33146632)
chr5 (3-179)||(33995435-33995612)
chr5 (3-166)||(15270421-15270584)
chr5 (55-172)||(15579996-15580115)
chr5 (55-173)||(22303385-22303503)
chr5 (55-168)||(10315083-10315196)
chr5 (55-166)||(37241163-37241274)
chr5 (1-171)||(13390961-13391119)
chr5 (55-171)||(8264880-8264996)
chr5 (112-173)||(35111702-35111763)
chr5 (98-170)||(8255434-8255506)
chr5 (112-170)||(25935151-25935209)
chr5 (97-162)||(38178813-38178878)
chr5 (97-162)||(38206037-38206102)
chr5 (110-170)||(12064318-12064378)
chr5 (110-173)||(20320526-20320589)
chr5 (55-142)||(30519389-30519475)
chr5 (55-142)||(30559729-30559815)
chr5 (107-170)||(40089412-40089475)
chr5 (3-116)||(9893749-9893866)
chr5 (110-168)||(19533769-19533827)
chr5 (83-164)||(31316585-31316666)
chr5 (83-164)||(31368314-31368395)
chr5 (77-170)||(32317130-32317222)
chr5 (3-168)||(17492691-17492857)
chr5 (121-172)||(6955020-6955071)
chr5 (110-173)||(37722751-37722814)
chr5 (57-157)||(18442938-18443038)
[»] chr6 (17 HSPs)
chr6 (3-170)||(8475510-8475678)
chr6 (1-172)||(1368853-1369027)
chr6 (55-170)||(15615920-15616035)
chr6 (63-171)||(10105448-10105556)
chr6 (63-170)||(6357825-6357932)
chr6 (55-170)||(28918591-28918706)
chr6 (1-173)||(31413239-31413412)
chr6 (83-170)||(1195766-1195853)
chr6 (81-170)||(724811-724900)
chr6 (110-176)||(34244837-34244903)
chr6 (84-168)||(15833070-15833154)
chr6 (110-172)||(13487425-13487487)
chr6 (122-170)||(9697889-9697937)
chr6 (110-170)||(34364894-34364954)
chr6 (66-168)||(26855480-26855578)
chr6 (62-166)||(26901343-26901447)
chr6 (112-172)||(29889294-29889355)
[»] scaffold0318 (1 HSPs)
scaffold0318 (10-171)||(3245-3407)
[»] scaffold0169 (1 HSPs)
scaffold0169 (20-170)||(4418-4568)
[»] scaffold0129 (1 HSPs)
scaffold0129 (3-144)||(19333-19475)
[»] scaffold0417 (1 HSPs)
scaffold0417 (55-167)||(11499-11611)
[»] scaffold0047 (1 HSPs)
scaffold0047 (62-168)||(49838-49944)
[»] scaffold0337 (2 HSPs)
scaffold0337 (55-156)||(15500-15601)
scaffold0337 (63-148)||(15959-16044)
[»] scaffold0065 (2 HSPs)
scaffold0065 (55-156)||(2542-2643)
scaffold0065 (93-148)||(3001-3056)
[»] scaffold0400 (1 HSPs)
scaffold0400 (4-172)||(4018-4187)
[»] scaffold0365 (1 HSPs)
scaffold0365 (4-172)||(4662-4831)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-166)||(130682-130793)
[»] scaffold0014 (1 HSPs)
scaffold0014 (10-78)||(223398-223466)
[»] scaffold0027 (1 HSPs)
scaffold0027 (110-169)||(11319-11378)


Alignment Details
Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 44346389 - 44346217
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  44346389 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 44346290  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44346289 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 44346217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 43185361 - 43185535
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43185361 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttctttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 43185460  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 176  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43185461 gaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaagaat 43185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 29257073 - 29256911
Alignment:
Q  11 aaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatt 109  Q
    |||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29257073 aaaatttataaaagttgcccaaaaatgatgacaatgaatatttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 29256974  T
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29256973 taaattgcctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactctta 29256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 14627 - 14787
Alignment:
Q  10 taaaatttataaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatt 109  Q
    |||||||||| ||||| ||||||||||||||  |||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14627 taaaatttatcaagttgcccaaaaatgatgataatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatt 14726  T
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14727 taaattgcctagaattctaaattctttaaaatttctcaatttcctcatccaaacacactct 14787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 31980210 - 31980047
Alignment:
Q  10 taaaatttataaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaat----ttagaaatgaaagtaatttaattgaat 105  Q
    |||||||||||||||| ||||||||||||||| |||||       ||||||||||||||||||||||||    | |||||||||||||||||||||||||    
T  31980210 taaaatttataaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaatgaattgagaaatgaaagtaatttaattgaat 31980111  T
Q  106 catttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31980110 catttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 40733803 - 40733641
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  40733803 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 40733704  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaaca 164  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  40733703 gaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 29482510 - 29482339
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||| |||||       |||| |||||||||||||||||||| |||||||||||||||||||    
T  29482510 ccaaaaaattaaaatttataaaagttgcccaaaaat-atgacaatgaattttttaattagttcatccaaacaaaagaattgagaaatgaaagtaatttaa 29482412  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29482411 ttgaatcatttaaatttcctataattctaaattctttaaaatttctcaattacctcatccaaacacactctta 29482339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 31976829 - 31976666
Alignment:
Q  10 taaaatttataaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaat----ttagaaatgaaagtaatttaattgaat 105  Q
    |||||||||||||||| | ||||||||||||| |||||       ||||||||||||||||||||||||    | |||||||||||||||||||||||||    
T  31976829 taaaatttataaagttgctcaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaatgaattgagaaatgaaagtaatttaattgaat 31976730  T
Q  106 catttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactc 169  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31976729 catttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 33376999 - 33376829
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn--attacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||         |||| |||||||||||||||||||| |||||||||||||||||||    
T  33376999 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttttattatttcatccaaacaaaagaattgagaaatgaaagtaatttaa 33376900  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33376899 ttgaatcatttaaattacctagaattctaaattctttaaaatttatcaattacctcatccaaacacactct 33376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 29611705 - 29611875
Alignment:
Q  1 ccaaaaaactaaaatttat-aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| |||||||||| |||||| ||||||||||||||| |||||       ||||||||||||||||||||   || |||||||||||||||||||    
T  29611705 ccaaaaaattaaaatttatgaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaa---ttgagaaatgaaagtaatttaa 29611801  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||||||||||||||||||||  ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  29611802 ttgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccacatccaaacacactcttag 29611875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 33986431 - 33986546
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  33986431 attactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattccgaattctttaaaatttctcaattacct 33986530  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  33986531 catccaaacacactct 33986546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 1087961 - 1087846
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  1087961 attactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctaaaattctaaattctttaaaatttctcaattacct 1087862  T
Q  155 catccaaacacactct 170  Q
    ||| |||||| |||||    
T  1087861 cattcaaacatactct 1087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 10593507 - 10593620
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  10593507 attactccatccaaacaaaagtattaaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaatt-tttaaaatttctcaattacct 10593605  T
Q  155 catccaaacacactc 169  Q
    |||||||||||||||    
T  10593606 catccaaacacactc 10593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 35978707 - 35978590
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| || ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||    
T  35978707 attactccacccaaacaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgactagaattttaaattctttaaaatttctcaattgcct 35978608  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  35978607 catccaaacacactctta 35978590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 26520097 - 26519984
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |    
T  26520097 attactccatccaaacaaaagtattgagaaatgaaagtagtttaattgaatcatttaaattgcctagaattttaaattctttaaaatttatcaattactt 26519998  T
Q  155 catccaaacacact 168  Q
     |||||||||||||    
T  26519997 tatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 34009088 - 34009240
Alignment:
Q  20 aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcct 119  Q
    |||||| ||||||||||||| | |||||       ||| || |||||||||||||  ||| |||||||||||||| |||||||||| |||||||||||||    
T  34009088 aaagttgcccaaaaatgatggcaatgaaattctttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaattgcct 34009187  T
Q  120 tgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
       |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34009188 aagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 34009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 24051706 - 24051825
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  ||||| ||||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  24051706 attactccatccaaacaataatatttaaaaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 24051805  T
Q  155 catccaaacacactcttaga 174  Q
    ||||||||||||||||||||    
T  24051806 catccaaacacactcttaga 24051825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 9983036 - 9983201
Alignment:
Q  10 taaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcat 108  Q
    ||||||||||||| ||| ||||||||||||||| |||||       |||  | |||||||||||    ||||| ||||||||  |||| |||||||||||    
T  9983036 taaaatttataaaagttgcccaaaaatgatgacaatgaaattttttatttttccatccaaacaaggatatttaaaaatgaaatcaattcaattgaatcat 9983135  T
Q  109 ttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    || |||||  | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9983136 ttgaattgattagaattctaaattcttcaaaatttctcaattacctcatccaaacacactcttaga 9983201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 13145018 - 13145131
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| || ||||||||||  ||| |||||| |||| ||||||||| ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||    
T  13145018 attactccacccaaacaaaaatattgagaaataaaaggaatttaattaaatcatttaaattgcctagaattttaaattctttaaattttcccaattacct 13145117  T
Q  155 catccaaacacact 168  Q
    || |||||||||||    
T  13145118 cacccaaacacact 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 24045398 - 24045511
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  24045398 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 24045497  T
Q  155 catccaaacacact 168  Q
    ||||||||||||||    
T  24045498 catccaaacacact 24045511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 44890034 - 44890150
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctca 156  Q
    |||| ||||||||||| |  |||||  |||||||| ||||||||| ||| |||| |||| ||| |||||||||||| || |||||||||||||||||| |    
T  44890034 tactccatccaaacaataatatttaagaatgaaagcaatttaatttaataatttgaattacctagaattctaaatttttcaaaatttctcaattacctta 44890133  T
Q  157 tccaaacacactcttag 173  Q
    |||||||||||||||||    
T  44890134 tccaaacacactcttag 44890150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 36624925 - 36624810
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||  |||||||| |||| ||||||||||||| |||| | | ||||||||||||||| ||||||||||||||| |     
T  36624925 attacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccttagaattctaaattcttcaaaatttctcaattatcc 36624826  T
Q  155 catccaaacacactct 170  Q
    |||| |||||||||||    
T  36624825 catctaaacacactct 36624810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 31976224 - 31976122
Alignment:
Q  64 tccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaac 163  Q
    |||||||||||| ||| |||||| |||| |||||||||||||||||| |||| ||| ||||||||||||||| |   ||| |||||||||||||||||||    
T  31976224 tccaaacaaaagtattgagaaataaaagcaatttaattgaatcatttgaattacctagaattctaaattcttaattttttttcaattacctcatccaaac 31976125  T
Q  164 aca 166  Q
    |||    
T  31976124 aca 31976122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 28324338 - 28324221
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||| || |  |||||  |||||||  |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  28324338 attactccatccaaaaaataatatttaagaatgaaaacaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 28324239  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  28324238 catccaaacacactctta 28324221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 43168098 - 43168214
Alignment:
Q  60 ttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatcc 159  Q
    |||||| ||||||||| ||| |||||||||| |||||||||| ||| |||||||||| || ||||||||||||||||||||    ||||||  |||||||    
T  43168098 ttcatcaaaacaaaagtattaagaaatgaaaataatttaattaaattatttaaattgtctagaattctaaattctttaaaaaaattcaattgactcatcc 43168197  T
Q  160 aaacacactcttagaat 176  Q
    ||||||| ||| |||||    
T  43168198 aaacacattctaagaat 43168214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 28190342 - 28190231
Alignment:
Q  59 cttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    ||||||||||||||||  ||| |||||| | |||||||||||||||||||||||||||| | ||||||||| |||||| ||||||   ||||| |||||     
T  28190342 cttcatccaaacaaaaatattgagaaataagagtaatttaattgaatcatttaaattgcgtagaattctaagttctttcaaattttcgaattatctcatt 28190243  T
Q  159 caaacacactct 170  Q
    |||| |||||||    
T  28190242 caaatacactct 28190231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 8049611 - 8049724
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||| |||||||||||| ||  | ||||||||  | |||||||||||||||| |||| | | ||| ||||||||||||||||  | ||||||||||    
T  8049611 attacttcgtccaaacaaaagtatagataaatgaaaacattttaattgaatcatttgaattacatagaactctaaattctttaaaaaatttcaattacct 8049710  T
Q  155 catccaaacacact 168  Q
    ||||||||||||||    
T  8049711 catccaaacacact 8049724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 36103250 - 36103308
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  36103250 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 30444866 - 30444806
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  30444866 taaattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactct 30444806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 34390392 - 34390489
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatca-tttaaattgccttgaattctaaattctttaaaatttctcaattacctcatcca 160  Q
    |||| ||||||||| ||| |||||| |||||||||||||||||||| |||||||| ||| |||||||          |||||||||||||||||||||||    
T  34390392 catcaaaacaaaagtattgagaaataaaagtaatttaattgaatcattttaaatttcctagaattct----------aaatttctcaattacctcatcca 34390481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 10605977 - 10606068
Alignment:
Q  77 atttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||| |||| || |||||||||||||||||||| ||||| ||  |||||||||||||| ||||    | ||||||||||||||||||||||    
T  10605977 atttaaaaattaaggtaatttaattgaatcatttgaattgactaaaattctaaattcttcaaaaaaaattaattacctcatccaaacacact 10606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 23011885 - 23011944
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatcc-aaacacactct 170  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23011885 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaaacacactct 23011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 7669139 - 7669185
Alignment:
Q  124 ttctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7669139 ttctaaattctttgaaatttctcaattaccccatccaaacacactct 7669185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 7079680 - 7079825
Alignment:
Q  4 aaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    ||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||  ||||||||||||| ||| ||||||||||| | || ||||     
