View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9150_low_40 (Length: 446)
Name: NF9150_low_40
Description: NF9150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9150_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 30617804 - 30617389
Alignment:
| Q |
1 |
tggttatggaggaaatggtggatatatgattccaatggctattgcaaatgatggtaaccaaaatccaagaagcaacaacaattttggtgagagtgagatt |
100 |
Q |
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| T |
30617804 |
tggttatggaggaaatggtggatatatgattccaatggctattgcaaatgatggtaaccaaaatccaagaagcaacaacaattttggtgagagtgagatt |
30617705 |
T |
|
| Q |
101 |
aaaggatttggttatgaaaatgtttttgggactactactgatccttatcatgcacaggcagcaaggaacttgtactatcagccacaacaattatctgttg |
200 |
Q |
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| T |
30617704 |
aaaggatttggttatgaaaatgtttttgggactactactgatccttatcatgcacaggcagcaaggaacttgtactatcagccacaacaattatctgttg |
30617605 |
T |
|
| Q |
201 |
atcaaggatcaaattgggttccaactgctattccaacacttgctccaaggactaccaatgtctctctttgtcctcctttcactttgttgcatgaatagat |
300 |
Q |
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| T |
30617604 |
atcaaggatcaaattgggttccaactgctattccaacacttgctccaaggactaccaatgtctctctatgtcctcctttcactttgttgcatgaatagat |
30617505 |
T |
|
| Q |
301 |
gatttgagagtgaagaaagtgt-gtcatcaaggtgcaaaatgatgtattggcatgtatcttgaagaaggaagataatttataggttttatttcattttaa |
399 |
Q |
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| T |
30617504 |
gatttgagaatgaagaaagtgtcatcatcaaggtgcaaaatgatgcattggcatgtatcttgaagaaggaagatagtttataggttttatttcattttaa |
30617405 |
T |
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| Q |
400 |
tttggaagggttatta |
415 |
Q |
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| T |
30617404 |
tttggaagggttatta |
30617389 |
T |
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