View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9150_low_67 (Length: 290)
Name: NF9150_low_67
Description: NF9150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9150_low_67 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 37029261 - 37029007
Alignment:
| Q |
26 |
gttaacacggtaaaaaagaaaatacggatgtgtgtcctcttggtgttcatctgcagcaccaataaataacttttgctttcttaggatataatttaaagaa |
125 |
Q |
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| T |
37029261 |
gttaacacggtaaaaaagaaaatacggatgtgtgtcctcttggtgttcatctgcagcaccaataaataacttttgctttcttaggatataatttaaagaa |
37029162 |
T |
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| Q |
126 |
tttatcgaaataaactaaaaataacttataaatatgtgcaaagacttcctgagttttctcaaacactctaaaagtggtttacgtccgttgataaactcaa |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37029161 |
tttatcgaaataaactaaaaataacttataaatatgtgcaaagactttctgagttttctcaaacactctaaaagtggtttacgtccgttgataaactcaa |
37029062 |
T |
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| Q |
226 |
aaataaaaagttcataaattaatacaatcacatcctttgttaggcacaggttctg |
280 |
Q |
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| T |
37029061 |
aaataaaaagttcataaattaatacaatcacatcctttgttaggcataggttctg |
37029007 |
T |
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