T  7079680 aaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattactctatccaaacaaaagtattgagaaatgaaagcatttcaattt 7079779  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcat 157  Q
    ||| |         ||| ||||| |||||||||||||||||||||||||||||||    
T  7079780 aatta---------cctagaattttaaattctttaaaatttctcaattacctcat 7079825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 8469885 - 8469933
Alignment:
Q  107 atttaaattgccttgaattctaaattctttaaaatttctcaattacctc 155  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  8469885 atttgaattacctagaattctaaattctttaaaatttctcaattacctc 8469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 14013375 - 14013269
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    |||||||||| |  ||||||||||||| | |||||||| ||||| |||| ||||||| ||||||||||||| | |||||||   ||||| ||| ||||||    
T  14013375 atccaaacaataagatttagaaatgaaggcaatttaat-gaatcttttatattgcctagaattctaaattcatcaaaattttctaattaactcgtccaaa 14013277  T
Q  163 cacactct 170  Q
     |||||||    
T  14013276 tacactct 14013269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 26251932 - 26251865
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaa 130  Q
    ||||||||||||  ||||||||||||||  |||| ||| ||||||||| |||||||| ||||||||||    
T  26251932 atccaaacaaaaacatttagaaatgaaataaattcaatcgaatcatttgaattgcctcgaattctaaa 26251865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 15718590 - 15718640
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaat 105  Q
    |||||| |||||||||||||| ||| |||||||||||||||| ||||||||    
T  15718590 attactccatccaaacaaaagtattgagaaatgaaagtaattaaattgaat 15718640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 6460587 - 6460490
Alignment:
Q  79 ttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 176  Q
    ||||||||||| |  |||| |||||||||||| |||| |||  |||| |||||||| | |||||| | ||||  |||||| |||||||||||||||||    
T  6460587 ttagaaatgaaggatatttgattgaatcatttgaatttcctaaaattttaaattctattaaattttttaattgtctcatcaaaacacactcttagaat 6460490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 26520565 - 26520509
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactc 169  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  26520565 aattccctagaattctaaat-cttcaaaatttctcaattaccccatccaaacacactc 26520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 8409313 - 8409253
Alignment:
Q  81 agaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaat 141  Q
    |||||| |||| ||||||||| ||||||||| |||| || ||||||||| |||||||||||    
T  8409313 agaaataaaagcaatttaattaaatcatttagattgtctagaattctaatttctttaaaat 8409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 13823458 - 13823497
Alignment:
Q  131 ttctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  13823458 ttcttcaaaatttctcaattacttcatccaaacacactct 13823497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 15719406 - 15719476
Alignment:
Q  98 aattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||||  ||| ||||||||  |||| |||||| |||||||||||||||||||||  | ||||||||||    
T  15719406 aattgaatagtttgaattgcctaaaattttaaattttttaaaatttctcaattaccttgttcaaacacact 15719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 6421788 - 6421829
Alignment:
Q  129 aattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| ||||||||||| ||||| |||||    
T  6421788 aattctttaaaatttctcgattacctcatctaaacaaactct 6421829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 3 - 190
Target Start/End: Complemental strand, 1583500 - 1583312
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| ||||||||||||||||||||     
T  1583500 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatg 1583401  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatattcaatgtaattg 190  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| ||||||||    
T  1583400 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaagagaattcagtgtaattg 1583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 44256015 - 44256183
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  44256015 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 44256114  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44256115 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacatactct 44256183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 7309604 - 7309436
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| | ||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7309604 aaaaaattaaaatttataaaagttgcacaaaaatgatgacaatgaatatttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 7309505  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7309504 gaatcatttaaattgcttagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 769412 - 769581
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||        ||||||||||||||||||||||||| | ||||||||||||||||||    
T  769412 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaat 769511  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  769512 tgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 769581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 33188958 - 33188789
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||        ||||||||||||||||||||||||| | ||||||||||||||||||    
T  33188958 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaat 33188859  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33188858 tgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 33188789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 35047369 - 35047198
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  | |||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35047369 aaaaaattaaaatttataaaagttggcaaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 35047270  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  35047269 gaatcatttaaattgcctagaattttaaattctttaaaatttctcaattaccccatccaaacacactcttag 35047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 39630607 - 39630775
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  39630607 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaataaaagaattgagaaatgaaagtaatttaatt 39630706  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  39630707 gaatcatttaaattgcctagaattttaaattttttaaaatttctcaattacctcatccaaacacactct 39630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 11141686 - 11141852
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||| |||||||||     
T  11141686 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattaagaaatgaaattaatttaatg 11141785  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  11141786 gaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 13018127 - 13018297
Alignment:
Q  4 aaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    ||||| ||||| ||||||| ||| ||||||||||||||| |||||       |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13018127 aaaaattaaaacttataaaagttgcccaaaaatgatgacaatgaatttttttattactccatccaaacaaaagaattgagaaatgaaagtaatttaattg 13018226  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||| ||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  13018227 aattatttaaattacctagaattttaaattctttataatttctcaattacctcatccaaacacactcttag 13018297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 3092680 - 3092795
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  3092680 attactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacct 3092779  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  3092780 catccaaacacactct 3092795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 19231127 - 19231017
Alignment:
Q  59 cttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  19231127 cttcatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattct-aattctttaaaatttctcaattacctcatc 19231029  T
Q  159 caaacacactct 170  Q
    ||||||||||||    
T  19231028 caaacacactct 19231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 8736133 - 8735963
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||| | |||||       ||| || |||||||||||||  ||| |||||||||||||||||||||    
T  8736133 aaaaaattaaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaaacaaaaatattgagaaatgaaagtaatttaatt 8736034  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8736033 gaatcatttaaattgcttaggattctaaattctttaaaatttcccaattacctcatccaaacacactctta 8735963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 41585364 - 41585194
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||| || || |||||       |||||||||||||||||||| |||| |||||||||||||||||||    
T  41585364 ccaaaaaattaaaatttataaaagttgcccaaaaattataacaatgaatttttttattacttcatccaaacaaaataattgagaaatgaaagtaatttaa 41585265  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
     |||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  41585264 atgaatcatttaaattgtcaagaattctaaattctttaaaatttatcaattacctcatccaaagacactct 41585194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 14306534 - 14306362
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| |||  ||||||||||||||  ||||       |||||| |||||||||||||| ||| ||||||||||| | |||||    
T  14306534 ccaaaaaattaaaatttataaaagttgtccaaaaatgatgacagtgaaattttttattactccatccaaacaaaagtattgagaaatgaaagcattttaa 14306435  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14306434 ttgaaccattttaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 14306362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 2925032 - 2925200
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       |||||| |||| ||||||||| ||| ||||||||||  | ||||| |    
T  2925032 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaatttttgattactccatcaaaacaaaagtattgagaaatgaaaacattttaaat 2925131  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2925132 gaatcatttaaattgcctagaattctaaattctttaaaatttcccaattacttcatccaaacacactct 2925200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17906020 - 17906191
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaattta 98  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||| |||||        |||||| |||| ||||||||||||| ||||||||||||||||||    
T  17906020 ccaaaaaaataaaacttataaaagttgcccaaaaatgatgacaatgaattttttttattactccatctaaacaaaagaattgagaaatgaaagtaattta 17906119  T
Q  99 attgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||| |||||||||  ||  |||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906120 attgaattatttaaattatctataattttaaattctttataatttttcaattacctcatccaaacacactct 17906191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 28021821 - 28021704
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| |||||| |||| | |||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||| ||    
T  28021821 attactacatccaaacaaaagtattgagaaataaaagcattttaattgaatcatttgaattgtcaagaattctaaattctttaaaatttctcaattagct 28021722  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  28021721 catccaaacacactctta 28021704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 21504886 - 21505002
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctca 156  Q
    |||| |||||||||||||  ||| ||||||| ||||||||||||| || |||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  21504886 tactccatccaaacaaaattattgagaaatgcaagtaatttaattaaaacatttaaattgcttagaattctaaattctttaaaatttcccaattacctca 21504985  T
Q  157 tccaaacacactcttag 173  Q
    |||||||||||| ||||    
T  21504986 tccaaacacacttttag 21505002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 32839296 - 32839185
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||  |||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||    
T  32839296 catccaaacaataatatttatgaatgaaagcaatttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaattacctcatctaa 32839197  T
Q  162 acacactcttag 173  Q
    ||||||||||||    
T  32839196 acacactcttag 32839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 19193858 - 19193746
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||  || ||||||||||||||  |||| ||| || ||||||||||  |||||||||    
T  19193858 attactccatccaaacaaaagtattgagaaatgaaagtaatttaatcaaaacatttaaattgcctaaaattttaatttttttaaaattttccaattacct 19193759  T
Q  155 catccaaacacac 167  Q
    |||||||||||||    
T  19193758 catccaaacacac 19193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 11595249 - 11595328
Alignment:
Q  65 ccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttc 144  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  11595249 ccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 11607151 - 11607230
Alignment:
Q  65 ccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttc 144  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  11607151 ccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 7167303 - 7167185
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  7167303 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 7167204  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||||||| ||||    
T  7167203 catccaaacacacttttag 7167185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 7611527 - 7611421
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||| |||||||| |||||||||||||||||| |||| ||| ||||| ||||||||| ||||||||||||||||  |||||||    
T  7611527 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaattactccatccaa 7611428  T
Q  162 acacact 168  Q
    |||||||    
T  7611427 acacact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 19072305 - 19072385
Alignment:
Q  95 tttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 175  Q
    |||| |||||||||||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19072305 tttacttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattatctcatccaaacacactctaagaa 19072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 32839827 - 32839714
Alignment:
Q  58 acttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcat 157  Q
    ||||||||||||||| |  |||||  ||| |||| |||| ||||||||||||| ||||  || ||||||||||||||| ||||||||||||||||| ||     
T  32839827 acttcatccaaacaataacatttaagaattaaagcaattgaattgaatcatttgaattctctagaattctaaattcttcaaaatttctcaattaccccac 32839728  T
Q  158 ccaaacacactctt 171  Q
    ||||||| ||||||    
T  32839727 ccaaacaaactctt 32839714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 30698723 - 30698830
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    |||||||||| |  |||||  |||||||| ||||||||| |||||||| |||| |||  |||||||||||||| |||||||||||| |||  ||||||||    
T  30698723 atccaaacaataatatttaagaatgaaagcaatttaattaaatcatttgaattacctaaaattctaaattcttcaaaatttctcaaatactccatccaaa 30698822  T
Q  163 cacactct 170  Q
    ||||||||    
T  30698823 cacactct 30698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 44205306 - 44205193
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||| ||||| ||| |||| ||||| |||| |||| | ||||||||| ||| || ||||||||||||||| |||| ||||||||||  |    
T  44205306 attacttcatccaaa-aaaagtattgagaa-tgaaaataatctaatcgtatcatttaagttgtctagaattctaaattcttaaaaaattctcaattatat 44205209  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  44205208 catccaaacacactct 44205193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 30265777 - 30265859
Alignment:
Q  67 aaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaat 149  Q
    ||||||||  |||||||||||||   ||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||    
T  30265777 aaacaaaaatatttagaaatgaagacaatttaatttaatcatttgaattgcttagaattctaaattctttaaaatttctcaat 30265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 31941413 - 31941507
Alignment:
Q  78 tttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||| || | ||||||||||||| |||| ||||| ||  |||||||||||||| ||||||| ||||||||||| || |||||||||||||    
T  31941413 tttagaaataaatgcaatttaattgaataatttgaattgtctataattctaaattcttgaaaatttatcaattacctcgtcaaaacacactctta 31941507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 31704000 - 31703923
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| ||||| || |||||||||||| | ||||||||  |||||||||||| ||||||||||||    
T  31704000 aatttaattgaatcatttgaattgactagaattctaaattatctaaaattttccaattacctcattcaaacacactct 31703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 45094117 - 45094000
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||| ||||||||  ||| ||||||||||||| |||| ||| |       ||||||| ||||||||| |||||||     
T  45094117 attacttcatccaaacaataatatttaggaatgaaagcgattgaattgaatcatttgaattacctag-------aattcttcaaaatttcttaattaccc 45094025  T
Q  155 catccaaacacactcttagaatatt 179  Q
    ||| |||||||||||||||| ||||    
T  45094024 cattcaaacacactcttagagtatt 45094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 6749566 - 6749627
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  6749566 aattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacaagctcttag 6749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 29278697 - 29278591
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctca 156  Q
    |||| |||||||||||||  ||||||||  ||||| ||||||||||| |||||| ||||| || ||||||||||||||| | ||    ||||||| ||||    
T  29278697 tactccatccaaacaaaaatatttagaa--gaaagcaatttaattgattcattttaattgtctagaattctaaattcttcacaaaaaatcaattatctca 29278600  T
Q  157 tccaaacac 165  Q
    |||||||||    
T  29278599 tccaaacac 29278591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10480269 - 10480329
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||| ||||||||    
T  10480269 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaagcacactct 10480329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 11794045 - 11794109
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||| || ||||| |||||||||||||||||   |||||||| |||||||||||||||||||    
T  11794045 taaattgtctagaattttaaattctttaaaattttcaaattacctaatccaaacacactcttaga 11794109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 2274386 - 2274312
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||||||||||||||||| ||  |||| |||||| ||||||||||| |||||||||  |||||| |||||    
T  2274386 aatttaattgaatcatttaaattgtctaaaattataaattatttaaaatttc-caattacctagtccaaatacact 2274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 7684606 - 7684654
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  7684606 aattttaaattctttaaaatttttaaattaccttatccaaacacactct 7684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 11532174 - 11532118
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    |||||||||| ||||| |||||||||||||| |||  ||||| ||||||||||||||    
T  11532174 taaattgcctagaattttaaattctttaaaacttccaaattatctcatccaaacaca 11532118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 31220873 - 31220922
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  31220873 aattctaaattctctaaaatttc-caatta--tcatccaaacacactcttaga 31220922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 7227675 - 7227615
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaatt 115  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||||| ||||    
T  7227675 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaatt 7227615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 36302516 - 36302410
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||  ||||||||||||| ||| |  |||||||| |||| |||| | |  ||||  ||||||| |||||||| |||||||||||||||| |    
T  36302516 atccaaacaaaaacatttagaaatgaatgtactc-aattgaattatttgaattccttaaaatttcaaattctctaaaattt-tcaattacctcatccata 36302419  T
Q  163 cacactctt 171  Q
    || ||||||    
T  36302418 catactctt 36302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 2126218 - 2126389
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2126218 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 2126317  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2126318 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttag 2126389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 35470557 - 35470676
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  35470557 attacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacat 35470656  T
Q  155 catccaaacacactcttaga 174  Q
    ||||||||||||||||||||    
T  35470657 catccaaacacactcttaga 35470676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 40547937 - 40547766
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| || |||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40547937 aaaaaattaaaatttataaaagttgccaaaaaatgatgacgatgagttttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaat 40547838  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40547837 tgaatcatttaaattgcctagaattttaaattctttaaaatttctcaattacctcatccaaacacactctta 40547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 42775895 - 42775777
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  42775895 attactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacct 42775796  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||||||||||||    
T  42775795 catccaaacacactcttag 42775777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 41139852 - 41140020
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||| | ||||||||||||||| ||| |||||||||| ||||||||||    
T  41139852 aaaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaaattttgtattccctcatccaaacaaaagtattgagaaatgaaaataatttaatt 41139951  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  41139952 gaatcatttaaattgcttagaattttaaattctttaaaatttctcaattacttcttccaaacacactct 41140020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 47108653 - 47108771
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  47108653 attactccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacct 47108752  T
Q  155 catccaaacacactcttag 173  Q
    ||||||||||||| |||||    
T  47108753 catccaaacacacacttag 47108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 30303500 - 30303670
Alignment:
Q  3 aaaaaactaaaatttataaagtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||||||  |||||||||||||  |||||        |||||| |||||||||||||  ||||||||||||| ||| |||||||    
T  30303500 aaaaaattaaaatttataaagttgtccaaaaatgatgagaatgaattttttttattactccatccaaacaaaaatatttagaaatgaaggtagtttaatt 30303599  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30303600 gaatcatttgaattgcctagaattttaaattctttaaaatttctcaattatctcatccaaacacactctta 30303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 21782354 - 21782523
Alignment:
Q  3 aaaaaactaaaatttataaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    |||||| | |||||||||||  || |||||||| ||||| |||||       |||||| |||||||||||||| ||| ||||||||||||| |||||| |    
T  21782354 aaaaaatttaaatttataaaagttgccaaaaattatgacaatgaaattttttattactacatccaaacaaaagtattaagaaatgaaagtattttaatgg 21782453  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21782454 aatcatttgaattgtctagaattctaaattctttaaaatttcacaattacctcatccaaacacactctta 21782523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 28751859 - 28751744
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||    
T  28751859 attacttcatccaaacacaaaaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctataattctaaattttttaaaatttctcaattatct 28751760  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  28751759 catccaaacacactct 28751744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 46242336 - 46242169
Alignment:
Q  1 ccaaaaaactaaaatttata-aagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||       ||||||||||||||||||||| ||| |||| |||||| |||||||    
T  46242336 ccaaaaaactaaaatttatacaagttgcccaaaaatgacgacgatgaatttttttattacttcatccaaacaaaagtattgagaagtgaaagcaatttaa 46242237  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||||||||||||  || ||||||||||||||| |||||| || |||||| |||||||||||||||    
T  46242236 ttgaatcatttaaattatctagaattctaaattcttcaaaattcct-aattacttcatccaaacacact 46242169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 27284381 - 27284221
Alignment:
Q  10 taaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcat 108  Q
    ||||||||||||| |||  | |||||||||||| |||||       |||||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  27284381 taaaatttataaaagttgtcgaaaaatgatgacaatgaatttttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaaccat 27284282  T
Q  109 ttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactc 169  Q
    ||||||||||| |||||||||||||||||||||||   |||||  ||||||||||||||||    
T  27284281 ttaaattgcctagaattctaaattctttaaaattttcaaattatatcatccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 56118284 - 56118170
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| | |||| |||||||| ||||||||||    
T  56118284 attactccatccaaacaaaagaattgagaaataaaagtaatttaattaaatcatttaaattgcctagaattctgagttctctaaaatttgtcaattacct 56118185  T
Q  155 catccaaacacactc 169  Q
    |||||||||||||||    
T  56118184 catccaaacacactc 56118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 26534928 - 26535038
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||    
T  26534928 catccaaacaaaagtattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaactacat-atccaa 26535026  T
Q  162 acacactcttag 173  Q
    ||||| ||||||    
T  26535027 acacattcttag 26535038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 46242737 - 46242622
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||  ||| | ||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  46242737 attactccatccaaacaaaaatattgaaaaatgaaagtaatttaattcaatcatttaaattgcttagaattataaattctttaaaatttcccaattacct 46242638  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  46242637 catccaaacacactct 46242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 54566554 - 54566722
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| || |        |||||||||||||||||| |  |||||  |||||||| |||| ||||    
T  54566554 aaaaaaataaaatttataaaagttgcccaaaaatgatgacaataattttttttattacttcatccaaacaataacatttaagaatgaaagcaattgaatt 54566653  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  54566654 gaatcatttgaattcccttgaattttaaattcattaaaatttctcaattaccccatccaaacacactct 54566722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 13318325 - 13318216
Alignment:
Q  59 cttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||||||||| ||| |||||    
T  13318325 cttcaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaatt-ccataaaatctaaattctttaaaatttctcaaatacatcatc 13318227  T
Q  159 caaacacactc 169  Q
    |||||||||||    
T  13318226 caaacacactc 13318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 31947953 - 31948119
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||||||||||||||||| |  ||||       |||||| || ||||||||||| ||| ||||||||| | |||||||||    
T  31947953 aaaaaattaaaatttataaaagtttcccaaaaatgatgccattgaaattttttattactccacccaaacaaaagtattgagaaatgaatggaatttaatt 31948052  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||||||||||||||  |||| |||||||||||||| ||  |||||||||| ||||||| ||||    
T  31948053 gaatcatttaaattgcctaaaattttaaattctttaaaagtttccaattacctcgtccaaacgcact 31948119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 42776525 - 42776630
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||  ||| | |||||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||  ||||||||||||||||    
T  42776525 catccaaacaaaaatattgaaaaatgaaagtaattgaattgaatcatttaaattgcttaggattctaaattctttaaaattttccaattacctcatccaa 42776624  T
Q  162 acacac 167  Q
    ||||||    
T  42776625 acacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 24705763 - 24705878
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  ||||| ||||||||| |||| ||||||||||||| |||| |||  |||||||||||||| ||||||| |||||||||     
T  24705763 attacttcatccaaacaataacatttaaaaatgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcttcaaaatttttcaattaccc 24705862  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  24705863 catccaaacacactct 24705878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 16516606 - 16516718
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||| ||||||||      ||||||||||||| |||| ||  ||||||||||||||| ||||||||||||||||||    
T  16516606 attacttcatccaaacaataatatttaggaatgaaag-----caattgaatcatttgaattaccaagaattctaaattcttcaaaatttctcaattacct 16516700  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  16516701 catccaaacacactctta 16516718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 5579759 - 5579647
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||  | ||||| ||||||||| |||||||   ||||||||||| |||    
T  5579759 catccaaataaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtttggaattttaaattcttcaaaattttctaattacctcattcaa 5579660  T
Q  162 acacactcttaga 174  Q
    |||||| ||||||    
T  5579659 acacacacttaga 5579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 16299938 - 16299781
Alignment:
Q  10 taaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcat 108  Q
    ||||||||||||| |||  |||||||||||||| |||||       |||||| |||||||||||||  ||| | || |||||||||||||||||||||||    
T  16299938 taaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattactgcatccaaacaaaaatattgataactgaaagtaatttaattgaatcat 16299839  T
Q  109 ttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    |||||||  || ||||| |||||||| ||| ||||  |||||||||||| ||||||||    
T  16299838 ttaaattaactagaattttaaattctctaatattttccaattacctcattcaaacaca 16299781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 17727488 - 17727564
Alignment:
Q  64 tccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaa 140  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  17727488 tccaaacaaaagtattgtgaaatgaaagtaatttaattgaatcatttaaattaccctaaattctaaattctttaaaa 17727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 17727800 - 17727960
Alignment:
Q  12 aaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcattt 110  Q
    ||||||||||| ||| ||||||||||||||| |||||       |||| | ||||||||||| |  |||||||||||||   ||||||||||||| ||||    
T  17727800 aaatttataaaagttgcccaaaaatgatgacaatgaaattttttattattccatccaaacaagaatatttagaaatgaagtcaatttaattgaataattt 17727899  T
Q  111 aaattgccttgaattctaaattctt-taaaatttctcaattacctcatccaaacacactct 170  Q
     |||||| | |||||||||||||||  ||||    ||||||||||||||||||||||||||    
T  17727900 gaattgcttagaattctaaattcttcaaaaaaaattcaattacctcatccaaacacactct 17727960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 19461381 - 19461264
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattcttt-aaaatttctcaattacc 153  Q
    |||| ||||||| ||||| || |||||||||| ||   |||||||||||||||| ||||||||||  |||| |||||||||| |||| |||| |||||||    
T  19461381 attaattcatcccaacaagagcatttagaaataaagacaatttaattgaatcatctaaattgcctaaaattttaaattctttaaaaaattct-aattacc 19461283  T
Q  154 tcatccaaacacactctta 172  Q
    |||| ||||||||||||||    
T  19461282 tcattcaaacacactctta 19461264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10633181 - 10633241
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  10633181 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 10633241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31473999 - 31474062
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||||||| || ||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  31473999 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 31474062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 21012499 - 21012439
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  21012499 taaattgtctagaattttaaattctttaaaatttttaaattacctcatccaaacacactct 21012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 5716072 - 5716190
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||| ||||||||||||  ||||||||||| |   ||||||| | |||||||| |||||| | ||||||||||||| |  |||||||  ||||||||    
T  5716072 attacttgatccaaacaaaaatatttagaaatggagacaatttaactaaatcatttcaattgcttagaattctaaattcatcgaaatttccaaattacct 5716171  T
Q  155 catccaaacacactcttag 173  Q
     ||||||||| ||| ||||    
T  5716172 tatccaaacatactattag 5716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 9449523 - 9449412
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctca 156  Q
    |||| |||| ||||||||  ||||||||  ||||| ||||||||||| |||||| ||||| || ||||||| ||||||| | ||    ||||||||||||    
T  9449523 tactccatctaaacaaaaatatttagaa--gaaagcaatttaattgattcattttaattgtctagaattctgaattcttcacaaaaaatcaattacctca 9449426  T
Q  157 tccaaacacactct 170  Q
    ||||||||||||||    
T  9449425 tccaaacacactct 9449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 29091606 - 29091676
Alignment:
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||| |||| ||| |||||||||||| || |||||||||||| ||||  ||||||||||||||||||    
T  29091606 aatcatttgaattccctagaattctaaatttttcaaaatttctcaaataccctatccaaacacactcttag 29091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 41983368 - 41983417
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactctt 171  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  41983368 aattctaaattctttaaaatttctcaattatcccattcaaacacactctt 41983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 52294766 - 52294609
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaa-tttaat 100  Q
    |||||| ||||||||||||| ||| |||||||||||||||  ||||       |||||| || ||| ||||||| ||||| |||  | | ||| ||||||    
T  52294766 aaaaaattaaaatttataaaagttccccaaaaatgatgacattgaaattttttattactccacccagacaaaagtatttaaaaaatataataaatttaat 52294667  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    |||||||||||||||||||  |||| ||||||| ||||||    ||||||||||||||    
T  52294666 tgaatcatttaaattgcctaaaattttaaattcattaaaaaaattcaattacctcatc 52294609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 4490469 - 4490535
Alignment:
Q  71 aaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattcttta 137  Q
    ||||| ||| |||||||||||||||||||||||||  ||||||||| ||  ||||||||||| ||||    
T  4490469 aaaagtattgagaaatgaaagtaatttaattgaattgtttaaattgtctaaaattctaaattgttta 4490535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 3803726 - 3803779
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaa 175  Q
    |||| |||||||||||||||||   |||||||||||||||||||||||| ||||    
T  3803726 aattttaaattctttaaaattttcaaattacctcatccaaacacactctaagaa 3803779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 29685710 - 29685649
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattg 116  Q
    |||||| |||||||||||||  |||||||| |||| | |||||||||||||||||| |||||    
T  29685710 attactccatccaaacaaaaatatttagaagtgaatgcaatttaattgaatcatttgaattg 29685649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 53760373 - 53760322
Alignment:
Q  121 gaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||| |||||    
T  53760373 gaattataaattcttcaaaatttctcaattactccatccaaacacaatctta 53760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 31334854 - 31334904
Alignment:
Q  66 caaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattg 116  Q
    |||||||||| ||| | |||| |||||||||||||||||||| ||||||||    
T  31334854 caaacaaaagtattgacaaataaaagtaatttaattgaatcacttaaattg 31334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 13088429 - 13088352
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaatt 132  Q
    ||||||||| ||| | ||||  |||||||||| |||  ||||||||| |||||||| ||||||||  |||||||||||    
T  13088429 attacttcacccatataaaaatatttagaaataaaaacaatttaattaaatcatttgaattgcctaaaattctaaatt 13088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 43955081 - 43955048
Alignment:
Q  137 aaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||| |||||||||||||||||||||||||    
T  43955081 aaaatttcccaattacctcatccaaacacactct 43955048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 56339549 - 56339598
Alignment:
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattac 152  Q
    |||||||| |||| |||  |||||||||||||| ||||||||||||||||    
T  56339549 aatcatttgaattacctataattctaaattcttcaaaatttctcaattac 56339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 53470121 - 53469947
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| |||||       |||| |||||||||||||||||||| |||||||||||||||||||    
T  53470121 ccaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttaattagttcatccaaacaaaagaattgagaaatgaaagtaatttaa 53470022  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53470021 ttgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 53469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 36397679 - 36397502
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       |||||||||||||||||||| |||| |||||||||||||||||||||    
T  36397679 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaatt 36397580  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 179  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36397579 gaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaggatatt 36397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 671356 - 671188
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  671356 aaaaaaataaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 671257  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||||| ||  |||| || |||||||||||||||||||||||||||||||||||||||||    
T  671256 gaatcatttaaattgtctataattttatattctttaaaatttctcaattacctcatccaaacacactct 671188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 34089010 - 34089125
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  34089010 attacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacat 34089109  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  34089110 catccaaacacactct 34089125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 48948016 - 48948134
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  48948016 attatttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttttcaattacct 48948115  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||| ||||||||    
T  48948116 catccaaacatactcttag 48948134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 35279638 - 35279470
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       |||||||||||||||||||| |||| |||||||||||||||||||||    
T  35279638 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaatt 35279539  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||| | | |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  35279538 gaatcatttaaattacttagaattctaaattctttaaaatttcccaattgcctcatccaaacacactct 35279470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 43863653 - 43863486
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| || ||       ||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  43863653 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactt-atccaaacaaaagaattgagaaatgaaaataatttaatt 43863555  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43863554 gaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactct 43863486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 24241879 - 24241708
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| | ||||||||||| | |||||       ||| || |||||||||||||  ||| |||||||||||||||||||||    
T  24241879 aaaaaattaaaatttataaaagttgctcaaaaatgatgccaatgaaattttttatttctccatccaaacaaaaatattgagaaatgaaagtaatttaatt 24241780  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24241779 gaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 24241708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 53129594 - 53129434
Alignment:
Q  3 aaaaaactaaaatttataaagtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||        ||||||||||||||||||||||||| |||||||||||||||||||||    
T  53129594 aaaaaattaaaatttataaagttgcccaaaaatgatgacaatgaattttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 53129495  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||||||||| |||||||||||| ||||||    ||||||||||| ||||||    
T  53129494 gaatcatttaaattgccttaaattctaaattccttaaaaaaattcaattacctcgtccaaa 53129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 28181913 - 28181800
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  28181913 attactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattacct 28181814  T
Q  155 catccaaacacact 168  Q
    | ||||||||||||    
T  28181813 cgtccaaacacact 28181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 7976992 - 7977100
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||    
T  7976992 catccaaacaaaaatattgagaaatgaaagtaattgaattgaatcatttaaattgcctaggattcgaaattctttaaaatttcccaattacctcatccaa 7977091  T
Q  162 acacactct 170  Q
    |||||||||    
T  7977092 acacactct 7977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 21731300 - 21731468
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||   ||||||||||||| |||||       ||||||  |||||||||||| |||| | |||| ||||||||||||||    
T  21731300 aaaaaattaaaatttataaaagttgttcaaaaatgatgacaatgaattttattattactctatccaaacaaaaaaattgaaaaataaaagtaatttaatt 21731399  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| ||||||||||||| ||||| |||||||| | |||||| ||||||||||||||||||||||||||    
T  21731400 gaattatttaaattgcctagaattttaaattctcttaaatttatcaattacctcatccaaacacactct 21731468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 34396312 - 34396148
Alignment:
Q  3 aaaaaactaaaatttat-aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| |||||||||| |||||| |||||||||||||||  ||||       ||||||  | ||||||||||| ||| ||||||||||  |||||||||    
T  34396312 aaaaaattaaaatttattaaagttccccaaaaatgatgacattgaaattttttattactctacccaaacaaaagtattgagaaatgaaaagaatttaatt 34396213  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    |||||||||||||||||| ||||| |||| ||||||||||||  |||||||||||||||||||||    
T  34396212 gaatcatttaaattgcctagaattttaaactctttaaaattttccaattacctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 52527444 - 52527559
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||   | |||||||||||| ||||||||||  |||||||||    
T  52527444 attactccatccaaacaaaagtatttaaaaataaaagtaatttaattgaatcatttaaattttttagaattctaaattttttaaaattttccaattacct 52527543  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  52527544 catccaaacacactct 52527559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 38506652 - 38506475
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||  | |||       ||||||| ||||||||||||| ||| ||||||||||  | ||||| |    
T  38506652 aaaaaattaaaatttataaaagttgcccaaaaatgatgataaagaaatttttgattactttatccaaacaaaagtattgagaaatgaaaacattttaaat 38506553  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 179  Q
    ||||||||||||||||||  ||||||||||||||||||||||  ||||||| |||| |||||||||||| ||| ||||    
T  38506552 gaatcatttaaattgcctaaaattctaaattctttaaaattttccaattacttcattcaaacacactctaagagtatt 38506475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 48824745 - 48824637
Alignment:
Q  59 cttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    |||||||||||||| || ||| | |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||| |||    
T  48824745 cttcatccaaacaagagtattgataaatgaaaataatttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattaccttatc 48824646  T
Q  159 caaacacac 167  Q
    |||||||||    
T  48824645 caaacacac 48824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 21307226 - 21307111
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||  ||| ||||||||||| | |||||||||||||||| ||||  ||  ||||||||||||||||||||||| |||||||||    
T  21307226 attactccatccaaacaaaaatattgagaaatgaaagcattttaattgaatcatttcaattatctaaaattctaaattctttaaaatttcccaattacct 21307127  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  21307126 catccaaacacactct 21307111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 645850 - 645728
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||| |||||||||| ||| |||||||||| ||||||||| ||||||||| |||| | | |||||||||||||||||||||||  |||||||||    
T  645850 attactccatacaaacaaaagtattgagaaatgaaaataatttaatcgaatcatttgaattacttggaattctaaattctttaaaattttccaattacct 645751  T
Q  155 catccaaacacactcttagaata 177  Q
    |||||||||| ||| ||||||||    
T  645750 catccaaacatactattagaata 645728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 28092044 - 28092216
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| |||||||||||||||||||  ||||       |||| | || ||| ||||||| ||| ||||||||||| |||||||    
T  28092044 ccaaaaaattaaaatttataaaagtttcccaaaaatgatgacattgaaattttttatta-tccacccacacaaaagtattgagaaatgaaagaaatttaa 28092142  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||  |||||| ||||||||||||  ||||||||    
T  28092143 ttgaatcatataaattgcctagaatt-taaattctttaaaattttccaattagctcatccaaacattctcttaga 28092216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 47767816 - 47767978
Alignment:
Q  12 aaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcattt 110  Q
    ||||||||||| ||| |||||||||||||||||| |        |||||| ||||||||||| |  |||||  |||||||| ||||||||||||||||||    
T  47767816 aaatttataaaagttgcccaaaaatgatgacgataattttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcattt 47767915  T
Q  111 aaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
     ||||  |||||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  47767916 gaattatcttgaattctaaattcttcaaaatttctcaaatactccatccaaacacactcttag 47767978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 50168306 - 50168190
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||||||||||   ||||||||||||  ||||||||||||  |||||||  |||||||||||||||||||||||||    
T  50168306 attactccatccaaacaagaatatttagaaatgaagacaatttaattgaagtatttaaattgccaagaattctcgattctttaaaatttctcaattacct 50168207  T
Q  155 catccaaacacactctt 171  Q
    |||||||||||||||||    
T  50168206 catccaaacacactctt 50168190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 37054830 - 37054949
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  37054830 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 37054929  T
Q  155 catccaaacacactcttaga 174  Q
    ||||||||||||||||||||    
T  37054930 catccaaacacactcttaga 37054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 42005588 - 42005473
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| || |||||  |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  42005588 attactccatccaaacaatagtatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 42005489  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  42005488 catccaaacacactct 42005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 2105171 - 2105279
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||  |||||||  ||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||  |||||||    
T  2105171 catccaaacaataatatttaagaatgaaaccaatttaattgaatcatttaaattacctagaattataaattcttcaaaatttctcaattactccatccaa 2105270  T
Q  162 acacactct 170  Q
    |||||||||    
T  2105271 acacactct 2105279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 30766932 - 30767106
Alignment:
Q  1 ccaaaaaactaaaatttat-aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| | |||||||| |||||| |||||||| |||||| || ||       |||||| ||||||||||| |  |||||  |||||||  |||||||    
T  30766932 ccaaaaaattgaaatttatgaaagttgcccaaaaacgatgacaataaatttttttattactccatccaaacaataatatttaagaatgaaaacaatttaa 30767031  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||||||| |||| ||| ||||||||||||||| ||||||||||||  ||  ||| ||||||||||||||||    
T  30767032 ttgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaacactccattcaaacacactcttaga 30767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 26547412 - 26547527
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||  |||||||| |||| ||||||||||||| |||| |||  |||||||||||| | |||| ||||||||||||     
T  26547412 attacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcatcaaaa-ttctcaattaccc 26547510  T
Q  155 catccaaacacactctt 171  Q
    |||||||||||||||||    
T  26547511 catccaaacacactctt 26547527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 13339206 - 13339118
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaattt 143  Q
    |||||| |||||||||||||  ||||| |||| |||  |||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  13339206 attactccatccaaacaaaaatatttaaaaataaaaaaaatttaattgaatcatttaaattgcctaaaattctaaattcttcaaaattt 13339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 55460645 - 55460810
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| | ||||||||||| ||| ||||||||||||||| |||||       |||||| ||||||||||||   |||||| |||||| | |||||||    
T  55460645 ccaaaaaatttaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattactccatccaaacaaatatatttagtaatgaaggcaatttaa 55460744  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacac 165  Q
    ||||| ||||| ||||||||  |||||||||||||| ||||    ||| || ||||||||||||||    
T  55460745 ttgaaacatttgaattgcctaaaattctaaattcttaaaaaaaaatcatttgcctcatccaaacac 55460810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 7302827 - 7302942
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||| | ||||  || ||||||||||||||| |||||||||||| |||      
T  7302827 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatatgaattatctagaattctaaattcttcaaaatttctcaaatactc 7302926  T
Q  155 catccaaacacactct 170  Q
     |||||||||||||||    
T  7302927 aatccaaacacactct 7302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 13176306 - 13176195
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||| ||||||||  ||||| |||| | || |||||||||||||||||||||||| ||  |||||||||||||| |||||||  || ||||||    
T  13176306 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacct 13176207  T
Q  155 catccaaacaca 166  Q
    ||| ||||||||    
T  13176206 catacaaacaca 13176195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 6836721 - 6836590
Alignment:
Q  10 taaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcat 108  Q
    ||||||||||||| |||  |||||||||||||| |||||       ||| || |||||||||||||  ||| | ||||||||| | ||||||||||||||    
T  6836721 taaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattgctccatccaaacaaaaatattgataaatgaaagcattttaattgaatcat 6836622  T
Q  109 ttaaattgccttgaattctaaattctttaaaa 140  Q
    || ||||||||  |||||||||||||||||||    
T  6836621 ttgaattgcctaaaattctaaattctttaaaa 6836590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 19475966 - 19476028
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  19475966 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 19476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 46707005 - 46707139
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaa-gaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       |||||| | |||||| |||| | ||| | ||||||||||||||||||    
T  46707005 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaaattttttattactccgtccaaataaaaagtattgaaaaatgaaagtaatttaat 46707104  T
Q  101 tgaatcatttaaattgccttgaattctaaattctt 135  Q
    ||||| ||||||||||| | |||||||||||||||    
T  46707105 tgaataatttaaattgcttagaattctaaattctt 46707139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 36636287 - 36636367
Alignment:
Q  81 agaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||||| |||||||| |||||| ||| || ||||| ||| ||||||||||||||||||||| | |||||||    
T  36636287 agaaatgaaagtaattaaattgaataatttaatttgtctagaattataatttctttaaaatttctcaattatcgcatccaa 36636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 44288126 - 44288022
Alignment:
Q  68 aacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacac 167  Q
    |||||||  ||||||||||||| | |||||||||||||| ||| ||||| ||  |||| |||||| || ||||||||  ||||||||| |||||||||||    
T  44288126 aacaaaattatttagaaatgaaggcaatttaattgaatcttttgaattgtctaaaattataaatttttcaaaatttcctaattacctcgtccaaacacac 44288027  T
Q  168 tctta 172  Q
    |||||    
T  44288026 tctta 44288022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 8762276 - 8762338
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  8762276 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctta 8762338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 31189027 - 31188918
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||  ||||||||||   |  |||||||||||||||||| |||||  | ||||||||| |||||||||||||||||| | | |||| |||    
T  31189027 catccaaacaaaaatatttagaaatcctaacaatttaattgaatcatttgaattgtttagaattctaatttctttaaaatttctcaa-tccttcattcaa 31188929  T
Q  162 acacactctta 172  Q
    |||||||||||    
T  31188928 acacactctta 31188918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 33871824 - 33871764
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  33871824 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccacacacactct 33871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 47714426 - 47714486
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| |||||  |||||||||||||||||  ||||||||||||||||||||||||    
T  47714426 taaattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactct 47714486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 44329488 - 44329566
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaat 141  Q
    |||||||||||||| ||| ||||  |||||||||||| ||||||||||||||| || |  |||| |||||||||||||||    
T  44329488 catccaaacaaaagcattaagaagcgaaagtaattta-ttgaatcatttaaatggcttaaaattttaaattctttaaaat 44329566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 2733026 - 2733084
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaatta 151  Q
    |||||||||||||  ||| |||||||| | ||||||||||| |||||||||||||||||    
T  2733026 aatttaattgaatttttttaattgcctagtattctaaattccttaaaatttctcaatta 2733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 47000170 - 47000270
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||  ||||| ||||||| || ||||||||||||||||| |||||| |   |||||||   ||| ||||||| ||||||||||||| ||||    
T  47000170 atccaaacaaaaatatttaaaaatgaatgtcatttaattgaatcatttgaattgcttaacattctaa---cttaaaaattt-tcaattacctcattcaaa 47000265  T
Q  163 cacac 167  Q
    |||||    
T  47000266 cacac 47000270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 47283908 - 47283791
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaattt------ctcaattacctc 155  Q
    ||||||||||| |  |||||  |||||||| ||||||| ||||||||||||||| | |  |||| ||||||||| |||||||      |||||||||  |    
T  47283908 catccaaacaataatatttaagaatgaaagcaatttaaatgaatcatttaaattacttaaaattttaaattcttcaaaatttctcattctcaattactcc 47283809  T
Q  156 atccaaacacactcttag 173  Q
    ||||||||||||||||||    
T  47283808 atccaaacacactcttag 47283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 15760214 - 15760161
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaatt 115  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||||||| ||||    
T  15760214 catccaaacaaaagtattcagaaatgaaaacaatttaattgaatcatttgaatt 15760161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 46636305 - 46636376
Alignment:
Q  77 atttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaa 148  Q
    ||||| ||||||| | |||||||||||||||||| |||||||| |||||  |||   |||||||||||||||    
T  46636305 atttaaaaatgaatgcaatttaattgaatcatttgaattgcctagaatttcaaaaaatttaaaatttctcaa 46636376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 45867192 - 45867281
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttc 144  Q
    ||||||| ||||||||||||  ||||| ||||||| | |||| |||||||| |||| |||||||   | ||||| ||||| |||||||||    
T  45867192 attactttatccaaacaaaaacatttaaaaatgaaggaaattcaattgaattatttgaattgcccaaagttctagattctctaaaatttc 45867281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 54761474 - 54761417
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 179  Q
    |||| |||||||| ||||||||   |||||||||||||||||||||||| ||| ||||    
T  54761474 aattttaaattctgtaaaattttcaaattacctcatccaaacacactctaagagtatt 54761417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 946760 - 946929
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| |||  |||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  946760 ccaaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttt-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 946858  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  946859 ttgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 15467654 - 15467477
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| | ||||||||||||| |||||       |||||||||| |||||||||||||| |||||||||||||||||||||    
T  15467654 aaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttttattacttcattcaaacaaaagaattgagaaatgaaagtaatttaatt 15467555  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 179  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  15467554 gaatcatttaaattgcctagaattctaaattctttaaaatttcttaattacctcatccaaacacactcttaggatatt 15467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 28632294 - 28632126
Alignment:
Q  3 aaaaaactaaaatttat-aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| |||||||||| |||||| ||||||||||||||| |||||       |||||||||||||||||||| |||| |||||||||||||||||||||    
T  28632294 aaaaaattaaaatttattaaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaatt 28632195  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  28632194 gaatcatttaaattgcctagaattctaaattttttataatttctcaattatctcatccaaacacactct 28632126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 21267461 - 21267343
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||| ||    
T  21267461 attacttcatacaaacaaaagaattgagaaatgaaagtaatttaattgaatcatctaaattgcctataattcgaaattctttaaaatttctcaattatct 21267362  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||||||||||||    
T  21267361 catccaaacacactcttag 21267343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 32647673 - 32647829
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| ||||||||| ||||| |||||        |||||| |||||||||||||| ||||||||||||||||||||||||    
T  32647673 aaaaaattaaaatttataaaagttgcccaaaaataatgacaatgaatttgttttattactccatccaaacaaaagtatttagaaatgaaagtaatttaat 32647772  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcat 157  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  32647773 tgaatcatttaaattttctagaattctaaattctttaaaatttctcaattacctcat 32647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 41822241 - 41822078
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       |||||| |||||||||||||| ||| ||||||||||| | ||||| |    
T  41822241 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattactccatccaaacaaaagtattgagaaatgaaagcattttaaat 41822142  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacac 165  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  41822141 gaattatttaaattgcctagaattctaaattctgtaaaatttctcaattacttcatccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 6470389 - 6470225
Alignment:
Q  11 aaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatt 109  Q
    |||||||||||| ||| |||||||||||||||  ||||       |||||| |||||||||||||  ||| | |||||||| |||||||||| |||||||    
T  6470389 aaaatttataaaagttgcccaaaaatgatgacagtgaaatattgtattactccatccaaacaaaactattgaaaaatgaaaataatttaattaaatcatt 6470290  T
Q  110 taaattgccttgaattctaaattcttt-aaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  6470289 taaattacctagaattctaaattctttaaaaatttctcaattgcctcatccaaacacactcttag 6470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 35499483 - 35499601
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||   |||||| |    
T  35499483 attactccatccaaataaaagtattgagaaatgaatgtaatttaattgaatcatttaaattatctagaattctaaattctttaaaattttcaaattactt 35499582  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||||||||||||    
T  35499583 catccaaacacactcttag 35499601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 50472150 - 50472252
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||| ||    
T  50472150 attactccatccaaacaaaagtattgaaaaatgaaagtaatttaattgaataatttaaattgcctaaaattctaaattctttaaaatttctcaattatct 50472249  T
Q  155 cat 157  Q
    |||    
T  50472250 cat 50472252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 31166647 - 31166761
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatc-atttaaattgccttgaattctaaattctttaaaatttctcaattacctc 155  Q
    |||| ||| |||||||||| ||| |||||||||||||||||||| ||||| |||||||||| || || |||||||||||||| ||||||||||||||||     
T  31166647 tactccattcaaacaaaagtattgagaaatgaaagtaatttaatcgaatccatttaaattgactagatttctaaattctttacaatttctcaattacctg 31166746  T
Q  156 atccaaacacactct 170  Q
    |||||||||||||||    
T  31166747 atccaaacacactct 31166761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 44571572 - 44571738
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||| ||| ||| ||||||||||||| | |||||       ||| || |||||||||||||  ||| |||||| ||||||||||||||    
T  44571572 aaaaaattaaaatttacaaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaaacaaaaatattgagaaataaaagtaatttaatt 44571671  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||| |||||||| ||| | ||||||||||||||| |||||| ||||||||||||| |||||||||    
T  44571672 gaatcgtttaaattacctaggattctaaattctttataatttcccaattacctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 37036612 - 37036504
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||| |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||||| |||||||    
T  37036612 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttcttaattaccccatccaa 37036513  T
Q  162 acacactct 170  Q
    |||||||||    
T  37036512 acacactct 37036504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 48953925 - 48954097
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| |||||||| |||| |||  |||||||||||||  |||||       |||||||||||||| |||||  ||| | |||||||||||||||||    
T  48953925 ccaaaaaattaaaatttctaaaagttgtccaaaaatgatgataatgaaattttttattacttcatccaa-caaaaatattaaaaaatgaaagtaatttaa 48954023  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||||||| || ||||  || ||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  48954024 ttgaatcatttagatagcctaaaactctaaattcttcaaaatttctcaattagctcatccaaacatactcttag 48954097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 37446998 - 37446883
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||| |||||||| |||||||||||||||||| |||| ||| ||||| ||||||||| ||||||||| |||||||     
T  37446998 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccc 37446899  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  37446898 catccaaacacactct 37446883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 39887507 - 39887621
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||| |||||||| |||||||||||||||||| |||| |||  |||||||||||||| ||||||||||||||||  |||||||    
T  39887507 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaa 39887606  T
Q  162 acacactcttagaat 176  Q
    ||||||||| |||||    
T  39887607 acacactctaagaat 39887621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 220627 - 220704
Alignment:
Q  95 tttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  220627 tttaattgaatcatttaaattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactctta 220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 32128532 - 32128636
Alignment:
Q  69 acaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||| ||| |||||| |||| ||||||||||||||||| ||||| |||  |||| ||||||||||||||||||||||||||||| | ||||||||||    
T  32128532 acaaaagtattgagaaattaaaggaatttaattgaatcattaaaattacctaaaattttaaattctttaaaatttctcaattacctcgttcaaacacact 32128631  T
Q  169 cttag 173  Q
    |||||    
T  32128632 cttag 32128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 37447541 - 37447426
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||| || |  |||||  ||| |||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||| |    
T  37447541 attactccatccaaataataatatttaagaataaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaaatactt 37447442  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  37447441 catccaaacacactct 37447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 8225214 - 8225324
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  ||| || |||||||| ||||||||||| |||||| |||| |||  |||||||||||||| ||||||||||||||||  |||||||    
T  8225214 catccaaacaataatattaaggaatgaaagcaatttaattgattcatttgaattacctaaaattctaaattcttcaaaatttctcaattactccatccaa 8225313  T
Q  162 acacactctta 172  Q
    |||||||||||    
T  8225314 acacactctta 8225324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 44571057 - 44571224
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| | ||||||||||| ||| ||||||||||||||| || ||       ||| || ||||||||||| |  |||||  |||||||| |||||||    
T  44571057 ccaaaaaattgaaatttataaaagttgcccaaaaatgatgacaataaatttttttattgctccatccaaacaataatatttaagaatgaaagcaatttaa 44571156  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacac 167  Q
    ||||||||||| |||| ||| ||||| ||||||||| |||||||||||| |||  |||||||||||||    
T  44571157 ttgaatcatttgaattacctagaattttaaattcttcaaaatttctcaaatactccatccaaacacac 44571224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 23956094 - 23955981
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||| |||||||||  ||| |||||| ||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||  |||| |||    
T  23956094 attactccattcaaacaaaaatattaagaaataaaagtaatttaattgaatcatttaaattgactaaaattctaaattttttaaaatttcctaattgcct 23955995  T
Q  155 catccaaacacact 168  Q
    | |||||| |||||    
T  23955994 cttccaaatacact 23955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 41577909 - 41577841
Alignment:
Q  58 acttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattc 126  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41577909 acttcatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattc 41577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 10166936 - 10167047
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||||||||||   | |||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||| |||||     
T  10166936 catccaaacaataatatttagaaatgaagacattttaattgaatcatttgaattgcctagaattttaaattctttaaaatttatcaattaccttatccag 10167035  T
Q  162 acacactcttag 173  Q
    |||  |||||||    
T  10167036 acattctcttag 10167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 47541911 - 47541851
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  47541911 taaattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 41481065 - 41480952
Alignment:
Q  59 cttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatc 158  Q
    |||||||||||  |||| ||| | |||||||| |||||||||||||| |||| || |||||  |||| ||||| ||||||||  | | ||||||||||||    
T  41481065 cttcatccaaatgaaagtattgataaatgaaattaatttaattgaataatttgaactgcctaaaattttaaatgctttaaaaaatttaaattacctcatc 41480966  T
Q  159 caaacacactctta 172  Q
    ||||||||||||||    
T  41480965 caaacacactctta 41480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 37448038 - 37447971
Alignment:
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||| |||| ||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  37448038 aatcatttgaattccctagaattctaaattcatcaaaatttctcaattaccccatccaaacacactct 37447971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 12293080 - 12293022
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  12293080 aattgcctagaattctaaattctttgagatttcccaattacctcatccaaacacactct 12293022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 31196903 - 31196953
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  31196903 aattctaaattctttaaaatttctcaattatctcatcctaacacactctta 31196953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 4663773 - 4663861
Alignment:
Q  83 aaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||| | ||||||||||| |||| ||| || | ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||    
T  4663773 aaatgaaagcattttaattgaataatttgaat-gcttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactctta 4663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 24273142 - 24273081
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||| | ||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  24273142 aattgcgtagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 24273081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 32202212 - 32202297
Alignment:
Q  81 agaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    ||||||||||||||||||||||||||||||||||| | |  |||||||||   ||| |||||||  ||||| ||| ||||||||||    
T  32202212 agaaatgaaagtaatttaattgaatcatttaaattacttaaaattctaaaaaatttcaaatttccaaattatctcgtccaaacaca 32202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 41822829 - 41822752
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| |||| |||  |||||||||||||| ||||||||| || |||  || |||||||||||||    
T  41822829 aatttaattgaatcatttgaattacctataattctaaattcttcaaaatttcttaaatactccacccaaacacactct 41822752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 31195955 - 31196023
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaat 131  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||||||||||  ||  |||||||||||    
T  31195955 atccaaacaaaattattgagaaatgaaagtaatttaatagaatcatttaaatcacccagaattctaaat 31196023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 52134983 - 52134877
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||| |||||||||||||||  || || ||||||| ||||||||||||| | |||| |||||| |  ||||||||||| |||||||  | |||||||| |    
T  52134983 attagttcatccaaacaaaaatatctaaaaatgaatgtaatttaattgagttatttgaattgcttaaaattctaaattatttaaaaaat-tcaattacat 52134885  T
Q  155 catccaaa 162  Q
    ||||||||    
T  52134884 catccaaa 52134877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 13182107 - 13182163
Alignment:
Q  109 ttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacac 165  Q
    |||||||||||  ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  13182107 ttaaattgcctaaaatttcaaattcttttaaatttctcaattgcctcatccaaacac 13182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 14406154 - 14406086
Alignment:
Q  64 tccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaatt 132  Q
    |||||| ||||  |||||||||| |||| |||| |||||||||||||||||| |||  |||||||||||    
T  14406154 tccaaataaaaacatttagaaataaaagaaattcaattgaatcatttaaattacctaaaattctaaatt 14406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 26501002 - 26500947
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacac 165  Q
    |||||| ||| ||||| |||||||||||||||||   |||||||||||||||||||    
T  26501002 taaattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 47165123 - 47165072
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||| |||||||||||||||||   |||||||||||||||||||||| ||||    
T  47165123 aattttaaattctttaaaattttcaaattacctcatccaaacacactgttag 47165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 32288049 - 32288012
Alignment:
Q  135 ttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  32288049 ttaaaatttctcaattaccacatccaaacagactctta 32288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 23969487 - 23969439
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| ||||||||||||||  | ||||||||| ||||||||||||||||    
T  23969487 aattttaaattctttaaaaaatttcaattaccccatccaaacacactct 23969439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 28538845 - 28538675
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  28538845 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 28538746  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28538745 gaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 28538675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 2411693 - 2411861
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2411693 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 2411792  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2411793 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacactctct 2411861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 14602939 - 14602771
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       |||||| |||||||||||||||||| |||||||||||||||||||||    
T  14602939 aaaaaattaaaatttataaaagttgcccaaaaatgatgactatgaatatttttattactccatccaaacaaaagaattgagaaatgaaagtaatttaatt 14602840  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14602839 gaattatttaaattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacacactct 14602771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 35456186 - 35456356
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       |||||| |||||||||||||||||| |||||||||||||||||||||    
T  35456186 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaatatttttattactccatccaaacaaaagaattgagaaatgaaagtaatttaatt 35456285  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||| ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35456286 gaattatttaaattgcctagaattctaaattctttaaaaattttcaattacctcatccaaacacactctta 35456356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 42816904 - 42817074
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| | ||||||||||||| |||||       ||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  42816904 aaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaatttttgtattactttatccaaacaaaagaattgagaaatgaaagtaattcaatt 42817003  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42817004 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatcctaacacactctta 42817074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 39342275 - 39342160
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39342275 attacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacct 39342176  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  39342175 catccaaacacactct 39342160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 40496100 - 40496268
Alignment:
Q  3 aaaaaactaaaatttataaagtttc-ccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| |||||||||||||  ||| |||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  40496100 aaaaaattaaaatttataaaagttctccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 40496199  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  40496200 gaatcatttaaattgcctagaattataaattctttaaaatttcttaattacctcatccaaacatactct 40496268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 23548234 - 23548117
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  23548234 attactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctcaattacct 23548135  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  23548134 catccaaacacactctta 23548117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 36328443 - 36328326
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  36328443 attactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttaaaatttctcaattacct 36328344  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  36328343 catccaaacacactctta 36328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 30080476 - 30080312
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||||||||||||||| || |||||       |||||| |||||||||||||| ||| |||||| ||||||||||||||    
T  30080476 aaaaaattaaaatttataaaagtttcccaaaaatgataacaatgaaattttttattactccatccaaacaaaagtattgagaaataaaagtaatttaatt 30080377  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| |||||||    
T  30080376 gaatcatttaaattgcttagaattctaaattcttcaaaatttctcaattacctcatcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 45984768 - 45984885
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||     
T  45984768 attactccgtccaaacaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccc 45984867  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  45984868 catccaaacacactctta 45984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 45989128 - 45989245
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||     
T  45989128 attactccgtccaaacaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctattaccc 45989227  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  45989228 catccaaacacactctta 45989245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 43791456 - 43791573
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  43791456 attactccatccaaacaaaagtattgagaaatgaaaataatttaattgaatcatttaaattgccaagaattctaaattctttaaaattttccaattacct 43791555  T
Q  155 catccaaacacactctta 172  Q
    ||||||||||||||||||    
T  43791556 catccaaacacactctta 43791573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 9784622 - 9784455
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||| ||||| |||||       ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  9784622 aaaaaattaaaatttataaaagttgcccaaaaattatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaataaaagtaatttaatt 9784523  T
Q  102 gaatcatttaaattgccttgaattctaaattc-tttaaaatttctcaattacctcatccaaacacact 168  Q
    ||||||| ||||||||||  |||| ||||||| ||||||||||||||||||| || ||||||||||||    
T  9784522 gaatcatctaaattgcctaaaattttaaattcttttaaaatttctcaattacttcgtccaaacacact 9784455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 26416355 - 26416471
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  26416355 attacttcatccaaacaaaagtattaaaaaatgaaagtaatttaattgaattatttagattgcctagaattctaaattcttcaaaatttctcaattacct 26416454  T
Q  155 catccaaacacactctta 172  Q
    ||| ||||||||||||||    
T  26416455 cat-caaacacactctta 26416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 37460640 - 37460466
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| |||||       |||| | |||||||||||||| ||| |||||| |||| | ||| |    
T  37460640 ccaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttattattccatccaaacaaaagtattgagaaattaaagcattttta 37460541  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    |||||| |||| ||||| || ||||| |||||||||||||| || |||||||||||||||||| |||||||||||    
T  37460540 ttgaattatttgaattgtctagaattttaaattctttaaaaattttcaattacctcatccaaatacactcttaga 37460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 30629440 - 30629602
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||        ||||||||||||||||||||||||| | ||||||||||||||||||    
T  30629440 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaat 30629539  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaac 163  Q
    |||||||||||||||||||  |||| |||||| |  ||||    |||||||||||||||||||    
T  30629540 tgaatcatttaaattgcctaaaattttaaattttaaaaaaaaaatcaattacctcatccaaac 30629602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 41442718 - 41442601
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||| |||||| | |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||     
T  41442718 attactccatccaaacaataatatttaggaatgaaggcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaattaccc 41442619  T
Q  155 catccaaacacactctta 172  Q
     |||||||||||||||||    
T  41442618 aatccaaacacactctta 41442601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 30587578 - 30587436
Alignment:
Q  20 aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcct 119  Q
    |||||| |||||||||||||| ||||||        || || |||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||    
T  30587578 aaagttgcccaaaaatgatgatgatgaaattgttttttgctccatccaaacaa--gaattgagaaatgaaagtaatttaattgaatcttttaaattgcct 30587481  T
Q  120 tgaattctaaattctttaaaatttctcaattacctcatccaaaca 164  Q
     |||||||||||||| ||||||||  |||||||||| ||||||||    
T  30587480 agaattctaaattctctaaaattttccaattacctcgtccaaaca 30587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 40495634 - 40495749
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||  |||||||  |||| ||||||||||||| |||| |||  |||||||||||||| ||||||||||||||||||    
T  40495634 attacttcatccaaacaataacatttaagaatgaaaacaattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattacct 40495733  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  40495734 catccaaacacactct 40495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 45181863 - 45181753
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||  ||||||||||||| | || |||||||||| |||| |||||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  45181863 atccaaacaaaaagatttagaaatgaaggcaaattaattgaataatttcaattgcctagaattctaaactctctaaaattt-tcaattacctcatccaaa 45181765  T
Q  163 cacactcttaga 174  Q
    ||||||||||||    
T  45181764 cacactcttaga 45181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 13814617 - 13814504
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||  |||||||| |||| ||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||     
T  13814617 attacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccc 13814518  T
Q  155 catccaaacacact 168  Q
     || ||||||||||    
T  13814517 tattcaaacacact 13814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 40667737 - 40667831
Alignment:
Q  20 aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaatt 115  Q
    |||||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40667737 aaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaa-taatttaattgaatcatttaaatt 40667831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 32650964 - 32651076
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaag-taatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatcca 160  Q
    |||||||||||| | ||| | ||| ||||| ||||||||||  |||||||||||||||| | ||||| |||||||||| ||||| |||||||||||||||    
T  32650964 catccaaacaaaggtattgaaaaacgaaaggtaatttaattacatcatttaaattgcctaggattctgaattctttaagatttcccaattacctcatcca 32651063  T
Q  161 aacacactcttag 173  Q
    ||| |||||||||    
T  32651064 aactcactcttag 32651076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 14790554 - 14790621
Alignment:
Q  107 atttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||||||||| | |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  14790554 atttaaattgcctaggattctaaattctttaaaattttccaattacctcatccaaacacactcttaga 14790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 46699862 - 46699747
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  ||||||||||||| ||||||||||||||| |||| |||||| |  |||||||||||||| |||||||||||| || |     
T  46699862 attactccatccaaacaataatatttagaaatgaaggtaatttaattgaataatttgaattgcataaaattctaaattcttcaaaatttctcaactatcc 46699763  T
Q  155 catccaaacacactct 170  Q
    | || |||||||||||    
T  46699762 cgtctaaacacactct 46699747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 38320751 - 38320825
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||| ||||||| |||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  38320751 aatttaattgtatcatttgaattgcctagaattttaaattctttaaaattt-tcaattaccacatccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 26162045 - 26161984
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  26162045 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttag 26161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 19865725 - 19865612
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| | ||||||||||||| |||||       ||||||  ||||||||||||| ||  |||||||||| ||||||||||    
T  19865725 aaaaaattaaaatttataaaagttgctcaaaaatgatgacaatgaaattttttattactcaatccaaacaaaagtatcgagaaatgaaattaatttaatt 19865626  T
Q  102 gaatcatttaaatt 115  Q
    ||||||||||||||    
T  19865625 gaatcatttaaatt 19865612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25188962 - 25188794
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||| ||| ||| || |||||||||||| |||||       |||||| |||||||||||||  ||||| |||| || | |||||||    
T  25188962 ccaaaaaaataaaatttacaaaagttgccaaaaaatgatgacaatgaaatttt--attactccatccaaacaaaaatatttaaaaattaaggcaatttaa 25188865  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| |||||||||||| || |||||||||||| || ||||    ||||||||| |||||||| |||||||    
T  25188864 ttgagtcatttaaattgtctagaattctaaattattcaaaaaaattcaattaccacatccaaatacactct 25188794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 35488688 - 35488763
Alignment:
Q  96 ttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||||||| | ||  |||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  35488688 ttaattgaatcatttaaataggctaaaattttaaattctttaaaattt-tcaattacatcatccaaacacactctta 35488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 764882 - 765001
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctt-taaaatttctcaattacc 153  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||||||||| |||| |||||||   ||||||||  ||||  ||||  | ||||||| |    
T  764882 attactttatccaaacaaaaatatttagaaattaaagtaatttaattgaataatttgaattgcccgtaattctaatatcttgaaaaaaatttcaattatc 764981  T
Q  154 tcatccaaacacactcttag 173  Q
     |||||||||||||||||||    
T  764982 ccatccaaacacactcttag 765001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 3905348 - 3905247
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||         |||||  || |||||||||||||||||||||||||||||||| ||||    
T  3905348 catccaaacaaaagtattgggaaatgaaagtaattaaattgaat---------tgcctataaatctaaattctttaaaatttctcaattacctcaaccaa 3905258  T
Q  162 acacactcttag 173  Q
    | ||||||||||    
T  3905257 a-acactcttag 3905247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 40667834 - 40667873
Alignment:
Q  134 tttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40667834 tttaaaatttctcaattacctcatccaaacacactcttag 40667873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 18926287 - 18926202
Alignment:
Q  55 attacttcatccaaacaaaag-aatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaa 140  Q
    |||||||||||||| |||||  ||| || |||| ||||||||||||||||||||||||||||| ||  ||||| |||||||||||||    
T  18926287 attacttcatccaagcaaaaataatgta-aaataaaagtaatttaattgaatcatttaaattggctataattcaaaattctttaaaa 18926202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 46700599 - 46700663
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcct 119  Q
    |||||| || ||||||||||| ||| | ||||||||  |||||||||||||||||||||||||||    
T  46700599 attactccacccaaacaaaagtattgaaaaatgaaataaatttaattgaatcatttaaattgcct 46700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 6498674 - 6498611
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||||| ||||| ||||   |||||||||||  |||||||||||||||||||||||||||    
T  6498674 taaattgcctagaattttaaagaatttaaaatttccaaattacctcatccaaacacactcttag 6498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 29639105 - 29639063
Alignment:
Q  128 aaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  29639105 aaattctttaaaattttcaaattacctcatccaaacacactct 29639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 45967521 - 45967578
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaatt 150  Q
    ||||||||| ||| ||||||||||| |  |||| ||||||||||||||||| ||||||    
T  45967521 aatttaattaaattatttaaattgcttaaaattttaaattctttaaaatttgtcaatt 45967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 1580381 - 1580441
Alignment:
Q  113 attgccttgaattctaaattctttaaaatttctcaattacctcatccaa-acacactctta 172  Q
    |||||||  |||| ||||||||||||||  | ||||||||||||||||| |||||||||||    
T  1580381 attgcctaaaattttaaattctttaaaaaatttcaattacctcatccaacacacactctta 1580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 15991331 - 15991434
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||||| | |||| ||||||||  ||||||||| ||| |||| ||||| ||  |||||||||||||| ||||    ||| |||||| ||||||    
T  15991331 catccaaacaaaata-tttaaaaatgaaaacaatttaattaaattatttgaattgtctaaaattctaaattcttgaaaaaaattcagttaccttatccaa 15991429  T
Q  162 acaca 166  Q
    |||||    
T  15991430 acaca 15991434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 7533 - 7688
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7533 aaaaaaataaaatttataaaagttgcccaaaaatgatgacaatgaatatttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 7632  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcat 157  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7633 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcat 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 41761913 - 41761744
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn-attacttcatccaaacaaaagaatttagaaatgaaagtaatttaat 100  Q
    |||||| ||||||||||||| ||| ||||||||||||||| |||||        ||||||||||||||||||||||||| | ||||||||||||||||||    
T  41761913 aaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaattttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaat 41761814  T
Q  101 tgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41761813 tgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactct 41761744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 927682 - 927850
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| |||  |||||||||||||| |||||       ||||||||||||||||||||||||| |||||||||||||||||||||    
T  927682 aaaaaattaaaatttataaaagttgtccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatt 927781  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
     |||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  927782 aaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcattcaaacacactct 927850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 12480282 - 12480452
Alignment:
Q  4 aaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    ||||| ||||||||||||| ||| ||||||||||||||  |||||       |||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  12480282 aaaaattaaaatttataaaagttgcccaaaaatgatgataatgaaattttttattacttcatcctaacaaaagtattgagaaatgaaagtaatttaattg 12480381  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12480382 aatcatttaaattgcttagaattctaaattctttaaaattttccaattacctcatccaaacacactcttag 12480452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 17542054 - 17541880
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||||||| | |||||       ||| || |||||||||||||  ||| |||||| ||||||||||||    
T  17542054 ccaaaaaaataaaatttataaaagttgcccaaaaatgatggcaatgaaattttttatttctccatccaaacaaaaatattgagaaattaaagtaatttaa 17541955  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17541954 ttgaatcatttaaattgtctaggattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 17541880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 32249764 - 32249649
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||    
T  32249764 attactccatccaaacaaaagtattgagaaataaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttcaaattacct 32249665  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  32249664 catccaaacacactct 32249649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 22304645 - 22304736
Alignment:
Q  83 aaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaga 174  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22304645 aaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacacacttaga 22304736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 1209049 - 1209213
Alignment:
Q  5 aaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattga 103  Q
    |||| ||||||||||||| ||| ||||||||||||||| |||||       |||||||||| |||||||||| ||| | |||||||||||||||||||||    
T  1209049 aaaattaaaatttataaaagttacccaaaaatgatgacaatgaaattttttattacttcattcaaacaaaagtattgaaaaatgaaagtaatttaattga 1209148  T
Q  104 atcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||| ||  | ||||||||||||||||||||||||||   ||||||||||||||||||    
T  1209149 atcatttaaattgtctaaatttctaaattctttaaaatttctcaat--gctcatccaaacacactct 1209213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 28490347 - 28490456
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattcttt-aaaatttctcaattacctcatcca 160  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  | ||||||||||||||||    
T  28490347 catccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgccttgaattttaaattctttaaaaaaatttcaattacctcatcca 28490446  T
Q  161 aacacactct 170  Q
    ||||||||||    
T  28490447 aacacactct 28490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 22304842 - 22304734
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| ||    
T  22304842 catccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctaggattctaaattctttaaaatttcccaattacctcatcaaa 22304743  T
Q  162 acacactct 170  Q
    | |||||||    
T  22304742 atacactct 22304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 37091021 - 37091135
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||| ||| || ||||||||||||||| ||||  |||||||||    
T  37091021 attacttcatccaaacataagtattaagaaatgaaagtaatttaattgaatcattttaattacctagagttctaaattctttaagatttaccaattacct 37091120  T
Q  155 catccaaacacactc 169  Q
    |||||||||||||||    
T  37091121 catccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 6771931 - 6771822
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||| ||| ||| |||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| |||||||||    
T  6771931 catccaaacagaagtattgagaaatgaaaataatttaattgaatcatttgaattgcatagaattctaaattctttaaaatttcccaattaactcatccaa 6771832  T
Q  162 acacactctt 171  Q
    ||||||||||    
T  6771831 acacactctt 6771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14835170 - 14835338
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||| ||| ||| ||||||||||||||| |||||       |||||| |||||||||||||| ||| |||||||| | || |||||    
T  14835170 ccaaaaaattaaaatttacaaaagttgcccaaaaatgatgacaatgaaattttatattactacatccaaacaaaagtattgagaaatgataatattttaa 14835269  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||||||||| |||  | ||||||||||||||||||||| ||||||| | |||||||||||||    
T  14835270 ttgaatcatttaaattacctaaacttctaaattctttaaaatttcccaattactttatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28489841 - 28490009
Alignment:
Q  1 ccaaaaaactaaaatttataaagtttccc-aaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| |||||||||||||  || || |||||||||| |||||||       ||| || |||||||||||||  ||| ||||||||| |||||||||    
T  28489841 ccaaaaaattaaaatttataaaaattgcctaaaaatgatggcgatgaaattttttatttctccatccaaacaaaaatattgagaaatgaacgtaatttaa 28489940  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||||||||||||| | ||||||||||| |||||||||   ||||||||||||||||||||||    
T  28489941 ttgaatcatttaaattgcctaggattctaaattccttaaaattttctaattacctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 33146480 - 33146632
Alignment:
Q  20 aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcct 119  Q
    |||||| ||||||||||||| | |||||       ||| || |||||||||||||  ||| |||||||||||||| |||||||||| |||||||||||||    
T  33146480 aaagttgcccaaaaatgatggcaatgaaattctttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaattgcct 33146579  T
Q  120 tgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
       |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33146580 aagattctaaattctttgaaatttctcaactacctcatccaaacacactctta 33146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 33995612 - 33995435
Alignment:
Q  3 aaaaaactaaaatttataaagttt-cccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||| ||| ||| ||||||||||||||| |||||       |||||| |||||||| ||||| | | ||||||| ||| | |||||||    
T  33995612 aaaaaattaaaatttacaaaatttacccaaaaatgatgacaatgaaattttttattactccatccaaaaaaaagtaatgagaaatggaagcattttaatt 33995513  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaatatt 179  Q
    ||||||||| ||||||||  |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  33995512 gaatcatttgaattgcctaaaattctaatttctttaaaatttgtcaattacatcatccaaacacactctaagagtatt 33995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 15270584 - 15270421
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||| ||| ||||||||||| ||||||| |||||       ||||||  ||||||||||||  ||| ||||||||||| | |||||||    
T  15270584 aaaaaattaaaatttacaaaagtttcccaaaa-tgatgacaatgaaatcttttattactctatccaaacaaaaatattgagaaatgaaagcattttaatt 15270486  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacaca 166  Q
    ||||||||| |||| ||| |||||||||||||||||||||||  |||||||||||| ||||||||    
T  15270485 gaatcatttcaattacctagaattctaaattctttaaaattttccaattacctcattcaaacaca 15270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 15580115 - 15579996
Alignment:
Q  55 attacttcatccaaacaaaa-gaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaatta-c 152  Q
    |||||| ||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||| || ||||| |||||| |||||||||||  ||||| |    
T  15580115 attactccatccaaacaaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtctagaattttaaattttttaaaatttcctaattacc 15580016  T
Q  153 ctcatccaaacacactctta 172  Q
    ||||||||||||||||||||    
T  15580015 ctcatccaaacacactctta 15579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 22303503 - 22303385
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  |||||  |||||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| |||      
T  22303503 attactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatactc 22303404  T
Q  155 catccaaacacactcttag 173  Q
    |||||||||||||||||||    
T  22303403 catccaaacacactcttag 22303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 10315083 - 10315196
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||||||||||||||| |  |||||  |||||||| |||| ||||||||||||| |||| |||  |||||||||||||| |||||||||||||||||     
T  10315083 attacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctataattctaaattcttcaaaatttctcaattaccc 10315182  T
Q  155 catccaaacacact 168  Q
    ||||||||||||||    
T  10315183 catccaaacacact 10315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 37241274 - 37241163
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| ||||||||||| |  ||||||||||||||  ||||||||||||| |||| ||||  || ||||||||||||||| |||||||||||||||||     
T  37241274 attactccatccaaacaataatatttagaaatgaaaacaatttaattgaataatttgaattaactagaattctaaattcttcaaaatttctcaattaccc 37241175  T
Q  155 catccaaacaca 166  Q
    ||||||||||||    
T  37241174 catccaaacaca 37241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13391119 - 13390961
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| |||||       | |||| |||||||||||||| ||| |||||||||||||||||||    
T  13391119 ccaaaaaattaaaatttataaaagttgcccaaaaatgatgacaatgaaattttttagtactccatccaaacaaaagtattgagaaatgaaagtaatttaa 13391020  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 171  Q
                 ||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13391019 -------------attgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacactctt 13390961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 8264880 - 8264996
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||| ||| | |||||| |||||||||||||||||||||||||||| | ||||   |||||||||||||    ||||||| ||    
T  8264880 attactccatccaaacaaaagtattgaaaaatgagagtaatttaattgaatcatttaaattgcttagaatataaaattctttaaaaaaattcaattagct 8264979  T
Q  155 catccaaacacactctt 171  Q
    |||||||||||||||||    
T  8264980 catccaaacacactctt 8264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 35111702 - 35111763
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35111702 aattccctagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttag 35111763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 8255434 - 8255506
Alignment:
Q  98 aattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||||||||||||  |||| ||||||||| ||||||||||||||| |||||||||||| |||||    
T  8255434 aattgaatcatttaaattgcctaaaattataaattcttcaaaatttctcaattatctcatccaaacatactct 8255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 25935209 - 25935151
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25935209 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactct 25935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 38178878 - 38178813
Alignment:
Q  97 taattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||    
T  38178878 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 38206102 - 38206037
Alignment:
Q  97 taattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||    
T  38206102 taattgattcatttaaattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38206037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 12064378 - 12064318
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  12064378 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 12064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 20320589 - 20320526
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||||||| ||||| |||||||||||||||||   |||||||||||||||||||||||||||    
T  20320589 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactcttag 20320526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 30519389 - 30519475
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatt 142  Q
    |||||| || ||||||||||| ||| | ||||||||| |||||||| ||||||||||||||||||  |||| ||||||||||||||||    
T  30519389 attactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 30559729 - 30559815
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatt 142  Q
    |||||| || ||||||||||| ||| | ||||||||| |||||||| ||||||||||||||||||  |||| ||||||||||||||||    
T  30559729 attactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 40089475 - 40089412
Alignment:
Q  107 atttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||||| | | ||||||||||||||||||||  ||||||||||||||||||||||||    
T  40089475 atttaaattgcctaggaatctaaattctttaaaatttcctaattacctcatccaaacacactct 40089412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 9893866 - 9893749
Alignment:
Q  3 aaaaaactaaaatttat-aaagtttcccaaaaatgatgacga---tgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaattta 98  Q
    |||||| |||||||||| ||||||||||||||||||||| ||   ||||       |||||| || ||||||||||| ||| | ||||||||| ||||||    
T  9893866 aaaaaattaaaatttatgaaagtttcccaaaaatgatgatgacattgaaattttttattactccacccaaacaaaagtattgaaaaatgaaagaaattta 9893767  T
Q  99 attgaatcatttaaattg 116  Q
    ||||||||||||||||||    
T  9893766 attgaatcatttaaattg 9893749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 19533827 - 19533769
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  19533827 taaattgcctagaattttaaattctttaaaatttccaaattacctcattcaaacacact 19533769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 31316585 - 31316666
Alignment:
Q  83 aaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaaca 164  Q
    |||||| || ||||||||||||| ||||||||||  | |||||||||||||| ||||| ||  |||||| ||||||||||||    
T  31316585 aaatgagagaaatttaattgaattatttaaattgtttagaattctaaattctataaaaatttccaattaactcatccaaaca 31316666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 31368314 - 31368395
Alignment:
Q  83 aaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaaca 164  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||| | |||||    ||||||| ||||||||||||    
T  31368314 aaatgaaagaaatttaattgaatcatttaaattgtttagaattctaaattttataaaaaaattcaattaactcatccaaaca 31368395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 32317130 - 32317222
Alignment:
Q  77 atttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||  ||||| |||||||| |||| | |||| |  |||| ||||||||||||||||| |||||||||| |||||||||| ||||    
T  32317130 atttagaaatgaagataattcaattgaataatttgacttgcttaaaattttaaattctttaaaattt-tcaattacctaatccaaacactctct 32317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 17492857 - 17492691
Alignment:
Q  3 aaaaaactaaaatttat-aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| |||||||||| ||||||  ||||||||||| || |||||       |||||| || ||||||||||  |||||||||||||   ||| |||||    
T  17492857 aaaaaattaaaatttattaaagttgtccaaaaatgataacaatgaaattttttattactccagccaaacaaaaatatttagaaatgaagacaatgtaatt 17492758  T
Q  102 gaatcatttaaattgccttgaattctaaa-ttctttaaaatttctcaattacctcatccaaacacact 168  Q
     ||| |||| |||||| ||  |||||||| || ||||||||||   ||||||||||||||||||||||    
T  17492757 taataatttgaattgc-ttatattctaaaattttttaaaattttctaattacctcatccaaacacact 17492691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 6955071 - 6955020
Alignment:
Q  121 gaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||||||||||| |||||||||||||  ||| ||||||||| |||||||    
T  6955071 gaattctaaattcttaaaaatttctcaatccccttatccaaacatactctta 6955020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 37722814 - 37722751
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    |||||| ||| ||||| ||||||||||||||||||  ||||||   ||||||||||||||||||    
T  37722814 taaattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactcttag 37722751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 18442938 - 18443038
Alignment:
Q  57 tacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctca 156  Q
    ||||||||||||| ||||  ||||| |||||||   ||||||||||||| |||| ||||     |||||||||||||| ||| ||||| |||||| ||||    
T  18442938 tacttcatccaaataaaaatatttaaaaatgaagacaatttaattgaatgatttgaattaatcagaattctaaattctataagatttcacaattatctca 18443037  T
Q  157 t 157  Q
    |    
T  18443038 t 18443038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 8475510 - 8475678
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| | |  |||||||||||||| |||||       ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  8475510 aaaaaattaaaatttataaaagctgtccaaaaatgatgacaatgaatttttttattactttatccaaacaaaagaattgagaaatgaaagtaatttaatt 8475609  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8475610 gaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatctaaacacactct 8475678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1368853 - 1369027
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnn--attacttcatccaaacaaaagaatttagaaatgaaagtaattt 97  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||| |||||         |||||| |||||||||||||||||| |||||||||||||||||    
T  1368853 ccaaaaaattaaaacttataaaagttgcccaaaaatgatgacaatgaatttttttttattactccatccaaacaaaagaattcagaaatgaaagtaattt 1368952  T
Q  98 aattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1368953 aattgaatcatttaaattacctagaattttaaattctttataatttctcaattacctcgtccaaacacactctta 1369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 15616035 - 15615920
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||  ||| ||||||||||||||||||||||| |||||| ||||||||   ||| ||||||||||||||||| ||||||||||    
T  15616035 attactccatccaaacaaaaatattgagaaatgaaagtaatttaattgattcatttgaattgcctaatattttaaattctttaaaatttatcaattacct 15615936  T
Q  155 catccaaacacactct 170  Q
    ||||||||||||||||    
T  15615935 catccaaacacactct 15615920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 10105448 - 10105556
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||| ||| ||||||||||  | |||||||||||||||  ||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  10105448 atccaaacaaaagtattgagaaatgaaatcattttaattgaatcattggaattgcctacaagtctaaattctttaaaatttctcaattacctcatccaaa 10105547  T
Q  163 cacactctt 171  Q
    |||||||||    
T  10105548 cacactctt 10105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 6357932 - 6357825
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaa 162  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||||||| | |  |||||||||||||| |||||||| |||||||||| ||||||    
T  6357932 atccaaacaaaagtattaagaaatgaaaataatttaattgaatcatttaaattacttaaaattctaaattcttcaaaatttcccaattacctcgtccaaa 6357833  T
Q  163 cacactct 170  Q
    ||||||||    
T  6357832 cacactct 6357825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 28918591 - 28918706
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||| |||||| |||| |||||||||||||| |    
T  28918591 attactccatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcatagaattttaaattatttataatttctcaattactt 28918690  T
Q  155 catccaaacacactct 170  Q
      || |||||||||||    
T  28918691 tgtctaaacacactct 28918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 31413239 - 31413412
Alignment:
Q  1 ccaaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaa 99  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| || ||       |||||||||||||||||| |  |||||  ||| |||| || | ||    
T  31413239 ccaaaaaaataaaatttataaaagttgcccaaaaatgatgacaataaatttttttattacttcatccaaacaataacatttaagaattaaagcaactgaa 31413338  T
Q  100 ttgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttag 173  Q
    || |||||||| |||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  31413339 tttaatcatttgaattccctagaattctaaattcttcaaaatttctcaattaccccatccaaacacacttttag 31413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 1195766 - 1195853
Alignment:
Q  83 aaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||| |||| ||||||||||||| ||||||||||||| |||||  ||||||| |||||||||||||||||||||| ||||||||||||    
T  1195766 aaataaaagcaatttaattgaattatttaaattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactct 1195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 724900 - 724811
Alignment:
Q  81 agaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    ||||||||||| | ||| ||| |||||||| |||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  724900 agaaatgaaagcattttcatttaatcatttgaattacctagaattctaaattcttaaaaaattctcaattacctcatccaaacacactct 724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 34244903 - 34244837
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactcttagaat 176  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34244903 taaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactcttagaat 34244837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 15833070 - 15833154
Alignment:
Q  84 aatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacact 168  Q
    |||||||| ||||||||| |||||||| |||| |||  |||||| ||||||| ||||||||||||||||  ||||||||||||||    
T  15833070 aatgaaagcaatttaattaaatcatttgaattacctaaaattctgaattcttcaaaatttctcaattactccatccaaacacact 15833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 13487425 - 13487487
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    ||||||| || ||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  13487425 taaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctta 13487487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 9697889 - 9697937
Alignment:
Q  122 aattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9697889 aattctaaattctttaaaatttctcaattactccatccaaacacactct 9697937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 34364894 - 34364954
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
    |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  34364894 taaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 34364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 26855578 - 26855480
Alignment:
Q  66 caaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacac 165  Q
    |||||||||||||||| ||||||||| |||||    ||||||||| |  || ||  | |||||||||||| ||||||||||||||| ||||| |||||||    
T  26855578 caaacaaaagaatttataaatgaaagcaattt----gaatcatttgatatgtctaaatttctaaattcttcaaaatttctcaattatctcattcaaacac 26855483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 26901447 - 26901343
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    |||||||||||||  ||||||||| ||||  |||||| ||||||||||| |||||||| |||||| |||   || ||||  | |||||||| ||||||||    
T  26901447 catccaaacaaaaatatttagaaaagaaaaaaatttatttgaatcatttgaattgcctagaattcaaaaaaattcaaaaaatttcaattacttcatccaa 26901348  T
Q  162 acaca 166  Q
    |||||    
T  26901347 acaca 26901343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 29889355 - 29889294
Alignment:
Q  112 aattgccttgaattctaaattctttaaaatttctcaa-ttacctcatccaaacacactctta 172  Q
    |||||||| ||||| ||||||||||||||  | |||| ||||||||||||||||||||||||    
T  29889355 aattgcctagaattttaaattctttaaaaaatttcaaattacctcatccaaacacactctta 29889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 3245 - 3407
Alignment:
Q  10 taaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcat 108  Q
    ||||||||||||| | ||||||||||||||||  |||||       ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  3245 taaaatttataaaaggttcccaaaaatgatgataatgaaattttttattacttcatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcat 3344  T
Q  109 ttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctt 171  Q
    |||||||  ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3345 ttaaattaactaaaattctaaattctttaaaatttctcaattacctcatccaaagacactctt 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 4418 - 4568
Alignment:
Q  20 aaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcct 119  Q
    |||||| ||||||||||||||| |||||       |||||| |||||||||||||| ||| ||||||||||| | ||||| |||||||||||||||||||    
T  4418 aaagttgcccaaaaatgatgacaatgaaatttttgattactccatccaaacaaaagtattgagaaatgaaagcattttaaatgaatcatttaaattgcct 4517  T
Q  120 tgaattctaaattctttaaaatttctcaattacctcatccaaacacactct 170  Q
     |||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  4518 agaattctaaattctttaaaatttcccaattagttcatccaaacacactct 4568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 19475 - 19333
Alignment:
Q  3 aaaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaatt 101  Q
    |||||| ||||||||||||| | | ||||||||||||||| |||||       |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  19475 aaaaaattaaaatttataaaagctgcccaaaaatgatgacaatgaaattttttattactccatccaaacaaaagtattgagaaatgaaagtaatttaatt 19376  T
Q  102 gaatcatttaaattgccttgaattctaaattctttaaaatttc 144  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  19375 gaatcatttaaattgcctaaaattctaaattctttaaaatttc 19333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 11611 - 11499
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||| ||||||||| ||| | ||||||||||||||||||| ||||||||||||| | | |||||||||||||||||||||||  ||| |||||    
T  11611 attactccatctaaacaaaagtattgacaaatgaaagtaatttaattaaatcatttaaattacttagaattctaaattctttaaaattttccaaatacct 11512  T
Q  155 catccaaacacac 167  Q
    |||||||||||||    
T  11511 catccaaacacac 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 49944 - 49838
Alignment:
Q  62 catccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaa 161  Q
    ||||||||||| |  |||||| ||||||| ||||||||||||||||||| | || |||| |||||||||||||| ||||||||||||||||  |||||||    
T  49944 catccaaacaataatatttaggaatgaaattaatttaattgaatcatttgagttaccttaaattctaaattcttcaaaatttctcaattactccatccaa 49845  T
Q  162 acacact 168  Q
    |||||||    
T  49844 acacact 49838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 15601 - 15500
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| || ||||||||||| ||  ||||||||||| ||||| |||||||||||||||| | || ||||| |||||||||||||||||| |||||||||    
T  15601 attactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacct 15502  T
Q  155 ca 156  Q
    ||    
T  15501 ca 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 16044 - 15959
Alignment:
Q  63 atccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaa 148  Q
    |||||||||| |  |||||  |||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  16044 atccaaacaataatatttaagaatgaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 15959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 2643 - 2542
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| || ||||||||||| ||  ||||||||||| ||||| |||||||||||||||| | || ||||| |||||||||||||||||| |||||||||    
T  2643 attactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaattacct 2544  T
Q  155 ca 156  Q
    ||    
T  2543 ca 2542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 3056 - 3001
Alignment:
Q  93 aatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaa 148  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  3056 aatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaa 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 4187 - 4018
Alignment:
Q  4 aaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    ||||| ||||||||||||| ||| ||||||||||||||| || ||       |||||| ||||||||||| |  |||||  |||||||| ||||||||||    
T  4187 aaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattg 4088  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||| |||  ||| ||||||||||||||| ||||  | |||| |||  ||||||||||||||||||    
T  4087 aatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactctta 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 4831 - 4662
Alignment:
Q  4 aaaaactaaaatttataaa-gtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattg 102  Q
    ||||| ||||||||||||| ||| ||||||||||||||| || ||       |||||| ||||||||||| |  |||||  |||||||| ||||||||||    
T  4831 aaaaattaaaatttataaaagttgcccaaaaatgatgacaataaatttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattg 4732  T
Q  103 aatcatttaaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactctta 172  Q
    |||||||| |||  ||| ||||||||||||||| ||||  | |||| |||  ||||||||||||||||||    
T  4731 aatcatttgaataacctagaattctaaattcttcaaaaaatttcaaatactccatccaaacacactctta 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 130682 - 130793
Alignment:
Q  55 attacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgccttgaattctaaattctttaaaatttctcaattacct 154  Q
    |||||| |||| ||||||||  ||||| |||| | || |||||||||||||||||||||||| ||  |||||||||||||| |||||||  || ||||||    
T  130682 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattttccatttacct 130781  T
Q  155 catccaaacaca 166  Q
    ||| ||||||||    
T  130782 catacaaacaca 130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 223466 - 223398
Alignment:
Q  10 taaaatttataaagtttcccaaaaatgatgacgatgaannnnnnnattacttcatccaaacaaaagaat 78  Q
    |||||||||||||||| ||||||||||||||| |||||       ||||||||||||||||||||||||    
T  223466 taaaatttataaagttgcccaaaaatgatgacaatgaatttttttattacttcatccaaacaaaagaat 223398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 11319 - 11378
Alignment:
Q  110 taaattgccttgaattctaaattctttaaaatttctcaattacctcatccaaacacactc 169  Q
    ||||||||||  |||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  11319 taaattgcctaaaattttaaattctttacaatttccaaattacctcatccaaacacactc 11378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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